View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13777_low_49 (Length: 370)

Name: NF13777_low_49
Description: NF13777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13777_low_49
NF13777_low_49
[»] chr2 (43 HSPs)
chr2 (104-279)||(41935565-41935740)
chr2 (92-281)||(4289527-4289716)
chr2 (92-280)||(15234198-15234386)
chr2 (91-279)||(35048513-35048700)
chr2 (92-275)||(29546124-29546307)
chr2 (98-279)||(25424643-25424824)
chr2 (98-279)||(33867580-33867761)
chr2 (112-259)||(8027500-8027648)
chr2 (94-270)||(31440666-31440842)
chr2 (92-279)||(667999-668186)
chr2 (104-279)||(2656687-2656862)
chr2 (94-269)||(3329090-3329265)
chr2 (106-240)||(15161915-15162049)
chr2 (98-279)||(32422775-32422956)
chr2 (121-280)||(44070462-44070622)
chr2 (92-279)||(20936936-20937121)
chr2 (122-279)||(11788513-11788669)
chr2 (98-279)||(38620281-38620462)
chr2 (98-281)||(4480949-4481126)
chr2 (172-280)||(25667355-25667463)
chr2 (92-214)||(4592222-4592344)
chr2 (94-279)||(23231626-23231805)
chr2 (151-279)||(42968915-42969049)
chr2 (104-228)||(39767171-39767294)
chr2 (168-279)||(44928791-44928902)
chr2 (166-268)||(12345599-12345698)
chr2 (166-250)||(8753763-8753847)
chr2 (92-228)||(29155256-29155392)
chr2 (92-279)||(16711371-16711559)
chr2 (94-185)||(30241412-30241503)
chr2 (199-279)||(18974605-18974685)
chr2 (166-229)||(12757720-12757783)
chr2 (199-274)||(40475383-40475458)
chr2 (98-192)||(13142606-13142700)
chr2 (208-274)||(40507739-40507805)
chr2 (94-279)||(9205067-9205252)
chr2 (92-269)||(17154175-17154353)
chr2 (176-279)||(7819311-7819414)
chr2 (104-279)||(29221230-29221405)
chr2 (104-279)||(29334529-29334704)
chr2 (153-219)||(10391686-10391752)
chr2 (92-192)||(18974680-18974779)
chr2 (151-191)||(40507694-40507734)
[»] chr1 (61 HSPs)
chr1 (102-270)||(14106221-14106386)
chr1 (92-279)||(31646327-31646514)
chr1 (92-281)||(4893321-4893510)
chr1 (92-281)||(29184977-29185166)
chr1 (92-281)||(33362924-33363113)
chr1 (91-279)||(39026633-39026821)
chr1 (92-279)||(48796429-48796616)
chr1 (92-280)||(48662549-48662736)
chr1 (92-279)||(8981597-8981774)
chr1 (91-284)||(29426341-29426521)
chr1 (94-282)||(42069148-42069336)
chr1 (91-280)||(19506274-19506463)
chr1 (94-279)||(28220860-28221045)
chr1 (91-248)||(47662198-47662355)
chr1 (122-280)||(40094568-40094726)
chr1 (92-279)||(20414860-20415047)
chr1 (98-280)||(25815361-25815543)
chr1 (92-280)||(2978310-2978498)
chr1 (91-279)||(35739039-35739227)
chr1 (104-286)||(30489551-30489733)
chr1 (98-279)||(9222135-9222316)
chr1 (98-279)||(13312625-13312806)
chr1 (94-279)||(48964404-48964589)
chr1 (106-274)||(2501470-2501638)
chr1 (91-251)||(48514352-48514512)
chr1 (92-279)||(19996704-19996891)
chr1 (104-279)||(35978550-35978724)
chr1 (94-287)||(29054636-29054829)
chr1 (92-279)||(2975273-2975460)
chr1 (94-279)||(2433153-2433339)
chr1 (104-258)||(4052406-4052560)
chr1 (198-269)||(48985044-48985115)
chr1 (94-279)||(22580097-22580282)
chr1 (92-185)||(25059087-25059180)
chr1 (91-228)||(50099756-50099893)
chr1 (94-279)||(44327960-44328140)
chr1 (92-192)||(610689-610789)
chr1 (92-281)||(35949629-35949806)
chr1 (92-214)||(424528-424650)
chr1 (92-270)||(7842468-7842645)
chr1 (92-228)||(9472891-9473027)
chr1 (104-259)||(945392-945547)
chr1 (92-182)||(32835539-32835629)
chr1 (121-259)||(38491331-38491469)
chr1 (166-279)||(12560673-12560785)
chr1 (121-214)||(27783472-27783565)
chr1 (170-281)||(32133389-32133501)
chr1 (104-192)||(33794442-33794530)
chr1 (166-270)||(34320850-34320954)
chr1 (94-185)||(30623029-30623120)
chr1 (94-233)||(43634670-43634808)
chr1 (129-192)||(28192547-28192610)
chr1 (92-182)||(973498-973588)
chr1 (124-214)||(31107709-31107799)
chr1 (166-279)||(16177146-16177259)
chr1 (92-156)||(3192183-3192247)
chr1 (92-156)||(3201001-3201065)
chr1 (92-156)||(3209838-3209902)
chr1 (125-228)||(46772564-46772667)
chr1 (166-270)||(21260837-21260941)
chr1 (91-139)||(32133501-32133549)
[»] chr3 (47 HSPs)
chr3 (92-279)||(45079238-45079425)
chr3 (91-279)||(5908119-5908307)
chr3 (97-279)||(19618573-19618755)
chr3 (92-279)||(42096775-42096962)
chr3 (91-285)||(49374675-49374869)
chr3 (91-279)||(10085292-10085480)
chr3 (91-279)||(10192212-10192400)
chr3 (104-279)||(27064080-27064255)
chr3 (94-282)||(19454670-19454858)
chr3 (92-279)||(30248087-30248273)
chr3 (104-279)||(32995122-32995297)
chr3 (92-279)||(35688190-35688377)
chr3 (92-279)||(41410290-41410477)
chr3 (92-280)||(48583617-48583804)
chr3 (93-279)||(23299554-23299740)
chr3 (98-280)||(44792681-44792863)
chr3 (94-279)||(50481098-50481283)
chr3 (98-282)||(24987445-24987629)
chr3 (121-279)||(43657157-43657314)
chr3 (94-280)||(49359849-49360035)
chr3 (92-279)||(8340041-8340216)
chr3 (125-270)||(26795319-26795465)
chr3 (92-259)||(19873001-19873168)
chr3 (94-224)||(6408517-6408647)
chr3 (112-281)||(25467372-25467541)
chr3 (91-259)||(35732144-35732312)
chr3 (91-259)||(38694845-38695013)
chr3 (94-279)||(39352354-39352534)
chr3 (91-279)||(5041085-5041273)
chr3 (98-229)||(41923907-41924038)
chr3 (92-279)||(48079962-48080137)
chr3 (128-280)||(2013123-2013273)
chr3 (92-185)||(50508904-50508997)
chr3 (104-251)||(9163042-9163187)
chr3 (94-259)||(13735661-13735827)
chr3 (92-270)||(40563836-40564018)
chr3 (94-279)||(46819048-46819233)
chr3 (96-275)||(6083579-6083758)
chr3 (92-270)||(33099543-33099721)
chr3 (173-253)||(20825355-20825435)
chr3 (99-219)||(51055407-51055527)
chr3 (95-280)||(12905502-12905687)
chr3 (91-142)||(7940356-7940407)
chr3 (121-216)||(27346532-27346627)
chr3 (207-267)||(39961403-39961463)
chr3 (92-133)||(11671771-11671812)
chr3 (92-220)||(2150711-2150839)
[»] chr8 (31 HSPs)
chr8 (92-269)||(221885-222063)
chr8 (92-269)||(691040-691218)
chr8 (92-269)||(735508-735686)
chr8 (92-269)||(859404-859582)
chr8 (92-280)||(20216099-20216287)
chr8 (92-280)||(20235697-20235885)
chr8 (112-279)||(7579950-7580117)
chr8 (92-269)||(19643542-19643719)
chr8 (92-270)||(38019950-38020128)
chr8 (94-280)||(1376077-1376263)
chr8 (92-280)||(24891446-24891635)
chr8 (94-270)||(3616895-3617071)
chr8 (98-270)||(24789414-24789586)
chr8 (153-279)||(39221636-39221762)
chr8 (92-280)||(2472309-2472497)
chr8 (92-251)||(25500067-25500226)
chr8 (127-282)||(37226836-37226991)
chr8 (91-228)||(2620988-2621125)
chr8 (92-193)||(6109601-6109702)
chr8 (127-224)||(15961735-15961832)
chr8 (105-279)||(28970727-28970901)
chr8 (92-192)||(25419247-25419347)
chr8 (104-185)||(1667243-1667324)
chr8 (92-185)||(26561256-26561349)
chr8 (208-281)||(38546827-38546900)
chr8 (94-270)||(7057507-7057683)
chr8 (121-192)||(38551558-38551629)
chr8 (168-270)||(34776834-34776936)
chr8 (166-228)||(43239126-43239188)
chr8 (92-279)||(30801140-30801327)
chr8 (104-191)||(15542116-15542202)
[»] chr7 (45 HSPs)
chr7 (92-274)||(1876071-1876253)
chr7 (92-281)||(17172247-17172436)
chr7 (92-280)||(28067299-28067487)
chr7 (92-280)||(44300611-44300799)
chr7 (104-279)||(36074164-36074339)
chr7 (91-269)||(26299062-26299240)
chr7 (122-279)||(9355220-9355377)
chr7 (94-295)||(40789561-40789762)
chr7 (104-259)||(33978744-33978899)
chr7 (98-280)||(46181111-46181293)
chr7 (92-282)||(48558712-48558902)
chr7 (98-279)||(16567466-16567647)
chr7 (98-279)||(16598015-16598196)
chr7 (94-279)||(19804937-19805122)
chr7 (104-268)||(38469959-38470123)
chr7 (94-279)||(10066289-10066474)
chr7 (121-269)||(9223551-9223699)
chr7 (94-270)||(27398488-27398664)
chr7 (92-279)||(40342344-40342531)
chr7 (106-240)||(34152399-34152533)
chr7 (106-240)||(34174591-34174725)
chr7 (92-190)||(36072593-36072691)
chr7 (92-270)||(5924098-5924264)
chr7 (121-280)||(9477557-9477716)
chr7 (94-279)||(5023222-5023405)
chr7 (95-276)||(2959849-2960018)
chr7 (94-279)||(31454797-31454982)
chr7 (92-193)||(43702442-43702543)
chr7 (160-285)||(25309609-25309734)
chr7 (121-270)||(39414486-39414635)
chr7 (94-191)||(43224305-43224402)
chr7 (112-270)||(45112120-45112260)
chr7 (92-185)||(30391542-30391634)
chr7 (207-279)||(36072522-36072594)
chr7 (92-270)||(11243932-11244110)
chr7 (121-192)||(46783062-46783133)
chr7 (133-259)||(16560793-16560919)
chr7 (133-259)||(16604743-16604869)
chr7 (121-279)||(33067525-33067683)
chr7 (208-269)||(12499697-12499758)
chr7 (92-276)||(3551561-3551745)
chr7 (125-228)||(31330996-31331100)
chr7 (92-215)||(42284468-42284591)
chr7 (94-270)||(3362863-3363040)
chr7 (92-148)||(30738662-30738718)
[»] chr4 (64 HSPs)
chr4 (92-279)||(11034598-11034785)
chr4 (92-282)||(29405894-29406084)
chr4 (92-279)||(53140513-53140700)
chr4 (92-281)||(52802286-52802476)
chr4 (94-279)||(2721256-2721441)
chr4 (94-280)||(1758003-1758189)
chr4 (92-270)||(45097473-45097651)
chr4 (91-228)||(22306823-22306960)
chr4 (91-270)||(28234193-28234371)
chr4 (98-285)||(52180805-52180992)
chr4 (94-280)||(22829651-22829825)
chr4 (94-270)||(12185690-12185866)
chr4 (94-270)||(12187682-12187858)
chr4 (92-279)||(3387237-3387424)
chr4 (98-279)||(32655549-32655730)
chr4 (91-285)||(31786316-31786504)
chr4 (98-279)||(42053295-42053476)
chr4 (91-269)||(39804183-39804360)
chr4 (94-280)||(42755242-42755428)
chr4 (98-279)||(29149043-29149224)
chr4 (91-259)||(8805946-8806113)
chr4 (94-280)||(21075731-21075917)
chr4 (94-279)||(14576694-14576879)
chr4 (94-228)||(52595498-52595632)
chr4 (94-214)||(2224980-2225100)
chr4 (280-352)||(18491615-18491686)
chr4 (92-270)||(7261934-7262101)
chr4 (94-228)||(652198-652332)
chr4 (91-270)||(26340251-26340446)
chr4 (92-270)||(46080629-46080807)
chr4 (94-279)||(29994222-29994407)
chr4 (114-279)||(41780559-41780724)
chr4 (92-280)||(34459652-34459840)
chr4 (93-272)||(9608879-9609056)
chr4 (124-274)||(24486478-24486629)
chr4 (92-219)||(33733340-33733466)
chr4 (94-236)||(33983082-33983224)
chr4 (91-185)||(56445183-56445277)
chr4 (98-191)||(44293024-44293117)
chr4 (104-268)||(51806964-51807127)
chr4 (92-274)||(27586605-27586787)
chr4 (92-192)||(22247849-22247949)
chr4 (135-259)||(50982012-50982136)
chr4 (200-279)||(21297390-21297469)
chr4 (121-228)||(23147367-23147474)
chr4 (92-268)||(31713656-31713820)
chr4 (145-259)||(52013730-52013844)
chr4 (95-259)||(21245761-21245926)
chr4 (94-183)||(41003318-41003407)
chr4 (122-259)||(38000519-38000651)
chr4 (121-280)||(54932778-54932937)
chr4 (92-197)||(8644252-8644357)
chr4 (94-142)||(3094990-3095038)
chr4 (94-282)||(25938264-25938452)
chr4 (144-279)||(8065867-8066001)
chr4 (126-235)||(2073667-2073776)
chr4 (166-259)||(39485230-39485323)
chr4 (166-214)||(3098011-3098059)
chr4 (92-195)||(1731072-1731175)
chr4 (98-177)||(54979173-54979252)
chr4 (168-222)||(55760251-55760305)
chr4 (208-281)||(22247772-22247845)
chr4 (94-203)||(22313378-22313487)
chr4 (168-228)||(31487220-31487280)
[»] chr6 (23 HSPs)
chr6 (94-279)||(6337133-6337318)
chr6 (92-281)||(24447148-24447337)
chr6 (92-281)||(1221737-1221926)
chr6 (91-280)||(9062168-9062358)
chr6 (94-279)||(20691614-20691799)
chr6 (121-279)||(6799478-6799636)
chr6 (94-279)||(1329587-1329772)
chr6 (112-280)||(6337979-6338147)
chr6 (98-279)||(33328488-33328669)
chr6 (98-279)||(33331500-33331681)
chr6 (94-281)||(31070694-31070881)
chr6 (98-279)||(13534221-13534403)
chr6 (121-262)||(29641505-29641646)
chr6 (92-184)||(6938039-6938128)
chr6 (92-222)||(9350745-9350875)
chr6 (121-228)||(31784025-31784132)
chr6 (94-182)||(28769875-28769963)
chr6 (121-214)||(31511683-31511776)
chr6 (104-227)||(3516207-3516330)
chr6 (174-233)||(34301396-34301455)
chr6 (92-182)||(10499164-10499254)
chr6 (209-270)||(10499086-10499147)
chr6 (198-270)||(6937965-6938037)
[»] chr5 (38 HSPs)
chr5 (92-279)||(15674007-15674193)
chr5 (115-280)||(33347126-33347291)
chr5 (92-281)||(41692495-41692684)
chr5 (92-279)||(19254515-19254702)
chr5 (92-281)||(34718811-34719000)
chr5 (91-279)||(29455684-29455872)
chr5 (112-279)||(4901988-4902155)
chr5 (94-280)||(14088161-14088346)
chr5 (92-280)||(35935204-35935386)
chr5 (94-280)||(41616476-41616662)
chr5 (92-281)||(639389-639578)
chr5 (92-269)||(19549253-19549430)
chr5 (94-270)||(14087566-14087741)
chr5 (91-279)||(32302296-32302470)
chr5 (92-268)||(38309679-38309856)
chr5 (104-279)||(16186661-16186836)
chr5 (121-279)||(15719238-15719396)
chr5 (92-270)||(6277840-6278020)
chr5 (98-279)||(14645209-14645389)
chr5 (124-264)||(10937329-10937469)
chr5 (94-280)||(7977923-7978109)
chr5 (104-259)||(30774719-30774875)
chr5 (94-282)||(36470480-36470667)
chr5 (121-280)||(6224889-6225048)
chr5 (92-270)||(31149722-31149901)
chr5 (91-184)||(35853510-35853603)
chr5 (94-202)||(1060918-1061026)
chr5 (92-264)||(22632272-22632444)
chr5 (92-214)||(4572227-4572348)
chr5 (92-174)||(24489100-24489182)
chr5 (92-261)||(41983159-41983328)
chr5 (168-259)||(15023418-15023509)
chr5 (168-261)||(6092746-6092839)
chr5 (168-280)||(20675000-20675112)
chr5 (233-280)||(35851983-35852030)
chr5 (166-274)||(25694748-25694855)
chr5 (134-191)||(25828448-25828505)
chr5 (166-270)||(30689-30793)
[»] scaffold0160 (1 HSPs)
scaffold0160 (92-279)||(26154-26341)
[»] scaffold0230 (1 HSPs)
scaffold0230 (92-281)||(26526-26715)
[»] scaffold0242 (2 HSPs)
scaffold0242 (121-270)||(13129-13278)
scaffold0242 (121-270)||(21964-22113)
[»] scaffold0024 (1 HSPs)
scaffold0024 (91-280)||(110032-110220)
[»] scaffold0005 (1 HSPs)
scaffold0005 (94-279)||(240496-240681)
[»] scaffold0312 (1 HSPs)
scaffold0312 (92-214)||(5899-6021)
[»] scaffold0164 (2 HSPs)
scaffold0164 (126-228)||(7158-7260)
scaffold0164 (126-228)||(15039-15141)
[»] scaffold0249 (1 HSPs)
scaffold0249 (92-228)||(19977-20113)
[»] scaffold0602 (1 HSPs)
scaffold0602 (92-197)||(4983-5088)
[»] scaffold0938 (1 HSPs)
scaffold0938 (104-263)||(369-529)
[»] scaffold0062 (2 HSPs)
scaffold0062 (104-263)||(23923-24083)
scaffold0062 (104-263)||(34091-34251)
[»] scaffold0011 (1 HSPs)
scaffold0011 (92-270)||(250060-250238)


