View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13777_low_4 (Length: 618)

Name: NF13777_low_4
Description: NF13777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13777_low_4
NF13777_low_4
[»] chr5 (14 HSPs)
chr5 (9-211)||(3234726-3234926)
chr5 (319-448)||(3236594-3236723)
chr5 (472-603)||(3236751-3236883)
chr5 (259-318)||(26888933-26888987)
chr5 (44-105)||(29598383-29598444)
chr5 (259-318)||(435560-435614)
chr5 (259-318)||(16670026-16670080)
chr5 (259-318)||(24100698-24100752)
chr5 (259-318)||(27098546-27098600)
chr5 (259-318)||(27851041-27851095)
chr5 (259-318)||(29962179-29962233)
chr5 (259-318)||(30012565-30012619)
chr5 (259-318)||(38312331-38312385)
chr5 (251-318)||(16669503-16669566)
[»] chr7 (38 HSPs)
chr7 (18-119)||(18325376-18325477)
chr7 (35-118)||(22020536-22020619)
chr7 (18-105)||(16840186-16840273)
chr7 (18-105)||(16847269-16847356)
chr7 (27-113)||(22027807-22027893)
chr7 (46-119)||(22039442-22039515)
chr7 (50-118)||(22036248-22036316)
chr7 (24-105)||(16841739-16841820)
chr7 (259-323)||(13965046-13965105)
chr7 (259-318)||(37373972-37374026)
chr7 (36-94)||(22087779-22087837)
chr7 (245-318)||(45456725-45456794)
chr7 (259-315)||(17489523-17489574)
chr7 (259-315)||(17563640-17563691)
chr7 (259-318)||(3217752-3217806)
chr7 (287-318)||(7776486-7776517)
chr7 (259-318)||(7776955-7777009)
chr7 (259-318)||(18458773-18458827)
chr7 (259-318)||(20493751-20493805)
chr7 (287-318)||(22570120-22570151)
chr7 (287-318)||(23440490-23440521)
chr7 (259-318)||(24733635-24733689)
chr7 (259-318)||(27284248-27284302)
chr7 (259-318)||(27284607-27284661)
chr7 (287-318)||(29933708-29933739)
chr7 (259-318)||(31852080-31852134)
chr7 (287-318)||(32072327-32072358)
chr7 (259-318)||(36720991-36721045)
chr7 (259-318)||(37374455-37374509)
chr7 (259-318)||(39143509-39143563)
chr7 (244-318)||(40851760-40851830)
chr7 (259-318)||(40852158-40852212)
chr7 (259-318)||(47987333-47987387)
chr7 (241-318)||(29414490-29414563)
chr7 (259-318)||(44332209-44332265)
chr7 (250-289)||(3217226-3217266)
chr7 (259-315)||(42287317-42287368)
chr7 (259-315)||(45457105-45457156)
[»] chr2 (12 HSPs)
chr2 (35-114)||(10206230-10206311)
chr2 (259-318)||(18470068-18470122)
chr2 (259-318)||(2970815-2970869)
chr2 (259-318)||(4602815-4602869)
chr2 (259-318)||(11713995-11714049)
chr2 (287-318)||(14287860-14287891)
chr2 (259-318)||(31557097-31557151)
chr2 (259-318)||(32194448-32194502)
chr2 (259-318)||(32194827-32194881)
chr2 (259-318)||(34618520-34618574)
chr2 (249-318)||(39109501-39109566)
chr2 (259-315)||(26424825-26424876)
[»] chr8 (21 HSPs)
chr8 (259-318)||(2620244-2620302)
chr8 (247-318)||(2221587-2221654)
chr8 (259-318)||(762169-762223)
chr8 (248-318)||(45123214-45123280)
chr8 (259-318)||(22595143-22595199)
chr8 (250-318)||(26060102-26060166)
chr8 (259-318)||(761399-761453)
chr8 (259-318)||(2221964-2222018)
chr8 (259-318)||(7116478-7116532)
chr8 (259-318)||(9739783-9739837)
chr8 (259-318)||(11713206-11713260)
chr8 (259-318)||(13089444-13089498)
chr8 (259-318)||(22013468-22013522)
chr8 (259-318)||(27786483-27786537)
chr8 (259-318)||(31445675-31445729)
chr8 (259-318)||(41154623-41154677)
chr8 (259-318)||(41155012-41155066)
chr8 (259-318)||(42193785-42193839)
chr8 (287-318)||(45433783-45433814)
chr8 (259-318)||(41836499-41836554)
chr8 (247-318)||(43633587-43633654)
[»] chr4 (24 HSPs)
chr4 (248-318)||(1098047-1098113)
chr4 (259-318)||(26673121-26673175)
chr4 (259-318)||(28505071-28505125)
chr4 (259-318)||(41845870-41845924)
chr4 (250-318)||(41610123-41610187)
chr4 (251-318)||(17475881-17475944)
chr4 (287-318)||(9181946-9181977)
chr4 (259-318)||(17475403-17475457)
chr4 (259-318)||(20614614-20614668)
chr4 (259-318)||(25618442-25618496)
chr4 (259-318)||(31487984-31488038)
chr4 (259-318)||(34237487-34237541)
chr4 (259-318)||(42369507-42369561)
chr4 (259-318)||(46058701-46058755)
chr4 (259-318)||(48453639-48453693)
chr4 (259-318)||(48454003-48454057)
chr4 (287-318)||(52574704-52574735)
chr4 (259-318)||(56271214-56271268)
chr4 (259-318)||(11649510-11649565)
chr4 (245-318)||(24045356-24045425)
chr4 (245-318)||(43291959-43292028)
chr4 (46-107)||(11971848-11971909)
chr4 (246-318)||(46307548-46307616)
chr4 (247-318)||(14525935-14526002)
[»] chr1 (20 HSPs)
chr1 (248-318)||(46448739-46448805)
chr1 (251-318)||(3798321-3798384)
chr1 (251-318)||(50227912-50227975)
chr1 (259-318)||(3798708-3798762)
chr1 (287-318)||(14244195-14244226)
chr1 (259-318)||(14244558-14244612)
chr1 (259-318)||(24370121-24370175)
chr1 (259-318)||(31488031-31488085)
chr1 (259-318)||(34023572-34023626)
chr1 (259-318)||(37483060-37483114)
chr1 (259-318)||(37483541-37483595)
chr1 (259-318)||(38980052-38980106)
chr1 (259-318)||(44114516-44114570)
chr1 (259-318)||(45678718-45678772)
chr1 (259-318)||(46448223-46448277)
chr1 (259-318)||(50138501-50138555)
chr1 (259-317)||(49548606-49548663)
chr1 (249-318)||(50227510-50227575)
chr1 (259-315)||(6714704-6714755)
chr1 (251-318)||(15073412-15073475)
[»] scaffold0027 (1 HSPs)
scaffold0027 (287-318)||(124966-124997)
[»] scaffold0005 (1 HSPs)
scaffold0005 (259-318)||(1481-1535)
[»] scaffold0002 (1 HSPs)
scaffold0002 (259-318)||(283172-283226)
[»] chr6 (10 HSPs)
chr6 (259-318)||(14527515-14527569)
chr6 (259-318)||(17383741-17383795)
chr6 (259-318)||(21271492-21271546)
chr6 (259-318)||(21272117-21272171)
chr6 (259-318)||(22498765-22498819)
chr6 (259-318)||(26392843-26392897)
chr6 (259-318)||(31739913-31739967)
chr6 (257-318)||(34751939-34751995)
chr6 (251-318)||(9424906-9424969)
chr6 (259-315)||(17383934-17383985)
[»] chr3 (8 HSPs)
chr3 (259-318)||(12739884-12739938)
chr3 (259-318)||(12739970-12740024)
