View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13777_high_95 (Length: 236)
Name: NF13777_high_95
Description: NF13777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13777_high_95 |
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Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 41237782 - 41237561
Alignment:
| Q |
1 |
ataaaagattaactgtaaactataaataaatggaactaatattagtggtcgggcctagcaaaaggaactagttctcgacaatgtgacgaacctaagttcg |
100 |
Q |
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| T |
41237782 |
ataaaagattaactgtaaactataaataaatggaactaatattagtggtcgggcctagcaaaaggaactagttctcgacaatgtgacgaacctaagttca |
41237683 |
T |
|
| Q |
101 |
aattcttgctggaaaaggcagccacatttagtacgtgacgacccc-cgaccccttccaccctccatttgtgtaattatctgtcttttccgtatccaaact |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41237682 |
aattcttgctggaaaaggcagccacatttagtacgtgacgacccctcgaccccttccaccctccatttgtgtaattatctgtcttttccgtatccaaact |
41237583 |
T |
|
| Q |
200 |
ttaagtgtataagggtgctttg |
221 |
Q |
| |
|
|||||||||||||||||||||| |
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| T |
41237582 |
ttaagtgtataagggtgctttg |
41237561 |
T |
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