Alignment Details
Target: chr2 (Bit Score: 108; Significance: 4e-54; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 104 - 279
Target Start/End: Original strand, 41935565 - 41935740
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    |||| |||||||||| |||||||||||| ||||||||||||||||  |||||||| ||||  |||||||||||||||||||| ||||||  | |||||||    
T  41935565 taaactgtgggtaatgggtgcgggtatgagcacttaggtgcccatagggtatgaggaaggacactaaagttgttgcccacgagggtacggacccgggtac 41935664  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
     |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  41935665 agatattttttacaaacgcgggtatggagatgggtactatagtaccctgcccattggatacccattgtcatcccta 41935740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 92 - 281
Target Start/End: Complemental strand, 4289716 - 4289527
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||||||| ||||||||  |||||| | ||||| | |||||||||||||||||| |||||    
T  4289716 tcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccatagggtatggggaagggcattaaagttgttgcccacgagggtac 4289617  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    | ||||||||||||| |||||||||||| | |||||| | ||| ||||||||||||||||  ||||||||||||||||| ||| ||||||    
T  4289616 gggctcgggtacggacattttttacaaatgagggtatggggatagatactatagtaccctatccattgggtacccattgccatccctaat 4289527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 92 - 280
Target Start/End: Complemental strand, 15234386 - 15234198
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||||||||||| ||||| | |||||||| ||| ||||||  ||||||||  ||||||||  |||||||||||||||||||||||||  ||||    
T  15234386 tcttttcatagataaagtgcgggtattgggtgcgggaatgagcacttttgtgcccatagggtatgaggtagggtactaaagttgttgcccacgagagtac 15234287  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    | ||||||||||||| |||||||||||||||| |||| |   ||| |||||||||||||| ||||||||||||||||| |||| |||||    
T  15234286 gggctcgggtacggacattttttacaaacgcgagtatgggattgggtactatagtaccctacccattgggtacccattttcatccctaa 15234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 91 - 279
Target Start/End: Complemental strand, 35048700 - 35048513
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||| ||| | ||||||| ||||||| |||||||||||||||||||| ||||||||  | |||| | ||||| |||||||||||||||||||| ||||    
T  35048700 atctttccatggctaaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccataggatatggggaagggcactaaagttgttgcccacgagggta 35048601  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || || ||||||||   ||||||||||||||||||||| | ||||||||||||||||||||  |||||||||| |||||| ||| ||||    
T  35048600 cgggcacgggtacgagcattttttacaaacgcgggtatggggatggatactatagtaccct-accattgggtatccattgccatcccta 35048513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 92 - 275
Target Start/End: Original strand, 29546124 - 29546307
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| || ||||||| ||||||||||||| |||||||||||||||  |||||| | ||||| | | |||||||||||||||| | |||    
T  29546124 tcttttcatagttaaaatgcgggtaatgggtgcgggtatggacacttaggtgcccatagggtatggggaagggcaatgaagttgttgcccacgaggatac 29546223  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcatt 275  Q
    | |  ||||||||| ||||||||||||||| |||||| | ||||| ||||||||||||||  ||||||||||||||||| ||||    
T  29546224 gggtccgggtacgggtattttttacaaacgtgggtatggggatgggtactatagtaccctatccattgggtacccattgccatt 29546307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 98 - 279
Target Start/End: Complemental strand, 25424824 - 25424643
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| || || || |||||  |||||| | ||||| |||||||||||||||||||| |||||| || |    
T  25424824 catagttaaagtgcgggtaatgggtgcgggtatgggtacctaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgggcac 25424725  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||||||||||||| ||| |||||||| | || ||| | | ||||||||| |||||||||||||||||| ||| ||||    
T  25424724 gggtacggatattttttataaatgcgggtatggggacggacattgtagtaccctacccattgggtacccattgccatcccta 25424643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 98 - 279
Target Start/End: Original strand, 33867580 - 33867761
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| || || || |||||  |||||| | ||||| |||||||||||||||||||| |||||| || |    
T  33867580 catagttaaagtgcgggtaatgggtgcgggtatgggtacctaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgggcac 33867679  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||||||||||||| ||| |||||||| | || ||| | | ||||||||| |||||||||||||||||| ||| ||||    
T  33867680 gggtacggatattttttataaatgcgggtatggggacggacattgtagtaccctacccattgggtacccattgccatcccta 33867761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 112 - 259
Target Start/End: Original strand, 8027500 - 8027648
Alignment:
Q  112 gggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattt 211  Q
    ||||||| |||||||||||||| ||||| ||||||||  |||||| ||||||| ||||||||||||| ||||||  ||||| || |||||||||| ||||    
T  8027500 gggtaatgggtgcgggtatgggtacttaagtgcccatagggtatgggaaagggcactaaagttgttgtccacgagtgtacgggcacgggtacggacattt 8027599  T
Q  212 tttac-aaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    ||||| |||||||||||| | ||||||||||||||||| || |||||||    
T  8027600 tttacaaaacgcgggtatggggatggatactatagtacactacccattg 8027648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 94 - 270
Target Start/End: Original strand, 31440666 - 31440842
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||| | |||  ||||||   ||||| ||||||||| |||||||||| ||||||     
T  31440666 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggtacacatagggtatggagaaggggactaaagttattgcccacgagggtacgg 31440765  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    || ||||||||| ||||||||| ||| |||||||| | || ||  | | ||||||||| ||||||||||||||||||    
T  31440766 gcacgggtacgggtattttttataaatgcgggtattgggacgggcattgtagtaccctacccattgggtacccattg 31440842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 667999 - 668186
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| || |||| ||||||||||||||||||||||| |||||  | |||| | ||||| |||||||||||||||||||| | |||    
T  667999 tcttttcatagttaaagtgcggataatgggtgcgggtatgggcacttaggtacccataggatatggggaagggcactaaagttgttgcccacgaggatac 668098  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | || ||||||||  || |||||||||| | ||||||   |||||  | | ||||||||| |||||||||||||||||| ||| ||||    
T  668099 gggcacgggtacgagtaatttttacaaatgtgggtatgaggatgggcattgtagtaccctacccattgggtacccattgccatcccta 668186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 279
Target Start/End: Complemental strand, 2656862 - 2656687
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    |||||||  ||||||  ||| |||||||| |||||| || |||||  |||||| | ||||  |||||||||||||||||||| |||| | ||||| |||     
T  2656862 taaagtgcaggtaatgtgtgtgggtatggacacttaagtacccatagggtatggggaaggacactaaagttgttgcccacgagggtatgggctcgagtat 2656763  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||  |||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||| ||| ||||    
T  2656762 gggcattttttacaaacgtgggtatagagatgggtactatagtaccctgcccgttgggtatccattgacatcccta 2656687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 3329265 - 3329090
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||||||||||| ||||||||||| | ||||||||| |||||   ||||| | || || |||||||||||||||||||| ||||||     
T  3329265 ttttcatagttaaagtgtgggtaatgggtgcgggtatagacacttaggtacccatagagtatggggaaagggactaaagttgttgcccacgagggtacgg 3329166  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    ||  |||||||| ||||||||| ||| |||||||| | || ||  ||| ||||||||| |||||||| ||||||||    
T  3329165 gcatgggtacgggtattttttataaatgcgggtatggggacgggcactgtagtaccctacccattggatacccatt 3329090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 106 - 240
Target Start/End: Complemental strand, 15162049 - 15161915
Alignment:
Q  106 aagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacgg 205  Q
    ||||||||||||| |||||||||||||||||||| ||||||||  |||||  | ||||| |||||||||||||||||||| || ||  || |||||||||    
T  15162049 aagtgtgggtaatgggtgcgggtatgggcacttaagtgcccatagggtatagggaagggcactaaagttgttgcccacgagggaacaggcacgggtacgg 15161950  T
Q  206 atattttttacaaacgcgggtatagagatggatac 240  Q
    | ||||||||||||||||| ||| | |||||||||    
T  15161949 acattttttacaaacgcggatatggggatggatac 15161915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 279
Target Start/End: Original strand, 32422775 - 32422956
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| ||||| || |||||  |||||| | ||||| |||||||||||||||||||| |||||| || |    
T  32422775 catagttaaagtgcgggtaatgggtgcgggtatgggtacttaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgggcac 32422874  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||||||| |||||||||| ||| |||||||| | || ||  | | ||||||| |  ||||||||||||||||| ||| ||||    
T  32422875 gggtacgaatattttttataaatgcgggtatggggacgggcattgtagtaccgtatccattgggtacccattgccatcccta 32422956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 121 - 280
Target Start/End: Original strand, 44070462 - 44070622
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggata-ttttttacaaa 219  Q
    |||||||||||||||||||||| |||||  |||||| ||||||| |||||||||||||||||||| |||||| || ||||||||| || ||||||| |||    
T  44070462 gtgcgggtatgggcacttaggtacccatagggtatgggaaaggggactaaagttgttgcccacgagggtacgggcacgggtacgggtatttttttataaa 44070561  T
Q  220 cgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
     |||| |||  ||| ||  ||| ||||||||| ||||||| |||||||||| ||| |||||    
T  44070562 tgcggatatgaagacgggcactgtagtaccctacccattgagtacccattgccatccctaa 44070622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 92 - 279
Target Start/End: Complemental strand, 20937121 - 20936936
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||  |||||||||||||||  |||||||||||| ||||||||| |||| |||||||| | ||||  |||||||||||| ||||||| |||||    
T  20937121 tcttttcataattaaagtgtgggtaataagtgcgggtatggacacttaggtaccca-taggtatggggaaggacactaaagttgtt-cccacgagggtac 20937024  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
     | | ||||||||| |||||||||||||  |||||||   |||||  ||| ||||||||| ||||| |||| ||||||| ||| ||||    
T  20937023 aaacacgggtacgggtattttttacaaatacgggtatgaggatgggcactgtagtaccctacccatagggtgcccattgccatcccta 20936936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 122 - 279
Target Start/End: Complemental strand, 11788669 - 11788513
Alignment:
Q  122 tgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacg 221  Q
    |||||||||||||||||| | ||||||  ||| || ||| ||| |||||| ||||||||||||| |||||| || |||||| |   | ||||||||||||    
T  11788669 tgcgggtatgggcacttaagggcccatagggtctgggaa-gggcactaaaattgttgcccacgagggtacgggcacgggtatgcgcactttttacaaacg 11788571  T
Q  222 cgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||||||| | ||||||||||||| |||||| ||||||| |||||||||| ||| ||||    
T  11788570 cgggtatggggatggatactataataccctacccattgagtacccattgccatcccta 11788513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 279
Target Start/End: Complemental strand, 38620462 - 38620281
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||  ||||| || |||||  |||||| | ||||| ||||||||||||||||| || |||| | || |    
T  38620462 catagttaaagtgcgggtaatgggtgcgggtatggatacttaagtacccatagggtatggggaaggggactaaagttgttgcccatgagggtatgggcac 38620363  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||| ||||||||| ||| || ||||| | |||||  | | ||||||||| ||||||| |||||||||| ||| ||||    
T  38620362 gggtacgggtattttttataaatgcaggtatggggatgggcattgtagtaccctacccattgagtacccattgccatcccta 38620281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 98 - 281
Target Start/End: Complemental strand, 4481126 - 4480949
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| ||||||||||||| |||||| || |||||  |||||| | ||||| |||||||||||||||||||| ||||      |    
T  4481126 catagttaaagtgcgggtaatgggtgcgggtatggacacttaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggta------c 4481033  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    |||||||| ||||||||| ||| |||||||| | || ||  | | ||||||| | |||||||||||||||||| ||| ||||||    
T  4481032 gggtacgggtattttttataaatgcgggtatggggacgggcattgtagtaccttacccattgggtacccattgccatccctaat 4480949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 25667463 - 25667355
Alignment:
Q  172 gttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgt 271  Q
    ||||||| |||| | |||| |||||| |||||||||||||||||||||||||||||  | || || || ||||||||||| |||||||| ||||||||||    
T  25667463 gttgttgtccacaagggtatgagctcaggtacggatattttttacaaacgcgggtacggggaagggtattatagtaccctacccattggatacccattgt 25667364  T
Q  272 cattcctaa 280  Q
    |||||||||    
T  25667363 cattcctaa 25667355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 4592222 - 4592344
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| ||||||| |||||| | |||| ||||||||| ||||| ||||| ||| ||||| ||||||||||||||| |||| |||||    
T  4592222 tcttttcatagttaaagtgcgggtaatgggtgcgagcatggacacttaggtacccataaggtacgaggaagggcactaaagttgttgccgacgagggtac 4592321  T
Q  192 gagctcgggtacggatatttttt 214  Q
    |||| ||||| ||  ||||||||    
T  4592322 gagcacgggtgcgtgtatttttt 4592344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 94 - 279
Target Start/End: Complemental strand, 23231805 - 23231626
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||| || |||||  |||||| | ||||| |||| ||||||||||||||| ||||       
T  23231805 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaagtacccatagggtatggggaaggggactacagttgttgcccacgagggta--- 23231709  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
       ||||||||| ||||||||| |||   |||||| | || ||  | | ||||||||| |||||||||||||||||| ||| ||||    
T  23231708 ---cgggtacgggtattttttataaatttgggtatggggacgggcattgtagtaccctacccattgggtacccattgccatcccta 23231626  T

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Target: chr2; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 151 - 279
Target Start/End: Complemental strand, 42969049 - 42968915
Alignment:
Q  151 ggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggata-------ttttttacaaacgcgggtatagagatggatactat 243  Q
    |||||| | ||||| |||||||||||||||||||| |||||| || ||||||||| ||       |||||||||||| ||||||| ||||||||||||||    
T  42969049 ggtatggggaagggcactaaagttgttgcccacgagggtacgggcacgggtacgggtacatgcatttttttacaaacacgggtat-gagatggatactat 42968951  T
Q  244 agtaccctgcccattgggtacccattgtcattccta 279  Q
    ||||||||  ||||||||||||||||| ||| ||||    
T  42968950 agtaccctatccattgggtacccattgccatcccta 42968915  T

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Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 228
Target Start/End: Original strand, 39767171 - 39767294
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||||||||||| ||| | |||||| ||||||||||||| ||  |||||||| ||| |||||||||||||| || || |  ||||||||||||||||    
T  39767171 taaagtgtgggtaatgggtacaggtatgagcacttaggtgcctatagggtatgaggaagagtactaaagttgtttcctacaagagtacgagctcgggtac 39767270  T
Q  204 ggatattttttacaaacgcgggtat 228  Q
     || | |||||||||||||||||||    
T  39767271 -gagaatttttacaaacgcgggtat 39767294  T

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Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 44928791 - 44928902
Alignment:
Q  168 taaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtaccca 267  Q
    |||| ||||||||||||| |||| | | ||||||||||| ||||||||||||||||||||  | || ||| | |||||||||||||| |||||| |||||    
T  44928791 taaaattgttgcccacgagggtatgggttcgggtacggacattttttacaaacgcgggtacggggaaggacattatagtaccctgcctattggggaccca 44928890  T
Q  268 ttgtcattccta 279  Q
    ||||||| ||||    
T  44928891 ttgtcatcccta 44928902  T

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Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 268
Target Start/End: Original strand, 12345599 - 12345698
Alignment:
Q  166 actaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacc 265  Q
    ||||||||||||||||||||| ||||| || ||||||||   ||||   ||||||| |||||| |||||||||||||||||||||| |||||| ||||||    
T  12345599 actaaagttgttgcccacgaaagtacgggcacgggtacgagcattt---acaaacgtgggtatggagatggatactatagtaccctacccattaggtacc 12345695  T

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Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 8753847 - 8753763
Alignment:
Q  166 actaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccc 250  Q
    ||||| |||||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||  ||||||  ||||||| |||||    
T  8753847 actaacgttgttgcccacgagggtacgagctcaggtacagatattttttagaaacgcgggtacggagatgtgtactataataccc 8753763  T

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Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 228
Target Start/End: Complemental strand, 29155392 - 29155256
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| ||||||| |||||||||| |||||||| ||| |||||  |||||| | ||| ||| ||||||||||| |||| ||||| |    
T  29155392 tcttttcatagttaaagtgcgggtaatgggtgcgggtacgggcacttgggtacccatagggtatggggaagagtattaaagttgttgtccacaaaggtgc 29155293  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtat 228  Q
    |  |  |||||||  ||| ||||||||| ||||||||    
T  29155292 ggacatgggtacgagtatattttacaaatgcgggtat 29155256  T

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Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 16711371 - 16711559
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||  ||||| | || |||| ||| |||||||||||||||| |||| |||  |||||||| ||||  | |||| |||||| |||||| ||||     
T  16711371 tcttttcatatttaaagagcggataatgggtacgggtatgggcacttaagtgctcatagggtatgaggaaggacattaaaattgttgtccacgagggtat 16711470  T
Q  192 gagctcgggtacggata-ttttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | | |||||||||  || |||||||||||||||||||  | || ||  ||| ||||||||| |||||  |||| |||||||||| ||||    
T  16711471 gggttcgggtacgagtatttttttacaaacgcgggtagggggaagggcactgtagtaccctacccataaggtatccattgtcatcccta 16711559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 30241503 - 30241412
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacga 185  Q
    ||||||||| ||||||| ||||||| |||||| |||||||||||||||| |||||  ||||||   ||||  ||||||||||||||| ||||    
T  30241503 ttttcatagttaaagtgcgggtaatgggtgcgagtatgggcacttaggtacccatagggtatggagaaggagactaaagttgttgccgacga 30241412  T

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Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 279
Target Start/End: Complemental strand, 18974685 - 18974605
Alignment:
Q  199 ggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||||||| |||||||| ||||||||||||| | ||||| |||||||||||||| ||| ||  |||||||||| ||| ||||    
T  18974685 ggtacgggtattttttgcaaacgcgggtatggggatgggtactatagtaccctacccgttatgtacccattgccatcccta 18974605  T

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Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 12757783 - 12757720
Alignment:
Q  166 actaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtata 229  Q
    |||||| |||||| ||| |||| ||| || | ||||||||||||||||||||||||||||||||    
T  12757783 actaaaattgttgtccatgaagatacaagtttgggtacggatattttttacaaacgcgggtata 12757720  T

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Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 274
Target Start/End: Original strand, 40475383 - 40475458
Alignment:
Q  199 ggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcat 274  Q
    ||||| || ||||||||||||||||||||| | || || ||||||||||||||  ||||| ||||||| |||||||    
T  40475383 ggtacagacattttttacaaacgcgggtatggggaagggtactatagtaccctatccattaggtaccccttgtcat 40475458  T

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Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 13142606 - 13142700
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacg 192  Q
    ||||| ||||||| ||||||| | |||||||||||| ||||| || | |||  |||||| | ||||| ||||||||||||||||| || ||||||    
T  13142606 catagttaaagtgcgggtaatggatgcgggtatgggtacttaagtactcatagggtatggggaaggggactaaagttgttgcccaagagggtacg 13142700  T

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Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 40507739 - 40507805
Alignment:
Q  208 attttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcat 274  Q
    ||||||||||||||||||||| | || || ||||||||||||||  ||||| ||||| |||||||||    
T  40507739 attttttacaaacgcgggtatggggaagggtactatagtaccctatccattaggtactcattgtcat 40507805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 279
Target Start/End: Complemental strand, 9205252 - 9205067
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| |||| || || |||| | ||||||||||||||||||||| | |||  |||||| | ||||| || |||||| || ||||||| | ||||     
T  9205252 ttttcatagttaaaatgcggataatggatgcgggtatgggcacttaggtactcatagggtatggggaaggggaccaaagttattacccacgaggatacgg 9205153  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
     | |||||||   ||||||||| ||| |||| ||| |||| ||  |||  |||||||| || |||||| |||||||| ||| ||||    
T  9205152 acacgggtacaagtattttttataaatgcggttatggagacgggcactgcagtaccctacctattgggcacccattgccatcccta 9205067  T

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Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 269
Target Start/End: Original strand, 17154175 - 17154353
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| ||  | ||||||||||||||||||||| | ||||  ||||  |||||| | ||||  ||||||||||||||| |||| |||||    
T  17154175 tcttttcatagttaaaatgcagataattggtgcgggtatgggcattaaggt-accatagggtatggggaaggacactaaagttgttgcctacgagggtac 17154273  T
Q  192 gagctcgggtac--ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    |  ||||| |||  | || ||||||||||||||  |||| | || ||  ||||||||||||  |||||  ||||||||||    
T  17154274 ggactcggatacaagtattttttttacaaacgcatgtatggggaagggcactatagtacccaacccatatggtacccatt 17154353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 7819414 - 7819311
Alignment:
Q  176 ttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcatt 275  Q
    |||||||||| |||| ||||||||||| |   |||||||  |||||||||||| | ||||   ||||| |||||||||||| |||||| |||||| |||     
T  7819414 ttgcccacgagggtatgagctcgggtatgagaatttttttaaaacgcgggtatggggatgagcactatggtaccctgcccaatgggtatccattgccatc 7819315  T
Q  276 ccta 279  Q
    ||||    
T  7819314 ccta 7819311  T

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Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 279
Target Start/End: Original strand, 29221230 - 29221405
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| ||||||| || ||| ||| ||||| |||| |||||||  || ||| | | ||| | |||| ||||||||||||  |||| | | ||||||||    
T  29221230 taaagtgcgggtaatgggcgcgagtacgggcatttagatgcccatagggcatggggacgggcagtaaaattgttgcccacgggggtatgggttcgggtac 29221329  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||  |||||||||||| |||||||| |  | ||  | |||||||||||| ||||||||  ||||||| ||| ||||    
T  29221330 gggcattttttacaaatgcgggtatgggaacgggcattatagtaccctgtccattgggggcccattgccatcccta 29221405  T