chr3 (259-318)||(24242995-24243049)
chr3 (259-318)||(45940221-45940275)
chr3 (287-318)||(48946206-48946237)
chr3 (261-318)||(27990270-27990322)
chr3 (261-318)||(40503730-40503782)
chr3 (287-323)||(588282-588318)


Alignment Details
Target: chr5 (Bit Score: 165; Significance: 6e-88; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 9 - 211
Target Start/End: Original strand, 3234726 - 3234926
Alignment:
Q  9 atgaaggcattccaagatttacagcagcacttcattcgcatcagagattt--cacaggaaggaaagaaagcacttctgtgataagttctacagggaggat 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3234726 atgaaggcattccaagatttacagcagcacttcattcgcatcagagatttttcacaggaaggaaagaaagcacttctgtgataagttctacagggaggat 3234825  T
Q  107 tatcggcgatgacacagcgtaccgacactgcaatttcggttgtgggagggagattcacgagagaggcgttgtctatggaagaaaaaattgctatttagag 206  Q
    ||||||||||||||||||||||||||||||| ||||||||    || |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3234826 tatcggcgatgacacagcgtaccgacactgcgatttcggt----ggtgggagattcatgagagaggcgttgtctatggaagaaaaaattgctatttagag 3234921  T
Q  207 gtaat 211  Q
    |||||    
T  3234922 gtaat 3234926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 319 - 448
Target Start/End: Original strand, 3236594 - 3236723
Alignment:
Q  319 tttaagaatagttaaatttcatatttgtgtgcgtggtgcagtttgtcatatttgtgatgttcgcaatcttcaatgaaaccaaacatcagcaataacaaac 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3236594 tttaagaatagttaaatttcatatttgtgtgcgtggtgcagtttgtcatatttgtgatgttcgcaatcttcaatgaaactaaacatcagcaataacaaac 3236693  T
Q  419 ccaaacctgttcttcaagacatgctcagta 448  Q
    ||||||||||||||||||||||||||||||    
T  3236694 ccaaacctgttcttcaagacatgctcagta 3236723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 472 - 603
Target Start/End: Original strand, 3236751 - 3236883
Alignment:
Q  472 agcattgcattgtatgattctgatttttataagcttt-tttacttctgtgacagattctgaggtctgttacctccctccattctcaatccccaaatcatc 570  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3236751 agcattgcattgtatgattctgatttttataagctttatttacttctgtgacagattctgaggtctgttacctccctccattctcaatccccaaatcatc 3236850  T
Q  571 ttcctcatctcaaatctcctaaatcttgttatt 603  Q
    |||||||||||||||||||||||||||||||||    
T  3236851 ttcctcatctcaaatctcctaaatcttgttatt 3236883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 26888987 - 26888933
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     ||||||||||||||||||||||||    
T  26888987 aatgctcttttggtcccttaactatttaatt-----gatatcgctttggtcccttaacta 26888933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 29598383 - 29598444
Alignment:
Q  44 tcgcatcagagatttcacaggaaggaaagaaagcacttctgtgataagttctacagggagga 105  Q
    |||||||||||||| |||||||||||| ||||| ||||||| ||| |||||  |||||||||    
T  29598383 tcgcatcagagattgcacaggaaggaatgaaaggacttctgcgatgagttcatcagggagga 29598444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 435560 - 435614
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  435560 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 435614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 16670080 - 16670026
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  16670080 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 16670026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 24100752 - 24100698
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  24100752 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 24100698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 27098546 - 27098600
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  27098546 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 27098600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 27851095 - 27851041
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  27851095 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 27851041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 29962233 - 29962179
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  29962233 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 29962179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 30012565 - 30012619
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  30012565 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 30012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 38312331 - 38312385
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  38312331 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 38312385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 16669503 - 16669566
Alignment:
Q  251 taaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||||||||| ||||||||| || ||||||||||||||||     | ||||||||||||||||||||||    
T  16669503 taaggcttaaatgctcttttggttccttaactatttaatt-----ggtatcgctttggtcccttaacta 16669566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 4e-24; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 18325477 - 18325376
Alignment:
Q  18 ttccaagatttacagcagcacttcattcgcatcagagatttcacaggaaggaaagaaagcacttctgtgataagttctacagggaggattatcggcgatg 117  Q
    ||||| |||||||| |||||||| | | |||| |||||||||||||||||  |||||||||||||||||||||||||  | |||||||||||||||||||    
T  18325477 ttccatgatttacaacagcactttagttgcataagagatttcacaggaagataagaaagcacttctgtgataagttcatcggggaggattatcggcgatg 18325378  T
Q  118 ac 119  Q
    ||    
T  18325377 ac 18325376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 22020619 - 22020536
Alignment:
Q  35 gcacttcattcgcatcagagatttcacaggaaggaaagaaagcacttctgtgataagttctacagggaggattatcggcgatga 118  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||  ||  ||||||| ||||||||||||||    
T  22020619 gcacttcattcgcatcagagatttcactggaaggaaagaaagcagttctgtgataatctcatcagggagaattatcggcgatga 22020536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 16840186 - 16840273
