View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13777_high_3 (Length: 618)

Name: NF13777_high_3
Description: NF13777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13777_high_3
NF13777_high_3
[»] chr7 (39 HSPs)
chr7 (1-321)||(7935818-7936137)
chr7 (503-602)||(7935727-7935826)
chr7 (4-95)||(28198004-28198095)
chr7 (7-93)||(35116889-35116975)
chr7 (397-504)||(5409769-5409875)
chr7 (397-504)||(9778520-9778626)
chr7 (13-92)||(36721167-36721246)
chr7 (5-95)||(18797794-18797884)
chr7 (397-502)||(24339662-24339772)
chr7 (397-502)||(43027404-43027508)
chr7 (11-95)||(6727604-6727687)
chr7 (384-436)||(39138451-39138503)
chr7 (402-453)||(11272569-11272620)
chr7 (8-95)||(30080125-30080211)
chr7 (395-441)||(22602705-22602751)
chr7 (411-453)||(26329365-26329407)
chr7 (395-453)||(32308138-32308196)
chr7 (413-502)||(1433490-1433578)
chr7 (411-452)||(6630896-6630937)
chr7 (412-453)||(15902857-15902898)
chr7 (420-499)||(8842282-8842355)
chr7 (411-502)||(25822689-25822785)
chr7 (39-95)||(40198858-40198914)
chr7 (398-453)||(3142061-3142116)
chr7 (395-442)||(5548694-5548741)
chr7 (391-442)||(7758336-7758387)
chr7 (436-502)||(18212973-18213044)
chr7 (389-436)||(18213033-18213080)
chr7 (8-87)||(35494665-35494744)
chr7 (448-502)||(598273-598327)
chr7 (412-454)||(8160451-8160493)
chr7 (397-502)||(32093954-32094059)
chr7 (436-498)||(40287306-40287368)
chr7 (412-441)||(7328686-7328715)
chr7 (395-436)||(9482952-9482993)
chr7 (395-451)||(3520327-3520383)
chr7 (397-445)||(18039019-18039067)
chr7 (414-442)||(21138990-21139018)
chr7 (395-447)||(23128650-23128702)
[»] chr6 (44 HSPs)
chr6 (383-504)||(18367842-18367968)
chr6 (383-502)||(16488519-16488643)
chr6 (390-504)||(17327588-17327701)
chr6 (397-502)||(9107299-9107409)
chr6 (395-504)||(10339052-10339167)
chr6 (383-502)||(13789160-13789273)
chr6 (383-502)||(13797779-13797892)
chr6 (397-502)||(16766717-16766827)
chr6 (411-500)||(12696358-12696446)
chr6 (413-504)||(8365446-8365542)
chr6 (395-453)||(26562707-26562765)
chr6 (395-456)||(9617452-9617513)
chr6 (389-453)||(4388097-4388161)
chr6 (414-453)||(10294144-10294183)
chr6 (411-458)||(34384953-34385000)
chr6 (438-499)||(7996325-7996387)
chr6 (438-499)||(8022414-8022476)
chr6 (448-502)||(34595199-34595253)
chr6 (398-502)||(7248379-7248488)
chr6 (395-440)||(9025490-9025535)
chr6 (412-453)||(9195737-9195778)
chr6 (448-501)||(31384995-31385048)
chr6 (47-98)||(30326699-30326750)
chr6 (411-446)||(34073337-34073372)
chr6 (436-505)||(4877991-4878064)
chr6 (395-445)||(7723241-7723291)
chr6 (448-501)||(9658944-9658998)
chr6 (470-504)||(10649375-10649409)
chr6 (36-90)||(24093827-24093880)
chr6 (456-502)||(34446644-34446690)
chr6 (395-436)||(7265593-7265634)
chr6 (395-436)||(8022382-8022423)
chr6 (395-502)||(9629401-9629513)
chr6 (411-452)||(28862156-28862197)
chr6 (397-453)||(5970091-5970147)
chr6 (397-453)||(8714000-8714056)
chr6 (448-504)||(8776906-8776962)
chr6 (397-449)||(9522911-9522963)
chr6 (397-453)||(11424694-11424750)
chr6 (8-60)||(17590296-17590348)
chr6 (412-452)||(21395292-21395332)
chr6 (7-55)||(24265203-24265251)
chr6 (436-499)||(32978842-32978910)
chr6 (448-504)||(33001227-33001283)
[»] chr5 (42 HSPs)
chr5 (384-501)||(6401505-6401627)
chr5 (383-502)||(21814267-21814391)
chr5 (10-95)||(4822528-4822613)
chr5 (385-499)||(19452998-19453117)
chr5 (397-503)||(37328774-37328883)
chr5 (395-501)||(3966521-3966632)
chr5 (5-96)||(5682320-5682411)
chr5 (412-503)||(14873552-14873642)
chr5 (411-501)||(21542064-21542159)
chr5 (432-494)||(17088340-17088402)
chr5 (448-502)||(21576685-21576739)
chr5 (47-97)||(24111569-24111619)
chr5 (448-498)||(30098982-30099032)
chr5 (397-502)||(39698561-39698671)
chr5 (414-502)||(32766872-32766965)
chr5 (383-432)||(39758278-39758327)
chr5 (411-502)||(21522784-21522880)
chr5 (411-502)||(21533350-21533446)
chr5 (35-95)||(26449261-26449321)
chr5 (1-95)||(9764966-9765061)
chr5 (397-502)||(7677725-7677835)
chr5 (414-499)||(18592110-18592200)
chr5 (5-79)||(34103305-34103378)
chr5 (412-453)||(11685974-11686014)
chr5 (383-435)||(32426870-32426922)
chr5 (398-453)||(6035503-6035558)
chr5 (395-502)||(35017055-35017162)
chr5 (395-450)||(41091243-41091298)
chr5 (46-92)||(2220771-2220817)
chr5 (13-95)||(7112358-7112440)
chr5 (1-95)||(9857803-9857896)
chr5 (395-500)||(19579719-19579829)
chr5 (453-495)||(32426832-32426874)
chr5 (7-93)||(38328661-38328747)
chr5 (1-90)||(1863137-1863226)
chr5 (5-86)||(8611751-8611832)
chr5 (397-502)||(31084343-31084447)
chr5 (1-93)||(844736-844828)
chr5 (395-439)||(6471886-6471930)
chr5 (395-435)||(15086489-15086529)
chr5 (45-93)||(19608806-19608854)
chr5 (451-503)||(23289997-23290049)
[»] chr1 (51 HSPs)
chr1 (383-504)||(25934622-25934748)
chr1 (1-98)||(17630283-17630381)
chr1 (383-501)||(10577676-10577788)
chr1 (5-95)||(30984521-30984611)
chr1 (397-502)||(47989517-47989627)
chr1 (1-95)||(39527025-39527119)
chr1 (395-453)||(44482248-44482306)
chr1 (397-504)||(9828064-9828176)
chr1 (39-95)||(16966549-16966605)
chr1 (397-500)||(1486646-1486748)
chr1 (420-502)||(41597410-41597497)
chr1 (397-502)||(5944303-5944413)
chr1 (411-500)||(17778580-17778670)
chr1 (395-453)||(25361904-25361962)
chr1 (448-502)||(32461393-32461447)
chr1 (5-95)||(34040747-34040836)
chr1 (395-449)||(34371731-34371785)
chr1 (397-497)||(9629834-9629939)
chr1 (412-504)||(40917784-40917881)
chr1 (2-98)||(52698458-52698554)
chr1 (389-436)||(30749852-30749899)
chr1 (389-436)||(30771303-30771350)
chr1 (412-502)||(34712323-34712407)
chr1 (412-502)||(15449170-15449256)
chr1 (411-490)||(6612112-6612196)
chr1 (395-443)||(38503338-38503386)
chr1 (390-501)||(45534131-45534236)
chr1 (5-96)||(51139245-51139337)
chr1 (453-504)||(15765828-15765879)
chr1 (397-452)||(31694694-31694749)
chr1 (448-503)||(37598896-37598951)
chr1 (397-436)||(52903269-52903308)
chr1 (411-453)||(5376483-5376525)
chr1 (46-96)||(10474417-10474467)
chr1 (411-453)||(21038117-21038159)
chr1 (383-453)||(34315718-34315788)
chr1 (1-95)||(37599619-37599713)
chr1 (397-439)||(48148034-48148076)
chr1 (1-90)||(2570979-2571067)
chr1 (395-440)||(7918207-7918252)
chr1 (448-501)||(12919010-12919063)
chr1 (449-502)||(18337395-18337448)
chr1 (395-440)||(20157346-20157391)
chr1 (391-436)||(39130767-39130812)
chr1 (448-501)||(48415667-48415719)
chr1 (39-84)||(51972102-51972147)
chr1 (436-502)||(52903297-52903365)
chr1 (1-93)||(7444945-7445037)
chr1 (45-93)||(26478065-26478113)
chr1 (397-453)||(28273071-28273127)
chr1 (38-98)||(32003038-32003098)
[»] chr4 (35 HSPs)
chr4 (383-502)||(5414101-5414225)
chr4 (2-95)||(4197190-4197283)
chr4 (1-95)||(13414257-13414351)
chr4 (411-501)||(30982808-30982903)
chr4 (14-95)||(33873860-33873941)
chr4 (395-466)||(40742609-40742680)
chr4 (11-95)||(26184607-26184691)
chr4 (391-502)||(46083920-46084036)
chr4 (397-499)||(28084542-28084640)
chr4 (397-453)||(22234873-22234929)
chr4 (395-505)||(24613627-24613742)
chr4 (36-87)||(36832840-36832890)
chr4 (389-452)||(44132628-44132691)
chr4 (448-502)||(715545-715599)
chr4 (448-502)||(752871-752925)
chr4 (448-502)||(23292926-23292980)
chr4 (5-67)||(26659778-26659840)
chr4 (8-93)||(32536869-32536954)
chr4 (436-502)||(42640577-42640643)
chr4 (449-502)||(18966575-18966628)
chr4 (412-453)||(19500841-19500882)
chr4 (39-95)||(33881889-33881945)
chr4 (416-451)||(4100003-4100038)
chr4 (413-468)||(50280919-50280973)
chr4 (411-501)||(3947702-3947791)
chr4 (448-502)||(19097835-19097888)
chr4 (9-95)||(43921089-43921175)
chr4 (6-80)||(48051717-48051791)
chr4 (395-440)||(7970537-7970582)
chr4 (411-444)||(46160930-46160963)
chr4 (421-453)||(5225596-5225628)
chr4 (448-504)||(19482744-19482800)
chr4 (45-93)||(37626971-37627019)
chr4 (35-87)||(38868878-38868930)
chr4 (15-95)||(56128591-56128671)
[»] scaffold0623 (1 HSPs)
scaffold0623 (384-501)||(5926-6048)
[»] chr2 (45 HSPs)
chr2 (383-502)||(36096304-36096428)
chr2 (1-95)||(39575463-39575557)
chr2 (384-502)||(34784911-34785034)
chr2 (1-95)||(3855978-3856072)
chr2 (397-504)||(37419763-37419875)
chr2 (383-502)||(24009302-24009414)
chr2 (389-453)||(18054786-18054850)
chr2 (395-502)||(35056886-35056998)
chr2 (397-502)||(30717459-30717569)
chr2 (384-502)||(41843448-41843565)
chr2 (15-90)||(3773035-3773110)
chr2 (411-502)||(11223793-11223888)
chr2 (395-502)||(32749754-32749866)
chr2 (5-60)||(33058797-33058852)
chr2 (413-502)||(26769547-26769641)
chr2 (35-95)||(6913422-6913481)
chr2 (7-91)||(12880117-12880201)
chr2 (384-436)||(20242727-20242779)
chr2 (5-95)||(306151-306240)
chr2 (436-495)||(21624315-21624374)
chr2 (411-501)||(44860354-44860449)
chr2 (448-502)||(18054716-18054770)
chr2 (417-502)||(42511322-42511411)
chr2 (397-453)||(19614203-19614259)
chr2 (397-436)||(34691805-34691844)
chr2 (397-436)||(34714217-34714256)
chr2 (449-503)||(20242666-20242720)
chr2 (395-502)||(24975255-24975366)
chr2 (397-502)||(28412370-28412476)
chr2 (398-452)||(28524447-28524501)
chr2 (395-441)||(30527590-30527636)
chr2 (9-83)||(41311737-41311811)
chr2 (436-500)||(2438661-2438730)
chr2 (412-453)||(4207892-4207932)
chr2 (395-452)||(18889575-18889632)
chr2 (4-57)||(29735728-29735781)
chr2 (449-502)||(38117099-38117152)
chr2 (397-453)||(4882679-4882735)
chr2 (397-453)||(6045899-6045955)
chr2 (411-443)||(12668416-12668448)
chr2 (437-500)||(19942314-19942382)
chr2 (395-452)||(22084814-22084873)
chr2 (397-445)||(23058433-23058481)
chr2 (452-504)||(34006928-34006980)
chr2 (4-95)||(37534453-37534545)
[»] chr8 (33 HSPs)
chr8 (383-502)||(34450961-34451090)
chr8 (383-501)||(43737752-43737864)
chr8 (1-95)||(7176522-7176617)
chr8 (394-502)||(26902104-26902217)
chr8 (397-504)||(29510231-29510343)
chr8 (10-98)||(6938982-6939070)
chr8 (1-93)||(31087102-31087194)
chr8 (416-502)||(22652015-22652106)
chr8 (395-501)||(29447040-29447151)
chr8 (384-502)||(18964184-18964309)
chr8 (395-502)||(11803277-11803389)
chr8 (11-95)||(38842891-38842975)
chr8 (412-502)||(15816058-15816153)
chr8 (412-502)||(29447479-29447574)
chr8 (47-94)||(42964814-42964861)
chr8 (448-502)||(3951476-3951530)
chr8 (397-502)||(21465432-21465542)
chr8 (397-446)||(11927076-11927125)
chr8 (416-504)||(33389293-33389381)
chr8 (436-503)||(8343020-8343087)
chr8 (395-450)||(14634127-14634182)
chr8 (419-502)||(16641909-16641991)
chr8 (414-453)||(25172681-25172720)
chr8 (411-454)||(28384976-28385019)
chr8 (397-435)||(3951537-3951575)
chr8 (412-453)||(2572039-2572080)
chr8 (395-436)||(4786338-4786379)
chr8 (10-87)||(42350422-42350499)
chr8 (448-500)||(926730-926782)
chr8 (448-500)||(3025616-3025668)
chr8 (411-439)||(11944699-11944727)
chr8 (395-435)||(12606830-12606870)
chr8 (36-88)||(45183587-45183639)
[»] chr3 (40 HSPs)
chr3 (1-95)||(31375529-31375623)
chr3 (385-502)||(13845465-13845576)
chr3 (383-437)||(14028013-14028067)
chr3 (395-451)||(8039820-8039876)
chr3 (391-504)||(14209127-14209245)
chr3 (413-505)||(41961576-41961673)
chr3 (390-502)||(35222951-35223057)
chr3 (397-502)||(34185052-34185162)
chr3 (395-507)||(10455808-10455920)
chr3 (3-98)||(31732064-31732160)
chr3 (1-56)||(11434826-11434881)
chr3 (397-507)||(15796218-15796333)
chr3 (430-501)||(15864880-15864950)
chr3 (394-436)||(2941575-2941617)
chr3 (397-451)||(16789032-16789086)
chr3 (448-502)||(20503530-20503584)
chr3 (8-90)||(21346910-21346991)
chr3 (412-502)||(27505281-27505370)
chr3 (5-83)||(42983913-42983991)
chr3 (448-501)||(15999951-16000004)
chr3 (397-500)||(4987222-4987330)
chr3 (448-500)||(28918068-28918120)
chr3 (38-94)||(32978099-32978155)
chr3 (411-463)||(36272555-36272607)
chr3 (436-506)||(40993271-40993346)
chr3 (36-90)||(9596338-9596392)
chr3 (386-436)||(13414478-13414528)
chr3 (411-445)||(13806270-13806304)
chr3 (411-453)||(16192733-16192775)
chr3 (397-451)||(17005604-17005658)
chr3 (47-93)||(26554236-26554282)
chr3 (411-453)||(29386494-29386536)
chr3 (448-502)||(55401140-55401194)
chr3 (395-436)||(8383275-8383316)
chr3 (395-436)||(25093520-25093561)
chr3 (451-504)||(40052380-40052433)
chr3 (412-440)||(25211574-25211602)
chr3 (10-98)||(31844959-31845047)
chr3 (3-79)||(45153551-45153627)
chr3 (22-86)||(48600645-48600709)
[»] scaffold0116 (1 HSPs)
scaffold0116 (383-443)||(9904-9964)
[»] scaffold0380 (1 HSPs)
scaffold0380 (448-504)||(8666-8722)
[»] scaffold0003 (1 HSPs)
scaffold0003 (412-502)||(241629-241724)
[»] scaffold0036 (1 HSPs)
scaffold0036 (411-500)||(9678-9772)
[»] scaffold0123 (1 HSPs)
scaffold0123 (395-452)||(44509-44566)
[»] scaffold0044 (1 HSPs)
scaffold0044 (395-495)||(53198-53303)
[»] scaffold0019 (1 HSPs)
scaffold0019 (397-504)||(71745-71857)
[»] scaffold0793 (1 HSPs)
scaffold0793 (448-502)||(4821-4875)
[»] scaffold0171 (2 HSPs)
scaffold0171 (397-453)||(23531-23587)
scaffold0171 (397-442)||(23440-23485)
[»] scaffold0136 (1 HSPs)
scaffold0136 (397-503)||(3777-3888)
[»] scaffold0020 (2 HSPs)
scaffold0020 (395-453)||(137798-137856)
scaffold0020 (395-440)||(135308-135353)
[»] scaffold0009 (1 HSPs)
scaffold0009 (5-55)||(104562-104612)
[»] scaffold0008 (1 HSPs)
scaffold0008 (411-453)||(263355-263397)
[»] scaffold0450 (1 HSPs)
scaffold0450 (426-502)||(8564-8645)
[»] scaffold0306 (1 HSPs)
scaffold0306 (448-505)||(13471-13528)
[»] scaffold0168 (3 HSPs)
scaffold0168 (416-453)||(21082-21119)
scaffold0168 (416-453)||(21211-21248)
scaffold0168 (416-453)||(21340-21377)
[»] scaffold0152 (1 HSPs)
scaffold0152 (448-505)||(21799-21856)
[»] scaffold0475 (1 HSPs)
scaffold0475 (459-503)||(3384-3428)
[»] scaffold0279 (1 HSPs)
scaffold0279 (413-453)||(17863-17903)
[»] scaffold0154 (1 HSPs)
scaffold0154 (417-453)||(13453-13489)


Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 7936137 - 7935818
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaattcccnn 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||      
T  7936137 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgcagaaatagttcatttttgaagtttcaatgtgttgaatacacaattcccaa 7936038  T
Q  101 nnnnnnngttttcttttcggacttctgaacacacttgttagcatttcccaatttatttcttgacatggtgtagttggtgataccattcagatggctttaa 200  Q
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7936037 aaaaaa-gtttccttttcggacttctgaacacacttgttagcatttcccaatttatttcttgacatggtgtagttggtgataccattcagatggctttaa 7935939  T
Q  201 gaccattgctgtaatatcaatttgcagtatacttcagtcagtcatgcacttagtgaactaataatgttggatgaagcatgcagagtgcatccttataatt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7935938 gaccattgctgtaatatcaatttgcagtatacttcagtcagtcatgcacttagtgaactaataatgttggatgaagcatgcagagtgcatccttataatt 7935839  T
Q  301 tagatctgtagtgtactaatc 321  Q
    |||||||||||||||||||||    
T  7935838 tagatctgtagtgtactaatc 7935818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 503 - 602
Target Start/End: Complemental strand, 7935826 - 7935727
Alignment:
Q  503 gtactaatcaatctctgagaacccattatgtgtctgggtttagaatctagtgcatctatttgtctgtgggattagaatctagtgtatctatttgtgtctg 602  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7935826 gtactaatcaatctctgagaacccattatgtgtctgggtttagaatctagtgcatctatttgtctgtgggattagaatctagtgtatctatttgtgtctg 7935727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 28198004 - 28198095
Alignment:
Q  4 gcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    |||||||||||||||||||||||||||||  ||||||||  ||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  28198004 gcacttgttaaggattcaaaagaggaaataatttataaaatttatgtagaaaaagtttctttttgaagtttcaatgtcttgaatacacaatt 28198095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 35116975 - 35116889
Alignment:
Q  7 cttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaa 93  Q
    |||||||||||||||||| |||||||  ||||||||| ||||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  35116975 cttgttaaggattcaaaaaaggaaataatttataaattttatgtagaaaaatttcctttttgaagtttcaatgtattgaatacacaa 35116889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 397 - 504
Target Start/End: Complemental strand, 5409875 - 5409769
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgct 496  Q
    ||||||| | ||| ||||| ||||| | ||||||||||||||||||   || ||||||||| ||||| |||| |||||| |||| |||||||||||||||    
T  5409875 aaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacg-acacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgct 5409777  T
Q  497 tcataggt 504  Q
    ||||||||    
T  5409776 tcataggt 5409769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 397 - 504
Target Start/End: Original strand, 9778520 - 9778626
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgct 496  Q
    ||||||| | ||| |||| |||||| | ||||||||||||||||||   |  ||||||||| ||||| |||| |||||| ||||||||||||||||||||    
T  9778520 aaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggacaca-acacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgct 9778618  T
Q  497 tcataggt 504  Q
    ||||||||    
T  9778619 tcataggt 9778626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 36721167 - 36721246
Alignment:
Q  13 aaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacaca 92  Q
    |||||||||||||||||||||  |||||| | ||||||| ||||||||| ||||| || ||| |||||||||||||||||    