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Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 279
Target Start/End: Original strand, 29334529 - 29334704
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| ||||||| || ||| ||| ||||| |||| |||||||  || ||| | | ||| | |||| ||||||||||||  |||| | | ||||||||    
T  29334529 taaagtgcgggtaatgggcgcgagtacgggcatttagatgcccatagggcatggggacgggcagtaaaattgttgcccacgggggtatgggttcgggtac 29334628  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||  |||||||||||| |||||||| |  | ||  | |||||||||||| ||||||||  ||||||| ||| ||||    
T  29334629 gggcattttttacaaatgcgggtatgggaacgggcattatagtaccctgtccattgggggcccattgccatcccta 29334704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 10391686 - 10391752
Alignment:
Q  153 tatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaa 219  Q
    |||||||||||  |||||||||||||||| ||||| |||  ||||| |||| || ||||||||||||    
T  10391686 tatgagaaaggacactaaagttgttgcccccgaagatacaggctcgagtacagacattttttacaaa 10391752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 18974779 - 18974680
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||  |||| || || |||| ||||||| ||||||||| || ||||||||  |||||| | |||   |||||| |||||||||||||||||||    
T  18974779 tcttttcataattaaaatgcggataatgggtgcggatatgggcacctaagtgcccatagggtatggggaagac-actaaaattgttgcccacgaaggtac 18974681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 40507694 - 40507734
Alignment:
Q  151 ggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||||| | |||||||||| |||||||||||||    
T  40507694 ggtatgagaaagggcattaaagttgttacccacgaaggtac 40507734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 270
Target Start/End: Complemental strand, 14106386 - 14106221
Alignment:
Q  102 gataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggt 201  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||    |||||||| |||||||||||||||||||||||||| | ||| |||||||||    
T  14106386 gataaagtgcggggaatgggtgcgggtatgggcacttaggtgcccg---ggtatgaggaagggtactaaagttgttgcccacgaggatacaagctcgggt 14106290  T
Q  202 acggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||    
T  14106289 acggacattttttacaaacgtgggtatagggatggatactatagtaccctgcccattgggtaccaattg 14106221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 31646327 - 31646514
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| || ||||||  |||||||||||||||||||||||||||||  |||||| | ||||| |||||||||||||||||||| |||||    
T  31646327 tcttttcatagttaaaatgcgggtaacgggtgcgggtatgggcacttaggtgcccatagggtatggggaagggcactaaagttgttgcccacgagggtac 31646426  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | |  ||||||||| |||||||||||||||||||||| ||||||| |||||||||||||| ||  |||||||||||||| ||| ||||    
T  31646427 gggtccgggtacgggtattttttacaaacgcgggtatggagatgggtactatagtaccctacctgttgggtacccattgccatcccta 31646514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 92 - 281
Target Start/End: Original strand, 4893321 - 4893510
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||||||| ||||||||  |||||| | ||||| | |||||||||||||||||| |||||    
T  4893321 tcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccatagggtatggggaagggcattaaagttgttgcccacgagggtac 4893420  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    | ||||||||||||| |||||||||||| | |||||| | ||||||||||||||||||||  ||||||||||||||||| ||| ||||||    
T  4893421 gggctcgggtacggacattttttacaaatgagggtatggggatggatactatagtaccctatccattgggtacccattgccatccctaat 4893510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 92 - 281
Target Start/End: Complemental strand, 29185166 - 29184977
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||||||| ||||||||  |||||| | ||||| | |||||||||||||||||| |||||    
T  29185166 tcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccatagggtatggggaagggcattaaagttgttgcccacgagggtac 29185067  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    | ||||||||||||| |||||||||||| | |||||| | ||||||||||||||||||||  ||||||||||||||||| ||| ||||||    
T  29185066 gggctcgggtacggacattttttacaaatgagggtatggggatggatactatagtaccctatccattgggtacccattgccatccctaat 29184977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 92 - 281
Target Start/End: Original strand, 33362924 - 33363113
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||||||| ||||||||  |||||| | ||||| | |||||||||||||||||| |||||    
T  33362924 tcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccatagggtatggggaagggcattaaagttgttgcccacgagggtac 33363023  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    | ||||||||||| | |||||||||||| | |||||| | ||||||||||||||||||||  ||||||||||||||||| ||| ||||||    
T  33363024 gggctcgggtacgaacattttttacaaatgagggtatggggatggatactatagtaccctatccattgggtacccattgccatccctaat 33363113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 91 - 279
Target Start/End: Complemental strand, 39026821 - 39026633
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||| ||| | ||||||| ||||||| |||||||||||||||||||| ||||||||  |||||| | ||||| ||||||||||||||||||||  |||    
T  39026821 atctttccatggctaaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccatagggtatggggaagggcactaaagttgttgcccacgagagta 39026722  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||  |||||||||||  |||||||||||||| |||||| | ||||||||||||||||||||  ||||||||||||||||| ||| ||||    
T  39026721 cggactcgggtacgggcattttttacaaacgtgggtatggcgatggatactatagtaccctatccattgggtacccattgccatcccta 39026633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 92 - 279
Target Start/End: Complemental strand, 48796616 - 48796429
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||| || |||| || ||||||| ||||||||||||||||||||||||||||   |||||  | ||||| ||||||||| |||||||||| ||||     
T  48796616 tcttttcagagttaaactgcgggtaatgggtgcgggtatgggcacttaggtgcccaaagggtatagggaagggcactaaagttattgcccacgagggtat 48796517  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | || ||| ||||| |||||||||||||||||||||| |  |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  48796516 gggcccggatacgggtattttttacaaacgcgggtatgggaatgggtactatagtaccctgcccattgggtacccattgtcatcccta 48796429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 92 - 280
Target Start/End: Complemental strand, 48662736 - 48662549
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatg-agaaagggtactaaagttgttgcccacgaaggta 190  Q
    ||||||||||  |||| || ||||||| ||||||||||||  |||||||||||||||   ||||| |||||||  |||||||||||||||||||| ||||    
T  48662736 tcttttcataattaaaatgcgggtaatgggtgcgggtatgaacacttaggtgcccatagagtatggagaaaggc-actaaagttgttgcccacgagggta 48662638  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    |||| ||||||||||||||||||||||||||| ||||| || |||| |||||||||||||| |||||||||||||||||| ||| |||||    
T  48662637 cgag-tcgggtacggatattttttacaaacgcaggtatggaaatgggtactatagtaccctacccattgggtacccattgccatccctaa 48662549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 8981597 - 8981774
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||| ||||          || || ||||||| |||||||||||||||||||| |||||    
T  8981597 tcttttcatagttaaagtgtaggtaatgggtgcgggtatgggcacatagg----------gtgtgggaaagggcactaaagttgttgcccacgagggtac 8981686  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | ||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  8981687 gggctcgagtacggatattttttacaaacgcgggtatgggaatggatactatagtaccctacccattggatacccattgtcatcccta 8981774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 91 - 284
Target Start/End: Original strand, 29426341 - 29426521
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    ||||||||| || |||| |||||||||| |||||||||||||||||||||||||||||  |||||| | ||||| ||||||||||||||||||||         
T  29426341 atcttttcagagttaaactgtgggtaatgggtgcgggtatgggcacttaggtgcccatatggtatggggaagggcactaaagttgttgcccacga----- 29426435  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaattgt 284  Q
           |||||||| |||||||||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  29426436 -------gggtacgggtattttttacaaacgcggatat-gggatgggtactatagtaccctgcccattgggtacccattgtcatccctacttgt 29426521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 94 - 282
Target Start/End: Original strand, 42069148 - 42069336
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||| | |||||  |||||| | ||||| |||||||||||||||||||| ||||||     
T  42069148 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttagatacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgg 42069247  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaatt 282  Q
    || ||||||||| ||||||||| ||| |||||||| | || ||  ||| ||||||||| ||||||||| |||||||| ||| |||||||    
T  42069248 gcacgggtacgggtattttttataaatgcgggtatggggacgggcactgtagtaccctacccattgggcacccattgccatccctaatt 42069336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 91 - 280
Target Start/End: Complemental strand, 19506463 - 19506274
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||| | |||||  |||||| | ||||| |||||||||||||||||||| ||||    
T  19506463 atcttttcatagttaaagtgtgggtaatgggtgcgggtatgggcacttagatacccatagggtatggggaagggcactaaagttgttgcccacgagggta 19506364  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    ||  | || |||||| || |||||| |||  ||||||| | |||||| | ||||||||||| |||||||| ||||||||| ||| |||||    
T  19506363 cggacacgagtacgggtaatttttaaaaattcgggtatggggatggacattatagtaccctacccattggatacccattgccatccctaa 19506274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 94 - 279
Target Start/End: Complemental strand, 28221045 - 28220860
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||| | |||||  |||||| ||||||| |||||||||||||||||||| ||||||     
T  28221045 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttagatacccatagggtatgggaaagggcactaaagttgttgcccacgagggtacgg 28220946  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || ||| ||||| || |||||| ||| |||||||| | |||||  | | ||||||||| |||||||||||||||||| ||| ||||    
T  28220945 gcacggatacgggtaatttttaaaaatgcgggtatggggatgggcattgtagtaccctacccattgggtacccattgccatcccta 28220860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 91 - 248
Target Start/End: Complemental strand, 47662355 - 47662198
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||| | ||||||| ||||||| |||||||||||||||||||| ||||||||  |||||| | ||||| |||||||||||||||||||| ||||    
T  47662355 atcttttcatggctaaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccatagggtatggggaagggcactaaagttgttgcccacgagggta 47662256  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtac 248  Q
    || || ||||||||   |||||||||||||| |||||| | |||||||||||||||||    
T  47662255 cgggcacgggtacgagcattttttacaaacgtgggtatggggatggatactatagtac 47662198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 122 - 280
Target Start/End: Original strand, 40094568 - 40094726
Alignment:
Q  122 tgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacg 221  Q
    |||||||||||||||||||||||||||  |||||| | ||||| |||||||||||||||||||| | |||  |  || ||||| ||||||||||||||||    
T  40094568 tgcgggtatgggcacttaggtgcccatagggtatggggaagggcactaaagttgttgcccacgaggatacaggtccgtgtacgaatattttttacaaacg 40094667  T
Q  222 cgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    ||||||| | |||||||||||| ||||||| |||||||| ||||||||| ||| |||||    
T  40094668 cgggtatggggatggatactatggtaccctacccattggatacccattgccatccctaa 40094726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 279
Target Start/End: Complemental strand, 20415047 - 20414860
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| ||||||||||||| |||||| ||||||||  |||| | | ||||| | |||||||||||||||||| |||||    
T  20415047 tcttttcatagagaaagtgcgggtaatgggtgcgggtatggccacttaagtgcccatagggtacggggaagggcagtaaagttgttgcccacgagggtac 20414948  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | |||||| |||||  |||||||||||| | |||||| | ||||| || |||||||||||  ||||||| || ||||| |||| ||||    
T  20414947 gggctcggatacgggcattttttacaaatgagggtatggggatgggtattatagtaccctatccattggatatccattatcatcccta 20414860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 98 - 280
Target Start/End: Original strand, 25815361 - 25815543
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| ||||| || |||||  |||||| | ||||| || ||||||||||||||||| |||| | || |    
T  25815361 catagttaaagtgcgggtaatgggtgcgggtatgggtacttaagtacccatagggtatggggaaggggaccaaagttgttgcccacgagggtatgggcac 25815460  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    |||||||||||||||||| ||| |||||||| | || ||  | | ||||||||| |||||||||||||||||| ||| |||||    
T  25815461 gggtacggatattttttataaatgcgggtatggggacgggcattgtagtaccctacccattgggtacccattgccatccctaa 25815543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 92 - 280
Target Start/End: Complemental strand, 2978498 - 2978310
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| |||||||  |||||||||||||||||||| | |||||  |||||| | ||||| |||||||||||||||||| | |||||    
T  2978498 tcttttcatagttaaagtgggggtaatgtgtgcgggtatgggcacttagatacccatagggtatggggaagggcactaaagttgttgcccacaagggtac 2978399  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
       | ||||||||| || |||||| ||| |||||||| | |||||  | | ||||||||| |||||||||||||||||| ||| |||||    
T  2978398 agacacgggtacgggtaatttttaaaaatgcgggtatggggatgggcattgtagtaccctacccattgggtacccattgccatccctaa 2978310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 91 - 279
Target Start/End: Original strand, 35739039 - 35739227
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||| ||| | ||||||| |||| || ||||||| |||||||||||| ||||||||  ||| || | ||||| |||||| ||||||||||| | ||||    
T  35739039 atctttccatggctaaagtgcgggtgatgggtgcggatatgggcacttaagtgcccatagggtctggggaagggcactaaaattgttgcccacaagggta 35739138  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || || |||||| ||  |||||||||||||||||||||   ||||||||||||| |||||| ||||||| |||||||||| ||| ||||    
T  35739139 cgggcacgggtatgggcattttttacaaacgcgggtatgtggatggatactataataccctacccattgagtacccattgccatcccta 35739227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 104 - 286
Target Start/End: Complemental strand, 30489733 - 30489551
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| ||||||| ||| ||||||| |||||||||||| ||||  | |||| | ||||| ||||||||||||  |||||| |||||| |||| |||||    
T  30489733 taaagtgcgggtaatgggtacgggtataggcacttaggtgtccataggatatggggaagggcactaaagttgttatccacgagggtacgggctcaggtac 30489634  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaattgtat 286  Q
        ||||||||||||||||||||| | || |  |||||||||||||| |||||||| ||||||||| ||| |||||||||||    
T  30489633 atgcattttttacaaacgcgggtatggggaagagtactatagtaccctacccattggctacccattgccatccctaattgtat 30489551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 279
Target Start/End: Complemental strand, 9222316 - 9222135
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||| ||||||||| ||||| || |||||  |||||| | ||||| |||||||||||||||||||| ||||||| | |    
T  9222316 catagttaaagtgcgggtaatgggtgtgggtatgggtacttaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgaacac 9222217  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||||||||||||  ||| |||||||| | || ||  | | ||||||||| |||||||| ||||||||| ||| ||||    
T  9222216 gggtacggatattttttgtaaatgcgggtatggggacgggcattgtagtaccctacccattggatacccattgccatcccta 9222135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 279
Target Start/End: Complemental strand, 13312806 - 13312625
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| ||||| || |||||  |||||| | ||||| |||||||||||||| ||||| |||||| || |    
T  13312806 catagttaaagtgcgggtaatgggtgcgggtatgggtacttaagtacccatagggtatggggaaggggactaaagttgttgctcacgagggtacgggcac 13312707  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || ||||| ||||||||| ||| |||||||| | || ||  | | ||||||||| |||||||||||||||||| ||| ||||    
T  13312706 ggatacgggtattttttataaatgcgggtatggggacgggcattgtagtaccctacccattgggtacccattgccatcccta 13312625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 94 - 279
Target Start/End: Original strand, 48964404 - 48964589
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||| |||| |||||   ||||| | ||||| |||||||||||||||||||| | ||||     
T  48964404 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcactgaggtacccatagagtatggggaaggggactaaagttgttgcccacgaggatacgg 48964503  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||  ||| |||| ||||||||| ||| |||||||| | ||  |  ||| ||||||||| |||||||||||||||||| ||| ||||    
T  48964504 gcaagggcacgggtattttttataaatgcgggtatggggacaggcactgtagtaccctacccattgggtacccattgccatcccta 48964589  T