Alignment:
Q  18 ttccaagatttacagcagcacttcattcgcatcagagatttcacaggaaggaaagaaagcacttctgtgataagttctacagggagga 105  Q
    ||||| |||||||||||| || ||| |||||| |||| ||||||||||||||||||||||||||||  |||||||||  |||||||||    
T  16840186 ttccacgatttacagcaggacctcagtcgcataagagttttcacaggaaggaaagaaagcacttctacgataagttcgtcagggagga 16840273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 16847269 - 16847356
Alignment:
Q  18 ttccaagatttacagcagcacttcattcgcatcagagatttcacaggaaggaaagaaagcacttctgtgataagttctacagggagga 105  Q
    ||||| |||||||||||| || ||| |||||| |||| ||| ||||||||||||||||||||||||  |||||||||  |||||||||    
T  16847269 ttccacgatttacagcaggacctcagtcgcataagagttttaacaggaaggaaagaaagcacttctacgataagttcgtcagggagga 16847356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 22027893 - 22027807
Alignment:
Q  27 ttacagcagcacttcattcgcatcagagatttcacaggaaggaaagaaagcacttctgtgataagttctacagggaggattatcggc 113  Q
    ||||| |||||||| | ||| ||||||||||| || ||||| |||||||||| |||||||||||||||  |||| ||||||||||||    
T  22027893 ttacaacagcacttgaatcggatcagagatttgacgggaagaaaagaaagcagttctgtgataagttcgtcaggaaggattatcggc 22027807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 22039515 - 22039442
Alignment:
Q  46 gcatcagagatttcacaggaaggaaagaaagcacttctgtgataagttctacagggaggattatcggcgatgac 119  Q
    ||||||||||||| || |||||||||||||||| |||||||||||  ||  ||||||||||||||||| |||||    
T  22039515 gcatcagagatttgaccggaaggaaagaaagcagttctgtgataatctcatcagggaggattatcggcaatgac 22039442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 22036316 - 22036248
Alignment:
Q  50 cagagatttcacaggaaggaaagaaagcacttctgtgataagttctacagggaggattatcggcgatga 118  Q
    ||||||||| || |||||||||||||||| |||||||||||| || | ||||||||||||||| |||||    
T  22036316 cagagatttgaccggaaggaaagaaagcagttctgtgataaggtcaagagggaggattatcggtgatga 22036248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 16841739 - 16841820
Alignment:
Q  24 gatttacagcagcacttcattcgcatcagagatttcacaggaaggaaagaaagcacttctgtgataagttctacagggagga 105  Q
    |||||||||||| || | | |||||| |||| ||||||||||||||||||||||||||||  |||||| ||  |||||||||    
T  16841739 gatttacagcaggaccttagtcgcataagagttttcacaggaaggaaagaaagcacttctacgataaggtcgtcagggagga 16841820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 323
Target Start/End: Original strand, 13965046 - 13965105
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaactatttaa 323  Q
    ||||||||||| |||||||||||||||||||     | |||||||||||||||||||||||||||    
T  13965046 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaactatttaa 13965105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 37373972 - 37374026
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||     ||||||||||||||||||||||||||||    
T  37373972 aatgctcttttggtcccttaactattt-----aattgatatcgctttggtcccttaacta 37374026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 22087837 - 22087779
Alignment:
Q  36 cacttcattcgcatcagagatttcacaggaaggaaagaaagcacttctgtgataagttc 94  Q
    |||||||  ||||| |||||||| |||| |||||| |||||||||||||||||||||||    
T  22087837 cacttcagccgcatgagagatttgacagaaaggaaggaaagcacttctgtgataagttc 22087779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 45456725 - 45456794
Alignment:
Q  245 tttatttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  45456725 tttaattaaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 45456794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 17489523 - 17489574
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaa 315  Q
    ||||||||||| |||||||||||||||     |||||||||||||||||||||||||    
T  17489523 aatgctcttttggtcccttaactattt-----aattgatatcgctttggtcccttaa 17489574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 17563691 - 17563640
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaa 315  Q
    ||||||||||| |||||||||||||||||||     |||||||||||||||||||||    
T  17563691 aatgctcttttggtcccttaactatttaatt-----gatatcgctttggtcccttaa 17563640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 3217806 - 3217752
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  3217806 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 3217752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 318
Target Start/End: Original strand, 7776486 - 7776517
Alignment:
Q  287 atttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||||||||||||||||||||||    
T  7776486 atttaattgatatcgctttggtcccttaacta 7776517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 7777009 - 7776955
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  7777009 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 7776955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 18458827 - 18458773
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  18458827 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 18458773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 20493751 - 20493805
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  20493751 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 20493805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 318
Target Start/End: Complemental strand, 22570151 - 22570120
Alignment:
Q  287 atttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||||||||||||||||||||||    
T  22570151 atttaattgatatcgctttggtcccttaacta 22570120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 318
Target Start/End: Original strand, 23440490 - 23440521
Alignment:
Q  287 atttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||||||||||||||||||||||    
T  23440490 atttaattgatatcgctttggtcccttaacta 23440521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 24733635 - 24733689