T  36721167 aaggattcaaaagaggaaatgacttataagttttatgtataaaaagttctttttttaaatttaaatgtgttgaatacaca 36721246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 18797794 - 18797884
Alignment:
Q  5 cacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    |||| ||||||||||||||| || ||||| ||||||||| |||||||  ||| |||| ||||| ||||||||||  |||||||||||||||    
T  18797794 cactagttaaggattcaaaaaagaaaatgatttataaattttatgtaataaatgttctttttttaagtttcaatacgttgaatacacaatt 18797884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 24339662 - 24339772
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| | ||| ||||||||||| | |||||||||||||||||||||||||||||     | || ||||| |||| |||||| |||| ||||||| ||    
T  24339662 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgccc 24339761  T
Q  492 gtgcttcatag 502  Q
    |||||||||||    
T  24339762 gtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 43027508 - 43027404
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgct 496  Q
    ||||||| | |||||||||||| || | |||||||||||||||| |   || ||||||||| ||||| |||| |||||| |||| | |||||||||||||    
T  43027508 aaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacg-acacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgct 43027410  T
Q  497 tcatag 502  Q
    ||||||    
T  43027409 tcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 6727604 - 6727687
Alignment:
Q  11 ttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||| ||||||||||| ||||  |||| |||| ||||||||||||| ||| ||| | |||||||||| ||||||||||||||||    
T  6727604 ttaagaattcaaaagagaaaattattta-aaattttatgtagaaaaaattcttttattaagtttcaatctgttgaatacacaatt 6727687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 39138451 - 39138503
Alignment:
Q  384 ctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    |||||||||||||||||||| | ||| |||||||||||||| |||||||||||    
T  39138451 ctaaattttttagaaaatcacataattcagtgtaattatatatgtcggtgtcg 39138503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 11272620 - 11272569
Alignment:
Q  402 cataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    |||| ||| ||||||||||| | |||||||||||||||||||||||||||||    
T  11272620 catataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacg 11272569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 30080125 - 30080211
Alignment:
Q  8 ttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    |||||||||||| || |||  ||||  |||| |||| |||||||||||||||||| |||| |||||| ||||||||||||||| ||||    
T  30080125 ttgttaaggatttaagagaaaaaataatttagaaattttatgtagaaaaagttca-ttttaaagttttaatgtgttgaatacataatt 30080211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 441
Target Start/End: Complemental strand, 22602751 - 22602705
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcg 441  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||    
T  22602751 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcg 22602705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 26329407 - 26329365
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  26329407 cagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacg 26329365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 32308138 - 32308196
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||| | ||| |||||||||| |||||||| ||||||||||||||| |||||||    
T  32308138 agaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacg 32308196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 413 - 502
Target Start/End: Original strand, 1433490 - 1433578
Alignment:
Q  413 gtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||||||||||||||||||||||||     |||| ||||| |||||  ||| ||| || |||| |||||||||||||||||||||    
T  1433490 gtgtaattatatgtgtcggtgtcgtgtcgg-acaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 411 - 452
Target Start/End: Complemental strand, 6630937 - 6630896
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 452  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  6630937 cagtgtaattatatgtgtcgatgtcgtgttggtgtcggacac 6630896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 15902857 - 15902898
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  15902857 agtgtaattatatgtgtcggtgttgtgtcggtatcggacacg 15902898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 499
Target Start/End: Complemental strand, 8842355 - 8842282
Alignment:
Q  420 tatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttca 499  Q
    |||||||||| ||||| ||||||||| |||||||      |||| |||| |||||| |||||||||||||||||||||||    
T  8842355 tatatgtgtcagtgtcttgtcggtgttggacacg------acaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 411 - 502
Target Start/End: Original strand, 25822689 - 25822785
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||||| | ||||||||||||| ||||| |||     |||||||||||||||  |||| | |||| ||| |||||||||||||| |||||||    
T  25822689 cagtgtaattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcatag 25822785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 40198914 - 40198858
Alignment:
Q  39 taaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||||||| |||| |||  ||||| ||||||||| |||||||||||||||||    
T  40198914 taaatcttatgtaaaaaatgttactttttaaagtttcaacgtgttgaatacacaatt 40198858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 453
Target Start/End: Complemental strand, 3142116 - 3142061
Alignment:
Q  398 aaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    |||||||| ||| || |||||| |||||||||||||| ||||||||| ||||||||    
T  3142116 aaatcatataattcaatgtaatcatatgtgtcggtgttgtgtcggtgccggacacg 3142061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 442
Target Start/End: Original strand, 5548694 - 5548741
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcgg 442  Q
    ||||||||| | ||| ||||||||||||||||||| ||||||||||||    
T  5548694 agaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgtcgg 5548741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 442
Target Start/End: Original strand, 7758336 - 7758387
Alignment:
Q  391 ttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcgg 442  Q
    ||||||||||| ||| ||| |||| ||||||| |||||||||||||||||||    
T  7758336 ttttagaaaattatataattcagtataattatgtgtgtcggtgtcgtgtcgg 7758387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 502
Target Start/End: Complemental strand, 18213044 - 18212973
Alignment:
Q  436 gtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||||||||||||     | |||||||| |||| ||||||||||| ||||||||| |||||||||||    
T  18213044 gtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtgcttcatag 18212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 436
Target Start/End: Complemental strand, 18213080 - 18213033
Alignment:
Q  389 ttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||||||||| | |||  |||||||||||||||||||||||||    
T  18213080 ttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcg 18213033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 35494665 - 35494744
Alignment:
Q  8 ttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaat 87  Q
    ||||||||||||||| ||| |||||  || |||||| |||| || ||||||||  |||||||| ||||||||| ||||||    
T  35494665 ttgttaaggattcaatagaagaaataattcataaattttatataaaaaaagtttctttttgaaatttcaatgttttgaat 35494744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 448 - 502
Target Start/End: Original strand, 598273 - 598327
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||| ||||| |||| |||||| |||| || ||||||||||||||||||    
T  598273 gacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 454
Target Start/End: Original strand, 8160451 - 8160493
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgt 454  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||    
T  8160451 agtgtaattatatgtgttggtatcgtgtcggtgtcgaacacgt 8160493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 32094059 - 32093954
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacaggg-atacgccttatccaaggagtgtccgtgc 495  Q
    ||||||| | ||| ||||||||||| |  |||||||||||||||||   || ||||||||| ||||| ||| | |||||| |||| |||||||| |||||    
T  32094059 aaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacacg-acacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgc 32093961  T
Q  496 ttcatag 502  Q
    |||||||    
T  32093960 ttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 436 - 498
Target Start/End: Complemental strand, 40287368 - 40287306
Alignment:
Q  436 gtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttc 498  Q
    |||||||| |||||||| |||| ||||| |||| | |||| |||| |||||||||||||||||    
T  40287368 gtgtcggtatcggacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 441
Target Start/End: Complemental strand, 7328715 - 7328686
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcg 441  Q
    ||||||||||||||||||||||||||||||    
T  7328715 agtgtaattatatgtgtcggtgtcgtgtcg 7328686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Original strand, 9482952 - 9482993
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||| | ||| ||||||||||||||||||||||||||    
T  9482952 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 9482993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 451
Target Start/End: Complemental strand, 3520383 - 3520327
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 451  Q
    ||||||||||| ||| || |||||||||||||||||||| | ||| |||||| ||||    
T  3520383 agaaaatcatataattcaatgtaattatatgtgtcggtgacatgttggtgtcagaca 3520327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 445
Target Start/End: Original strand, 18039019 - 18039067
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgt 445  Q
    ||||||| | ||| ||||||||||| | |||||||||||||||||||||    
T  18039019 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 18039067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 414 - 442
Target Start/End: Complemental strand, 21139018 - 21138990
Alignment:
Q  414 tgtaattatatgtgtcggtgtcgtgtcgg 442  Q
    |||||||||||||||||||||||||||||    
T  21139018 tgtaattatatgtgtcggtgtcgtgtcgg 21138990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 447
Target Start/End: Complemental strand, 23128702 - 23128650
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcg 447  Q
    |||||| |||| ||| ||||||||| |||||||||||||| |||| |||||||    
T  23128702 agaaaaccatataattcagtgtaatcatatgtgtcggtgttgtgttggtgtcg 23128650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 2e-41; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 383 - 504
Target Start/End: Original strand, 18367842 - 18367968
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgcctta 477  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||     |||||||||| |||| ||||||||    
T  18367842 gctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgcctta 18367941  T
Q  478 tccaaggagtgtccgtgcttcataggt 504  Q
    |||||||||||||||||||||||||||    
T  18367942 tccaaggagtgtccgtgcttcataggt 18367968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 383 - 502
Target Start/End: Complemental strand, 16488643 - 16488519
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcgga-----cacgtgtctgacacagggatacgcctta 477  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     |||||||||| ||| |||| ||||||||    
T  16488643 gctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgcctta 16488544  T
Q  478 tccaaggagtgtccgtgcttcatag 502  Q
    |||||||| ||| ||||||||||||    
T  16488543 tccaaggaatgttcgtgcttcatag 16488519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 504
Target Start/End: Complemental strand, 17327701 - 17327588
Alignment:
Q  390 tttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgt 489  Q
    |||| ||||||||| | |||  ||||||| |||||||||| ||||||||||||   || |||||||||||||||||||| |||||| |||| ||||||||    
T  17327701 ttttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacg-acacgtgtctgacacagggacacgcctaatccgaggagtgt 17327603  T
Q  490 ccgtgcttcataggt 504  Q
    |||||||||||||||    
T  17327602 ccgtgcttcataggt 17327588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 9107409 - 9107299
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac-----gtgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||     ||||| ||||| |||| || ||| |||| ||||||| ||    
T  9107409 aaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgccc 9107310  T
Q  492 gtgcttcatag 502  Q
    |||||||||||    
T  9107309 gtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 395 - 504
Target Start/End: Complemental strand, 10339167 - 10339052
Alignment:
Q  395 agaaaatcataaaatgcagtgt-aattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtg 488  Q
    ||||||||| | ||| |||||| ||||||||||||| ||| |||||||||||||||||||     |||| ||||| |||| |||||| |||  |||||||    
T  10339167 agaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtg 10339068  T
Q  489 tccgtgcttcataggt 504  Q
    ||||||||||||||||    
T  10339067 tccgtgcttcataggt 10339052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 502
Target Start/End: Original strand, 13789160 - 13789273
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaa 482  Q
    ||||||||||| | |||||||||||||||||||||||||||||| ||  |||||    |   |  |||||||||||||||  |||||||||||||| |||    
T  13789160 gctaaatttttaaaaaaatcataaaatgcagtgtaattatatgtatcaatgtcg----gacat--gacacgtgtctgacatggggatacgccttattcaa 13789253  T
Q  483 ggagtgtccgtgcttcatag 502  Q
    ||||||| ||||||||||||    
T  13789254 ggagtgttcgtgcttcatag 13789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 502
Target Start/End: Original strand, 13797779 - 13797892
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaa 482  Q
    ||||||||||| | |||||||||||||||||||||||||||||| ||  |||||    |   |  |||||||||||||||  |||||||||||||| |||    
T  13797779 gctaaatttttaaaaaaatcataaaatgcagtgtaattatatgtatcaatgtcg----gacat--gacacgtgtctgacatggggatacgccttattcaa 13797872  T
Q  483 ggagtgtccgtgcttcatag 502  Q
    ||||||| ||||||||||||    
T  13797873 ggagtgttcgtgcttcatag 13797892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 16766717 - 16766827
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcgg-----acacgtgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| | ||| ||||||||||| | ||||||||||||||||||||||||     ||||||||| ||||| |||| |||||| |||| | || |||||    
T  16766717 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtcc 16766816  T
Q  492 gtgcttcatag 502  Q
    |||||||||||    
T  16766817 gtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 12696358 - 12696446
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcat 500  Q
    ||||||||||| | ||||| ||||||||||||   || ||||||||||||||| |||| || |||||||||||||||||| |||||||||    
T  12696358 cagtgtaattacaagtgtcagtgtcgtgtcggacacg-acacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 413 - 504
Target Start/End: Complemental strand, 8365542 - 8365446
Alignment:
Q  413 gtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggt 504  Q
    ||||||||| | ||||||||||||||||||| |||||||||     |||| ||||| |||| |||||| |||| |||||| ||||||||||||||||    
T  8365542 gtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcataggt 8365446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 26562707 - 26562765
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||| | ||| |||||||||||||||||||| |||||||||||||||| |||||    
T  26562707 agaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcgaacacg 26562765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 456
Target Start/End: Original strand, 9617452 - 9617513
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgt 456  Q
    ||||||||| | ||| || ||||||||||||||||||||||||  |||||||||||||||||    
T  9617452 agaaaatcacataattcaatgtaattatatgtgtcggtgtcgtcgcggtgtcggacacgtgt 9617513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 453
Target Start/End: Original strand, 4388097 - 4388161
Alignment:
Q  389 ttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||||| | ||| ||| ||||||||||||||| |||||||| ||||||| ||||||    
T  4388097 ttttttagaaaatcacataatccagggtaattatatgtgtcagtgtcgtggcggtgtctgacacg 4388161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 10294144 - 10294183
Alignment:
Q  414 tgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  10294144 tgtaattatatgtgtcggtgtcgtgttggtgtcggacacg 10294183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 411 - 458
Target Start/End: Complemental strand, 34385000 - 34384953
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtct 458  Q
    |||||||||||||||||||||| |||||| |||||| |||||||||||    
T  34385000 cagtgtaattatatgtgtcggtttcgtgttggtgtcagacacgtgtct 34384953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 499
Target Start/End: Complemental strand, 7996387 - 7996325
Alignment:
Q  438 gtcggtgtcg-gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttca 499  Q
    |||||||||| ||||||||||| |||| |||| |||||| ||||||||||| |||||||||||    
T  7996387 gtcggtgtcgcgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 7996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 499