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Target: chr1; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 274
Target Start/End: Complemental strand, 2501638 - 2501470
Alignment:
Q  106 aagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacgg 205  Q
    ||||||||||||| ||||||||||||||| || |||||||||| ||| ||| | ||||  |||||||||||||||| |||  ||| | | |||||||||     
T  2501638 aagtgtgggtaatgggtgcgggtatgggcgctaaggtgcccataagggatggggaaggacactaaagttgttgcccgcgagagtatgggatcgggtacga 2501539  T
Q  206 atattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcat 274  Q
     ||||||||||||||||| |||| | || ||  ||| ||||||||| ||||| ||||||||||||||||    
T  2501538 gtattttttacaaacgcgtgtatggggaagggcactgtagtaccctacccatagggtacccattgtcat 2501470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 91 - 251
Target Start/End: Complemental strand, 48514512 - 48514352
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||| | |||| || ||||||| ||| ||| |||||||||||| ||||||||  |||||| ||||| | ||||||||||||| |||||| ||||    
T  48514512 atcttttcatggctaaaatgcgggtaatgggtacggttatgggcacttaagtgcccatagggtatgggaaagagcactaaagttgttgtccacgagggta 48514413  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccct 251  Q
    ||  | ||||||||   ||||||||||||||||||||| |  |||||||||||||||||||    
T  48514412 cggacacgggtacgagcattttttacaaacgcgggtatgggaatggatactatagtaccct 48514352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 19996704 - 19996891
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||  |||||| ||||||| ||||||||||||  ||||||| | |||||  |||||| | ||||| |||||||||||||||||||| |||||    
T  19996704 tcttttcatagtcaaagtgcgggtaatgggtgcgggtatgaacacttagatacccatagggtatggggaagggcactaaagttgttgcccacgagggtac 19996803  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | || | ||||||  || |||||||||| |||| ||| | |||||  | | ||||||||| ||||||||| |||||||||||| ||||    
T  19996804 gggcacaggtacgagtaatttttacaaatgcggatatggggatgggcattgtagtaccctacccattgggcacccattgtcatcccta 19996891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 104 - 279
Target Start/End: Original strand, 35978550 - 35978724
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| ||||||| ||||||||||||||||||||||| |||||  |||||| | ||||| ||||||||||||||||  | |||||||  | |||||||    
T  35978550 taaagtgcgggtaatgggtgcgggtatgggcacttaggtacccatagggtatggggaaggggactaaagttgttgcccttg-aggtacggacacgggtac 35978648  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || ||||||||| ||| | |||||| | || ||  ||| ||||||||| |||||||||||||||||| ||| ||||    
T  35978649 gggtattttttataaatgtgggtatggggacgggcactgtagtaccctacccattgggtacccattgccatcccta 35978724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 94 - 287
Target Start/End: Original strand, 29054636 - 29054829
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||| ||||||||| |||||  |||||| | ||||| || |||||||||||||||||   |||||    
T  29054636 ttttcatagttaaagtgcgggtaatgggtgcgggtatggacacttaggtacccatagggtatggggaaggggaccaaagttgttgcccacgagaatacga 29054735  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaattgtatc 287  Q
     | |||||||   ||||||||| ||| || ||||| |||||||  | |  ||||||||  ||||||||||||||||| ||| ||||||| ||||    
T  29054736 acacgggtacatgtattttttataaatgcaggtatggagatgggcaatgcagtaccctatccattgggtacccattgccatccctaattttatc 29054829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 2975273 - 2975460
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| |||||||  ||||||||||||| |||||| | |||||  ||||||   ||||| |||||||||||||||||||| |||||    
T  2975273 tcttttcatagttaaagtgggggtaatgtgtgcgggtatgggtacttagatacccatagggtatggcgaagggcactaaagttgttgcccacgagggtac 2975372  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
       | ||||||||| || |||||| ||| ||||||||  | ||||| | | |||||| ||  ||||||||||||||||||||| ||||    
T  2975373 agacacgggtacgggtaatttttaaaaatgcgggtatgaaaatggacattgtagtactctatccattgggtacccattgtcatcccta 2975460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 94 - 279
Target Start/End: Complemental strand, 2433339 - 2433153
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattagg-tatgagaaagggtactaaagttgttgcccacgaaggtacg 192  Q
    ||||||||| | ||||||||||||| |||| |||||||||||||||||| |||||  || |||| | ||||  |||||||||||||||||||||||||||    
T  2433339 ttttcatagcttaagtgtgggtaatgggtgagggtatgggcacttaggtacccataggggtatggggaaggacactaaagttgttgcccacgaaggtacg 2433240  T
Q  193 agctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | | ||||||  | ||||| ||||||| | || ||| | |||||  ||||||  ||||| |||||||||||| ||||| ||| ||||    
T  2433239 aacacgggtataggtatttcttacaaatgtggatatggggatgggcactataaaaccctacccattgggtactcattgccatcccta 2433153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 104 - 258
Target Start/End: Original strand, 4052406 - 4052560
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    |||| ||||||||||  || |||||||| |||||||||| |||||  | |||| | || |  ||||||||||||   |||||||||||| ||||||||||    
T  4052406 taaaatgtgggtaatgagtacgggtatgagcacttaggtacccataggatatggggaatgacactaaagttgttattcacgaaggtacgggctcgggtac 4052505  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccatt 258  Q
    ||| ||||||||||||||||||||| | || ||||||||| ||||||| ||||||    
T  4052506 ggacattttttacaaacgcgggtatggggaaggatactattgtaccctacccatt 4052560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 198 - 269
Target Start/End: Complemental strand, 48985115 - 48985044
Alignment:
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  48985115 gggtacggatattttttacgaacgcgggtatggagatgggtaccatagtaccctgcccattgggtacccatt 48985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 94 - 279
Target Start/End: Original strand, 22580097 - 22580282
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| |||| || || ||||||||||||||||||||||| |||| |||||  | |||| |||| || |||||| || ||| |||||  | ||||     
T  22580097 ttttcatagttaaattgcggataattggtgcgggtatgggcactaaggtacccataggatatgggaaaaggcactaaaattattgtccacggggatacgg 22580196  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
     ||||||||||| |||||||||||||| ||||||| | || ||  | | ||||||||| ||||| || ||||||||||||| ||||    
T  22580197 actcgggtacgggtattttttacaaacacgggtattgggacgggcattgtagtaccctacccataggatacccattgtcatcccta 22580282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 25059180 - 25059087
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacga 185  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||||||| | |||||  |||||| | ||||| ||||||||||||||||||||    
T  25059180 tcttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttagatacccatagggtatggggaagggcactaaagttgttgcccacga 25059087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 228
Target Start/End: Complemental strand, 50099893 - 50099756
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||  | |||||||  |||||| |||||||||||||||||||| |||||||| |||| || | ||| | |||||| ||||| |||| || ||||    
T  50099893 atcttttcacggttaaagtgcaggtaatgggtgcgggtatgggcacttaagtgcccataaggtgtggggaagagcactaaaattgttacccatgagggta 50099794  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtat 228  Q
    ||  |||||||||||  |||||||||||||||||||||    
T  50099793 cggactcgggtacgggcattttttacaaacgcgggtat 50099756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 279
Target Start/End: Original strand, 44327960 - 44328140
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||| ||||||||| |||||  |||||| | ||||| |||||||||||||| ||||| ||||       
T  44327960 ttttcatagttaaagtgcgggtaatgggtgcgggtatggacacttaggtacccatagggtatggggaaggggactaaagttgttgctcacgagggta--- 44328056  T
Q  194 gctcgggtacggata-ttttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
       ||||||| | || ||||||| |||  ||||||| | || ||  ||| |||||| || |||||||||||||||||||||| ||||    
T  44328057 ---cgggtacaggtatttttttataaatacgggtatggggacggtcactgtagtactctacccattgggtacccattgtcatcccta 44328140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 610789 - 610689
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| ||||||| |||||||||||| ||||||| || |||||  |||||| | ||| | |||||||||||||||||||| |||||    
T  610789 tcttttcatagttaaagtgcgggtaatgggtgcgggtatgtgcacttaagtacccatagggtatggggaagagaactaaagttgttgcccacgagggtac 610690  T
Q  192 g 192  Q
    |    
T  610689 g 610689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 92 - 281
Target Start/End: Original strand, 35949629 - 35949806
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||| || |||| || ||||||| ||||||||||||||||||||||||||||   |||||| | || |  ||||||||||||| ||||||          
T  35949629 tcttttcagagttaaactgcgggtaatgggtgcgggtatgggcacttaggtgcccacagggtatggggaatgacactaaagttgttgtccacga------ 35949722  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
          ||||||| ||||||||||||||||| ||||||| ||||| ||||||| | |||| |||||||  ||||||||| ||| ||||||    
T  35949723 ------gggtacgaatattttttacaaacgcaggtatagggatgggtactataattccctacccattgaatacccattgccatccctaat 35949806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 424650 - 424528
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||| || |||    | |||  | |||||  ||||||||||||||||||| |||||    
T  424650 tcttttcatagttaaagtgtgggtaatgggtgcaggtatgggcacttaagtacccgcaggatattgggaagggggctaaagttgttgcccacgagggtac 424551  T
Q  192 gagctcgggtacggatatttttt 214  Q
    | || ||||||||| ||||||||    
T  424550 gggcacgggtacgggtatttttt 424528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 270
Target Start/End: Complemental strand, 7842645 - 7842468
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| |||||||  |||||||||||||||||||| | |||||   |||||   ||||| |||||||| ||||| |||| ||||||    
T  7842645 tcttttcatagttaaagtgcgggtaatgagtgcgggtatgggcacttagatacccatagagtatggagaagggcactaaagtagttgcacacg-aggtac 7842547  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    | || || |||||  || |||||||| | |||||||| | |||||  | | |||||||||  |||||||||||||||||    
T  7842546 gggcacgagtacgtgtaatttttacagatgcgggtatggggatgggcattgtagtaccctatccattgggtacccattg 7842468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 228
Target Start/End: Complemental strand, 9473027 - 9472891
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| | ||||| |||||||||||| | |||||| | ||||| ||||||| ||||    |||||||||||||||||||| | |||    
T  9473027 tcttttcatagttaaagtgcgagtaatgggtgcgggtatgagtacttagatacccataaggtatgggaaaatacactaaagttgttgcccacgaggatac 9472928  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtat 228  Q
    |  ||  |||||||| |||||||||| | ||||||||    
T  9472927 ggacttaggtacggacattttttacatatgcgggtat 9472891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 259
Target Start/End: Complemental strand, 945547 - 945392
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| ||||||| ||||||||||||||||||||| | |||||  | |||| | ||||| |||||||||||||||||||| | |||| ||  | ||||    
T  945547 taaagtgcgggtaatgggtgcgggtatgggcacttagatacccataggatatggggaagggcactaaagttgttgcccacgaggatacgggcatgtgtac 945448  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    || || |||||| |||  ||||||| | |||||  | | ||||||||| |||||||    
T  945447 gggtaatttttaaaaatacgggtatggggatgggcattgtagtaccctacccattg 945392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 32835539 - 32835629
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgccca 182  Q
    ||||||||||| ||||||| |||||||  ||||||||||| |||||||||| ||||| | ||||||| ||||| |||||| || |||||||    
T  32835539 tcttttcatagttaaagtgcgggtaatgagtgcgggtatgagcacttaggtacccataaagtatgaggaagggcactaaaattattgccca 32835629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 259
Target Start/End: Complemental strand, 38491469 - 38491331
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    |||||||||||||||||||| | |||||  |||||| | ||||||||||||||||||||| |||| |||||| || |  |||||  || ||||||||||     
T  38491469 gtgcgggtatgggcacttagatacccatagggtatggggaagggtactaaagttgttgcctacgagggtacgggcacatgtacgattaatttttacaaat 38491370  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattg 259  Q
    ||||| ||   |||||| | | ||||||||| |||||||    
T  38491369 gcgggaatgaggatggacattgtagtaccctacccattg 38491331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 12560673 - 12560785
Alignment:
Q  166 actaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacc 265  Q
    ||||||||||||||||| || | ||||  | ||||||||| ||||||||| ||| |||||||||| || ||  ||||||||| ||| || ||||||||||    
T  12560673 actaaagttgttgcccatgaggatacggacacgggtacgggtattttttataaatgcgggtatagggacgggcactatagta-cctacctattgggtacc 12560771  T
Q  266 cattgtcattccta 279  Q
    |||||| |||||||    
T  12560772 cattgttattccta 12560785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 27783565 - 27783472
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatatttttt 214  Q
    ||||||||||||||||| |||| |||||    |||| | ||||| |||||||||||||||||||| |||||| || ||||||||| ||||||||    
T  27783565 gtgcgggtatgggcactgaggtacccatagactatggggaaggggactaaagttgttgcccacgagggtacgggcacgggtacgggtatttttt 27783472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 32133501 - 32133389
Alignment:
Q  170 aagttgttgcccacgaaggtacgagctc-gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccat 268  Q
    ||||| |||||||||| ||||||  | | ||||||||  |||||| |||||  ||||||| | ||||| |||||||||||||| ||||||||||||||||    
T  32133501 aagtttttgcccacgagggtacggacacagggtacgggcatttttcacaaatacgggtatggggatggttactatagtaccctacccattgggtacccat 32133402  T
Q  269 tgtcattcctaat 281  Q
    || ||| ||||||    
T  32133401 tgccatccctaat 32133389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 33794442 - 33794530
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacg 192  Q
    ||||||| | ||||| ||||||| |||| |||||||||| |||||  |||||| | ||||| ||||||||||||||| |||||||||||    
T  33794442 taaagtgcgagtaatgggtgcggatatgagcacttaggtacccatagggtatggggaaggggactaaagttgttgcctacgaaggtacg 33794530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 34320954 - 34320850
Alignment:
Q  166 actaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacc 265  Q
    ||||||||| || ||||||| |||| | |||||| |||  | ||||||||||||||||||||| | || || ||||||||||| || |||||||| ||||    
T  34320954 actaaagttattacccacgagggtatgggctcggatacatacattttttacaaacgcgggtatggggaagggtactatagtactctacccattggatacc 34320855  T
Q  266 cattg 270  Q
    |||||    
T  34320854 cattg 34320850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 30623029 - 30623120
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacga 185  Q
    ||||||||| |||||| | |||||| ||||||||||||| ||||||| | | |||  |||||| | ||||| ||||||||||||||||||||    
T  30623029 ttttcatagttaaagtataggtaatgggtgcgggtatggacacttagctactcatagggtatggggaagggaactaaagttgttgcccacga 30623120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 233
Target Start/End: Original strand, 43634670 - 43634808
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    |||||||||  |||||| |||| ||  |||||| ||||| ||||||||| |||||  |||||| ||| ||| |||||||||||||||||||| |||||      
T  43634670 ttttcatagtaaaagtgcgggtgatgagtgcggatatggacacttaggtacccatagggtatgggaagggg-actaaagttgttgcccacgagggtacag 43634768  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagaga 233  Q
    || | ||| ||| ||||||||| ||| |||||||| ||||    
T  43634769 gcacaggtgcgggtattttttataaatgcgggtatggaga 43634808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 28192547 - 28192610
Alignment:
Q  129 atgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacg 192  Q
    ||||||||||| ||||||||  |||||| | ||||| ||||||||||||||||| |||||||||    
T  28192547 atgggcacttaagtgcccatagggtatggggaagggcactaaagttgttgcccatgaaggtacg 28192610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 973588 - 973498
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgccca 182  Q
    ||||||||||  ||||||| || |||| ||||||| |||| |||||||||| |||||  |||||| |||| |  |||||||||||||||||    
T  973588 tcttttcataattaaagtgcggataatgggtgcggatatgtgcacttaggtacccatagggtatgggaaatgacactaaagttgttgccca 973498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 214
Target Start/End: Original strand, 31107709 - 31107799
Alignment:
Q  124 cgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatatttttt 214  Q
    |||||||| ||||||| || |||||  ||||||   ||||| || ||| ||||||||||||||| |||||||| |||||||| ||||||||    
T  31107709 cgggtatgagcacttaagtacccatagggtatggagaagggcaccaaatttgttgcccacgaagatacgagcttgggtacgggtatttttt 31107799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 16177146 - 16177259
Alignment:
Q  166 actaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacc 265  Q
    |||||| || || ||||| || ||||| |||| ||||||   ||||||||||||| ||||||| | || || ||||||||| ||||||| ||| ||||||    
T  16177146 actaaaattattacccacaaaagtacgggctcaggtacgagcattttttacaaacacgggtatggggaagggtactatagttccctgcctattaggtacc 16177245  T
Q  266 cattgtcattccta 279  Q
    ||||| ||| ||||    
T  16177246 cattgacatcccta 16177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 3192183 - 3192247
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatg 156  Q
    ||||||||||||| ||||  || |||| | ||||||||||| ||||||||||||||| |||||||    
T  3192183 tcttttcatagattaagttcggataatggatgcgggtatggacacttaggtgcccataaggtatg 3192247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 3201001 - 3201065
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatg 156  Q
    ||||||||||||| ||||  || |||| | ||||||||||| ||||||||||||||| |||||||    
T  3201001 tcttttcatagattaagttcggataatggatgcgggtatggacacttaggtgcccataaggtatg 3201065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 3209838 - 3209902
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatg 156  Q
    ||||||||||||| ||||  || |||| | ||||||||||| ||||||||||||||| |||||||    
T  3209838 tcttttcatagattaagttcggataatggatgcgggtatggacacttaggtgcccataaggtatg 3209902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 46772564 - 46772667
Alignment:
Q  125 gggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgg 224  Q
    ||||||| ||||||||||||||||  |||||| | || |  |||||||||||| ||||||| | ||||  ||||||||| |   ||||||||||||| ||    
T  46772564 gggtatgagcacttaggtgcccatagggtatggggaatgacactaaagttgttacccacgaggatacggactcgggtacaggcgttttttacaaacgagg 46772663  T
Q  225 gtat 228  Q
    ||||    
T  46772664 gtat 46772667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 270
Target Start/End: Original strand, 21260837 - 21260941
Alignment:
Q  166 actaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacc 265  Q
    |||||||||||||||||||| |||| |  | |||  || |||| |||||| ||| |||||||| | |||||  | | ||||||||| |||||| ||||||    
T  21260837 actaaagttgttgcccacgagggtatggacacggacactgataatttttaaaaatgcgggtatggggatgggcattgtagtaccctacccattaggtacc 21260936  T
Q  266 cattg 270  Q
    |||||    
T  21260937 cattg 21260941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 32133549 - 32133501
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcactta 139  Q
    |||||||||| | ||||||| |||||||  |||||||||||||||||||    
T  32133549 atcttttcatggctaaagtgcgggtaatgagtgcgggtatgggcactta 32133501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 9e-52; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 45079238 - 45079425
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||| || |||||| ||||||| |||||||||||||||||||| ||||||||  |||||| | ||||| |||||||||||||||||||| |||||    
T  45079238 tcttttcatcgagaaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccatagggtatggggaagggcactaaagttgttgcccacgagggtac 45079337  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | ||||||||||||| |||||||||||| | |||||| | ||||| ||||||||||||||  ||||||||||||||||||||| ||||    
T  45079338 gggctcgggtacggacattttttacaaatgagggtatggggatgggtactatagtaccctatccattgggtacccattgtcatcccta 45079425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 91 - 279
Target Start/End: Complemental strand, 5908307 - 5908119
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    ||||||| || | ||||||| |||||||||||| ||||||||||||||| |||| |||  |||||  ||||||| |||||||||||||||||||| ||||    
T  5908307 atctttttatggctaaagtgcgggtaattggtgtgggtatgggcacttaagtgctcatagggtataggaaagggcactaaagttgttgcccacgagggta 5908208  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || || | |||| ||  ||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  5908207 cgggcacaggtatgggcattttttacaaacgcgggtatggggatggatactatagtaccctacccattgggtacccattgccatcccta 5908119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 97 - 279
Target Start/End: Complemental strand, 19618755 - 19618573
Alignment:
Q  97 tcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagct 196  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||  ||||  |||||| | ||||| |||||||||||||||||||| |||||||||     
T  19618755 tcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggtatccatagggtatggggaagggaactaaagttgttgcccacgagggtacgagca 19618656  T
Q  197 cgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||||||||||||||||||| ||| |||||||| | || ||| | | |||||||||||||||||| ||||||||| ||| ||||    
T  19618655 cgggtacggatattttttataaatgcgggtatggggacggacaatgtagtaccctgcccattggatacccattgccatcccta 19618573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 42096775 - 42096962
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||  |||||| | ||||| ||||||||||||| ||||||||||||    
T  42096775 tcttttcatagagaaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccatagggtatggggaagggcactaaagttgttgtccacgaaggtac 42096874  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | ||||||||| ||| |||||||||||| | |||||| | || || ||||||||||| ||  ||||| |||| |||||||||| ||||    