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  24733635 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 24733689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 27284248 - 27284302
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  27284248 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 27284302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 27284661 - 27284607
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  27284661 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 27284607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 318
Target Start/End: Complemental strand, 29933739 - 29933708
Alignment:
Q  287 atttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||||||||||||||||||||||    
T  29933739 atttaattgatatcgctttggtcccttaacta 29933708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 31852134 - 31852080
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  31852134 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 31852080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 318
Target Start/End: Original strand, 32072327 - 32072358
Alignment:
Q  287 atttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||||||||||||||||||||||    
T  32072327 atttaattgatatcgctttggtcccttaacta 32072358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 36721045 - 36720991
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| ||||||||| |     ||||||||||||||||||||||||||||||||    
T  36721045 aatgctcttttggtcccttaagt-----atttaattgatatcgctttggtcccttaacta 36720991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 37374509 - 37374455
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  37374509 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 37374455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 39143563 - 39143509
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  39143563 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 39143509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 318
Target Start/End: Original strand, 40851760 - 40851830
Alignment:
Q  244 atttatttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||||     | |||||||||||| |||||||||    
T  40851760 atttattttaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttggttccttaacta 40851830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 40852212 - 40852158
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  40852212 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 40852158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 47987333 - 47987387
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  47987333 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 47987387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 29414563 - 29414490
Alignment:
Q  241 tttatttatttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| || ||||| ||||||||| ||||||||||||||||||      | ||||||||||||||||||||||    
T  29414563 tttatttattttagacttaaatgctcttttggtcccttaactatttaata-----ggtatcgctttggtcccttaacta 29414490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 44332209 - 44332265
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| ||| ||||| |||   ||||||||||||||| ||||||||||||||||    
T  44332209 aatgctcttttagtctcttaagtat---atttaattgatatcgttttggtcccttaacta 44332265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 289
Target Start/End: Original strand, 3217226 - 3217266
Alignment:
Q  250 ttaaggcttaa-tgctcttttcgtcccttaactatttaatt 289  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  3217226 ttaaggcttaaatgctcttttggtcccttaactatttaatt 3217266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 42287317 - 42287368
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaa 315  Q
    ||||||||||| |||||||||||||||||||     | |||||||||||||||||||    
T  42287317 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaa 42287368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 45457156 - 45457105
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaa 315  Q
    ||||||||||| |||||||||||||||||||     | |||||||||||||||||||    
T  45457156 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaa 45457105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 10206230 - 10206311
Alignment:
Q  35 gcacttcattcgcatcagagatttcacaggaaggaaagaaagcacttc--tgtgataagttctacagggaggattatcggcg 114  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||||  | ||||||||||  ||||||||||||||||||    
T  10206230 gcacttcagtcgcattagagatttcacgggaaggaaagaaagcacttctatatgataagttcgtcagggaggattatcggcg 10206311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 18470122 - 18470068
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     ||||||||||||||||||||||||    
T  18470122 aatgctcttttggtcccttaactatttaatt-----gatatcgctttggtcccttaacta 18470068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 2970869 - 2970815
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  2970869 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 2970815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 4602869 - 4602815
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  4602869 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 4602815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 11714049 - 11713995
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||| |||||| |||||||||||||||     ||||||||||||||||||||||||||||    
T  11714049 aatgttcttttggtcccttaactattt-----aattgatatcgctttggtcccttaacta 11713995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 318
Target Start/End: Original strand, 14287860 - 14287891
Alignment:
Q  287 atttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||||||||||||||||||||||    