Target Start/End: Original strand, 8022414 - 8022476
Alignment:
Q  438 gtcggtgtcg-gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttca 499  Q
    |||||||||| ||||||||||| |||| |||| |||||| ||||||||||| |||||||||||    
T  8022414 gtcggtgtcgcgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 8022476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 502
Target Start/End: Original strand, 34595199 - 34595253
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||||||| |||| || ||| |||| |||||||||||||||||||||    
T  34595199 gacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 398 - 502
Target Start/End: Original strand, 7248379 - 7248488
Alignment:
Q  398 aaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac-----gtgtctgacacagggatacgccttatccaaggagtgtccg 492  Q
    |||||| | ||| ||| |||||||||||||| || ||||||||||||| ||||||     ||||| ||||| |||| ||| |  |||| |||||||||||    
T  7248379 aaatcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccg 7248478  T
Q  493 tgcttcatag 502  Q
    ||||||||||    
T  7248479 tgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 395 - 440
Target Start/End: Complemental strand, 9025535 - 9025490
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtc 440  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||||    
T  9025535 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 9025490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 9195778 - 9195737
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    |||||||||||||||||||||||||||| |||||| ||||||    
T  9195778 agtgtaattatatgtgtcggtgtcgtgtaggtgtctgacacg 9195737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 448 - 501
Target Start/End: Original strand, 31384995 - 31385048
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcata 501  Q
    ||||||||||  |||| |||| |||||| |||||||||||||||||||||||||    
T  31384995 gacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 30326750 - 30326699
Alignment:
Q  47 atgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaattccc 98  Q
    ||||||||||||||  | ||||| ||||||||||||||||||||||| ||||    
T  30326750 atgtagaaaaagttgttctttgatgtttcaatgtgttgaatacacaaatccc 30326699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 446
Target Start/End: Complemental strand, 34073372 - 34073337
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtc 446  Q
    ||||||||||||||| ||||||||||||||||||||    
T  34073372 cagtgtaattatatgggtcggtgtcgtgtcggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 436 - 505
Target Start/End: Original strand, 4877991 - 4878064
Alignment:
Q  436 gtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggta 505  Q
    ||||||||||||||||||     |||| |||||||| | |||||| |||| ||||||||||||||||||||||||    
T  4877991 gtgtcggtgtcggacacgacacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgcttcataggta 4878064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 7723291 - 7723241
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgt 445  Q
    ||||||||||| ||| |||  ||||||||||| ||||||||||||||||||    
T  7723291 agaaaatcatataattcagcataattatatgtatcggtgtcgtgtcggtgt 7723241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 448 - 501
Target Start/End: Original strand, 9658944 - 9658998
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttat-ccaaggagtgtccgtgcttcata 501  Q
    |||||||||||||||| || | |||||| || |||||||||||||||||||||||    
T  9658944 gacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcata 9658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 504
Target Start/End: Original strand, 10649375 - 10649409
Alignment:
Q  470 acgccttatccaaggagtgtccgtgcttcataggt 504  Q
    |||||| ||||||||||||||||||||||||||||    
T  10649375 acgcctaatccaaggagtgtccgtgcttcataggt 10649409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 24093880 - 24093827
Alignment:
Q  36 ttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaataca 90  Q
    |||||||| | |||||||||||||||| |||| ||||||||| ||||||||||||    
T  24093880 ttataaatttgatgtagaaaaagttca-ttttaaagtttcaaggtgttgaataca 24093827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 456 - 502
Target Start/End: Original strand, 34446644 - 34446690
Alignment:
Q  456 tctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||| |||| || ||| ||||||||||||||||||||||||||    
T  34446644 tctgacactgggacacacctaatccaaggagtgtccgtgcttcatag 34446690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 7265634 - 7265593
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||| | ||| ||||||||||||||||||||||||||    
T  7265634 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Original strand, 8022382 - 8022423
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||    
T  8022382 agaaaatcatataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 502
Target Start/End: Original strand, 9629401 - 9629513
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtc-gtgtcggtgtcggacac-----gtgtctgacacagggatacgccttatccaaggagtg 488  Q
    ||||||||| | ||| || |||||||||||||||||||||| ||||| |||||||||||     ||||| ||||| | || ||| || |||| |||||||    
T  9629401 agaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtc-gtgtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagtg 9629499  T
Q  489 tccgtgcttcatag 502  Q
    ||| ||||||||||    
T  9629500 tccatgcttcatag 9629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 452
Target Start/End: Original strand, 28862156 - 28862197
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 452  Q
    ||||||||| ||||||||||||||||||| |||||| |||||    
T  28862156 cagtgtaatcatatgtgtcggtgtcgtgttggtgtctgacac 28862197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 5970147 - 5970091
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||| | ||| ||||||||||| |  ||| ||||||||||||||||||||||||    
T  5970147 aaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacg 5970091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 453
Target Start/End: Original strand, 8714000 - 8714056
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||| | ||| ||||||||||| |  ||| ||||||||||||||||||||||||    
T  8714000 aaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacg 8714056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 8776962 - 8776906
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggt 504  Q
    |||||||||| ||||| | || || ||| |||| |||||||||||||||||||||||    
T  8776962 gacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcataggt 8776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 9522911 - 9522963
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcgga 449  Q
    ||||||| | ||| ||||||||||| | |||||||||| ||||||||||||||    
T  9522911 aaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcgga 9522963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 11424750 - 11424694
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||| ||| || | ||||||||||||| ||||| |||||||||||| |||||    
T  11424750 aaaatcatataattcaatataattatatgtgttggtgttgtgtcggtgtcgaacacg 11424694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 17590348 - 17590296
Alignment:
Q  8 ttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagtt 60  Q
    |||||||| ||||  || |||||||| ||||||||| ||||||||||||||||    
T  17590348 ttgttaagcattctgaaaaggaaatgatttataaattttatgtagaaaaagtt 17590296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 452
Target Start/End: Complemental strand, 21395332 - 21395292
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 452  Q
    |||||||||| | |||||||||||||||| |||||||||||    
T  21395332 agtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 24265251 - 24265203
Alignment:
Q  7 cttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaa 55  Q
    ||||||||||||||||||||| | ||  ||||||||||| |||||||||    
T  24265251 cttgttaaggattcaaaagagaagattatttataaatctcatgtagaaa 24265203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 499
Target Start/End: Complemental strand, 32978910 - 32978842
Alignment:
Q  436 gtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttca 499  Q
    ||||||||||||||||||     |||| ||||| |||| ||| || |||||||||||||||||||||||    
T  32978910 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 448 - 504
Target Start/End: Complemental strand, 33001283 - 33001227
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggt 504  Q
    |||||||||||||||| |  |||||||| |||||| ||||||  |||||||||||||    
T  33001283 gacacgtgtctgacaccgaaatacgcctaatccaaagagtgtttgtgcttcataggt 33001227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 2e-41; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 384 - 501
Target Start/End: Original strand, 6401505 - 6401627
Alignment:
Q  384 ctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgccttat 478  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||     |||||||||||||||| ||||||||||||||    
T  6401505 ctaaattttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttat 6401604  T
Q  479 ccaaggagtgtccgtgcttcata 501  Q
    |||||||||||||||||||||||    
T  6401605 ccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 383 - 502
Target Start/End: Original strand, 21814267 - 21814391
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgcctta 477  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     |||||||||||| ||| |||| ||||||||    
T  21814267 gctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgcctta 21814366  T
Q  478 tccaaggagtgtccgtgcttcatag 502  Q
    |||||||| ||| ||||||||||||    
T  21814367 tccaaggaatgttcgtgcttcatag 21814391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 4822528 - 4822613
Alignment:
Q  10 gttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  4822528 gttaaagatttaaaagaggaaatgatttataaattttatgtagaaaaagttcattttttaagtttcaatgtggtgaatacacaatt 4822613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 385 - 499
Target Start/End: Complemental strand, 19453117 - 19452998
Alignment:
Q  385 taaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatc 479  Q
    ||||||||||||||||||| |||||  |  ||||||||||||||||||||||||||  |||||||||||     ||||| |||| | |||||||||||||    
T  19453117 taaattttttagaaaatcacaaaatataccgtaattatatgtgtcggtgtcgtgtcaatgtcggacacgacacatgtctcacacggagatacgccttatc 19453018  T
Q  480 caaggagtgtccgtgcttca 499  Q
    ||||||| ||||||||||||    
T  19453017 caaggagcgtccgtgcttca 19452998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 397 - 503
Target Start/End: Complemental strand, 37328883 - 37328774
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgt---gtctgacacagggatacgccttatccaaggagtgtccgt 493  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||    ||| || || ||||||||| | |||| ||||||||||||    
T  37328883 aaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacacgatgcgtccgataccgggatacgcttaatccgaggagtgtccgt 37328784  T
Q  494 gcttcatagg 503  Q
    ||||||||||    
T  37328783 gcttcatagg 37328774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 501
Target Start/End: Original strand, 3966521 - 3966632
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac-----gtgtctgacacagggatacgccttatccaaggagtgt 489  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||     |||||  ||| ||||| ||| || |||| ||||||||    
T  3966521 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgt 3966620  T
Q  490 ccgtgcttcata 501  Q
    ||||||||||||    
T  3966621 ccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 5682320 - 5682411
Alignment:
Q  5 cacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaattc 96  Q
    |||||||||| |||||||||||| ||||  ||||||||| |||||| ||||||||||  |||| ||||||||||||||||| || |||||||    
T  5682320 cacttgttaaagattcaaaagagtaaattatttataaattttatgtggaaaaagttctatttttaagtttcaatgtgttgactatacaattc 5682411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 503
Target Start/End: Original strand, 14873552 - 14873642
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatagg 503  Q
    |||||||||||||||||||||||| ||||||   |  |||||||||  |||| |||| |||||| |||| ||||||||||||||||||||||    
T  14873552 agtgtaattatatgtgtcggtgtcatgtcggacgca-acacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 14873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 21542064 - 21542159
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcata 501  Q
    ||||||||||| | |||||||||||||||||||||||     |||||||||| ||||| |||| |||||  ||||||||| ||||||||| |||||    
T  21542064 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 432 - 494
Target Start/End: Original strand, 17088340 - 17088402
Alignment:
Q  432 tgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtg 494  Q
    ||||||||||||||||| |||||||| ||||| |||| |||||| |||| |||||||||||||    
T  17088340 tgtcgtgtcggtgtcggtcacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 21576739 - 21576685
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||||||| |||| |||||| |||| |||||||||||||||||||||    
T  21576739 gacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 24111569 - 24111619
Alignment:
Q  47 atgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaattcc 97  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||||||    
T  24111569 atgtagaaaaagtccatttttaaagtttcaatgtgttaaatacacaattcc 24111619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 448 - 498
Target Start/End: Complemental strand, 30099032 - 30098982
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttc 498  Q
    |||||||||||||||| |||| |||||||||||||||||||| ||||||||    
T  30099032 gacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 39698561 - 39698671
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac-----gtgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| | ||| ||||||||||| | ||||| ||||||||||||||||||||||     || || ||||| | || |||||| |||| ||||||||||    
T  39698561 aaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtcc 39698660  T
Q  492 gtgcttcatag 502  Q
    |||||||||||    
T  39698661 gtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 414 - 502
Target Start/End: Complemental strand, 32766965 - 32766872
Alignment:
Q  414 tgtaattatatgtgtcggtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||||||  |||||||||||||||||     |||||||||| |||||  ||||||| || |||  |||||||||||||||||||||    
T  32766965 tgtaattatatgtgtttgtgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 39758278 - 39758327
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggt 432  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  39758278 gctaaattttttagaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 502
Target Start/End: Original strand, 21522784 - 21522880
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||||| |  ||||||||||||||||||||||||||||     |||| | ||| |||| |||||| |||||| |||||||||||| ||||||    
T  21522784 cagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 502
Target Start/End: Original strand, 21533350 - 21533446
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||||| |  ||||||||||||||||||||||||||||     |||| | ||| |||| |||||| |||||| |||||||||||| ||||||    
T  21533350 cagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 26449261 - 26449321
Alignment:
Q  35 tttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||| ||||||||||||| ||  ||||| |||||||||||| ||||||||||||||    
T  26449261 tttataaattttatgtagaaaaaatttctttttaaagtttcaatgttttgaatacacaatt 26449321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9765061 - 9764966
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcattttt-gaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||||||||||||||||||||||||||  ||  ||| | ||||||||||||| ||  |||||  || |||||| | |||||||||||||||    
T  9765061 agggcacttgttaaggattcaaaagaggaaataattgttaagttttatgtagaaaaaattgttttttacaaatttcaaagcgttgaatacacaatt 9764966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 7677725 - 7677835
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| | ||| ||||| ||||| | |||||||||||||||||||||| ||||||     |||| ||||| |||| |||||| |||| ||||| |||     
T  7677725 aaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcg 7677824  T
Q  492 gtgcttcatag 502  Q
    |||||||||||    
T  7677825 gtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 499
Target Start/End: Original strand, 18592110 - 18592200
Alignment:
Q  414 tgtaattatatgtgtcggtgtcgtgtcggtgtcggacac-----gtgtctgacacagggatacgccttatccaaggagtgtccgtgcttca 499  Q
    |||||||||||||| ||||||||||||||||||||||||     ||||||||||  |||| ||| || || | | ||||||||||||||||    
T  18592110 tgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatgagtgtccgtgcttca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 34103378 - 34103305
Alignment:
Q  5 cacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatg 79  Q
    ||||||||| |||||||||||||| |||  ||| |||||||||||||||||  |||| ||||| |||||||||||    
T  34103378 cacttgttatggattcaaaagagggaata-tttgtaaatcttatgtagaaacggttcttttttaaagtttcaatg 34103305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 11685974 - 11686014