T  42096875 gggctcgggtatggacattttttacaaatgagggtatggggacgggtactatagtactctatccatttggtatccattgtcatcccta 42096962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 91 - 285
Target Start/End: Complemental strand, 49374869 - 49374675
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||| | ||||||| ||||||| |||||||||||| ||||||| ||||||||  |||||| ||||||  |||||| |||||| |||||| | ||    
T  49374869 atcttttcatggctaaagtgcgggtaatgggtgcgggtatgagcacttaagtgcccatagggtatgggaaaggacactaaaattgttgtccacgaggata 49374770  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaattgta 285  Q
    || || ||| ||||| |||||||||||||| ||||||| | |||||||||||||||| ||| |||||||||||||||||| ||| ||||| ||||    
T  49374769 cgggcacggatacgggtattttttacaaacacgggtatggggatggatactatagtatcctacccattgggtacccattgccatccctaaatgta 49374675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 91 - 279
Target Start/End: Original strand, 10085292 - 10085480
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||| | ||||||| ||||||| |||| ||||||| ||||||| || |||||  |||||| | ||||| |||||||||||||||||||| ||||    
T  10085292 atcttttcatggctaaagtgcgggtaataggtgagggtatgagcacttaagtacccatagggtatggggaagggcactaaagttgttgcccacgagggta 10085391  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
     | || ||| ||| || ||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||| ||| ||||    
T  10085392 tgggcacggatacagacattttttacaaacgcgggtatggagatggatactgtagtaccctatccattgggtacccattgccatcccta 10085480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 91 - 279
Target Start/End: Original strand, 10192212 - 10192400
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||| | ||||||| ||||||| |||| ||||||| ||||||| || |||||  |||||| | ||||| |||||||||||||||||||| ||||    
T  10192212 atcttttcatggctaaagtgcgggtaataggtgagggtatgagcacttaagtacccatagggtatggggaagggcactaaagttgttgcccacgagggta 10192311  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
     | || ||| ||| || ||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||| ||| ||||    
T  10192312 tgggcacggatacagacattttttacaaacgcgggtatggagatggatactgtagtaccctatccattgggtacccattgccatcccta 10192400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 104 - 279
Target Start/End: Complemental strand, 27064255 - 27064080
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||  |||||||| ||  | |||||||||||| |||||||  ||||| ||||||| ||    
T  27064255 taaagtgtgggtaatgggtacgggtgtgggcacttaggtgcccatagggtatgaggaaatgcactaaagttgttacccacgagtgtacgggctcgggcac 27064156  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||  ||||||||||||||||||||| | || || |||||| ||||||| |||||||||||||||||||||| ||||    
T  27064155 gggcattttttacaaacgcgggtatggggaagggtactattgtaccctacccattgggtacccattgtcatcccta 27064080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 94 - 282
Target Start/End: Complemental strand, 19454858 - 19454670
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| |||| |||||||||| ||||| | ||||| |||||| ||||||||   ||||| | |||||||||||||||||||||||||| |||||||    
T  19454858 ttttcatagttaaaatgtgggtaatgggtgcagatatggacacttaagtgcccatagagtatggggaagggtactaaagttgttgcccacgagggtacga 19454759  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaatt 282  Q
    |  ||||||||   ||||||||||||||| || || | ||||| ||||||||||||||  ||||||||||||||||| ||| |||||||    
T  19454758 gtccgggtacgagcattttttacaaacgcaggcatggggatgggtactatagtaccctatccattgggtacccattgccatccctaatt 19454670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 30248087 - 30248273
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| ||||||| ||||||||||||  |||||||  |||||| | ||||| |||||||||||||||||||| |||||    
T  30248087 tcttttcatagagaaagtgcgggtaatgggtgcgg-tatgggcacttaattgcccatagggtatggggaagggcactaaagttgttgcccacgagggtac 30248185  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |  || ||||||||  |||||||||||| | |||||| | ||||| ||||||||||||||  ||||||||||||||||| ||| ||||    
T  30248186 ggacttgggtacgggcattttttacaaatgagggtatggggatgggtactatagtaccctatccattgggtacccattgccatcccta 30248273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 104 - 279
Target Start/End: Complemental strand, 32995297 - 32995122
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| ||||||| |||||||||||| ||||||| ||||||||  |||||| | ||||  ||||||||||||| |||||| |||||| || || ||||    
T  32995297 taaagtgcgggtaatgggtgcgggtatgagcacttaagtgcccatagggtatgtggaaggacactaaagttgttgtccacgagggtacgggcacgagtac 32995198  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | | ||||||||||||||| ||||| | |||||||||||||||||||| || ||||||||||||||| ||| ||||    
T  32995197 gaacattttttacaaacgcaggtatggggatggatactatagtaccctacctattgggtacccattgccatcccta 32995122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 92 - 279
Target Start/End: Complemental strand, 35688377 - 35688190
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| || ||||||| |||||||||||||||||||||||||||||  | |||| | ||||| |||||||||||||||||| | |||||    
T  35688377 tcttttcatagttaaaatgcgggtaatgggtgcgggtatgggcacttaggtgcccataggatatggggaagggcactaaagttgttgcccacaagggtac 35688278  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |    || || |||||||||||||||||||||||||| |  || |||||||||||||||| |||||||| ||| ||||| ||| ||||    
T  35688277 ggatccgtgtgcggatattttttacaaacgcgggtatgggaatagatactatagtaccctacccattggatactcattgccatcccta 35688190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 41410290 - 41410477
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||||| |||  ||| |  | ||||| |||||||||||||||||||| |||||    
T  41410290 tcttttcatagagaaagtgtgggtaatgcgtgcgggtatgggcacttaggtgctcatagggtgtagggaagggcactaaagttgttgcccacgagggtac 41410389  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |  ||||||||| || |||||||||||| | |||||| | ||||| |||||||||| |||  |||||| |||||||||| ||| ||||    
T  41410390 ggactcgggtacagacattttttacaaatgagggtatggggatgggtactatagtatcctatccattgagtacccattgccatcccta 41410477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 92 - 280
Target Start/End: Complemental strand, 48583804 - 48583617
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||| | ||||||| |||||||   ||| |||||| ||||||| ||||||||  |||||| | ||||| || ||||||||||||||||| |||||    
T  48583804 tcttttcatggttaaagtgcgggtaatgactgcaggtatgtgcacttaagtgcccatagggtatggggaagggcac-aaagttgttgcccacgagggtac 48583706  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    | |||||||||||||| |||||||||||| ||||||| | ||||  |||||||||||  |||||||| ||||||||||| ||| |||||    
T  48583705 gggctcgggtacggattttttttacaaactcgggtatggggatgagtactatagtactatgcccattaggtacccattgccatccctaa 48583617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 93 - 279
Target Start/End: Original strand, 23299554 - 23299740
Alignment:
Q  93 cttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacg 192  Q
    |||||||||| |||| || ||||||| ||||||||||||||||||||| | |||||  |||||| | || |  |||||||||||||||||| | ||||||    
T  23299554 cttttcatagttaaaatgcgggtaatgggtgcgggtatgggcacttagatacccatagggtatggggaatgacactaaagttgttgcccacaagggtacg 23299653  T
Q  193 agctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
     || |||||||||||| |||||| ||| |||||||| | |||||  | | ||||||||| |||||| ||||||||||| ||||||||    
T  23299654 ggcacgggtacggataatttttaaaaatgcgggtatggggatgggcattgtagtaccctacccatttggtacccattgacattccta 23299740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 98 - 280
Target Start/End: Original strand, 44792681 - 44792863
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| ||||| || |||||  |||||| | ||||| |||||||||||||||||||| |||||| || |    
T  44792681 catagttaaagtgcgggtaatgggtgcgggtatgggtacttaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgggcac 44792780  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    || ||||| ||||||||| ||| |||||||| | || ||  | | ||||||||| |||||||||||||||||| ||| |||||    
T  44792781 ggatacgggtattttttataaatgcgggtatggggacgggcattgtagtaccctacccattgggtacccattgccatccctaa 44792863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 94 - 279
Target Start/End: Original strand, 50481098 - 50481283
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| |||||||   |||||||||||||||| |||| |||||  | |||| | ||||| |||||||||||||||||||| ||||||     
T  50481098 ttttcatagttaaagtgcgggtaatgaatgcgggtatgggcactgaggtacccataggctatggggaaggggactaaagttgttgcccacgagggtacgg 50481197  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || ||||||||| ||||||||| ||| ||||| || | || ||  ||| ||||||||| |||||||||||||||||| ||| ||||    
T  50481198 gcacgggtacgggtattttttataaatgcggggatggggacgggcactgtagtaccctacccattgggtacccattgccatcccta 50481283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 98 - 282
Target Start/End: Original strand, 24987445 - 24987629
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| | |||||||||||| ||||| || |||||  |||||| | ||||| |||||||||||||||||||| |||||| || |    
T  24987445 catagttaaagtgcgggtaatggatgcgggtatgggtacttaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgggcac 24987544  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaatt 282  Q
    ||| |||| ||||||||| ||| |||||||| | || ||  | | ||||||||| |||||||||||||||||| ||| |||||||    
T  24987545 gggcacgggtattttttataaatgcgggtatggggacgggcattgtagtaccctacccattgggtacccattgccatccctaatt 24987629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 121 - 279
Target Start/End: Complemental strand, 43657314 - 43657157
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    ||||||||||||||||||| ||||| ||  |||||| | ||||| | |||||||||||||||||| |||||  || || ||||||  |||||||||||||    
T  43657314 gtgcgggtatgggcacttaagtgcctatagggtatggggaagggcaataaagttgttgcccacgagggtacaggcacgagtacgggcattttttacaaac 43657215  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | |||||| | |||||||||||||||| |||  ||||||||||||||||||||| ||||    
T  43657214 gtgggtatggggatggatactatagta-cctagccattgggtacccattgtcatcccta 43657157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 94 - 280
Target Start/End: Complemental strand, 49360035 - 49359849
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| |||||||||||||| ||| |||| |||||  |||||| | ||||| |||||||||||||||||||| ||||||     
T  49360035 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggtactgaggtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgg 49359936  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
     | ||| ||||| ||||||||| ||| |||||||| | ||  |  | | ||||||||| |||||||||||||||||| ||| |||||    
T  49359935 acacggatacgggtattttttataaatgcgggtatggggacaggcagtgtagtaccctacccattgggtacccattgccatccctaa 49359849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 92 - 279
Target Start/End: Complemental strand, 8340216 - 8340041
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| || ||||||| |||||||||||||||||||||||||||||| |||||| | ||||| | ||||||||||   |||||          
T  8340216 tcttttcatagttaaaatgcgggtaataggtgcgggtatgggcacttaggtgcccattgggtatggggaagggcattaaagttgtttttcacga------ 8340123  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
          |||||| || ||||||||||||||||||||| | ||||||||||| ||||||||||| ||||| || |||||||||| ||||    
T  8340122 ------gggtacagacattttttacaaacgcgggtatggggatggatactagagtaccctgcctattggatatccattgtcatcccta 8340041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 26795319 - 26795465
Alignment:
Q  125 gggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggata-ttttttacaaacgcg 223  Q
    ||||||| ||||||||||||||||  |||||||||||||| ||| |||||||| ||||||| |||||| |||||||||| || | |||||||||||| ||    
T  26795319 gggtatgagcacttaggtgcccatagggtatgagaaagggcactgaagttgttacccacgagggtacgggctcgggtactgacatttttttacaaacacg 26795418  T
Q  224 ggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    ||||| | || || |||||||||||| | || |||| ||||||||||    
T  26795419 ggtatggggaagggtactatagtaccatacctattgagtacccattg 26795465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 19873168 - 19873001
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||||||  |||||| ||||||||||||||||||||||| ||||| | ||||| | | ||| |||||||||||||||||||| |||||    
T  19873168 tcttttcatagttaaagtgcaggtaatgggtgcgggtatgggcacttaggtacccataaagtatggggaggggcactaaagttgttgcccacgagggtac 19873069  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    | || | ||||    || |||||||||| ||||||||  ||||||  | ||||||||||| |||||||    
T  19873068 gggcacaggtatatgtaatttttacaaatgcgggtatgaagatgggcattatagtaccctacccattg 19873001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 94 - 224
Target Start/End: Complemental strand, 6408647 - 6408517
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||  |||| | | ||| | |||||||||||||||||||| |||| |     
T  6408647 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggtacccatagggtacggggaagaggactaaagttgttgcccacgagggtaggg 6408548  T
Q  194 gctcgggtacggatattttttacaaacgcgg 224  Q
    || ||||||||| ||||||||| ||| ||||    
T  6408547 gcacgggtacgggtattttttataaatgcgg 6408517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 112 - 281
Target Start/End: Complemental strand, 25467541 - 25467372
Alignment:
Q  112 gggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattt 211  Q
    ||||||| |||||||||||| |||||||| | ||||| || |||| | ||||| |||||||||||||||||||| |||| | || ||||| ||| || ||    
T  25467541 gggtaatgggtgcgggtatgagcacttagatacccataagatatggggaagggcactaaagttgttgcccacgagggtatgggcacgggtgcgggtaatt 25467442  T
Q  212 tttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    |||| ||| |||| ||| | |||||  | | ||||||||| |||||||||||||||||| ||| ||||||    
T  25467441 tttaaaaatgcggatatggggatgggcattgtagtaccctacccattgggtacccattgccatccctaat 25467372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 91 - 259
Target Start/End: Complemental strand, 35732312 - 35732144
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||| ||| | |||||||||||||||  ||||||||||||||||||| ||||||||  ||| || | ||||  |||||| ||||||||||||| ||||    
T  35732312 atctttccatggctaaagtgtgggtaatgagtgcgggtatgggcacttaagtgcccatagggtctggggaaggacactaaaattgttgcccacgagggta 35732213  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    || || ||| ||| |  ||||||||||||||||| |||   |||| ||| ||||||||||| |||||||    
T  35732212 cgggcacggatacagtcattttttacaaacgcggatatgaggatgaatattatagtaccctacccattg 35732144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 91 - 259
Target Start/End: Original strand, 38694845 - 38695013
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||| | ||||||| |||||||  |||||||||||| |||||| ||| ||||  |||||| | ||||| ||||||||| |||||||||| ||||    
T  38694845 atcttttcatggctaaagtgcgggtaatgagtgcgggtatggacacttaagtgtccatagggtatggggaagggcactaaagtttttgcccacgagggta 38694944  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    ||  | ||||||| |  |||||| ||||| |||| ||| | ||||| |||||||||||||| |||||||    
T  38694945 cggacacgggtacaggcatttttcacaaatgcggatatggggatgggtactatagtaccctacccattg 38695013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 94 - 279
Target Start/End: Complemental strand, 39352534 - 39352354
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| |||| |||||||||||||||||| | |||  |||||| | ||||| ||||||||||||||||||||      |     
T  39352534 ttttcatagttaaagtgcgggtaatgggtgtgggtatgggcacttaggtactcatagggtatggggaaggggactaaagttgttgcccacga------gg 39352441  T
Q  194 gctcgggtacggata-ttttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || ||||||||| || ||||||| ||| |||||||| | || ||  ||| ||||||||| |||||| ||||||||||||||| ||||    
T  39352440 gcacgggtacgggtatttttttataaatgcgggtatggggacgggcactgtagtaccctacccattaggtacccattgtcatcccta 39352354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 279
Target Start/End: Original strand, 5041085 - 5041273
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||||| ||||||| || |||| ||||| ||||||||||||||| | || ||  |||||| | || |  |||||||||||||||||||| ||||    
T  5041085 atcttttcatagttaaagtgcggataatgggtgcaggtatgggcacttagatacctatagggtatggggaatgacactaaagttgttgcccacgagggta 5041184  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||  | || |||||| || |||||| ||| |||||||| | |||||  | | ||||||||| ||||||||||| |||||| ||| ||||    
T  5041185 cggacacgagtacgggtaatttttaaaaatgcgggtatggggatgggcattgtagtaccctacccattgggtatccattgccatcccta 5041273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 41924038 - 41923907
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| ||||||||||| | |||||| || |||||   ||||| | ||||| |||||||||||||||||||| ||||||| | |    
T  41924038 catagttaaagtgcgggtaatgggtgcgggtatagacacttaagtacccatagagtatggggaaggggactaaagttgttgcccacgagggtacgaacac 41923939  T
Q  198 gggtacggatattttttacaaacgcgggtata 229  Q
    || ||||| ||||||||| ||| |||||||||    
T  41923938 ggatacgggtattttttataaatgcgggtata 41923907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 92 - 279
Target Start/End: Complemental strand, 48080137 - 48079962
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| |||||||  |||||||||||| ||||||||| |||||  | |||| | ||||| ||||||||||||||||||||          
T  48080137 tcttttcatagttaaagtgcgggtaatgagtgcgggtatggacacttaggtacccataggatatggggaagggcactaaagttgttgcccacga------ 48080044  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
          ||||||||||| |||||||||| | |||||| | |||||  | | ||||||||| |||||||||||||||||| ||| ||||    
T  48080043 ------gggtacggataatttttacaaatgtgggtatggggatgggcattgtagtaccctacccattgggtacccattgccatcccta 48079962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 280
Target Start/End: Original strand, 2013123 - 2013273
Alignment:
Q  128 tatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggta 227  Q
    ||||||||||||| | ||||| |||||||   |||||||||||||||||| |||| || |||||| |||||||||| || |||| |||||||||||||||    
T  2013123 tatgggcacttagattcccataaggtatgg--aagggtactaaagttgttacccatgagggtacgggctcgggtacagacatttcttacaaacgcgggta 2013220  T
Q  228 tagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    |   || || || ||||||||||| || |||||||| || ||| ||| |||||    
T  2013221 tgaggaagggtattatagtaccctacctattgggtatccgttgccatccctaa 2013273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 50508904 - 50508997
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacga 185  Q
    ||||||||||| ||||||| ||||| | ||||| |||||||||||||| || |||||  |||||||||||||| ||||||||||||| ||||||    
T  50508904 tcttttcatagttaaagtgcgggtagtgggtgcaggtatgggcacttaagttcccatagggtatgagaaagggcactaaagttgttgtccacga 50508997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 104 - 251
Target Start/End: Original strand, 9163042 - 9163187
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    |||||||| ||||||  || |||||||||||||||||||||||||  |||||| | ||||  ||||||||||   ||||||| | |||   |||||||||    
T  9163042 taaagtgttggtaataagtacgggtatgggcacttaggtgcccatagggtatggggaagg--actaaagttgccacccacgaggatacagactcgggtac 9163139  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccct 251  Q
    ||| ||||||||||||| ||||||||  || || ||||||||||||||    
T  9163140 ggacattttttacaaacacgggtataaggaagggtactatagtaccct 9163187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 94 - 259
Target Start/End: Original strand, 13735661 - 13735827
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| | ||||| ||||||||||| |||||| |||| |||||  |||||| | ||||| | |||||||||||||||||| | ||||     
T  13735661 ttttcatagttaaagtgcgagtaatgggtgcgggtatcggcactgaggtacccatagggtatggggaaggggattaaagttgttgcccacgaggatacgg 13735760  T
Q  194 gctcgggtacggata-ttttttacaaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    || |||||| || || ||||||| ||| |||||||| | || ||  ||| ||||||||| |||||||    
T  13735761 gcacgggtaagggtatttttttataaatgcgggtatggggacgggcactgtagtaccctacccattg 13735827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 92 - 270
Target Start/End: Complemental strand, 40564018 - 40563836
Alignment:
Q  92 tcttttcatagataaagtgtgggtaatt----ggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaag 187  Q
    ||||||||| | ||||||| ||||||||    ||| ||| ||||||||||||| | | |||  |||||| | ||||| ||||||||||||||||||| ||    
T  40564018 tcttttcattgttaaagtgcgggtaattaatgggtacggttatgggcacttagatactcatagggtatggggaagggcactaaagttgttgcccacggag 40563919  T
Q  188 gtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
     |||| || ||  ||||| || |||||||||| |||||||| | ||||| || | ||||||||| | ||||||||||| ||||    
T  40563918 atacgggcacgaatacgggtaatttttacaaatgcgggtatggggatgggtattgtagtaccctacacattgggtacctattg 40563836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 279
Target Start/End: Complemental strand, 46819233 - 46819048
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||||||||||| |||| ||||||| |||||||||| ||||   ||||||   ||||| |||||||||||| |||||||  ||| |     
T  46819233 ttttcatagctaaagtgtgggtaataggtgagggtatgagcacttaggtacccacagggtatggagaagggcactaaagttgttacccacgagagtatgg 46819134  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
     | |||||| |  ||||| ||||||| | || ||| | |||||  | |||||||||||  ||||||||||||||||| ||| ||||    
T  46819133 acacgggtatgtgtatttcttacaaatgtggatatggggatgggcattatagtaccctatccattgggtacccattgccatcccta 46819048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 275
Target Start/End: Original strand, 6083579 - 6083758
Alignment:
Q  96 ttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagc 195  Q
    ||||||||||||||| ||||||| |||   | |||| |||||||||| |||||  |||||| |||| |||||||| || ||||||||| | |||| |  |    
T  6083579 ttcatagataaagtgcgggtaataggtatagatatgagcacttaggtacccatagggtatgggaaatggtactaaggtagttgcccacaagggtatggac 6083678  T
Q  196 tcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcatt 275  Q
    ||||||||  | |||||||||||| ||||||||  |  ||| ||||||| |||| ||| || ||| ||||||| ||||||    