T  14287860 atttaattgatatcgctttggtcccttaacta 14287891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 31557097 - 31557151
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  31557097 aatgctcttttagtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 31557151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 32194448 - 32194502
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  32194448 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 32194502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 32194881 - 32194827
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  32194881 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 32194827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 34618574 - 34618520
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  34618574 aatgctcttttagtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 34618520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 39109566 - 39109501
Alignment:
Q  249 tttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||||||||||| |||||| || |||||||||||||||||||     | ||||||||||||||||||||||    
T  39109566 tttaaggcttaaatgctctattggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 39109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 26424876 - 26424825
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaa 315  Q
    ||||||||||| |||||||||||||||||||     | |||||||||||||||||||    
T  26424876 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaa 26424825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 2620244 - 2620302
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| ||||||||||||| || |||||||| ||||||||||||||||||||||    
T  2620244 aatgctcttttggtcccttaactatata-tttaattggtatcgctttggtcccttaacta 2620302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 2221587 - 2221654
Alignment:
Q  247 tatttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||||||||||||| ||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  2221587 tatttaaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 2221654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 762223 - 762169
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     ||||||||||||||||||||||||    
T  762223 aatgctcttttggtcccttaactatttaatt-----gatatcgctttggtcccttaacta 762169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 45123214 - 45123280
Alignment:
Q  248 atttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||| ||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  45123214 atttaaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 45123280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 22595199 - 22595143
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| ||||||||| |||||   ||| ||||||||||||||||||||||||||    
T  22595199 aatgctcttttggtcccttaaatattt---ttatttgatatcgctttggtcccttaacta 22595143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 26060102 - 26060166
Alignment:
Q  250 ttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| ||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  26060102 ttaaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 26060166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 761399 - 761453
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  761399 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 761453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 2222018 - 2221964
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  2222018 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 2221964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 7116478 - 7116532
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  7116478 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 7116532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 9739837 - 9739783
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  9739837 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 9739783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 11713206 - 11713260
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  11713206 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 11713260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 13089444 - 13089498
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  13089444 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 13089498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 22013468 - 22013522
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  22013468 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 22013522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 27786537 - 27786483
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  27786537 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 27786483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 31445675 - 31445729
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  31445675 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 31445729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 41154623 - 41154677
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  41154623 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 41154677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 41155066 - 41155012
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  41155066 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 41155012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 42193785 - 42193839
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  42193785 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 42193839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 318