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  11685974 agtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacg 11686014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 32426922 - 32426870
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtc 435  Q
    ||||||||||||||||||||| | ||| || ||||||||| ||||||||||||    
T  32426922 gctaaattttttagaaaatcacataattcattgtaattatttgtgtcggtgtc 32426870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 6035503 - 6035558
Alignment:
Q  398 aaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    |||| ||| ||| |||||||||||||| ||||||||||||||||||| | ||||||    
T  6035503 aaataatataattcagtgtaattatatttgtcggtgtcgtgtcggtgacagacacg 6035558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 502
Target Start/End: Original strand, 35017055 - 35017162
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtg 494  Q
    ||||||||| | |||  |||||||||||||| |   |||||||||| || | || ||||||||  |||  |||| |||||| |||| |||||||||||||    
T  35017055 agaaaatcacataatttagtgtaattatatgggatagtgtcgtgtcagtattgggcacgtgtccaacatcgggacacgcctaatccgaggagtgtccgtg 35017154  T
Q  495 cttcatag 502  Q
    ||||||||    
T  35017155 cttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 450
Target Start/End: Complemental strand, 41091298 - 41091243
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggac 450  Q
    ||||||||| | ||| |||||||||||||||||||| |||||||||  ||||||||    
T  41091298 agaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcaatgtcggac 41091243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 2220771 - 2220817
Alignment:
Q  46 tatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacaca 92  Q
    |||||||||||||||  |||||  |||||||||||||||||||||||    
T  2220771 tatgtagaaaaagtttctttttatagtttcaatgtgttgaatacaca 2220817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 7112358 - 7112440
Alignment:
Q  13 aaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||| ||||| ||||||| |||| |||| |||||||| ||||  |||||||| ||||| || | | ||||||||||||||    
T  7112358 aaggatttaaaagtggaaatgatttagaaattttatgtaggaaaaaatcatttttaaagttacagtatattgaatacacaatt 7112440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9857896 - 9857803
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    |||||||||| |||||||||||||   |||||| || || ||  ||| ||||||||||||| ||||||  ||||||||||||| ||| |||||||    
T  9857896 agggcacttgctaaggattcaaaattagaaatgattgatgaaatttaggtagaaaaagttc-tttttgttgtttcaatgtgttaaatgcacaatt 9857803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 500
Target Start/End: Original strand, 19579719 - 19579829
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgt 489  Q
    ||||||||| | |||  |||| ||||| | |||||||||||||||| ||||||||||||     ||||| |||| |||| |||||| |||| ||||||||    
T  19579719 agaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagtgt 19579818  T
Q  490 ccgtgcttcat 500  Q
     |||| |||||    
T  19579819 acgtgtttcat 19579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 453 - 495
Target Start/End: Complemental strand, 32426874 - 32426832
Alignment:
Q  453 gtgtctgacacagggatacgccttatccaaggagtgtccgtgc 495  Q
    |||||| |||| |||||||||||||||| ||||||||||||||    
T  32426874 gtgtctaacacggggatacgccttatccgaggagtgtccgtgc 32426832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 38328747 - 38328661
Alignment:
Q  7 cttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaa 93  Q
    |||||||||||||||||| |||||||  || || ||| ||||||  ||||||||  ||||| | |||||||||| || |||||||||    
T  38328747 cttgttaaggattcaaaaaaggaaataattcatgaattttatgttaaaaaagttactttttaatgtttcaatgtattaaatacacaa 38328661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 1863226 - 1863137
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaataca 90  Q
    |||||||| ||||||||||||||    |||||  |||| || | ||||||||| ||||||  ||||| || |||||||||||||||||||    
T  1863226 agggcactagttaaggattcaaatatagaaataatttacaagttttatgtagataaagttactttttaaactttcaatgtgttgaataca 1863137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 8611751 - 8611832
Alignment:
Q  5 cacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaa 86  Q
    |||| |||||||||||||||  |||||   || |||| | | ||||||||||||||  ||||||| ||||||||||||||||    
T  8611751 cactcgttaaggattcaaaattggaaacaattgataattttcatgtagaaaaagttgctttttgatgtttcaatgtgttgaa 8611832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 31084343 - 31084447
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgct 496  Q
    ||||||| | ||| || |||||||| | |||||| |||||||||||   || ||||||||| ||||| |||| | |||| |||| ||||||||||||| |    
T  31084343 aaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacg-acacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggt 31084441  T
Q  497 tcatag 502  Q
    ||||||    
T  31084442 tcatag 31084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 844736 - 844828
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaa 93  Q
    ||||||||||||||||||| ||||  |||||   || || ||| |||||  ||||| |||  ||||| | |||||||||||||||||||||||    
T  844736 agggcacttgttaaggatttaaaaatggaaacaattgatgaattttatgatgaaaatgttactttttaatgtttcaatgtgttgaatacacaa 844828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 439
Target Start/End: Complemental strand, 6471930 - 6471886
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgt 439  Q
    ||||||||| | ||| |||||||||||||||||| ||||||||||    
T  6471930 agaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 435
Target Start/End: Original strand, 15086489 - 15086529
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtc 435  Q
    ||||||||||| |||| | ||||||||||||||||||||||    
T  15086489 agaaaatcatataatgtaatgtaattatatgtgtcggtgtc 15086529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 19608854 - 19608806
Alignment:
Q  45 ttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaa 93  Q
    ||||||||||||||||  ||||| | |||||||||||||||||| ||||    
T  19608854 ttatgtagaaaaagttactttttaatgtttcaatgtgttgaatagacaa 19608806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 451 - 503
Target Start/End: Complemental strand, 23290049 - 23289997
Alignment:
Q  451 acgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatagg 503  Q
    ||||||||||||| |||| ||| || ||||||| | |||||||||||||||||    
T  23290049 acgtgtctgacaccgggacacgtctaatccaagcaatgtccgtgcttcatagg 23289997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 2e-41; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 383 - 504
Target Start/End: Original strand, 25934622 - 25934748
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgcctta 477  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||||| ||||||||||||||     |||||||||||||||| |||||||||||||    
T  25934622 gctaaattttctagaaaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgtctgacacggggatacgcctta 25934721  T
Q  478 tccaaggagtgtccgtgcttcataggt 504  Q
    |||||||||||||||||||||||||||    
T  25934722 tccaaggagtgtccgtgcttcataggt 25934748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 17630381 - 17630283
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaag-ttcatttttgaagtttcaatgtgttgaatacacaattccc 98  Q
    ||||||||||||||||||| ||||||||||||  ||||||||| |||||||||||||| ||  ||||| |||||||||||| ||||||| |||||||||    
T  17630381 agggcacttgttaaggatttaaaagaggaaataatttataaattttatgtagaaaaagtttttttttttaagtttcaatgtcttgaatatacaattccc 17630283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 383 - 501
Target Start/End: Complemental strand, 10577788 - 10577676
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaa 482  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||     |   || || |||||||||||| |||| |||||||||||||    
T  10577788 gctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcgggggcg-----gacacg-acgcgtgtctgacacggggacacgccttatccaa 10577695  T
Q  483 ggagtgtccgtgcttcata 501  Q
    |||||||||||||||||||    
T  10577694 ggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 30984611 - 30984521
Alignment:
Q  5 cacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    |||||||||| | ||||||||| |||||| ||||||| | |||||||||||||||| ||||||||||||| ||| |||| |||||||||||    
T  30984611 cacttgttaaagtttcaaaagatgaaatgatttataagttttatgtagaaaaagtttatttttgaagttttaatttgttaaatacacaatt 30984521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 47989517 - 47989627
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| | ||| ||||||||||| | |||||||||||||||||||||||||||||     |||||||||  |||| |||||| |||| ||||||||||    
T  47989517 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtcc 47989616  T
Q  492 gtgcttcatag 502  Q
    |||||||||||    
T  47989617 gtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 39527119 - 39527025
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||||||||||||||||||  ||||||  |  |||||| ||||||||||||||||| ||||||  ||||||||| ||||||| |||||||    
T  39527119 agggcacttgttaaggattcaaaattggaaataatcgataaattttatgtagaaaaagttcctttttgttgtttcaatgggttgaatgcacaatt 39527025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 44482248 - 44482306
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  44482248 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 44482306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 504
Target Start/End: Original strand, 9828064 - 9828176
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtc-----ggacacgtgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| | ||| |||||||||| ||||||||||||||||||| |||||      |||||||||| ||||| |||| ||| || |||| ||||||||||    
T  9828064 aaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtcc 9828163  T
Q  492 gtgcttcataggt 504  Q
    |||||||||||||    
T  9828164 gtgcttcataggt 9828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 16966549 - 16966605
Alignment:
Q  39 taaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  16966549 taaattttatgtagaaaaagttcatttttgaagtttcaatgtggtgagtacacaatt 16966605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 397 - 500
Target Start/End: Complemental strand, 1486748 - 1486646
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgct 496  Q
    ||||||| | ||| ||||||||||||| ||||||||||||||||||   | |||||||||| ||||| |||| |||||| |||| ||||||||| |||||    
T  1486748 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacac-gacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgct 1486650  T
Q  497 tcat 500  Q
    ||||    
T  1486649 tcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 420 - 502
Target Start/End: Complemental strand, 41597497 - 41597410
Alignment:
Q  420 tatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||| ||||| ||||| ||||||||||||     |||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  41597497 tatatgtgttggtgttgtgtccgtgtcggacacgacacgtgtctgacacggggatacgctttatccaaggagtgtctgtgcttcatag 41597410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 5944303 - 5944413
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcgg-----acacgtgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| | ||| ||||||||||||| ||||||||||||||||| || |||     |||| |||| ||||| ||||||||||| |||| |||||||| |    
T  5944303 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttc 5944402  T
Q  492 gtgcttcatag 502  Q
    |||||||||||    
T  5944403 gtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 411 - 500
Target Start/End: Original strand, 17778580 - 17778670
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcg-gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcat 500  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||||| ||||| |||| | |||| |||| || ||||| ||||||||||    
T  17778580 cagtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 25361904 - 25361962
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||| | ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  25361904 agaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacg 25361962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 32461447 - 32461393
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||||||| |||| |||||| ||||||| ||||||||||||||||||    
T  32461447 gacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 34040836 - 34040747
Alignment:
Q  5 cacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    |||||||||| |||| ||||||||||||  ||| ||||| |||||||||||| |||  ||||| | ||||| |||||||||||||||||||    
T  34040836 cacttgttaaagatttaaaagaggaaattatttgtaaattttatgtagaaaatgtt-ttttttaatgtttctatgtgttgaatacacaatt 34040747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 449
Target Start/End: Original strand, 34371731 - 34371785
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcgga 449  Q
    ||||||||| | ||| ||||||||||||||||||||||||||||| |||||||||    
T  34371731 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcgga 34371785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 9629939 - 9629834
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||||| ||| |||||| |||||| ||||||||||||||||| |||||||||||     |||| ||||| |||| ||| ||  |||||| |||||||    
T  9629939 aaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtccgacaccgggacacgtctcgtccaagaagtgtcc 9629840  T
Q  492 gtgctt 497  Q
    ||||||    
T  9629839 gtgctt 9629834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 504
Target Start/End: Original strand, 40917784 - 40917881
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggt 504  Q
    |||||||||| | || |||||||||||||||||| |     |||||||||| ||||| |||| |||||| |||| |||| ||||||||||||||||||    
T  40917784 agtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcataggt 40917881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 52698554 - 52698458
Alignment:
Q  2 gggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaattccc 98  Q
    |||||||||||||||||| ||||  |||||   || |||| | ||||| ||||||||||  ||||||   |||||||||||||||||||||||||||    
T  52698554 gggcacttgttaaggattaaaaaatggaaacaattgataacttttatggagaaaaagttgttttttgttatttcaatgtgttgaatacacaattccc 52698458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 436
Target Start/End: Original strand, 30749852 - 30749899
Alignment:
Q  389 ttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  30749852 ttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 30749899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 436
Target Start/End: Original strand, 30771303 - 30771350
Alignment:
Q  389 ttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  30771303 ttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 30771350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 502
Target Start/End: Complemental strand, 34712407 - 34712323
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||||||||| ||||||||||||      |||||||||  |||| |||| ||| || || |||||||||||||||||||||||    
T  34712407 agtgtaattatatgtgtcagtgtcgtgtcgg------acacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcatag 34712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 502
Target Start/End: Complemental strand, 15449256 - 15449170
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||| | ||||| ||||||| |||||||||||||||||    |||| | || | |||| |||||||||||||| |||||||||||    
T  15449256 agtgtaattacaagtgtctgtgtcgtatcggtgtcggacacgtg----acaccgagacatgcctaatccaaggagtgtctgtgcttcatag 15449170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 411 - 490
Target Start/End: Complemental strand, 6612196 - 6612112
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac-----gtgtctgacacagggatacgccttatccaaggagtgtc 490  Q
    ||||||||||| | ||||||||||||||||| ||||||||||     ||||| |||||  ||| |||||| ||||||||||||||    
T  6612196 cagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 443
Target Start/End: Original strand, 38503338 - 38503386
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggt 443  Q
    ||||||||||| | | ||||||||||||||||||||||||| |||||||    
T  38503338 agaaaatcatatatttcagtgtaattatatgtgtcggtgtcctgtcggt 38503386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 501
Target Start/End: Complemental strand, 45534236 - 45534131
Alignment:
Q  390 tttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgt 489  Q
    |||||||||||||| | |||  ||||||| ||||| |||||||||      ||||| | ||| |||||||||| ||||| ||||||||||| ||||||||    
T  45534236 tttttagaaaatcacataatttagtgtaagtatatatgtcggtgt------ggtgtggtacatgtgtctgacatagggacacgccttatccgaggagtgt 45534143  T
Q  490 ccgtgcttcata 501  Q
      ||||||||||    
T  45534142 ttgtgcttcata 45534131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 51139337 - 51139245
Alignment:
Q  5 cacttgttaaggattcaaaagaggaaatggtttataaatcttatgtaga-aaaagttcatttttgaagtttcaatgtgttgaatacacaattc 96  Q
    ||||||||||| | ||||||||| ||||| |||| |||| ||||||||| ||||  |||||||| ||| || ||||| || ||||||||||||    
T  51139337 cacttgttaagaactcaaaagagaaaatgatttagaaattttatgtagaaaaaaaatcatttttaaagatttaatgtattaaatacacaattc 51139245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 504
Target Start/End: Original strand, 15765828 - 15765879
Alignment:
Q  453 gtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggt 504  Q
    ||||||||||| |||| |||||| |||| | |||||||||||||||||||||    