T  6083679 tcgggtaccaacattttttacaaatgcgggtatgaatgtgggtactataataccatgctcaatggatacccatcgtcatt 6083758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 270
Target Start/End: Complemental strand, 33099721 - 33099543
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| |||| ||  ||||||  ||| ||||| |||| |||||  |||| |   ||||| | ||||||||||| ||||||||||||    
T  33099721 tcttttcatagttaaagtgagggtgatgagtgcggcaatgtgcactaaggtacccatagggtacggagaagggcattaaagttgttggccacgaaggtac 33099622  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    | |||| ||||||  ||||| ||||||||||| |||| |||| ||  ||| ||||||||| | ||| ||| ||||||||    
T  33099621 gggctcaggtacgagtatttattacaaacgcgagtatggagaagggcactgtagtaccctactcatagggcacccattg 33099543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 20825435 - 20825355
Alignment:
Q  173 ttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgc 253  Q
    ||||||||||||||||||||||||||  |||| | || ||||| |||| ||||||||  |||||| |||||||||||||||    
T  20825435 ttgttgcccacgaaggtacgagctcgaatacgaacatattttataaacacgggtataaggatggacactatagtaccctgc 20825355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 219
Target Start/End: Complemental strand, 51055527 - 51055407
Alignment:
Q  99 atagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcg 198  Q
    |||| ||||||| || |||| | ||| |||||| |||||||||||| |||  |||||||| || |  |||||||||||||||||| | | ||||||||||    
T  51055527 atagttaaagtgcggataatggatgcaggtatgtgcacttaggtgctcatagggtatgaggaatgccactaaagttgttgcccacaaggatacgagctcg 51055428  T
Q  199 ggtacggatattttttacaaa 219  Q
    |||||   |||||||||||||    
T  51055427 ggtacatgtattttttacaaa 51055407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 280
Target Start/End: Complemental strand, 12905687 - 12905502
Alignment:
Q  95 tttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgag 194  Q
    |||||||| ||||||| | ||||| |||||| |||| | ||||||||| |||||   || || | ||||  ||||||||| ||||||||||  ||||| |    
T  12905687 tttcatagttaaagtgcgagtaatgggtgcgagtatagacacttaggtacccatagagtttggggaaggacactaaagttattgcccacgactgtacggg 12905588  T
Q  195 ctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    | ||||||||  || |||||||||| | |||||| | |||||| | | ||||||| | || ||| ||||||||||| ||| |||||    
T  12905587 cacgggtacgagtaatttttacaaatgtgggtatggggatggacattgtagtaccatacctattcggtacccattgccatccctaa 12905502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 7940407 - 7940356
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggt 142  Q
    |||||||||||| ||||||| ||||||| | |||||||||||||||||||||    
T  7940407 atcttttcatagctaaagtgcgggtaatggatgcgggtatgggcacttaggt 7940356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 27346627 - 27346532
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttac 216  Q
    |||||||||||||||||||  | |||||  | |||| | || || |||||||||||||||| ||| |||||| |||||||||||| | ||||||||    
T  27346627 gtgcgggtatgggcacttaattacccataggatatggggaaaggcactaaagttgttgccctcgagggtacgggctcgggtacggtttttttttac 27346532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 39961463 - 39961403
Alignment:
Q  207 tattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtaccca 267  Q
    ||||||||| |||||||||||| | |||||  ||||||||||||||||||  |||||||||    
T  39961463 tattttttataaacgcgggtatggggatgggcactatagtaccctgcccaaagggtaccca 39961403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 11671812 - 11671771
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatggg 133  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||    
T  11671812 tcttttcatagttaaagtgcgggtaatgggtgcgggtatggg 11671771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 2150711 - 2150839
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||  ||||||| | ||||| ||| ||| ||||||| ||||||||||||| | ||||| |  | || |||||| ||||  ||||||| | |||    
T  2150711 tcttttcataattaaagtgcgagtaatgggtacggctatgggcccttaggtgcccataaagtatggggtatggcactaaaattgtcacccacgaggatac 2150810  T
Q  192 gagctcgggtacggatattttttacaaac 220  Q
    | ||||||||| |  ||||||| ||||||    
T  2150811 gggctcgggtatgagtatttttgacaaac 2150839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 4e-51; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 92 - 269
Target Start/End: Complemental strand, 222063 - 221885
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| || ||||||| |||||||||||| ||||||||||||||||  |||||| | ||||  |||||||||||||||||||| |||||    
T  222063 tcttttcatagttaaaatgcgggtaatgggtgcgggtatgagcacttaggtgcccatagggtatggggaaggacactaaagttgttgcccacgagggtac 221964  T
Q  192 gagctcgggtacggatatt-ttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    | | ||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  221963 gggttcgggtacggatatttttttacaaacgcgggtatggagatggatactataataccctacccattgggtacccatt 221885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 92 - 269
Target Start/End: Complemental strand, 691218 - 691040
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| || ||||||| |||||||||||| ||||||||||||||||  |||||| | ||||  |||||||||||||||||||| |||||    
T  691218 tcttttcatagttaaaatgcgggtaatgggtgcgggtatgagcacttaggtgcccatagggtatggggaaggacactaaagttgttgcccacgagggtac 691119  T
Q  192 gagctcgggtacggatatt-ttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    | | ||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  691118 gggttcgggtacggatatttttttacaaacgcgggtatggagatggatactataataccctacccattgggtacccatt 691040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 92 - 269
Target Start/End: Complemental strand, 735686 - 735508
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| || ||||||| |||||||||||| ||||||||||||||||  |||||| | ||||  |||||||||||||||||||| |||||    
T  735686 tcttttcatagttaaaatgcgggtaatgggtgcgggtatgagcacttaggtgcccatagggtatggggaaggacactaaagttgttgcccacgagggtac 735587  T
Q  192 gagctcgggtacggatatt-ttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    | | ||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  735586 gggttcgggtacggatatttttttacaaacgcgggtatggagatggatactataataccctacccattgggtacccatt 735508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 92 - 269
Target Start/End: Complemental strand, 859582 - 859404
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| || ||||||| |||||||||||| ||||||||||||||||  |||||| | ||||  |||||||||||||||||||| |||||    
T  859582 tcttttcatagttaaaatgcgggtaatgggtgcgggtatgagcacttaggtgcccatagggtatggggaaggacactaaagttgttgcccacgagggtac 859483  T
Q  192 gagctcgggtacggatatt-ttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    | | ||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  859482 gggttcgggtacggatatttttttacaaacgcgggtatggagatggatactataataccctacccattgggtacccatt 859404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 92 - 280
Target Start/End: Complemental strand, 20216287 - 20216099
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||  ||||| |||||||||||||| |||||||| || |||| | ||||| |||||||||||||||||||| |||||    
T  20216287 tcttttcatagagaaagtgcgggtaacgggtgcaggtatgggcacttaagtgcccataagatatggggaagggcactaaagttgttgcccacgagggtac 20216188  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    | ||||||||||||| |||||||||||| | |  ||| | ||||| ||||||||||||||  ||||||||||||||||| ||| |||||    
T  20216187 gggctcgggtacggacattttttacaaatgagcttatggggatgggtactatagtaccctatccattgggtacccattgccatccctaa 20216099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 92 - 280
Target Start/End: Complemental strand, 20235885 - 20235697
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||  ||||| |||||||||||||| |||||||| || |||| | ||||| |||||||||||||||||||| |||||    
T  20235885 tcttttcatagagaaagtgcgggtaacgggtgcaggtatgggcacttaagtgcccataagatatggggaagggcactaaagttgttgcccacgagggtac 20235786  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    | ||||||||||||| |||||||||||| | |  ||| | ||||| ||||||||||||||  ||||||||||||||||| ||| |||||    
T  20235785 gggctcgggtacggacattttttacaaatgagcttatggggatgggtactatagtaccctatccattgggtacccattgccatccctaa 20235697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 112 - 279
Target Start/End: Complemental strand, 7580117 - 7579950
Alignment:
Q  112 gggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattt 211  Q
    ||||||| |||||||||||||||||||||||||||||  |||||| | ||||| |||||||||||| ||||||| |||||| || |||||||||  ||||    
T  7580117 gggtaatgggtgcgggtatgggcacttaggtgcccatagggtatggggaagggcactaaagttgttacccacgagggtacgggcacgggtacggccattt 7580018  T
Q  212 tttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||||||||| ||||||| | ||||| |||||||||||||| |||||||||| ||||||| ||| ||||    
T  7580017 tttacaaacacgggtatggggatgggtactatagtaccctacccattgggtgcccattgccatcccta 7579950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 92 - 269
Target Start/End: Original strand, 19643542 - 19643719
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| ||||||| || |||||||||||||| ||| | |||||  |||||||| ||||| ||||||||||||||||||||||||||    
T  19643542 tcttttcatagttaaagtgcgggtaatgggcgcgggtatgggcacctagatacccatagggtatgaggaagggcactaaagttgttgcccacgaaggtac 19643641  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    | || ||||||||| || |||||||||| || ||||| ||||||   | ||||||||||| |||||||||||||||||    
T  19643642 gggcacgggtacgggtaatttttacaaatgcaggtatggagatgagcattatagtaccctacccattgggtacccatt 19643719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 92 - 270
Target Start/End: Complemental strand, 38020128 - 38019950
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||| || |||| || ||||||| ||||||||||||| |||||||||||||||  |||||| | ||||| |||||||| |||| |||||| |||||    
T  38020128 tcttttcagagttaaactgcgggtaatgggtgcgggtatggacacttaggtgcccatagggtatggggaagggcactaaagtagttgtccacgagggtac 38020029  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    | ||  | |||||  |||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||||    
T  38020028 gggcctgagtacgagtattttttacaaacgcgggtatggggatgggtactatagtaccctgcccattggatacccattg 38019950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 94 - 280
Target Start/End: Complemental strand, 1376263 - 1376077
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||  ||||| || || || |||||||||||||||||||||||||||     
T  1376263 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggtacccatagggtataaggaatgggactaaagttgttgcccacgaaggtacgg 1376164  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    || ||||||||  ||||||||| ||| || ||||||| ||  |  ||| ||||| ||| ||||||||||||||||| |||| |||||    
T  1376163 gcacgggtacgagtattttttataaatgcaggtatagggaccggcactgtagtatcctacccattgggtacccattatcatccctaa 1376077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 92 - 280
Target Start/End: Original strand, 24891446 - 24891635
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| ||||||| ||||||||||  ||||||||||| |||||  |||||| ||||||||||||||||||||| |||||| |||||    
T  24891446 tcttttcatagttaaagtgcgggtaatgggtgcgggtacaggcacttaggtacccatagggtatgggaaagggtactaaagttgttgtccacgacggtac 24891545  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggata-ctatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    |||| ||||||||  || |||||||||| |||||||| | |||||  |  | ||||||||| |||||| ||||||||||| ||| |||||    
T  24891546 gagcacgggtacgagtaatttttacaaatgcgggtatggggatgggcatttgtagtaccctacccattaggtacccattgccatccctaa 24891635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 94 - 270
Target Start/End: Original strand, 3616895 - 3617071
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| |||||| ||||||| |||||||| |||||  |||||| | ||||| |||||||||||||||||||| ||||||     
T  3616895 ttttcatagttaaagtgcgggtaataggtgcgagtatgggtacttaggtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgg 3616994  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    || ||||||||  ||||||||| ||| |||||||| | || ||  ||||||||||||| ||||||||| ||||||||    
T  3616995 gcacgggtacgagtattttttataaatgcgggtatggggacgggcactatagtaccctacccattgggcacccattg 3617071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 98 - 270
Target Start/End: Complemental strand, 24789586 - 24789414
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| ||||||||||||| |||||| || |||||  |||||||| ||||| ||||||||||||||||||||||||||| || |    
T  24789586 catagttaaagtgcgggtaatgggtgcgggtatggacacttaagtacccatagggtatgaggaaggggactaaagttgttgcccacgaaggtacgggcac 24789487  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    |||||||| ||||||||| ||| ||||||||   || ||  | | ||||||||| |||||| |||||||||||    
T  24789486 gggtacgggtattttttataaatgcgggtatgaggacgggcattgtagtaccctacccatttggtacccattg 24789414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 153 - 279
Target Start/End: Original strand, 39221636 - 39221762
Alignment:
Q  153 tatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctg 252  Q
    |||||||||||| ||||||||||||| |||||| |||||| ||||||||||    ||||||||||||| ||||||| | ||||| ||| |||||||||||    
T  39221636 tatgagaaagggcactaaagttgttgaccacgagggtacgggctcgggtacatgcattttttacaaacacgggtatggggatgggtacgatagtaccctg 39221735  T
Q  253 cccattgggtacccattgtcattccta 279  Q
    || ||||||||||||||||||||||||    
T  39221736 cctattgggtacccattgtcattccta 39221762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 92 - 280
Target Start/End: Original strand, 2472309 - 2472497
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||| |||| ||||||  |||| || | |||||||||||||||||| || |||||  |||||| | || || ||||||||||||| |||||| |||||    
T  2472309 tcttttaatagttaaagtacgggttatggatgcgggtatgggcacttatgtacccatagggtatggggaatggcactaaagttgttgtccacgagggtac 2472408  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    | || ||| || ||||| |||||||||| |||||||| |||||||  | | ||||||||| |||||||| ||||||||| ||| |||||    
T  2472409 gggcacggatatggataatttttacaaatgcgggtatggagatgggcattgtagtaccctacccattggatacccattgccatccctaa 2472497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 25500226 - 25500067
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||  |||||||  |||||| ||||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||| ||||||  ||||    
T  25500226 tcttttcatatttaaagtgcaggtaatgggtgcgggtatgggcacttaggtacccataaggtatggggaagggtactaaagttgttgtccacgacagtac 25500127  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccct 251  Q
    | || || |||||| || | |||||||| |||||| | | |||||  | |||||||||||    
T  25500126 gggcacgagtacgggtaatatttacaaatgcgggtttcgggatgggcattatagtaccct 25500067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 127 - 282
Target Start/End: Original strand, 37226836 - 37226991
Alignment:
Q  127 gtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggt 226  Q
    ||||||||||||||||||||||  |||||| | || |  |||||||||||| |||| || |||||  ||||||||||||  |||||||||||| ||||||    
T  37226836 gtatgggcacttaggtgcccatagggtatggggaatgacactaaagttgttacccaggagggtacaggctcgggtacgggcattttttacaaatgcgggt 37226935  T
Q  227 atagagatggatactatagtaccctgcccattgggtacccattgtcattcctaatt 282  Q
    || | || || |||| ||||||||| ||||||||||| |||||| ||| |||||||    
T  37226936 atggggaagggtactgtagtaccctacccattgggtatccattgccatccctaatt 37226991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 228
Target Start/End: Original strand, 2620988 - 2621125
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||||| ||||||| ||||||| ||||| ||||||||||||||| | |||||  |||||| | || || |||||||||||||||||||| ||||    
T  2620988 atcttttcatagttaaagtgcgggtaatgggtgcaggtatgggcacttagatacccatagggtatggggaatggcactaaagttgttgcccacgagggta 2621087  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtat 228  Q
    ||  | || |||||| || |||||| ||| ||||||||    
T  2621088 cggacacgagtacgggtaatttttaaaaatgcgggtat 2621125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 92 - 193
Target Start/End: Complemental strand, 6109702 - 6109601
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| ||||||| |||||||||||| |||||||||| |||||  |||||  |||| || |||||||||||||||||||||| |||    
T  6109702 tcttttcatagttaaagtgcgggtaatgggtgcgggtatgagcacttaggtacccatagggtattggaaaaggcactaaagttgttgcccacgaagatac 6109603  T
Q  192 ga 193  Q
    ||    
T  6109602 ga 6109601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 15961735 - 15961832
Alignment:
Q  127 gtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgg 224  Q
    |||||||||| |||||||||||    |||||| |||||||||||||||||| |||||||  ||||||||||||||||  |||||||||||||||||||    
T  15961735 gtatgggcacgtaggtgcccatagaatatgaggaagggtactaaagttgttacccacgagtgtacgagctcgggtacaaatattttttacaaacgcgg 15961832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 105 - 279
Target Start/End: Complemental strand, 28970901 - 28970727
Alignment:
Q  105 aaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacg 204  Q
    |||||| ||||| | ||||||||||||||||||||| |  |||| ||||||| | | ||| || ||| || |||||||| | |||| ||||||||||| |    
T  28970901 aaagtgcgggtattgggtgcgggtatgggcacttagatatccataaggtatggggacgggcaccaaacttattgcccacaagggtatgagctcgggtatg 28970802  T
Q  205 gatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |  ||||| |  ||||||  |||| |||||||  ||||| |||||||||||| ||||||||||||||||| ||||    
T  28970801 gggattttcttaaaacgcatgtatggagatgggcactatggtaccctgcccaatgggtacccattgtcatcccta 28970727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 25419347 - 25419247
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||||||  |||||| || ||| ||||||||||||| || |||||  |||||| ||||||||||||||||||||| |||||| |||||    
T  25419347 tcttttcatagttaaagtgcaggtaatgggagcgtgtatgggcacttaagtacccatagggtatgggaaagggtactaaagttgttgtccacgacggtac 25419248  T
Q  192 g 192  Q
    |    
T  25419247 g 25419247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 1667324 - 1667243
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacga 185  Q
    ||||||| || |||| ||||||||||||||||||||||| |||||  |||||| | ||||| ||||||||||||||||||||    
T  1667324 taaagtgaggttaatgggtgcgggtatgggcacttaggtacccatagggtatggggaagggcactaaagttgttgcccacga 1667243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 26561256 - 26561349
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacga 185  Q
    ||||||||||| ||||||| | ||||| |||| |||||||||||||||||| | |||  || ||| | ||||| ||||||||||||||||||||    
T  26561256 tcttttcatagttaaagtgcgtgtaatgggtgtgggtatgggcacttaggtactcatagggcatggggaagggcactaaagttgttgcccacga 26561349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 38546900 - 38546827
Alignment:
Q  208 attttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    ||||||||||||||||| ||| |||||||||||||||||||| | | ||||| |||||||||| ||| ||||||    
T  38546900 attttttacaaacgcggttatggagatggatactatagtaccatactcattgagtacccattgccatccctaat 38546827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 94 - 270
Target Start/End: Complemental strand, 7057683 - 7057507
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| | ||||| ||| || ||||| |||||||||| |||||  |||||| | ||||| || || ||||||| |||||| | ||||     
T  7057683 ttttcatagttaaagtgcgagtaatgggtacgagtatgtgcacttaggtacccatagggtatggggaagggcaccaaggttgttgtccacgaggatacgg 7057584  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    || ||  ||| | ||||||||||||| || | |||||||| ||  ||| ||||||||| ||||| | ||||||||||    
T  7057583 gcacgaatacaggtattttttacaaatgcagatatagagaagggcactgtagtaccctacccatagagtacccattg 7057507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 38551629 - 38551558
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacg 192  Q
    ||||||||||||||||||| ||||||||  |||||| | |||||  ||||||||||||||||||| ||||||    
T  38551629 gtgcgggtatgggcacttaagtgcccatagggtatggggaagggcgctaaagttgttgcccacgagggtacg 38551558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 34776834 - 34776936
Alignment:
Q  168 taaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtaccca 267  Q
    |||| ||||||||||| | |||| | | ||||||||||  ||||||||||||||||||||| | || ||  | |||||||||||||||||||||  ||||    
T  34776834 taaaattgttgcccacaagggtatgggttcgggtacgggcattttttacaaacgcgggtatcgggacgggcattatagtaccctgcccattgggagccca 34776933  T
Q  268 ttg 270  Q
    |||    
T  34776934 ttg 34776936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 43239188 - 43239126
Alignment:
Q  166 actaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtat 228  Q
    |||||||||||||||||||||| |||| |||||| ||||| || |||||||||||||| ||||    
T  43239188 actaaagttgttgcccacgaagatacgggctcggatacggctaatttttacaaacgcgagtat 43239126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 279
Target Start/End: Complemental strand, 30801327 - 30801140
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||||||||| |||| ||| ||||||||| ||||||||| |||||  |||||  | | ||| || || |||||||||| ||| |||||    
T  30801327 tcttttcatagttaaagtgtgg-taatgggtacgggtatggacacttaggtacccatagggtatagggatgggcaccaaggttgttgccctcgagggtac 30801229  T
Q  192 gagctcgggtacggatatttttt-acaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |  | | ||||||| |||||||| |||||  ||||||| |  | ||  |||||||||||||  | || |||||||||||||||| ||||    
T  30801228 ggacacaggtacgggtatttttttacaaatacgggtatgggaaagggcactatagtaccctatctatagggtacccattgtcatcccta 30801140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 15542202 - 15542116
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||  |||||| |||  |||||||||||||||||||||||| || |||||| ||||  |||||||||||| |||| || |||||    
T  15542202 taaagtgcaggtaatgggtatgggtatgggcacttaggtgcccataagatatgag-aaggacactaaagttgttacccatgagggtac 15542116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 4e-51; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 92 - 274