Target Start/End: Original strand, 45433783 - 45433814
Alignment:
Q  287 atttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||||||||||||||||||||||    
T  45433783 atttaattgatatcgctttggtcccttaacta 45433814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 41836499 - 41836554
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| ||||||||||||    ||||||||| ||||||||||| ||||||||||    
T  41836499 aatgctcttttagtcccttaacta----atttaattggtatcgctttggacccttaacta 41836554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 43633654 - 43633587
Alignment:
Q  247 tatttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||||||||||||| ||| |||||  ||||||||||||||||||     | ||||||||||||||||||||||    
T  43633654 tatttaaggcttaaatgcacttttgatcccttaactatttaatt-----ggtatcgctttggtcccttaacta 43633587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000006; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 1098047 - 1098113
Alignment:
Q  248 atttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||| ||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  1098047 atttaaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 1098113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 26673175 - 26673121
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     ||||||||||||||||||||||||    
T  26673175 aatgctcttttggtcccttaactatttaatt-----gatatcgctttggtcccttaacta 26673121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 28505125 - 28505071
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     ||||||||||||||||||||||||    
T  28505125 aatgctcttttggtcccttaactatttaatt-----gatatcgctttggtcccttaacta 28505071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 41845924 - 41845870
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     ||||||||||||||||||||||||    
T  41845924 aatgctcttttggtcccttaactatttaatt-----gatatcgctttggtcccttaacta 41845870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 41610123 - 41610187
Alignment:
Q  250 ttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| ||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  41610123 ttaaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 41610187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 17475944 - 17475881
Alignment:
Q  251 taaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||||||||| ||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  17475944 taaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 17475881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 318
Target Start/End: Complemental strand, 9181977 - 9181946
Alignment:
Q  287 atttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||||||||||||||||||||||    
T  9181977 atttaattgatatcgctttggtcccttaacta 9181946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 17475403 - 17475457
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  17475403 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 17475457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 20614668 - 20614614
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  20614668 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 20614614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 25618442 - 25618496
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  25618442 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 25618496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 31487984 - 31488038
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  31487984 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 31488038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 34237487 - 34237541
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  34237487 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 34237541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 42369561 - 42369507
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  42369561 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 42369507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 46058701 - 46058755
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  46058701 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 46058755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 48453639 - 48453693
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  48453639 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 48453693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 48454057 - 48454003
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     |||||| |||||||||||||||||    
T  48454057 aatgctcttttggtcccttaactatttaatt-----gatatcactttggtcccttaacta 48454003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 318
Target Start/End: Original strand, 52574704 - 52574735
Alignment:
Q  287 atttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||||||||||||||||||||||    
T  52574704 atttaattgatatcgctttggtcccttaacta 52574735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 56271268 - 56271214
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  56271268 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 56271214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 11649510 - 11649565
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| ||||||||||||    ||||||||| ||||||||||| ||||||||||    
T  11649510 aatgctcttttagtcccttaacta----atttaattggtatcgctttggacccttaacta 11649565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 24045356 - 24045425
Alignment:
Q  245 tttatttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||     | ||||||||||||| ||||||||    
T  24045356 tttattttaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtctcttaacta 24045425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 43292028 - 43291959