T  15765828 gtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcataggt 15765879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 31694749 - 31694694
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 452  Q
    ||||||| | ||| |||| |||||| | ||||||||||||||||||||||||||||    
T  31694749 aaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacac 31694694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 503
Target Start/End: Original strand, 37598896 - 37598951
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatagg 503  Q
    |||||||||| ||||  |||| |||||| |||| ||||||||||||||||||||||    
T  37598896 gacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 52903269 - 52903308
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  52903269 aaaatcatataattcagtgtaattatatgtgtcggtgtcg 52903308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 5376525 - 5376483
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||| | ||||||||||||||||| |||||||||||    
T  5376525 cagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacacg 5376483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 10474417 - 10474467
Alignment:
Q  46 tatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaattc 96  Q
    |||||| ||||| || |||||| |||||||||| |||||||||||||||||    
T  10474417 tatgtaaaaaaatttgatttttaaagtttcaatatgttgaatacacaattc 10474467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 21038117 - 21038159
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||| ||||| ||| |||||||||||||||||||||||    
T  21038117 cagtgtaatcatatgcgtcagtgtcgtgtcggtgtcggacacg 21038159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 453
Target Start/End: Original strand, 34315718 - 34315788
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||| ||||  | | ||| | |||||||||||||||||||| |||| ||||||||| |||||    
T  34315718 gctaaattttttaaaaaactacataattcggtgtaattatatgtgtcggtatcgtatcggtgtcgaacacg 34315788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 37599619 - 37599713
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    |||||||||||||| |||| ||||   |||||| || || ||  ||| ||||||||||||  ||||||  ||||||||||||||||| |||||||    
T  37599619 agggcacttgttaaagatttaaaactagaaatgattgatgaaatttaggtagaaaaagttactttttgctgtttcaatgtgttgaatgcacaatt 37599713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 439
Target Start/End: Complemental strand, 48148076 - 48148034
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgt 439  Q
    ||||||||| ||| |||||||||||||| ||||||||||||||    
T  48148076 aaaatcatataattcagtgtaattatatatgtcggtgtcgtgt 48148034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 2570979 - 2571067
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaataca 90  Q
    |||||||| ||||||||||||||    |||||  |||| || | ||||||||| | |||| |||||| ||||||||||||||||||||||    
T  2570979 agggcactagttaaggattcaaatatagaaataatttacaagttttatgtagatatagtt-atttttaaagtttcaatgtgttgaataca 2571067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Complemental strand, 7918252 - 7918207
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtc 440  Q
    ||||||||| | ||| ||||||||||||||||||| ||||||||||    
T  7918252 agaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 7918207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 501
Target Start/End: Original strand, 12919010 - 12919063
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcata 501  Q
    |||||||||||||||| |||| ||| ||||||| || ||||| |||||||||||    
T  12919010 gacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgcttcata 12919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Original strand, 18337395 - 18337448
Alignment:
Q  449 acacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||| ||||| |||| | |||| |||| |||||||||||||||||||||    
T  18337395 acacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Complemental strand, 20157391 - 20157346
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtc 440  Q
    ||||||||| | ||| ||||||||| ||||||||||||||||||||    
T  20157391 agaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtc 20157346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 436
Target Start/End: Complemental strand, 39130812 - 39130767
Alignment:
Q  391 ttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||||| ||| |||  |||||||||||||||||||||||||    
T  39130812 ttttagaaaattatataatttagtgtaattatatgtgtcggtgtcg 39130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 501
Target Start/End: Complemental strand, 48415719 - 48415667
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcata 501  Q
    |||||||||  |||||||| | |||||| |||||||||||||||||||||||||    
T  48415719 gacacgtgttggacacagg-acacgcctaatccaaggagtgtccgtgcttcata 48415667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 51972102 - 51972147
Alignment:
Q  39 taaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttg 84  Q
    ||||| |||||| ||||||||| |||||| ||||||||||||||||    
T  51972102 taaattttatgttgaaaaagttaatttttcaagtttcaatgtgttg 51972147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 502
Target Start/End: Original strand, 52903297 - 52903365
Alignment:
Q  436 gtgtcggtgtcggacacgtgtct--gacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||||||||||||||| |  ||||| |||| ||| ||||| | | |||||||||||||||||||    
T  52903297 gtgtcggtgtcggacacgtgtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcatag 52903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 7445037 - 7444945
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaa 93  Q
    |||||||||||||| ||||| |||   |||||  || |||| | | ||||| ||||||||  |||||||  ||||||||||||||||||||||    
T  7445037 agggcacttgttaaagattctaaaatagaaataattgataactttcatgtataaaaagttgctttttgatatttcaatgtgttgaatacacaa 7444945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 26478113 - 26478065
Alignment:
Q  45 ttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaa 93  Q
    ||||||||||||||||  ||||||| |||| |||||||||| |||||||    
T  26478113 ttatgtagaaaaagttattttttgatgttttaatgtgttgagtacacaa 26478065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 28273127 - 28273071
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||| ||| ||||||||||| | ||||||||||| | ||| |||||||||||    
T  28273127 aaaatcatataattcagtgtaattacaagtgtcggtgtcctatcgatgtcggacacg 28273071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 32003098 - 32003038
Alignment:
Q  38 ataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaattccc 98  Q
    |||||||||||||||||||| ||  |||||||  ||||||| |||||||||| ||| ||||    
T  32003098 ataaatcttatgtagaaaaaattgttttttgatatttcaatatgttgaatacgcaaatccc 32003038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 8e-38; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 383 - 502
Target Start/End: Complemental strand, 5414225 - 5414101
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcgga-----cacgtgtctgacacagggatacgcctta 477  Q
    ||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||     ||||||||||||||||||| || |||||    
T  5414225 gctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacagggacacacctta 5414126  T
Q  478 tccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||||||||||||||||    
T  5414125 tccaaggagtgtccgtgcttcatag 5414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 4197190 - 4197283
Alignment:
Q  2 gggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||  ||||| ||||||||| |||||||||||||||||    
T  4197190 gggcacttgttaaggattcaaaagaggaaatgatttataaattttatgtagaaaaagttatttttttaagtttcaaggtgttgaatacacaatt 4197283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 13414257 - 13414351
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    |||||||||||||| ||||||||||||| |||  ||||||||| ||||||| |||||||| ||||||||||||||||   ||| |||||||||||    
T  13414257 agggcacttgttaatgattcaaaagagggaataatttataaattttatgtaaaaaaagtttatttttgaagtttcaacaggttaaatacacaatt 13414351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 30982903 - 30982808
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtc-----ggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcata 501  Q
    ||||||||||||| ||||||||||||||||||||||      |||||||||| ||||| |||| |||||| |||||| ||||||||||||||||||    
T  30982903 cagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 33873860 - 33873941
Alignment:
Q  14 aggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    |||||||||||||||||||| | ||||||| ||||||||||| ||||| ||||| ||||||||||| ||| || ||||||||    
T  33873860 aggattcaaaagaggaaatgatctataaattttatgtagaaatagttctttttttaagtttcaatgcgttaaaaacacaatt 33873941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 395 - 466
Target Start/End: Original strand, 40742609 - 40742680
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagg 466  Q
    ||||||||||| |||  ||||||||||||||||||| ||||||||||||||| |||||||| | ||||||||    
T  40742609 agaaaatcatataatctagtgtaattatatgtgtcgatgtcgtgtcggtgtcagacacgtgaccgacacagg 40742680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 26184607 - 26184691
Alignment:
Q  11 ttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    |||| ||||| |||||||||||  ||||||||| ||| ||| ||||||||  |||||||||||||||||  ||||||||||||||    
T  26184607 ttaatgattctaaagaggaaattatttataaattttaagtataaaaagtttctttttgaagtttcaatgatttgaatacacaatt 26184691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 391 - 502
Target Start/End: Complemental strand, 46084036 - 46083920
Alignment:
Q  391 ttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgccttatccaagga 485  Q
    |||||| |||||| | |||  ||||||||||||||||||||||||||||| || |||     |||||||||||||| | |||| |||||||||   ||||    
T  46084036 ttttagtaaatcacataatctagtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgtctgacgcggggacacgccttataagagga 46083937  T
Q  486 gtgtccgtgcttcatag 502  Q
    |||||| ||||||||||    
T  46083936 gtgtccatgcttcatag 46083920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 397 - 499
Target Start/End: Original strand, 28084542 - 28084640
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgct 496  Q
    ||||||| | ||| || |||||||| | ||||| ||||||||||||||    ||||||||| ||||| |||| |||||| |||| |||||||||||||||    
T  28084542 aaaatcacataattcaatgtaattacaagtgtctgtgtcgtgtcggtg----acacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgct 28084637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 22234929 - 22234873
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||| | ||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  22234929 aaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacg 22234873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 505
Target Start/End: Complemental strand, 24613742 - 24613627
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtc-----ggacacgtgtctgacacagggatacgccttatccaaggagtgt 489  Q
    ||||||||| | ||| || ||||| || | ||||||||||| ||||||||||      ||||||||||||||||  ||| ||| || |||| ||||||||    
T  24613742 agaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgt 24613643  T
Q  490 ccgtgcttcataggta 505  Q
    ||||||||||||||||    
T  24613642 ccgtgcttcataggta 24613627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 36832840 - 36832890
Alignment:
Q  36 ttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaat 87  Q
    |||||||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  36832840 ttataaattttatgtagaaaaagttcattttt-aagtttcaatgtattgaat 36832890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 452
Target Start/End: Complemental strand, 44132691 - 44132628
Alignment:
Q  389 ttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 452  Q
    |||||||||||||||   ||| |||| |||||||||||||||||||||||| ||||||| ||||    
T  44132691 ttttttagaaaatcacgtaattcagtataattatatgtgtcggtgtcgtgttggtgtcgaacac 44132628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 715599 - 715545
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||| |||| |||||||||| |||||| |||| |||||||||||||||||||||    
T  715599 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 752925 - 752871
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||| |||| |||||||||| |||||| |||| |||||||||||||||||||||    
T  752925 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 23292980 - 23292926
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||| ||||| |||| |||||| |||| |||||||||||||||||||||    
T  23292980 gacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 26659778 - 26659840
Alignment:
Q  5 cacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcattttt 67  Q
    ||||| ||||||||| ||||||||||||  ||| |||||||||||||||||| |||| |||||    
T  26659778 cacttattaaggatttaaaagaggaaattatttgtaaatcttatgtagaaaatgttccttttt 26659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 32536869 - 32536954
Alignment:
Q  8 ttgttaaggattcaaaagaggaaatggtttataaatc-ttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaa 93  Q
    ||||||||||||||||||||  |||| |||||||||| ||||||||||||||||  ||||  || ||||||| ||||||||| ||||    
T  32536869 ttgttaaggattcaaaagagagaatgatttataaatctttatgtagaaaaagtt-tttttaaaaatttcaatttgttgaatatacaa 32536954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 502
Target Start/End: Original strand, 42640577 - 42640643
Alignment:
Q  436 gtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||||||||||||| | |||  ||| |||||| |||| |||||| ||||||||||||||    
T  42640577 gtgtcggtgtcggacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcatag 42640643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 449 - 502
Target Start/End: Original strand, 18966575 - 18966628
Alignment:
Q  449 acacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||| ||||  ||||||||||| ||| ||||||||||||||||||||||    
T  18966575 acacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcatag 18966628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 19500882 - 19500841
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  19500882 agtgtaattatatgtgatggtgtcgtgtcggtgtcggacacg 19500841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 33881889 - 33881945
Alignment:
Q  39 taaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||||| |||| |||||  ||||| || ||||||||||||||||||||||||    
T  33881889 taaatcttatgcagaagaagttactttttaaaatttcaatgtgttgaatacacaatt 33881945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 451
Target Start/End: Original strand, 4100003 - 4100038
Alignment:
Q  416 taattatatgtgtcggtgtcgtgtcggtgtcggaca 451  Q
    ||||||||||||||||||||||||| ||||||||||    
T  4100003 taattatatgtgtcggtgtcgtgtctgtgtcggaca 4100038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 468
Target Start/End: Original strand, 50280919 - 50280973
Alignment:
Q  413 gtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacaggga 468  Q
    ||||||||| | ||| ||||||||||||| ||||||||||||||||||||| ||||    
T  50280919 gtgtaattacaagtgccggtgtcgtgtcg-tgtcggacacgtgtctgacaccggga 50280973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 501
Target Start/End: Complemental strand, 3947791 - 3947702
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcata 501  Q
    ||||||||||| | ||||| ||||||||||||   || ||||||||| |||||  ||| || ||| |||| ||||||||||||||||||||    
T  3947791 cagtgtaattacaagtgtcagtgtcgtgtcggacacg-acacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 19097888 - 19097835
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||||||| |||| |||||||| |||| ||||||| |||||||||||    
T  19097888 gacacgtgtctgacacggggacacgcctta-ccaaagagtgtctgtgcttcatag 19097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 43921089 - 43921175
Alignment:
Q  9 tgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||||||||||   |||||| || || ||| |||||| |||||||||  ||||||   |||||||||||||||| |||||||    
T  43921089 tgttaaggattcaaaactagaaatgattcatgaattttatgttgaaaaagttactttttgttctttcaatgtgttgaatgcacaatt 43921175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 48051791 - 48051717
Alignment:
Q  6 acttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgt 80  Q
    |||||||||||||||||||   |||||  || |||||| ||||||||||||||||  ||||||  ||||||||||    
T  48051791 acttgttaaggattcaaaaatagaaataattgataaattttatgtagaaaaagttactttttgttgtttcaatgt 48051717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Original strand, 7970537 - 7970582
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtc 440  Q
    ||||||||||| ||| |||||||||||||||| | |||||||||||    
T  7970537 agaaaatcatataattcagtgtaattatatgttttggtgtcgtgtc 7970582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 444
Target Start/End: Original strand, 46160930 - 46160963
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtg 444  Q
    |||||| |||||||||||||||||||||||||||    
T  46160930 cagtgttattatatgtgtcggtgtcgtgtcggtg 46160963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 453
Target Start/End: Complemental strand, 5225628 - 5225596
Alignment:
Q  421 atatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||||||||| |||||||||||||    