Target Start/End: Original strand, 1876071 - 1876253
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| || ||||||| |||||||||||||||||||||||||||||  |||||| | ||||| |||||||||||||||||||| |||||    
T  1876071 tcttttcatagttaaaatgcgggtaatgggtgcgggtatgggcacttaggtgcccatagggtatggggaagggcactaaagttgttgcccacgatggtac 1876170  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcat 274  Q
    | |  ||||||||  |||||||||||||||||||||| | ||||| ||| |||||||||| ||||||||||||||||||||||    
T  1876171 gggtccgggtacgagtattttttacaaacgcgggtatggggatgggtaccatagtacccttcccattgggtacccattgtcat 1876253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 92 - 281
Target Start/End: Original strand, 17172247 - 17172436
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||||||| ||||||||  |||||| | ||||| | |||||||||||||||||| |||||    
T  17172247 tcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccatagggtatggggaagggcattaaagttgttgcccacgagggtac 17172346  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    | ||||||||||||| |||||||||||| | |||||| | ||||||||||||||||||||  ||||||||||||||||| ||| ||||||    
T  17172347 gggctcgggtacggacattttttacaaatgagggtatggggatggatactatagtaccctatccattgggtacccattgccatccctaat 17172436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 92 - 280
Target Start/End: Original strand, 28067299 - 28067487
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||| | |||||||  |||||| ||||| |||||||||||||| || |||||  |||||||| || |  | ||||||||||| |||||| |||||    
T  28067299 tcttttcatggttaaagtgcaggtaatgggtgcaggtatgggcacttaagtacccatagggtatgaggaaagacattaaagttgttgtccacgagggtac 28067398  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    ||||||| |||||| |||||||||||||||||||||| | ||||| |||||| |||||||||||||||||||||||||| ||| |||||    
T  28067399 gagctcgagtacgggtattttttacaaacgcgggtatggggatgggtactattgtaccctgcccattgggtacccattgccatccctaa 28067487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 92 - 280
Target Start/End: Complemental strand, 44300799 - 44300611
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||  ||||| |||||||||||||| |||||||| || |||| | ||||| |||||||||||||||||||| |||||    
T  44300799 tcttttcatagagaaagtgcgggtaacgggtgcaggtatgggcacttaagtgcccataagatatggggaagggcactaaagttgttgcccacgagggtac 44300700  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    | ||||||||||||| |||||||||||| | |  ||| | ||||| ||||||||||||||  ||||||||||||||||| ||| |||||    
T  44300699 gggctcgggtacggacattttttacaaatgagcttatggggatgggtactatagtaccctatccattgggtacccattgccatccctaa 44300611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 104 - 279
Target Start/End: Original strand, 36074164 - 36074339
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||  |||||| | ||||| |||||||||||| |||||||||||||| || || ||||    
T  36074164 taaagtgcgggtaatgggtacgggtatgggcacttaggtgcccatagggtatggggaagggcactaaagttgttacccacgaaggtacgggcacgagtac 36074263  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||  | ||||||||||||| ||||||| |||| ||||||||||||||| |||||||| ||||||||| ||| ||||    
T  36074264 gggcaatttttacaaacgcaggtatagggatgaatactatagtaccctacccattggatacccattgccatcccta 36074339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 91 - 269
Target Start/End: Complemental strand, 26299240 - 26299062
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    ||||||||||   ||||||| || |||||||||||||||||| |||||| ||||||||  |||||| | ||||| || |||||||||| |||||| ||||    
T  26299240 atcttttcatgactaaagtgcggataattggtgcgggtatggacacttaagtgcccatagggtatggggaagggcaccaaagttgttgtccacgagggta 26299141  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    || || || ||||||  |||||||||||||||| |||| |||||||||||||||||||||| ||||||| |||||||||    
T  26299140 cgggcacgagtacgggcattttttacaaacgcgagtatggagatggatactatagtaccctacccattgagtacccatt 26299062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 279
Target Start/End: Original strand, 9355220 - 9355377
Alignment:
Q  122 tgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacg 221  Q
    |||||||||| ||||||| ||||||||  |||||||| ||||  |||||||||||||||||||| |||||| || || |||||  |||||||||||||||    
T  9355220 tgcgggtatgagcacttaagtgcccatagggtatgaggaaggacactaaagttgttgcccacgagggtacgggcacgtgtacgagtattttttacaaacg 9355319  T
Q  222 cgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
     ||||||   |||||||||||||||||||| |||||||||||||||||||||| ||||    
T  9355320 tgggtatgaggatggatactatagtaccctacccattgggtacccattgtcatcccta 9355377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 94 - 295
Target Start/End: Original strand, 40789561 - 40789762
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    |||||||||| |||||| |||||||  ||||||||||||||||||| ||||||||  |||||| ||||||| ||||||||||||| |||||| ||||||     
T  40789561 ttttcatagagaaagtgcgggtaatgagtgcgggtatgggcacttaagtgcccatagggtatgggaaagggcactaaagttgttgtccacgagggtacgg 40789660  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaattgtatccaagtt 293  Q
    | |||||||| || |||||||||||| | |||||| | ||||| ||||||| ||||||  | ||||||||||||||  ||| ||||||| || ||| |||    
T  40789661 gttcgggtacagacattttttacaaatgagggtatggggatgggtactataataccctatctattgggtacccattaccatccctaattttagccatgtt 40789760  T
Q  294 tt 295  Q
    ||    
T  40789761 tt 40789762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 104 - 259
Target Start/End: Complemental strand, 33978899 - 33978744
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| || |||| |||||||||||||||||||| ||||||||  |||||| | ||||| ||||||| |||||||||||| |||||| || |||||||    
T  33978899 taaagtgcggataatgggtgcgggtatgggcacttatgtgcccatacggtatggggaagggcactaaaggtgttgcccacgagggtacgggcacgggtac 33978800  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    ||| ||||||| ||||||||||||| || || |||||||||||||||| |||||||    
T  33978799 ggacattttttgcaaacgcgggtatggaaatcgatactatagtaccctacccattg 33978744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 98 - 280
Target Start/End: Complemental strand, 46181293 - 46181111
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| ||||| || |||||  |||||| | ||||| |||||||||||||||||||| |||||| || |    
T  46181293 catagttaaagtgcgggtaatgggtgcgggtatgggtacttaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgggcac 46181194  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    |||||||||||||||||| ||| |||||||| | || ||  | | ||||||||| |||||||||||||||||| ||| |||||    
T  46181193 gggtacggatattttttataaatgcgggtatggggacgggcattgtagtaccctacccattgggtacccattgccatccctaa 46181111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 92 - 282
Target Start/End: Original strand, 48558712 - 48558902
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||| | ||||||| ||||||| | ||||| ||||| |||||| ||| ||||  |||||| | ||||| |||||||||||||||||||| |||||    
T  48558712 tcttttcatggttaaagtgcgggtaatggatgcggatatggacacttaagtggccatagggtatggggaagggcactaaagttgttgcccacgagggtac 48558811  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaatt 282  Q
    | || | |||||  | |||||||||||| |||||||| | ||||| |||||||||||| |||||||||| ||||||||||||| |||||||    
T  48558812 gggcacaggtactaacattttttacaaatgcgggtatggggatgggtactatagtaccgtgcccattggatacccattgtcatccctaatt 48558902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 98 - 279
Target Start/End: Complemental strand, 16567647 - 16567466
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| ||||| || |||||  |||||| | ||||| |||||||||||||||||||| |||||| || |    
T  16567647 catagttaaagtgcgggtaatgggtgcgggtatgggtacttaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgggcac 16567548  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||||||||||||| ||| |||||||| | || ||  | | ||||||||| |||||||||||||||||| ||| ||||    
T  16567547 gggtacggatattttttataaatgcgggtatggggacgggcattgtagtaccctacccattgggtacccattgccatcccta 16567466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 98 - 279
Target Start/End: Original strand, 16598015 - 16598196
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| ||||| || |||||  |||||| | ||||| |||||||||||||||||||| |||||| || |    
T  16598015 catagttaaagtgcgggtaatgggtgcgggtatgggtacttaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgggcac 16598114  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||||||||||||| ||| |||||||| | || ||  | | ||||||||| |||||||||||||||||| ||| ||||    
T  16598115 gggtacggatattttttataaatgcgggtatggggacgggcattgtagtaccctacccattgggtacccattgccatcccta 16598196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 94 - 279
Target Start/End: Complemental strand, 19805122 - 19804937
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| |||||||||||| |||||||||| |||||  |||||| | ||||| |||||||||||| ||||||| ||||||     
T  19805122 ttttcatagttaaagtgcgggtaatgggtgcgggtatgagcacttaggtacccatagggtatggggaaggggactaaagttgttacccacgagggtacgg 19805023  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || ||||||||| ||||||||| ||| ||||||||   || ||  ||| ||||||||| |||||||||||||||||| ||| ||||    
T  19805022 gcacgggtacgggtattttttataaatgcgggtatgaggacgggcactgtagtaccctacccattgggtacccattgccatcccta 19804937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 104 - 268
Target Start/End: Original strand, 38469959 - 38470123
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||| |||||| | |||||||||||| ||||||||||||| | ||||  |||||||||    
T  38469959 taaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccattgggtatggggaagggtactaaaattgttgcccacgaggatacggactcgggtac 38470058  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccat 268  Q
      | |||||||||||||||| |||| | ||||| ||  |||||||||||| |||||| |||||||    
T  38470059 aaacattttttacaaacgcgagtatggggatgggtatcatagtaccctgctcattggatacccat 38470123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 94 - 279
Target Start/End: Original strand, 10066289 - 10066474
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||| || ||  |||||| | ||||| |||||||||||||||||||| ||||||     
T  10066289 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggtacctatagggtatggggaaggggactaaagttgttgcccacgagggtacgg 10066388  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
     | ||||||| | ||||||||| ||| |||||||||| || |   ||| ||||||| | |||||||||| ||||||||||| ||||    
T  10066389 acacgggtacaggtattttttataaatgcgggtatagggacgcgcactgtagtaccatacccattgggtgcccattgtcatcccta 10066474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 9223699 - 9223551
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    |||||||||||| |||||| ||||||||  |||||| | || | ||||||||||||||||||||| |||||| || | |||||||  |||||||||||||    
T  9223699 gtgcgggtatggacacttaagtgcccatagggtatggggaatgatactaaagttgttgcccacgagggtacgggcacaggtacgggcattttttacaaac 9223600  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    | |||||| | ||||||||| |||||||||| |||||||||||||||||    
T  9223599 gtgggtatggggatggatacaatagtaccctacccattgggtacccatt 9223551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 270
Target Start/End: Complemental strand, 27398664 - 27398488
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||  ||||  |||||| | ||||| |||||||||||||||||||| ||||||     
T  27398664 ttttcatagttaaagtgtgggtaatgggtgcgggtatgggcacttaagtatccatagggtatggggaaggggactaaagttgttgcccacgagggtacgg 27398565  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    || |||||| || ||||||||| |||  ||||||| | || ||  | | |||||||||  |||||||| ||||||||    
T  27398564 gcacgggtatgggtattttttataaatacgggtatggggacgggcattgtagtaccctatccattgggcacccattg 27398488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 40342344 - 40342531
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| || ||||||| | || ||||||||||||||||||||| ||  |||||| | ||||| |||||||||||||||||||| || |     
T  40342344 tcttttcatagttaaaatgcgggtaatggatgggggtatgggcacttaggtgcctatagggtatggggaagggcactaaagttgttgcccacgagggaat 40342443  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtat-agagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | | |||||| ||  ||||||||||||||||| |||| ||| |||| |||||||||||||| |||||||| ||| ||||| ||| ||||    
T  40342444 gggttcgggtccgagtattttttacaaacgcgtgtatgaga-atgggtactatagtaccctacccattggatactcattgccatcccta 40342531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 106 - 240
Target Start/End: Original strand, 34152399 - 34152533
Alignment:
Q  106 aagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacgg 205  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||  |||||| | ||||| ||||||||| |||||||||| |||||   | ||||||| |    
T  34152399 aagtgtgggtaatgggtgcgggtatgggcacttaagtgtccatagggtatggggaagggcactaaagttattgcccacgagggtacagacacgggtacag 34152498  T
Q  206 atattttttacaaacgcgggtatagagatggatac 240  Q
    | |||||| |||||||||||||| | |||||||||    
T  34152499 acatttttaacaaacgcgggtatggggatggatac 34152533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 106 - 240
Target Start/End: Complemental strand, 34174725 - 34174591
Alignment:
Q  106 aagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacgg 205  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||  |||||| | ||||| ||||||||| |||||||||| |||||   | ||||||| |    
T  34174725 aagtgtgggtaatgggtgcgggtatgggcacttaagtgtccatagggtatggggaagggcactaaagttattgcccacgagggtacagacacgggtacag 34174626  T
Q  206 atattttttacaaacgcgggtatagagatggatac 240  Q
    | |||||| |||||||||||||| | |||||||||    
T  34174625 acatttttaacaaacgcgggtatggggatggatac 34174591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 92 - 190
Target Start/End: Complemental strand, 36072691 - 36072593
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||| || |||| || |||||||||||||||||||||||||||||||||||||  |||||| | ||||| |||||||||||||||||||| ||||    
T  36072691 tcttttcagagttaaattgcgggtaattggtgcgggtatgggcacttaggtgcccatagggtatggggaagggcactaaagttgttgcccacgagggta 36072593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 92 - 270
Target Start/End: Original strand, 5924098 - 5924264
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| ||||||| ||||| ||||||| ||||||||||||||   |||||| | ||||| |||||||||||| |||||||          
T  5924098 tcttttcatagttaaagtgcgggtaatgggtgcaggtatggacacttaggtgcccacagggtatggggaagggcactaaagttgttacccacga------ 5924191  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
          |||||||| |||||||||||||||||| ||| | ||||| ||||||| |||||| || |||||||||||||||    
T  5924192 ------gggtacgggtattttttacaaacgcggatatggggatgggtactataataccctacctattgggtacccattg 5924264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 121 - 280
Target Start/End: Complemental strand, 9477716 - 9477557
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    |||||||||||||||||||||| |||||  || ||| ||||||| | |||||||||||||||||| ||||||  | |  ||||||||| ||||||||||     
T  9477716 gtgcgggtatgggcacttaggtacccatagggcatgggaaagggcattaaagttgttgcccacgagggtacggacacaagtacggataatttttacaaat 9477617  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    | |||||| | ||||   | | ||||||||| || ||||||||||||||||||| |||||    
T  9477616 gagggtatggggatgagcattgtagtaccctaccgattgggtacccattgtcatccctaa 9477557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 94 - 279
Target Start/End: Original strand, 5023222 - 5023405
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||  ||| ||| ||||||||||||||||||||||| |||||  |||||| | ||||  |||||||||||||||||||  | || |     
T  5023222 ttttcatagttaaagtacgggcaatgggtgcgggtatgggcacttaggtacccatagggtatg-ggaaggagactaaagttgttgcccacg-ggataagg 5023319  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || || |||||| ||||||||| ||| |||||||| | || ||  ||| ||||||||| |||||||||||||||||| ||| ||||    
T  5023320 gcacgagtacgggtattttttataaatgcgggtatggggacgggcactgtagtaccctacccattgggtacccattgccatcccta 5023405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 276
Target Start/End: Complemental strand, 2960018 - 2959849
Alignment:
Q  95 tttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgag 194  Q
    |||||||| ||||||| ||||||| | || |||||||| |||||||||||||||  || ||| | ||||| ||||||||| ||||||||||             
T  2960018 tttcatagttaaagtgcgggtaatagatgtgggtatggacacttaggtgcccatacggaatggggaagggcactaaagttattgcccacga--------- 2959928  T
Q  195 ctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattc 276  Q
       || |||||| ||||||||||||  ||||||||| ||||| |||||||||||||| | |||||||||||||||| |||||    
T  2959927 ---ggatacggacattttttacaaatacgggtatagggatgggtactatagtaccctactcattgggtacccattgccattc 2959849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 279
Target Start/End: Complemental strand, 31454982 - 31454797
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| |||| |||||||| |||||| || |||||| |||||| ||||||  ||||||||||||||||||||   ||||     
T  31454982 ttttcatagttaaagtgcgggtaatgggtgtgggtatggacacttaagtacccattgggtatgggaaaggagactaaagttgttgcccacgagaatacgg 31454883  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||  | |||||  ||||||||| ||| |||| ||| | || ||| | | ||||||||| | |||||| ||||||||| ||| ||||    
T  31454882 gcatgagtacgagtattttttataaatgcggatatggggacggacattgtagtaccctactcattggatacccattgccatcccta 31454797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 43702442 - 43702543
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| ||||||| | ||||||||||||||||||||| |||||  |||||| | ||| | |||||||||||| ||||||| |||||    
T  43702442 tcttttcatagttaaagtgcgggtaatggatgcgggtatgggcacttaggtacccatagggtatggggaagagcactaaagttgttacccacgagggtac 43702541  T
Q  192 ga 193  Q
    ||    
T  43702542 ga 43702543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 285
Target Start/End: Original strand, 25309609 - 25309734
Alignment:
Q  160 aagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    ||||| ||||||||||||||| |||| |||||| | |||| ||||  |||||||||||||||||||||| ||||  |  ||| ||||||| | ||||| |    
T  25309609 aagggcactaaagttgttgcctacgagggtacgggttcggatacgtgtattttttacaaacgcgggtatggagaatggcactgtagtaccttacccatag 25309708  T
Q  260 ggtacccattgtcattcctaattgta 285  Q
    ||||||||||| ||| ||||| ||||    
T  25309709 ggtacccattgccatccctaagtgta 25309734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 270
Target Start/End: Complemental strand, 39414635 - 39414486
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    ||||||||||||| |||||  | |||||  |||||| | ||||| || | |||||||||||||||||||||| || ||||||||| ||||||||| |||     
T  39414635 gtgcgggtatgggtacttaaatacccatagggtatggggaaggggaccatagttgttgcccacgaaggtacgggcacgggtacgggtattttttataaat 39414536  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    |||||||| |  | ||  | | |||||||||  |||||||||||||||||    
T  39414535 gcgggtatgggaacgggcattgtagtaccctatccattgggtacccattg 39414486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 43224402 - 43224305
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||| ||||||| ||||||| ||||| ||||||||||||||| | |||||  |||||| | ||||| ||||||||||||| |||||| |||||    
T  43224402 ttttcatagttaaagtgcgggtaatgggtgcaggtatgggcacttagatacccatagggtatggggaagggcactaaagttgttgtccacgagggtac 43224305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 270
Target Start/End: Complemental strand, 45112260 - 45112120
Alignment:
Q  112 gggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattt 211  Q
    ||||||| |||||||||||| ||||||||||||||||  ||||||   ||||| ||||||||| ||||||||||            ||||||||||||||    
T  45112260 gggtaatgggtgcgggtatgagcacttaggtgcccatagggtatggagaagggcactaaagttattgcccacga------------gggtacggatattt 45112173  T
Q  212 tttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    |||      |||||||||| || || |||||||||||||||||||||| ||||||||||    
T  45112172 ttt------gcgggtatagggaggggtactatagtaccctgcccattgagtacccattg 45112120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 30391634 - 30391542
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacga 185  Q
    ||||||||| | ||||||| || |||| | |||||||||||||||||| ||||||| |||| | | ||||||| ||||||||||||||||||||    
T  30391634 tcttttcatggttaaagtgcggataatggatgcgggtatgggcacttaagtgccca-tagggaagggaaagggcactaaagttgttgcccacga 30391542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 279
Target Start/End: Complemental strand, 36072594 - 36072522
Alignment:
Q  207 tattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||| |||| ||| |||||| ||| ||||    
T  36072594 tattttttacaaacgcgggtatggggatggatactatagtatcctgcctattgagtatccattgccatcccta 36072522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 270
Target Start/End: Complemental strand, 11244110 - 11243932
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| ||| | |||| |||||||||||||| |||||||| |||||  | |||| | ||||| ||||||||||||| |||||| | ||     
T  11244110 tcttttcatagttaaaatgttgataatgggtgcgggtatgggtacttaggtacccataggatatggggaagggcactaaagttgttg-ccacgaggataa 11244012  T
Q  192 gagctcgggtacggata-ttttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    | |||| | || ||  | ||||||||||| |||||||| | || || ||| |||||| ||| ||| ||||||||||||||    
T  11244011 gggctcagatatggccatttttttacaaatgcgggtatggggaagggtacaatagtatcctaccctttgggtacccattg 11243932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 46783133 - 46783062
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacg 192  Q
    |||||||||||||||||||||| |||||  ||||||   ||||| |||||||||||||||||||| ||||||    
T  46783133 gtgcgggtatgggcacttaggtacccatagggtatggagaaggggactaaagttgttgcccacgagggtacg 46783062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 16560919 - 16560793
Alignment:
Q  133 gcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagag 232  Q
    ||||||| ||||||||  |||||| | ||||  ||||||||||||| || ||| ||||||  | |||||||    ||| |||||||| |||||||| |||    