Alignment:
Q  245 tttatttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||||     | |||| |||||||||||||||||    
T  43292028 tttattaaaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcactttggtcccttaacta 43291959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 11971848 - 11971909
Alignment:
Q  46 gcatcagagatttcacaggaaggaaagaaagcacttctgtgataagttctacagggaggatt 107  Q
    |||| |||||||| || |||||||| ||||||||||||| |||||| ||  |||||||||||    
T  11971848 gcatgagagatttgaccggaaggaaggaaagcacttctgcgataagctcgtcagggaggatt 11971909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 46307548 - 46307616
Alignment:
Q  246 ttatttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||     | |||||||||| |||||||||||    
T  46307548 ttattaaaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttgatcccttaacta 46307616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 14526002 - 14525935
Alignment:
Q  247 tatttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||| ||||||||| |||||||||  ||||||||||||||||||     | ||||||||||||||||||||||    
T  14526002 tattaaaggcttaaatgctcttttgatcccttaactatttaatt-----ggtatcgctttggtcccttaacta 14525935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000006; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 46448805 - 46448739
Alignment:
Q  248 atttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||| ||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  46448805 atttaaggcttaaatgctcttttagtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 46448739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 3798321 - 3798384
Alignment:
Q  251 taaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||||||||| ||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  3798321 taaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 3798384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 50227975 - 50227912
Alignment:
Q  251 taaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||||||||| ||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  50227975 taaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 50227912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 3798762 - 3798708
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  3798762 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 3798708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 318
Target Start/End: Original strand, 14244195 - 14244226
Alignment:
Q  287 atttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||||||||||||||||||||||    
T  14244195 atttaattgatatcgctttggtcccttaacta 14244226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 14244612 - 14244558
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  14244612 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 14244558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 24370121 - 24370175
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  24370121 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 24370175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 31488031 - 31488085
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  31488031 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 31488085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 34023626 - 34023572
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  34023626 aatgctcttttagtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 34023572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 37483060 - 37483114
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  37483060 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 37483114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 37483595 - 37483541
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  37483595 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 37483541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 38980106 - 38980052
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  38980106 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 38980052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 44114570 - 44114516
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  44114570 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 44114516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 45678718 - 45678772
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  45678718 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 45678772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 46448223 - 46448277
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  46448223 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 46448277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 50138501 - 50138555
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  50138501 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 50138555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 49548663 - 49548606
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaact 317  Q
    |||||||||||  |||||||||||||||| ||||||| ||||| |||||| ||||||||    
T  49548663 aatgctcttttgatcccttaactatttaa-ttaattggtatcgttttggttccttaact 49548606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 318
Target Start/End: Original strand, 50227510 - 50227575
Alignment:
Q  249 tttaaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||||||||||| ||||||||| |||||||||||||||||||     | ||||||||||| ||||||||||    
T  50227510 tttaaggcttaaatgctcttttggtcccttaactatttaatt-----ggtatcgctttggccccttaacta 50227575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 6714755 - 6714704
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaa 315  Q