T  5225628 atatgtgtcggtgtcgtgttggtgtcggacacg 5225596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 19482744 - 19482800
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggt 504  Q
    |||||||||| ||||| |||| || ||| |||| |||||||| ||||||||||||||    
T  19482744 gacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcataggt 19482800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 37627019 - 37626971
Alignment:
Q  45 ttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaa 93  Q
    ||||||||||||||||  ||||| | |||| ||||||||||||||||||    
T  37627019 ttatgtagaaaaagttactttttaatgtttaaatgtgttgaatacacaa 37626971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 38868930 - 38868878
Alignment:
Q  35 tttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaat 87  Q
    ||||||| | ||||||||||||||||  ||||| || ||||||||||||||||    
T  38868930 tttataagttttatgtagaaaaagttactttttaaactttcaatgtgttgaat 38868878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 56128591 - 56128671
Alignment:
Q  15 ggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||||   |||||| ||||| ||  ||| ||||||||||||  ||||||  ||||||||||||||||| |||||||    
T  56128591 ggattcaaaaatagaaatgatttatgaaatttaggtagaaaaagttactttttgttgtttcaatgtgttgaatgcacaatt 56128671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 384 - 501
Target Start/End: Complemental strand, 6048 - 5926
Alignment:
Q  384 ctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgccttat 478  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||     |||||||||||||||||| || |||||||||    
T  6048 ctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgtctgacacagagacacgccttat 5949  T
Q  479 ccaaggagtgtccgtgcttcata 501  Q
    ||||||||||||||||| |||||    
T  5948 ccaaggagtgtccgtgcctcata 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 383 - 502
Target Start/End: Complemental strand, 36096428 - 36096304
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcgga-----cacgtgtctgacacagggatacgcctta 477  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||     |||||||||||||| |||| ||||||||    
T  36096428 gctaaattttttagaaaatcacaaaatgcagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtctgacacggggacacgcctta 36096329  T
Q  478 tccaaggagtgtccgtgcttcatag 502  Q
     |||| |||||||||||||||||||    
T  36096328 accaaagagtgtccgtgcttcatag 36096304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 39575463 - 39575557
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||| ||||||||||||||||||||||  ||||||||| ||||||| ||||||||  ||||||||||||||||||||| |||||||||||    
T  39575463 agggcacttattaaggattcaaaagaggaaataatttataaattttatgtataaaaagtttctttttgaagtttcaatgtgttaaatacacaatt 39575557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 384 - 502
Target Start/End: Complemental strand, 34785034 - 34784911
Alignment:
Q  384 ctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttat 478  Q
    |||| ||||||||||||||| | |||  |||||||||||||||||||||||||||||||| |||||||||     |||||||||| |||| |||||||||    
T  34785034 ctaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacacctgtctgacacggggacacgccttat 34784935  T
Q  479 ccaaggagtgtccgtgcttcatag 502  Q
     | ||||||||| |||||||||||    
T  34784934 tcgaggagtgtctgtgcttcatag 34784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3856072 - 3855978
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||||||||| ||| ||||||||||||  ||||||||  ||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  3856072 agggcacttgttaagtatttaaaagaggaaataatttataaaatttatgtaaaaaaagtatatttttgaagtttcaatgtgttgaatacacaatt 3855978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 397 - 504
Target Start/End: Original strand, 37419763 - 37419875
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca-----cgtgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| ||||| ||||||||||| | ||| |||||||||||||||||||||||     |||||| ||||| |||| |||||| |||| ||||||||||    
T  37419763 aaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtcc 37419862  T
Q  492 gtgcttcataggt 504  Q
    |||||||||||||    
T  37419863 gtgcttcataggt 37419875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 383 - 502
Target Start/End: Original strand, 24009302 - 24009414
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaa 482  Q
    ||||| ||||||||||||||| |||||||||||||| | |||||||||||||||     |   || ||||||||||||||| |||| |||||||||||||    
T  24009302 gctaatttttttagaaaatcacaaaatgcagtgtaaat-tatgtgtcggtgtcg-----gacacg-acacgtgtctgacacggggacacgccttatccaa 24009394  T
Q  483 ggagtgtccgtgcttcatag 502  Q
    ||||||||||||||||||||    
T  24009395 ggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 389 - 453
Target Start/End: Complemental strand, 18054850 - 18054786
Alignment:
Q  389 ttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||    
T  18054850 ttttttagaaaatcacaaactgcagtgtaattatatgtgttggtgtcgtgtcggtgtcgaacacg 18054786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 395 - 502
Target Start/End: Original strand, 35056886 - 35056998
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgt 489  Q
    |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||     |||| ||||| |  | |||||| |||  ||||||||    
T  35056886 agaaaaccatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgt 35056985  T
Q  490 ccgtgcttcatag 502  Q
    |||||||||||||    
T  35056986 ccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 30717569 - 30717459
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| | ||| ||||||||||| | |||||| |||||||||| |||||||||||     |||  ||||| ||||||||||| |||||||||||||||    
T  30717569 aaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtcc 30717470  T
Q  492 gtgcttcatag 502  Q
    |||||||||||    
T  30717469 gtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 502
Target Start/End: Original strand, 41843448 - 41843565
Alignment:
Q  384 ctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaag 483  Q
    ||||||||||||| |||||| | ||| | || ||||||||||||||||||| |||||||   | |||||||||| ||||| |||| |||| |||||| ||    
T  41843448 ctaaattttttaggaaatcacataattcggtataattatatgtgtcggtgttgtgtcggacgc-gacacgtgtccgacacggggacacgctttatccgag 41843546  T
Q  484 gagtgtccgtgcttcatag 502  Q
    ||||||| |||||||||||    
T  41843547 gagtgtctgtgcttcatag 41843565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 3773110 - 3773035
Alignment:
Q  15 ggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaataca 90  Q
    ||||||||||||| ||||  ||||||||| ||||||||| ||||||||||||| |||||||||| ||| |||||||    
T  3773110 ggattcaaaagagaaaataatttataaattttatgtagataaagttcatttttaaagtttcaatatgtcgaataca 3773035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 411 - 502
Target Start/End: Complemental strand, 11223888 - 11223793
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||||| | ||||||||||| ||| |||||||||||||    |||||||||| |||| |||||| |||  |||||||||||||||||||||    
T  11223888 cagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacactgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 502
Target Start/End: Complemental strand, 32749866 - 32749754
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggac-----acgtgtctgacacagggatacgccttatccaaggagtgt 489  Q
    ||||||||| | ||| ||||||||| ||| ||||| ||||||||||| ||||||||     | ||||| ||||| |||| |||||||||| |||||||||    
T  32749866 agaaaatcacataattcagtgtaataataagtgtcagtgtcgtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgt 32749767  T
Q  490 ccgtgcttcatag 502  Q
    ||| |||||||||    
T  32749766 ccgcgcttcatag 32749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 33058797 - 33058852
Alignment:
Q  5 cacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagtt 60  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||  |||||||    
T  33058797 cacttgttaaggattcaaaaaaggaaatgatttataaatcttatgtaataaaagtt 33058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 413 - 502
Target Start/End: Original strand, 26769547 - 26769641
Alignment:
Q  413 gtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||| | ||||||||||| ||||||| |||||||||     |||| ||||| |||| |||||| |||| |||||||||||||||||||||    
T  26769547 gtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 6913422 - 6913481
Alignment:
Q  35 tttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||| |||||||||||| |||| ||| | |||||||||||||||||||||||||||    
T  6913422 tttataaattttatgtagaaaa-gttcttttattaagtttcaatgtgttgaatacacaatt 6913481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 12880201 - 12880117
Alignment:
Q  7 cttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacac 91  Q
    ||||||||||||||||||  ||||||  || |||| | ||||||||||||| ||  ||||| || ||||||||||||||||||||    
T  12880201 cttgttaaggattcaaaaatggaaataattgataagttttatgtagaaaaaattactttttaaaatttcaatgtgttgaatacac 12880117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 20242779 - 20242727
Alignment:
Q  384 ctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    |||| ||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  20242779 ctaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 20242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 306151 - 306240
Alignment:
Q  5 cacttgttaaggattcaaaagaggaaatggtttataaatcttatgtag-aaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||||  ||||||||||||||||| ||||||||| |||||||| ||||| |||| |||| || ||||||| |||| |||||||||||    
T  306151 cacttgttaattattcaaaagaggaaatgatttataaat-ttatgtagaaaaaaattca-ttttaaattttcaatatgttcaatacacaatt 306240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 436 - 495
Target Start/End: Original strand, 21624315 - 21624374
Alignment:
Q  436 gtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgc 495  Q
    |||||||||||||||||||||| ||||  |||| || ||| |||||||||||||||||||    
T  21624315 gtgtcggtgtcggacacgtgtccgacagcgggacacacctaatccaaggagtgtccgtgc 21624374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 411 - 501
Target Start/End: Original strand, 44860354 - 44860449
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac-----gtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcata 501  Q
    ||||||||||||||||||||||||||||| ||||| ||||||     ||||| ||||  |||| || ||| || | ||||||||||||||||||||    
T  44860354 cagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 18054770 - 18054716
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||||||| |  | |||||||||||||||| ||||||||||||||||    
T  18054770 gacacgtgtctgacacggaaacacgccttatccaaggaatgtccgtgcttcatag 18054716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 502
Target Start/End: Complemental strand, 42511411 - 42511322
Alignment:
Q  417 aattatatgtgtcggtgtcgtgtcggtgtcgg-----acacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||| |||||||| || |||||||     ||||||||| |||||||||| ||| || |||| |||||||||||||||||||||    
T  42511411 aattatatgtgttggtgtcgt-tcagtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 453
Target Start/End: Original strand, 19614203 - 19614259
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    |||||| | |||| ||||||||||||||||||| || |||||||||||||| |||||    
T  19614203 aaaatctttaaattcagtgtaattatatgtgtcagtatcgtgtcggtgtcgaacacg 19614259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 34691844 - 34691805
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  34691844 aaaatcatataattcagtgtaattatatgtgtcggtgtcg 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 34714256 - 34714217
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  34714256 aaaatcatataattcagtgtaattatatgtgtcggtgtcg 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 503
Target Start/End: Complemental strand, 20242720 - 20242666
Alignment:
Q  449 acacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatagg 503  Q
    |||||||||||||||  ||| ||||||||||| | ||||||| ||||||||||||    
T  20242720 acacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttcatagg 20242666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 502
Target Start/End: Complemental strand, 24975366 - 24975255
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac----gtgtctgacacagggatacgccttatccaaggagtgtc 490  Q
    |||||||| || ||| |||||||| |||||| |||||||||||||| ||||| |||||    ||||| ||||| |||| |   || |||  |||||||||    
T  24975366 agaaaatcgtataattcagtgtaaatatatgcgtcggtgtcgtgtccgtgtcagacacacatgtgtccgacactgggacaaatctaatctgaggagtgtc 24975267  T
Q  491 cgtgcttcatag 502  Q
    ||||||||||||    
T  24975266 cgtgcttcatag 24975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 28412370 - 28412476
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgt-gtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgc 495  Q
    ||||||| | ||| |||||||||||| ||| |  |||| ||||| ||||||||||||||||| ||||| |||| ||| || || | ||||| ||| ||||    
T  28412370 aaaatcacataattcagtgtaattatgtgtcggtggtgccgtgttggtgtcggacacgtgtccgacactgggacacggctaattcgaggagcgtcagtgc 28412469  T
Q  496 ttcatag 502  Q
    |||||||    
T  28412470 ttcatag 28412476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 452
Target Start/End: Original strand, 28524447 - 28524501
Alignment:
Q  398 aaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 452  Q
    |||||| | ||| |||||||||||||||||||| ||| |||| ||||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacac 28524501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 441
Target Start/End: Complemental strand, 30527636 - 30527590
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcg 441  Q
    ||||||||||| |||  ||||||||||||||||||||| ||||||||    
T  30527636 agaaaatcatataatttagtgtaattatatgtgtcggtatcgtgtcg 30527590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 41311811 - 41311737
Alignment:
Q  9 tgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgtt 83  Q
    ||||||||||||||||  | ||||| ||||||||| ||||||||||||| ||  ||||| || ||||||| ||||    
T  41311811 tgttaaggattcaaaaatgtaaatgatttataaattttatgtagaaaaaattactttttaaactttcaatttgtt 41311737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 500
Target Start/End: Complemental strand, 2438730 - 2438661
Alignment:
Q  436 gtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcat 500  Q
    ||||||||||||||||||     |||| ||||| |||| |||||| |||| |||||||||||||||||||    
T  2438730 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 4207892 - 4207932
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  4207892 agtgtaattatat-tgtcggtatcgtgtcggtgtcggacacg 4207932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 452
Target Start/End: Complemental strand, 18889632 - 18889575
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 452  Q
    ||||||||| | ||| ||||||||| ||||||||||||||| |||  |||||||||||    
T  18889632 agaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacac 18889575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 29735728 - 29735781
Alignment:
Q  4 gcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaa 57  Q
    ||||||||||| |||| ||||||||||||  ||||||||| |||| ||||||||    
T  29735728 gcacttgttaatgatttaaaagaggaaataatttataaattttatatagaaaaa 29735781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Complemental strand, 38117152 - 38117099
Alignment:
Q  449 acacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||| ||||| |||| |||||| |||| ||| |||||||||||||||||    
T  38117152 acacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 4882735 - 4882679
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||| ||| ||| ||||||||||| | |||||| ||||||||||||||| ||||||    
T  4882735 aaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacg 4882679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 6045955 - 6045899
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||| ||| ||  ||| |||||||||||||||| |||| |||||||||||||    
T  6045955 aaaatcatacaattcaaagtagttatatgtgtcggtgtggtgttggtgtcggacacg 6045899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 443
Target Start/End: Complemental strand, 12668448 - 12668416
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggt 443  Q
    ||||||||||||| |||||||||||||||||||    
T  12668448 cagtgtaattataagtgtcggtgtcgtgtcggt 12668416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 437 - 500
Target Start/End: Original strand, 19942314 - 19942382
Alignment:
Q  437 tgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcat 500  Q
    |||||||||||||||||     |||||||||| |||| |||||| |||| |||||||||| ||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 452
Target Start/End: Complemental strand, 22084873 - 22084814
Alignment:
Q  395 agaaaatcataaaatgcagtgtaatt--atatgtgtcggtgtcgtgtcggtgtcggacac 452  Q
    ||||||||||| ||| ||||||||||  ||||||| |||| ||||||| |||||||||||    
T  22084873 agaaaatcatataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggacac 22084814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 23058481 - 23058433
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgt 445  Q
    ||||||| | ||| ||||||||||| | |||||||||||||||||||||    
T  23058481 aaaatcacataatccagtgtaattacaagtgtcggtgtcgtgtcggtgt 23058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 452 - 504
