View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13777_high_99 (Length: 232)
Name: NF13777_high_99
Description: NF13777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13777_high_99 |
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Alignment Details
Target: chr2 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 17281078 - 17281230
Alignment:
| Q |
25 |
cactgtatttgatcaagtacacttgaatctaccgccacttctaaaccaaattaactgaattatgactctaattccaattgtcagagagtcaagagagata |
124 |
Q |
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| T |
17281078 |
cactatatttgatcaagtacacttgaatctaccgccacttctcaaccaaattaactgaattatgactctaattccaattgtcggagagtcaagagagata |
17281177 |
T |
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| Q |
125 |
acaccatgagctacaataggccggctaaaacataaatcactaagaaaccttga |
177 |
Q |
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|||||||||||||||||||||| | ||||||||||||| |||||||||||| |
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| T |
17281178 |
acaccatgagctacaataggccagtataaacataaatcaccaagaaaccttga |
17281230 |
T |
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