View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13777_high_107 (Length: 203)
Name: NF13777_high_107
Description: NF13777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13777_high_107 |
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Alignment Details
Target: chr4 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 43803290 - 43803120
Alignment:
| Q |
17 |
aaaatcgctaattccttaggtggttaattattaggcaaaacattaagaatatcgatttttaagaacacataatcatatttcaatattcctatggcaaaga |
116 |
Q |
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| T |
43803290 |
aaaatcgctaattccttaggtggttaattattaggcagaacattaagaatatcgatttttaagaacacataatcatatttcaatattcctatggcaaaga |
43803191 |
T |
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| Q |
117 |
atctcaatttttggttattactactcatctcccaatggcaaaacaatctcaaattcaattcaagaacaatc |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
43803190 |
atctcaatttttggttattactactcatctcccaatggcaagacaatctcaaattcaattcaagaacaatc |
43803120 |
T |
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