Target Start/End: Complemental strand, 34006980 - 34006928
Alignment:
Q  452 cgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggt 504  Q
    |||||||||||| || | || ||| || |||||||||||||||||||||||||    
T  34006980 cgtgtctgacaccggaacacacctaattcaaggagtgtccgtgcttcataggt 34006928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 37534545 - 37534453
Alignment:
Q  4 gcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttca-tttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||||||||||||| |||  ||||  ||||||||  |||||||||||||  |   |||||||||||| ||| ||||||||||| ||||    
T  37534545 gcacttgttaaggattcaagagaataaataatttataaaatttatgtagaaaaaaatatctttttgaagttttaatctgttgaatacaaaatt 37534453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 3e-31; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 383 - 502
Target Start/End: Complemental strand, 34451090 - 34450961
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcg-----gtgtcggacacg-----tgtctgacacagggatacg 472  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||     ||||||||||||     |||||||||| |||| |||    
T  34451090 gctaattttttttgaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 34450991  T
Q  473 ccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||||||||||||||||||||||||    
T  34450990 ccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 383 - 501
Target Start/End: Complemental strand, 43737864 - 43737752
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaa 482  Q
    |||||||||| | |||||||| ||||| ||||||||||||||||||||||||||     |   || ||| ||||||||||| ||||||||||||||||||    
T  43737864 gctaaattttcttgaaaatcacaaaatacagtgtaattatatgtgtcggtgtcg-----gacacg-acaggtgtctgacacggggatacgccttatccaa 43737771  T
Q  483 ggagtgtccgtgcttcata 501  Q
    |||||||||||||||||||    
T  43737770 ggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7176617 - 7176522
Alignment:
Q  1 agggcacttgttaaggattcaaaa-gaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    |||||||||||||||||||||||| ||||||||  ||||||||| ||| | | | ||||||| ||||||||||||||| |||||||||||||||||    
T  7176617 agggcacttgttaaggattcaaaaagaggaaataatttataaattttaggcaaataaagttcttttttgaagtttcaacgtgttgaatacacaatt 7176522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 394 - 502
Target Start/End: Complemental strand, 26902217 - 26902104
Alignment:
Q  394 tagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcgga-----cacgtgtctgacacagggatacgccttatccaaggagtg 488  Q
    |||||||||| | ||| ||||||||||||||||||||||||||| |  ||||||||     |||||||||| ||| |||| ||||||||||  |||||||    
T  26902217 tagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtg 26902118  T
Q  489 tccgtgcttcatag 502  Q
    ||||||||||||||    
T  26902117 tccgtgcttcatag 26902104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 504
Target Start/End: Complemental strand, 29510343 - 29510231
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca-----cgtgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| ||||| |||| |||||| | |||||||||| ||||||||||||||||     |||||| ||||| |||| || ||| |||| ||||||||||    
T  29510343 aaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtcc 29510244  T
Q  492 gtgcttcataggt 504  Q
    |||||||||||||    
T  29510243 gtgcttcataggt 29510231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 6938982 - 6939070
Alignment:
Q  10 gttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaattccc 98  Q
    ||||||| || |||| |||||||  ||||||||| ||||||| | ||||||  |||||||||||||||||  |||||||||||||||||    
T  6938982 gttaaggttttaaaataggaaataatttataaattttatgtatataaagtttctttttgaagtttcaatgctttgaatacacaattccc 6939070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 31087194 - 31087102
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaa 93  Q
    |||||||||||||  | |||||||||||||||| |||| |||| ||||  ||||||||||  ||||| |||||| ||||| ||||||||||||    
T  31087194 agggcacttgttacaggttcaaaagaggaaatgatttacaaattttataaagaaaaagtttttttttaaagttttaatgtattgaatacacaa 31087102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 502
Target Start/End: Original strand, 22652015 - 22652106
Alignment:
Q  416 taattatatgtgtcggtgtcgtgtcggtgtcggacac-----gtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||| | ||||||||||||||||||||||||||||     ||||| ||||| |||| ||| || |||| |||||||||||||||||||||    
T  22652015 taattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 501
Target Start/End: Complemental strand, 29447151 - 29447040
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgt 489  Q
    ||||||||| | ||| || ||||| || | ||||||||||| |||||||||||||||||     ||||||||||  ||| |||||| |||| ||||||||    
T  29447151 agaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgt 29447052  T
Q  490 ccgtgcttcata 501  Q
    ||||||||||||    
T  29447051 ccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 502
Target Start/End: Original strand, 18964184 - 18964309
Alignment:
Q  384 ctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcg--gtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgcctt 476  Q
    |||| ||||||||||||||| | ||| || |||||||||||||||||  |||||||||||| || |     ||||| ||||| |||| | || |||||||    
T  18964184 ctaatttttttagaaaatcacataattcaatgtaattatatgtgtcggtgtgtcgtgtcggcgttgaacacgacacctgtctaacacggagacacgcctt 18964283  T
Q  477 atccaaggagtgtccgtgcttcatag 502  Q
    |||| ||||||||| |||||||||||    
T  18964284 atccgaggagtgtctgtgcttcatag 18964309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 502
Target Start/End: Original strand, 11803277 - 11803389
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgccttatccaaggagtgt 489  Q
    ||||||||| | ||| |||||||||||||||||| ||||| |||| ||||| |     ||||| |||| |||||||| | ||| || |||| ||||||||    
T  11803277 agaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatccgaggagtgt 11803376  T
Q  490 ccgtgcttcatag 502  Q
    |||||||||||||    
T  11803377 ccgtgcttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 38842891 - 38842975
Alignment:
Q  11 ttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||||||||||| ||||  ||||  ||| ||||||| ||||| ||| |||||||| ||||||||| ||||||||| ||||    
T  38842891 ttaaggattcaaaagagaaaataatttaagaattttatgtataaaaaattcttttttgaaatttcaatgtattgaatacataatt 38842975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 502
Target Start/End: Complemental strand, 15816153 - 15816058
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcgga-----cacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||| ||||||||||||||| |||||||||     ||||  || ||||| |||| |||||| |||| || ||||||||||||||||||    
T  15816153 agtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 412 - 502
Target Start/End: Original strand, 29447479 - 29447574
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac-----gtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||||||||||| ||||||||||||||||| |||||     ||||| ||||| |||| | | || |||  |||||||||||||||||||||    
T  29447479 agtgtaattatatgtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatag 29447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 42964861 - 42964814
Alignment:
Q  47 atgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaat 94  Q
    ||||||||||||||  ||||||| ||||||||||||||||||||||||    
T  42964861 atgtagaaaaagttattttttgatgtttcaatgtgttgaatacacaat 42964814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 3951530 - 3951476
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||||||| || | |||||| ||||||||||| ||||||||||||||    
T  3951530 gacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 502
Target Start/End: Original strand, 21465432 - 21465542
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||||| ||| |  |||||||| | |||| ||||||||||| ||||||||||||     ||||  |||||||||||||||| ||   ||||||||||    
T  21465432 aaaatcatataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtcc 21465531  T
Q  492 gtgcttcatag 502  Q
    |||||||||||    
T  21465532 gtgcttcatag 21465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 397 - 446
Target Start/End: Complemental strand, 11927125 - 11927076
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtc 446  Q
    ||||||| | ||| ||||||||||||||||||||||||||||| ||||||    
T  11927125 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtc 11927076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 416 - 504
Target Start/End: Complemental strand, 33389381 - 33389293
Alignment:
Q  416 taattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggt 504  Q
    |||| |||||||| ||||||||||||    | || ||||||| ||||| ||||||| ||| ||||||| |||||| |||||||||||||    
T  33389381 taatcatatgtgttggtgtcgtgtcgaacaccgatacgtgtccgacactgggatacacctaatccaagaagtgtcggtgcttcataggt 33389293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 8343020 - 8343087
Alignment:
Q  436 gtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatagg 503  Q
    |||||||||||| ||| ||||| ||||| |||| |||||| |||| | ||||||| ||||||||||||    
T  8343020 gtgtcggtgtcgtacatgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatagg 8343087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 450
Target Start/End: Complemental strand, 14634182 - 14634127
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggac 450  Q
    ||||||| ||| ||| |||||||||||||| ||| |||||||||||| ||||||||    
T  14634182 agaaaattatataattcagtgtaattatatttgttggtgtcgtgtcgatgtcggac 14634127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 502
Target Start/End: Complemental strand, 16641991 - 16641909
Alignment:
Q  419 ttatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||||||||||||||||||||||   | |||| |||||| |||| |||| || ||| |||| ||||||||| |||||||||||    
T  16641991 ttatatgtgtcggtgtcgtgtcggacac-gacatgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttcatag 16641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 25172720 - 25172681
Alignment:
Q  414 tgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  25172720 tgtaattatatgtgtcggtgtcgtgtcaatgtcggacacg 25172681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 454
Target Start/End: Complemental strand, 28385019 - 28384976
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgt 454  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||    
T  28385019 cagtgtaattatatgtgtcggtgtcatgtcagtgtcagacacgt 28384976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 435
Target Start/End: Complemental strand, 3951575 - 3951537
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtc 435  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  3951575 aaaatcacaaaatgcagtgtacttatatgtgtcggtgtc 3951537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Complemental strand, 2572080 - 2572039
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    |||||||||| | |||||||||||||||| ||||||||||||    
T  2572080 agtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacg 2572039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 4786379 - 4786338
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||| | ||| ||||||||||||||||||||||||||    
T  4786379 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 42350499 - 42350422
Alignment:
Q  10 gttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaat 87  Q
    |||||||||| ||||  ||||||  ||||||||| ||||||||||||| ||  ||||| || ||||||||| ||||||    
T  42350499 gttaaggatttaaaaatggaaataatttataaattttatgtagaaaaatttactttttaaattttcaatgtcttgaat 42350422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 448 - 500
Target Start/End: Complemental strand, 926782 - 926730
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcat 500  Q
    |||||||||| ||||| |||| | || |||||| |||||||||||||||||||    
T  926782 gacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 448 - 500
Target Start/End: Original strand, 3025616 - 3025668
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcat 500  Q
    |||||||||||||||| | || ||| || |||| |||||||||||||||||||    
T  3025616 gacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 439
Target Start/End: Original strand, 11944699 - 11944727
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgt 439  Q
    |||||||||||||||||||||||||||||    
T  11944699 cagtgtaattatatgtgtcggtgtcgtgt 11944727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 12606870 - 12606830
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtc 435  Q
    ||||||||||| ||| || ||||||||||||||||||||||    
T  12606870 agaaaatcatataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 45183587 - 45183639
Alignment:
Q  36 ttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaata 88  Q
    |||||||| | ||||||||||||||||||||| |||||| || ||||| ||||    
T  45183587 ttataaatttgatgtagaaaaagttcatttttaaagttttaaggtgttaaata 45183639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 2e-29; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 31375623 - 31375529
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaatt 95  Q
    ||||||||||||||||||||| ||||||||||  ||| |||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  31375623 agggcacttgttaaggattcagaagaggaaattatttgtaaatcttatgtagaaaatgttcctttttaaagtttcaatgtgttgaatacacaatt 31375529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 385 - 502
Target Start/End: Complemental strand, 13845576 - 13845465
Alignment:
Q  385 taaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaagg 484  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |       || ||||||||||||| | || |||||||||||||||    
T  13845576 taaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-gac-----acgagacgtgtctgacacggagacacgccttatccaagg 13845483  T
Q  485 agtgtccgtgcttcatag 502  Q
    ||||||||||||||||||    
T  13845482 agtgtccgtgcttcatag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 437
Target Start/End: Original strand, 14028013 - 14028067
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgt 437  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14028013 gctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgt 14028067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 451
Target Start/End: Complemental strand, 8039876 - 8039820
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 451  Q
    ||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  8039876 agaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 391 - 504
Target Start/End: Original strand, 14209127 - 14209245
Alignment:
Q  391 ttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaagga 485  Q
    ||||| ||||||| | ||| ||||||||||| | ||||| |||||||||||||||||||||||     |||  ||||  ||||||| ||| ||||||| |    
T  14209127 ttttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaa 14209226  T
Q  486 gtgtccgtgcttcataggt 504  Q
    |||||||||||||||||||    
T  14209227 gtgtccgtgcttcataggt 14209245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 413 - 505
Target Start/End: Complemental strand, 41961673 - 41961576
Alignment:
Q  413 gtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggta 505  Q
    ||||||||| | ||||||||||||||||||| |||||||||     |||| ||||| |||| |||||| |||| || |||||||||||||||||||||    
T  41961673 gtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcataggta 41961576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 390 - 502
Target Start/End: Original strand, 35222951 - 35223057
Alignment:
Q  390 tttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgt 489  Q
    |||||||||||||| | ||| || |||||||||||||||||||||||    |   |  |||||||||||||||| |||| |||| |||||| ||||||||    
T  35222951 tttttagaaaatcacataattcaatgtaattatatgtgtcggtgtcg----gacat--gacacgtgtctgacacggggacacgctttatccgaggagtgt 35223044  T
Q  490 ccgtgcttcatag 502  Q
    |||||||||||||    
T  35223045 ccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 502
Target Start/End: Complemental strand, 34185162 - 34185052
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| | ||| ||||||||||| | ||||||||||||||||  ||||||||| |     |||| ||||| |||| |||||| |||| ||||||||||    
T  34185162 aaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtcc 34185063  T
Q  492 gtgcttcatag 502  Q
    |||||||||||    
T  34185062 gtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 507
Target Start/End: Original strand, 10455808 - 10455920
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtg 494  Q
    ||||||||||| ||   ||||||||||||||||| ||||||||||  ||||||  || ||||| ||||| |||| |||  | |||||||||||||  |||    
T  10455808 agaaaatcatataactaagtgtaattatatgtgttggtgtcgtgttagtgtcgagcatgtgtccgacactgggacacgtttaatccaaggagtgtatgtg 10455907  T
Q  495 cttcataggtact 507  Q
    |||||||| ||||    
T  10455908 cttcatagttact 10455920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 31732064 - 31732160
Alignment:
Q  3 ggcacttgttaaggattcaaaaga-ggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaattccc 98  Q
    |||||||||||||||||||||| | ||||||  || |||| | | |||| |||||||||  ||||||| |||||||| |||||||||||||| ||||    
T  31732064 ggcacttgttaaggattcaaaaaatggaaataattcataactttcatgttgaaaaagttgctttttgatgtttcaatatgttgaatacacaaatccc 31732160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11434826 - 11434881