    ||||||||||| |||||||||||||||||||     | |||||||||||||||||||    
T  6714755 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaa 6714704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 318
Target Start/End: Original strand, 15073412 - 15073475
Alignment:
Q  251 taaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||||||||| |||||||||  ||||||||||||||||||     | ||||||||||||||||||||||    
T  15073412 taaggcttaaatgctcttttgatcccttaactatttaatt-----ggtatcgctttggtcccttaacta 15073475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 318
Target Start/End: Original strand, 124966 - 124997
Alignment:
Q  287 atttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||||||||||||||||||||||    
T  124966 atttaattgatatcgctttggtcccttaacta 124997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 1481 - 1535
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  1481 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 1535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 283226 - 283172
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  283226 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 283172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 14527569 - 14527515
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  14527569 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 14527515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 17383741 - 17383795
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  17383741 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 17383795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 21271492 - 21271546
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  21271492 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 21271546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 21272171 - 21272117
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  21272171 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 21272117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 22498819 - 22498765
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  22498819 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 22498765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 26392897 - 26392843
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  26392897 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 26392843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 31739967 - 31739913
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  31739967 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 31739913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 34751995 - 34751939
Alignment:
Q  257 ttaatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||| |||||||||||||||     ||||||||||  ||||||||||||||||    
T  34751995 ttaatgctcttttggtcccttaactattt-----aattgatatcattttggtcccttaacta 34751939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 9424969 - 9424906
Alignment:
Q  251 taaggcttaa-tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    |||||||||| ||||||||| || ||||||||||||||||     | ||||||||||||||||||||||    
T  9424969 taaggcttaaatgctcttttggtgccttaactatttaatt-----ggtatcgctttggtcccttaacta 9424906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 315
Target Start/End: Complemental strand, 17383985 - 17383934
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaa 315  Q
    ||||||||||| |||||||||||||||||||     | |||||||||||||||||||    
T  17383985 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaa 17383934  T

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Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 12739884 - 12739938
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  12739884 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 12739938  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 12739970 - 12740024
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  12739970 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 12740024  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 24243049 - 24242995
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  24243049 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 24242995  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 45940221 - 45940275
Alignment:
Q  259 aatgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  45940221 aatgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 45940275  T

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Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 318
Target Start/End: Original strand, 48946206 - 48946237
Alignment:
Q  287 atttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||||||||||||||||||||||||||    
T  48946206 atttaattgatatcgctttggtcccttaacta 48946237  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 27990322 - 27990270
Alignment:
Q  261 tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  27990322 tgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 27990270  T

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Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 40503782 - 40503730
Alignment:
Q  261 tgctcttttcgtcccttaactatttaatttaattgatatcgctttggtcccttaacta 318  Q
    ||||||||| |||||||||||||||||||     | ||||||||||||||||||||||    
T  40503782 tgctcttttggtcccttaactatttaatt-----ggtatcgctttggtcccttaacta 40503730  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 588282 - 588318
Alignment:
Q  287 atttaattgatatcgctttggtcccttaactatttaa 323  Q
    |||||||| |||||| |||||||||||||||||||||    
T  588282 atttaattaatatcgttttggtcccttaactatttaa 588318  T

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