Alignment:
Q  1 agggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaa 56  Q
    |||| |||||||||| ||||||||||||||||  ||| ||||||||||||||||||    
T  11434826 agggaacttgttaagaattcaaaagaggaaattatttgtaaatcttatgtagaaaa 11434881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 397 - 507
Target Start/End: Complemental strand, 15796333 - 15796218
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac-----gtgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||||| ||| ||||||||||| |  |||||||||||||| ||||||||||||     |||||  |||| || | |||||| |||||| |||||| |    
T  15796333 aaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttc 15796234  T
Q  492 gtgcttcataggtact 507  Q
    ||||||||||| ||||    
T  15796233 gtgcttcatagctact 15796218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 430 - 501
Target Start/End: Original strand, 15864880 - 15864950
Alignment:
Q  430 ggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcata 501  Q
    |||||||||||||   | |||||||||||||||| |||| |||||| |||||| ||||||||||||||||||    
T  15864880 ggtgtcgtgtcggacaccgacacgtgtctgacac-gggacacgcctaatccaaagagtgtccgtgcttcata 15864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 436
Target Start/End: Original strand, 2941575 - 2941617
Alignment:
Q  394 tagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  2941575 tagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcg 2941617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 16789032 - 16789086
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 451  Q
    ||||||||| ||| ||||||||||||| |||| ||||||||||| ||||||||||    
T  16789032 aaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggaca 16789086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 502
Target Start/End: Original strand, 20503530 - 20503584
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||| |||||||||| |||| |||||| |||| |||||||||||||||||||||    
T  20503530 gacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 21346991 - 21346910
Alignment:
Q  8 ttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaataca 90  Q
    ||||||| |||| ||||||||||||| |||| |||||||||  | ||||||||| ||||| || |||||||| ||||||||||    
T  21346991 ttgttaaagatttaaaagaggaaatgatttagaaatcttat-aaaaaaaagttcttttttaaattttcaatgggttgaataca 21346910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 502
Target Start/End: Original strand, 27505281 - 27505370
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||| | |||||||||||||||| |   || ||||||||| ||||| |||| | |||| |||| |||||||||||||||||||||    
T  27505281 agtgtaattacaagtgtcggtgtcgtgtctgacacg-acacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 42983991 - 42983913
Alignment:
Q  5 cacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgtt 83  Q
    |||||||||| |||||||||  ||||||| ||||||||| ||||||||  ||||||  ||||| || ||||||||||||    
T  42983991 cacttgttaatgattcaaaaatggaaatgatttataaattttatgtagtcaaagttactttttaaattttcaatgtgtt 42983913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 448 - 501
Target Start/End: Complemental strand, 16000004 - 15999951
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcata 501  Q
    |||||||||| ||||| |||| |||||| ||||||||||||||||||| |||||    
T  16000004 gacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 500
Target Start/End: Complemental strand, 4987330 - 4987222
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| | ||| ||||||||||| | |||| |||| ||||||||||| |     |||||||||| ||||| |||| |||||| |||| ||||||||||    
T  4987330 aaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtcc 4987231  T
Q  492 gtgcttcat 500  Q
    || ||||||    
T  4987230 gtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 448 - 500
Target Start/End: Original strand, 28918068 - 28918120
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcat 500  Q
    |||||||||| ||||| |||| |||||| ||||||||||||||| ||||||||    
T  28918068 gacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 32978155 - 32978099
Alignment:
Q  38 ataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaat 94  Q
    |||||| ||||||||||||| ||| |||||||||||| ||| |||||||| ||||||    
T  32978155 ataaattttatgtagaaaaaattcttttttgaagttttaatatgttgaatgcacaat 32978099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 411 - 463
Target Start/End: Complemental strand, 36272607 - 36272555
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgtgtctgacac 463  Q
    |||||||||||||| ||| |||||| ||| ||||||||||||||||| |||||    
T  36272607 cagtgtaattatatctgttggtgtcctgttggtgtcggacacgtgtccgacac 36272555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 506
Target Start/End: Complemental strand, 40993346 - 40993271
Alignment:
Q  436 gtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggtac 506  Q
    ||||||||||||||||||     |||| ||||| |||| |||||| |||| |||||||||| ||||||||||||||    
T  40993346 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcataggtac 40993271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 9596392 - 9596338
Alignment:
Q  36 ttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaataca 90  Q
    |||||||| | |||| |||||||||||||||| ||||||||  ||||||||||||    
T  9596392 ttataaatttgatgtggaaaaagttcatttttaaagtttcatggtgttgaataca 9596338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 436
Target Start/End: Original strand, 13414478 - 13414528
Alignment:
Q  386 aaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    |||| ||||||||||||| | ||| || |||||||||||||||||||||||    
T  13414478 aaatgttttagaaaatcaaataattcaatgtaattatatgtgtcggtgtcg 13414528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 445
Target Start/End: Original strand, 13806270 - 13806304
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgt 445  Q
    |||| ||||||||||||||||||||||||||||||    
T  13806270 cagtataattatatgtgtcggtgtcgtgtcggtgt 13806304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 16192775 - 16192733
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    |||||||||||||||||| | ||||||||||||||| ||||||    
T  16192775 cagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacg 16192733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 451
Target Start/End: Complemental strand, 17005658 - 17005604
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 451  Q
    ||||||||| ||| ||||||||||||| |||||||||| |||| |||||| ||||    
T  17005658 aaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagaca 17005604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 26554236 - 26554282
Alignment:
Q  47 atgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaa 93  Q
    ||||||||||||||  ||||||| |||||||||| ||||||||||||    
T  26554236 atgtagaaaaagttgttttttgatgtttcaatgtattgaatacacaa 26554282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 29386536 - 29386494
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||    
T  29386536 cagtgtaatcatatgtgtcggtgtcgtgtaggtatcggacacg 29386494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 448 - 502
Target Start/End: Original strand, 55401140 - 55401194
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||| ||||| | || |||||| |||| |||||||||||||||||||||    
T  55401140 gacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Original strand, 8383275 - 8383316
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||||| ||| ||||||||||||| ||||||||||||    
T  8383275 agaaaatcatataattcagtgtaattataagtgtcggtgtcg 8383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Original strand, 25093520 - 25093561
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 436  Q
    ||||||||| | ||| ||||||||||||||||||||||||||    
T  25093520 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 25093561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 504
Target Start/End: Original strand, 40052380 - 40052433
Alignment:
Q  451 acgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggt 504  Q
    ||||||| ||||| |||| |||||| |||| |||||||| ||||||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcataggt 40052433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 440
Target Start/End: Original strand, 25211574 - 25211602
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtc 440  Q
    |||||||||||||||||||||||||||||    
T  25211574 agtgtaattatatgtgtcggtgtcgtgtc 25211602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 31845047 - 31844959
Alignment:
Q  10 gttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaatacacaattccc 98  Q
    ||||||||||||||| |||||||  |||| |||| | |||||  |||| ||  ||||| ||||| |||| |||||||||||||| ||||    
T  31845047 gttaaggattcaaaaaaggaaataatttacaaatttaatgtatgaaaaattactttttaaagttccaatatgttgaatacacaaatccc 31844959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 45153627 - 45153551
Alignment:
Q  3 ggcacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatg 79  Q
    ||||||| |||||||| |||||| ||||||  || |||||| ||| ||||||||||||  ||| | |||||||||||    
T  45153627 ggcactttttaaggatacaaaagtggaaataattgataaattttaagtagaaaaagttactttataaagtttcaatg 45153551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 48600709 - 48600645
Alignment:
Q  22 aaagaggaaatggtttataaatcttatgtagaaaaagttcatttttgaagtttcaatgtgttgaa 86  Q
    |||||||||||  ||||||||| ||| ||||||||| ||  ||||| |||||||||||| |||||    
T  48600709 aaagaggaaataatttataaattttacgtagaaaaaattactttttaaagtttcaatgtattgaa 48600645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 383 - 443
Target Start/End: Original strand, 9904 - 9964
Alignment:
Q  383 gctaaattttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggt 443  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9904 gctaatttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgcgtcggt 9964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 448 - 504
Target Start/End: Original strand, 8666 - 8722
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggt 504  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  8666 gacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcataggt 8722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 502
Target Start/End: Original strand, 241629 - 241724
Alignment:
Q  412 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||  ||||||||||||||| |||||||||||||     |||| ||||| |||| |||||| |||| || ||||||||||||||||||    
T  241629 agtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 411 - 500
Target Start/End: Complemental strand, 9772 - 9678
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcat 500  Q
    ||||||||||||||||||||||||||||| |||||| ||||||     |||||||||  |||| |||  | |||| |||||||||||||||||||    
T  9772 cagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgcttcat 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 452
Target Start/End: Complemental strand, 44566 - 44509
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 452  Q
    ||||||||| | ||| |||||||||||||||||||||| |||||||||||| ||||||    
T  44566 agaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacac 44509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 495
Target Start/End: Original strand, 53198 - 53303
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcg-----gacacgtgtctgacacagggatacgccttatccaaggagtgt 489  Q
    ||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||     |||||||||| ||||| |||| |||  | ||||||| |||||    
T  53198 agaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgt 53297  T
Q  490 ccgtgc 495  Q
    ||||||    
T  53298 ccgtgc 53303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 504
Target Start/End: Original strand, 71745 - 71857
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcgg-----acacgtgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| | ||| |||||||||||   ||||| ||||||||||||||||||     ||||||||| ||||| |||| ||| || |||| |||||||||     
T  71745 aaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcg 71844  T
Q  492 gtgcttcataggt 504  Q
    |||||||||||||    
T  71845 gtgcttcataggt 71857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 502
Target Start/End: Complemental strand, 4875 - 4821
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    ||||| |||| |||||||||| |||||| |||| |||||||||||||||||||||    
T  4875 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 453
Target Start/End: Original strand, 23531 - 23587
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||| | ||| ||||||||||||| ||||| ||||||| |||||||||||||||    
T  23531 aaaatcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacg 23587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Original strand, 23440 - 23485
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcgg 442  Q
    ||||||| | ||| ||||||||||||| ||||||||||||||||||    
T  23440 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgg 23485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 503
Target Start/End: Complemental strand, 3888 - 3777
Alignment:
Q  397 aaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtcc 491  Q
    ||||||| | ||| ||||||||||| | ||||| ||||||||| |||||||||||||     |||| ||||  | || |||||| |||| ||||||||||    
T  3888 aaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtcc 3789  T
Q  492 gtgcttcatagg 503  Q
     |||||||||||    
T  3788 ttgcttcatagg 3777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 453
Target Start/End: Original strand, 137798 - 137856
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||| | ||| ||||||| | |||||||| ||||||||||| ||||||||||||    
T  137798 agaaaatcacacaattcagtgtagtcatatgtgttggtgtcgtgtcagtgtcggacacg 137856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 440
Target Start/End: Complemental strand, 135353 - 135308
Alignment:
Q  395 agaaaatcataaaatgcagtgtaattatatgtgtcggtgtcgtgtc 440  Q
    ||||||||| | ||| | ||||||||||||||||||||||||||||    
T  135353 agaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtc 135308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 104562 - 104612
Alignment:
Q  5 cacttgttaaggattcaaaagaggaaatggtttataaatcttatgtagaaa 55  Q
    ||||| |||||||||||||||| |||||| ||||||||| | |||||||||    
T  104562 cacttattaaggattcaaaagaagaaatgatttataaatttaatgtagaaa 104612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 263397 - 263355
Alignment:
Q  411 cagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||    
T  263397 cagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacg 263355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 502
Target Start/End: Complemental strand, 8645 - 8564
Alignment:
Q  426 tgtcggtgtcgtgtcggtgtcggacacg-----tgtctgacacagggatacgccttatccaaggagtgtccgtgcttcatag 502  Q
    |||||||||||||||||| |||||||||     |||| ||||| || | |||||| || | |||||||||||||||||||||    
T  8645 tgtcggtgtcgtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 505
Target Start/End: Original strand, 13471 - 13528
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggta 505  Q
    |||||| |||||||||  ||| || ||| |||||||||||||||||||||||| ||||    
T  13471 gacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcattggta 13528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 21082 - 21119
Alignment:
Q  416 taattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  21082 taattatatgtgtcggtatcgtgtcggtgtcagacacg 21119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 21211 - 21248
Alignment:
Q  416 taattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  21211 taattatatgtgtcggtatcgtgtcggtgtcagacacg 21248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Original strand, 21340 - 21377
Alignment:
Q  416 taattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  21340 taattatatgtgtcggtatcgtgtcggtgtcagacacg 21377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 505
Target Start/End: Complemental strand, 21856 - 21799
Alignment:
Q  448 gacacgtgtctgacacagggatacgccttatccaaggagtgtccgtgcttcataggta 505  Q
    |||||| |||||||||  ||| || ||| |||||||||||||||||||||||| ||||    
T  21856 gacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcattggta 21799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 503
Target Start/End: Original strand, 3384 - 3428
Alignment:
Q  459 gacacagggatacgccttatccaaggagtgtccgtgcttcatagg 503  Q
    ||||| |||| |||||| |||| ||||||||||||||||||||||    
T  3384 gacactgggacacgcctaatccgaggagtgtccgtgcttcatagg 3428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 453
Target Start/End: Complemental strand, 17903 - 17863
Alignment:
Q  413 gtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||||||||||||| ||||||||| ||||||| |||||||    
T  17903 gtgtaattatatgtgacggtgtcgtatcggtgttggacacg 17863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 417 - 453
Target Start/End: Original strand, 13453 - 13489
Alignment:
Q  417 aattatatgtgtcggtgtcgtgtcggtgtcggacacg 453  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  13453 aattacatgtgtcggggtcgtgtcggtgtcggacacg 13489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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