T  16560919 gcacttaagtgcccatagggtatggggaaggacactaaagttgttgtccgcgagggtacggacacgggtactagcattatttacaaatgcgggtatggag 16560820  T
Q  233 atggatactatagtaccctgcccattg 259  Q
    |||||| |||||||||||| |||||||    
T  16560819 atggatgctatagtaccctacccattg 16560793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 16604743 - 16604869
Alignment:
Q  133 gcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagag 232  Q
    ||||||| ||||||||  |||||| | ||||  ||||||||||||| || ||| ||||||  | |||||||    ||| |||||||| |||||||| |||    
T  16604743 gcacttaagtgcccatagggtatggggaaggacactaaagttgttgtccgcgagggtacggacacgggtactagcattatttacaaatgcgggtatggag 16604842  T
Q  233 atggatactatagtaccctgcccattg 259  Q
    |||||| |||||||||||| |||||||    
T  16604843 atggatgctatagtaccctacccattg 16604869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 279
Target Start/End: Original strand, 33067525 - 33067683
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    |||||||||||||||||||||| |||||   ||||| | ||||  |||||||||||||||||||| |||| | ||  || ||||| || ||||||||||     
T  33067525 gtgcgggtatgggcacttaggtacccatagagtatggggaaggacactaaagttgttgcccacgagggtatgggcatggatacgggtaatttttacaaat 33067624  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | ||||||  |||| |  | | |||||||||  ||||| ||||||||||| ||| ||||    
T  33067625 gtgggtatgaagataggcattgtagtaccctatccatttggtacccattgccatcccta 33067683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 12499697 - 12499758
Alignment:
Q  208 attttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    ||||||||||||||| ||||| | ||||||||||||||||| || || ||||||||||||||    
T  12499697 attttttacaaacgcaggtatggggatggatactatagtactctaccaattgggtacccatt 12499758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 92 - 276
Target Start/End: Original strand, 3551561 - 3551745
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||||||||||| | | ||||||||| ||||||||| | |||  |||||  | | ||| || || ||||||| |||||||| |||    
T  3551561 tcttttcatagttaaagtgtgggtaatggatacgggtatggacacttaggtactcatagggtatagggatgggcaccaaggttgttgtccacgaagatac 3551660  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattc 276  Q
      ||  |||||| | |||||||||||||  |||||||   || || |||| ||||||||| |  || |||||||||||| |||||    
T  3551661 aggcatgggtacaggtattttttacaaatacgggtatgaggaagggtactgtagtaccctacttatagggtacccattgccattc 3551745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 31330996 - 31331100
Alignment:
Q  125 gggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatat-tttttacaaacgcg 223  Q
    ||||||| ||||||||||| | |  ||||||  ||||||||| ||||| |||||||||| ||| |||||| | |||||| ||||| |||||||||| |||    
T  31330996 gggtatgtgcacttaggtgtctagaaggtatatgaaagggtattaaagatgttgcccacaaagatacgagtttgggtacagatatatttttacaaatgcg 31331095  T
Q  224 ggtat 228  Q
    |||||    
T  31331096 ggtat 31331100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 215
Target Start/End: Complemental strand, 42284591 - 42284468
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||||||||| |||| |||||| ||||| ||| |||| | |||||  | |||| | ||| | ||||||||||||||||||||  ||||    
T  42284591 tcttttcatagttaaagtgtggataatgggtgcgagtatgtgcatttagatacccatatgatatggggaagagcactaaagttgttgcccacgagagtac 42284492  T
Q  192 gagctcgggtacggatatttttta 215  Q
    | || || |||| |||| ||||||    
T  42284491 gggcacgagtacagataattttta 42284468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 270
Target Start/End: Complemental strand, 3363040 - 3362863
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| | ||||||||||| || | || | |||||  | |||| | ||||| ||||||||||||| |||||| ||||| |    
T  3363040 ttttcatagttaaagtgcgggtaatggatgcgggtatggacattgagatacccatatgatatggggaaggggactaaagttgttgtccacgagggtacca 3362941  T
Q  194 gctcgggtacggata-ttttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    ||   | ||||| || ||||||| |||  ||||||| |||| ||| ||| ||||||| |  |||||||||| ||||||    
T  3362940 gcatagatacgggtatttttttataaatacgggtatggagacggacactgtagtaccttatccattgggtaaccattg 3362863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 30738662 - 30738718
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccat 148  Q
    ||||||||||| |||||||  |||||| |||| |||||||||||||||||| |||||    
T  30738662 tcttttcatagttaaagtgcaggtaatgggtgtgggtatgggcacttaggtacccat 30738718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 92 - 279
Target Start/End: Complemental strand, 11034785 - 11034598
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||| || |||| || || |||| |||||||||||||||||||||||||||||  |||||| | ||||| |||||||||||||||||||| |||||    
T  11034785 tcttttcagagttaaactgcggataatgggtgcgggtatgggcacttaggtgcccatagggtatggggaagggcactaaagttgttgcccacgagggtac 11034686  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | |  ||||||||| |||||||||||||||| ||||| | ||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  11034685 gggtccgggtacgggtattttttacaaacgcaggtatggggatgggtactatagtaccctgcccattgggtacccattgccatcccta 11034598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 92 - 282
Target Start/End: Original strand, 29405894 - 29406084
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| || |||| ||||| |||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||| |||||    
T  29405894 tcttttcatagagaaagtgcggataatgggtgcaggtatgggcacttaggtgcccatagagtatggggaagggcactaaagttgttgcccacgagggtac 29405993  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaatt 282  Q
    |||||||||||||   |||||||||||| | |||||| | ||||| ||||||||||||||  ||||||||||||||||||||| |||||||    
T  29405994 gagctcgggtacgagcattttttacaaatgagggtatggggatgggtactatagtaccctatccattgggtacccattgtcatccctaatt 29406084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 92 - 279
Target Start/End: Complemental strand, 53140700 - 53140513
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||||||| ||||||||  |||||| | ||||| | |||||||||||||||||| |||||    
T  53140700 tcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccatagggtatggggaagggcattaaagttgttgcccacgagggtac 53140601  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | ||||||||||||| |||||||||||| | |||||| | ||||||||||||||||||||  ||||||||||||||||| ||| ||||    
T  53140600 gggctcgggtacggacattttttacaaatgagggtatggggatggatactatagtaccctatccattgggtacccattgccatcccta 53140513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 92 - 281
Target Start/End: Original strand, 52802286 - 52802476
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||||||| ||||||||  |||||| | ||||| | |||||||||||||||||| |||||    
T  52802286 tcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccatagggtatggggaagggcattaaagttgttgcccacgagggtac 52802385  T
Q  192 gagctcgggtacggata-ttttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    | ||||||||||||| | ||||||||||| | |||||| | ||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  52802386 gggctcgggtacggacatttttttacaaatgagggtatggggatggatactatagtaccctgtccattgggtacccattgccatccctaat 52802476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 94 - 279
Target Start/End: Original strand, 2721256 - 2721441
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| | |||||||||||||||| |||| |||||  |||||| | ||||| |||||||||||||||||||| |||| |     
T  2721256 ttttcatagttaaagtgcgggtaatggatgcgggtatgggcactgaggtacccatagggtatggggaaggggactaaagttgttgcccacgagggtatgg 2721355  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || ||| ||| || ||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||| ||| ||||    
T  2721356 gcacggatacagacattttttacaaacgcgggtatggagatggatactgtagtaccctatccattgggtacccattgccatcccta 2721441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 94 - 280
Target Start/End: Original strand, 1758003 - 1758189
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||  ||||||| ||||||| ||||||||||||||||||||||| |||||  |||||| | |||||  ||||||||||||||||||||||||||     
T  1758003 ttttcataactaaagtgcgggtaatgggtgcgggtatgggcacttaggtacccatagggtatggggaagggccctaaagttgttgcccacgaaggtacgg 1758102  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    || |||||| ||  |||| ||||||| | |||||| |||||||  ||||||||||||| |||||||| ||||||||||||| |||||    
T  1758103 gcacgggtatgggcatttcttacaaatgtgggtatggagatgggcactatagtaccctacccattggatacccattgtcatccctaa 1758189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 92 - 270
Target Start/End: Complemental strand, 45097651 - 45097473
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| ||||||||||| |||||||||||||||||  ||||||   ||||| |||||||||||||||||||| |||||    
T  45097651 tcttttcatagagaaagtgcgggtaatgggtgcgggtataggcacttaggtgcccatagggtatggagaagggcactaaagttgttgcccacgagggtac 45097552  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    | ||||||||||    |||||||||||| | |||||| | ||||| ||||||||||||||  |||||||||||||||||    
T  45097551 gggctcgggtaccagcattttttacaaatgagggtatggggatgggtactatagtaccctatccattgggtacccattg 45097473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 91 - 228
Target Start/End: Original strand, 22306823 - 22306960
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||||| |||| || ||||||||||||||||||||||||| || |||||||| ||||||||| ||||| |||||||||||||||||||| ||||    
T  22306823 atcttttcatagttaaaatgcgggtaattggtgcgggtatgggcacctaagtgcccataaggtatgaggaagggcactaaagttgttgcccacgagggta 22306922  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtat 228  Q
    || | |||  ||||||||||||||||||||||||||||    
T  22306923 cgggttcgaatacggatattttttacaaacgcgggtat 22306960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 91 - 270
Target Start/End: Original strand, 28234193 - 28234371
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||| ||| | ||||||| ||||||| |||||||||||||||||| || |||||||  |||||  | ||||| ||||||||||||| |||||| ||||    
T  28234193 atctttccatggctaaagtgcgggtaatgggtgcgggtatgggcactaag-tgcccatagggtattgggaagggcactaaagttgttgtccacgagggta 28234291  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    || || |||||||||| |||||||||||| |||||||| | ||||||||||||||||||||  |||||||||||||||||    
T  28234292 cgggcacgggtacggacattttttacaaatgcgggtatggggatggatactatagtaccctatccattgggtacccattg 28234371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 98 - 285
Target Start/End: Original strand, 52180805 - 52180992
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| || || || |||||  |||||| | ||||| |||||||||||||||||||| |||||| || |    
T  52180805 catagttaaagtgcgggtaatgggtgcgggtatgggtacctaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgggcac 52180904  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaattgta 285  Q
    |||||||||||||||||| ||| |||||||| | || ||| | | ||||||||| |||||||||||||||||| ||| ||||||||||    
T  52180905 gggtacggatattttttataaatgcgggtatggggacggacattgtagtaccctacccattgggtacccattgccatccctaattgta 52180992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 94 - 280
Target Start/End: Complemental strand, 22829825 - 22829651
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| |||| || ||||||| |||||||||||||||||||||||||||||  |||||| | ||||| ||||||||||||||||||||            
T  22829825 ttttcatagttaaaatgcgggtaatgggtgcgggtatgggcacttaggtgcccatagggtatggggaagggcactaaagttgttgcccacga-------- 22829734  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
        |||||||| |||||||||||||||||||||| | ||||| |||||||||||||| |||||||||||||||||| ||| |||||    
T  22829733 ----gggtacgggtattttttacaaacgcgggtatggggatgggtactatagtaccctacccattgggtacccattgccatccctaa 22829651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 94 - 270
Target Start/End: Complemental strand, 12185866 - 12185690
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| | |||||||||||||||| |||| |||||  |||||| | ||||| |||||||||||||||||||| ||||||     
T  12185866 ttttcatagttaaagtgcgggtaatggatgcgggtatgggcactgaggtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgg 12185767  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    || ||||||||| ||||||||| ||| |||||||| | || ||  ||| ||||||||| ||||||||||||||||||    
T  12185766 gcacgggtacgggtattttttataaatgcgggtatggggacgggcactgtagtaccctacccattgggtacccattg 12185690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 94 - 270
Target Start/End: Complemental strand, 12187858 - 12187682
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| | |||||||||||||||| |||| |||||  |||||| | ||||| |||||||||||||||||||| ||||||     
T  12187858 ttttcatagttaaagtgcgggtaatggatgcgggtatgggcactgaggtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgg 12187759  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    || ||||||||| ||||||||| ||| |||||||| | || ||  ||| ||||||||| ||||||||||||||||||    
T  12187758 gcacgggtacgggtattttttataaatgcgggtatggggacgggcactgtagtaccctacccattgggtacccattg 12187682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 3387237 - 3387424
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||| || |||||  |||||| | ||| | |||||||||||||||||||| |||||    
T  3387237 tcttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaagtacccatagggtatggggaagaggactaaagttgttgcccacgagggtac 3387336  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | || ||||||||| ||||||||| ||| |||||||| | || ||  | | ||||||||| |||||||||||||||||| ||| ||||    
T  3387337 gggcacgggtacgggtattttttataaatgcgggtatggggacgggcattgtagtaccctacccattgggtacccattgccatcccta 3387424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 98 - 279
Target Start/End: Original strand, 32655549 - 32655730
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| || || || |||||  |||||| | ||||| |||||||||||||||||||| |||||| || |    
T  32655549 catagttaaagtgcgggtaatgggtgcgggtatgggtacctaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgggcac 32655648  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||||||||||||| ||| |||||||| | || ||| | | ||||||||| |||||||||||||||||| ||| ||||    
T  32655649 gggtacggatattttttataaatgcgggtatggggacggacattgtagtaccctacccattgggtacccattgccatcccta 32655730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 91 - 285
Target Start/End: Complemental strand, 31786504 - 31786316
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||||| |||| || ||||||| ||||||||||| | |||||||||||||||  |||||| ||||||  ||||||||| |||||||| | ||||    
T  31786504 atcttttcatagttaaaatgcgggtaatgggtgcgggtatagacacttaggtgcccatagggtatgggaaaggacactaaagtttttgcccacaagggta 31786405  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaattgta 285  Q
    ||      ||| ||| ||||||||||||||||||||||   |||| ||||||||||||||| |||||||| ||||||||||||| ||||| ||||    
T  31786404 cg------ggtccgggtattttttacaaacgcgggtatgaggatgaatactatagtaccctacccattggatacccattgtcatccctaactgta 31786316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 98 - 279
Target Start/End: Original strand, 42053295 - 42053476
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| ||||| || ||||   |||||| | ||||| |||||||||||||||||||| |||||| || |    
T  42053295 catagttaaagtgcgggtaatgggtgcgggtatgggtacttaagtacccacagggtatggggaaggggactaaagttgttgcccacgagggtacgggcac 42053394  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||||||||||||| ||| |||||||| | || ||  | | ||||||||| |||||||||||||||||| ||| ||||    
T  42053395 gggtacggatattttttataaatgcgggtatggggacgggcattgtagtaccctacccattgggtacccattgccatcccta 42053476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 91 - 269
Target Start/End: Complemental strand, 39804360 - 39804183
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||| ||||| ||||||| ||||||| |||||||||||||| ||||| || |||||  |||||| | ||||| |||||| | ||||||||||||||||    
T  39804360 atctttccatagctaaagtgcgggtaatgggtgcgggtatgggtacttaagtacccatagggtatggggaagggcactaaact-gttgcccacgaaggta 39804262  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    || || ||| ||||   |||||||||||| |||||||| | |||||||||||||||||||| |||||||  ||||||||    
T  39804261 cgtgcacggatacgagcattttttacaaatgcgggtatggggatggatactatagtaccctacccattgtatacccatt 39804183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 94 - 280
Target Start/End: Complemental strand, 42755428 - 42755242
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| |||||||||||| ||||||||||  ||||  |||||| | ||||| |||||||||||| ||||||| ||||||     
T  42755428 ttttcatagttaaagtgcgggtaatgggtgcgggtatgtgcacttaggtatccatagggtatggggaaggggactaaagttgttacccacgagggtacgg 42755329  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    || ||||||||| ||||||||| ||| | |||||| | || ||  | | ||||||||| |||||||||||||||||| ||| |||||    
T  42755328 gcacgggtacgggtattttttataaatgagggtatggggacgggcagtgtagtaccctacccattgggtacccattgccatccctaa 42755242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 98 - 279
Target Start/End: Original strand, 29149043 - 29149224
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| ||||| || |||||  |||||| | ||||| |||||||||||||||||||| |||||| || |    
T  29149043 catagttaaagtgcgggtaatgggtgcgggtatgggtacttaagtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgggcac 29149142  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
     ||||||||||||||||| ||| |||||||| | || ||  | | |||||||||  ||||||||||||||||| ||| ||||    
T  29149143 tggtacggatattttttataaatgcgggtatggggacgggcattgtagtaccctatccattgggtacccattgccatcccta 29149224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 91 - 259
Target Start/End: Original strand, 8805946 - 8806113
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||| ||| | ||||||| ||||||| |||||||||||||||||||| ||||||||  | |||||| ||||| |||||||||||| ||||||| ||||    
T  8805946 atctttccatggctaaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccataggttatgaggaagggcactaaagttgttacccacgagggta 8806045  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    || |  |||||||||  ||||||||||||||||||||| | |||| || |||||| ||||| |||||||    
T  8806046 cgggtacgggtacgggcattttttacaaacgcgggtatggggatgaat-ctatagcaccctacccattg 8806113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 94 - 280
Target Start/End: Complemental strand, 21075917 - 21075731
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| | ||||||||||||||||||||| |||||  |||||| | ||||| ||||||  |||||||||||| ||||||     
T  21075917 ttttcatagttaaagtgcgggtaatggatgcgggtatgggcacttaggtacccatagggtatggggaaggggactaaaaatgttgcccacgagggtacgg 21075818  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    || |||||||   ||||||||| ||| |||||||| | || ||  ||| |||||||||  ||||||||||||||||| ||| |||||    
T  21075817 gcacgggtacaagtattttttataaatgcgggtatggggacgggcactgtagtaccctatccattgggtacccattgccatccctaa 21075731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 94 - 279
Target Start/End: Complemental strand, 14576879 - 14576694
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| || |||| | |||||||||||||||| |||| |||||  | |||| | ||||| |||||| ||||||||||||| ||||||     
T  14576879 ttttcatagttaaagtgcggataatggatgcgggtatgggcactgaggtacccataggatatggggaaggggactaaaattgttgcccacgagggtacgg 14576780  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || ||||||||| ||||||||| ||| |||||||| | || ||  ||| || |||||| |||||||||||||||||| ||| ||||    
T  14576779 gcacgggtacgggtattttttataaatgcgggtatggggacgggcactgtaataccctacccattgggtacccattgccatcccta 14576694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 94 - 228
Target Start/End: Complemental strand, 52595632 - 52595498
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||| || |||||  |||||||  | ||| |||||||||||||||||||| ||||||     
T  52595632 ttttcatagttaaagtgcgggtaatgggtgcgggtatggacacttaagtacccatagggtatgatgatggggactaaagttgttgcccacgagggtacgg 52595533  T
Q  194 gctcgggtacggatattttttacaaacgcgggtat 228  Q
    || ||| ||||||||||||||| ||| ||||||||    
T  52595532 gcacggatacggatattttttataaatgcgggtat 52595498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 2224980 - 2225100
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| |||||||||||| |||||||||| |||||  ||||||   ||||| |||||| ||||||||||||||||||||     
T  2224980 ttttcatagttaaagtgcgggtaatgggtgcgggtatgagcacttaggtacccatcgggtatggagaaggggactaaaattgttgcccacgaaggtacgg 2225079  T
Q  194 gctcgggtacggatatttttt 214  Q
    || ||||||||| ||||||||    
T  2225080 gcacgggtacgggtatttttt 2225100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 18491615 - 18491686
Alignment:
Q  280 attgtatccaagttttgttcacgtgctatttcaacaactttataagtttttgtttttgctaaaaagctttatg 352  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18491615 attgtatccaagttttgttcatgtgctatttcaacaactttataagttttt-tttttgctaaaaagctttatg 18491686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 92 - 270
Target Start/End: Complemental strand, 7262101 - 7261934
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||| || |||| || ||||||| ||||||||||||||||||||||          ||||| ||||| | |||||||||||||||||||| ||||     
T  7262101 tcttttcagagttaaactgcgggtaatgggtgcgggtatgggcacttagg----------gtatgggaaagagcactaaagttgttgcccacgatggtag 7262012  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    | || || |||||| |||||||||||||||||| ||||| ||||| |||||||||||| ||| || |||||||||||||    
T  7262011 g-gcccgagtacgggtattttttacaaacgcggatatagggatgggtactatagtaccttgctcactgggtacccattg 7261934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 94 - 228
Target Start/End: Complemental strand, 652332 - 652198
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||  |||||||||||||||  ||||||||| |||||||||||| |||||  ||||||   ||||| ||||  |||||||||||||||||||||     
T  652332 ttttcataattaaagtgtgggtaatgagtgcgggtaagggcacttaggtacccatagggtatggagaaggggactattgttgttgcccacgaaggtacgg 652233  T
Q  194 gctcgggtacggatattttttacaaacgcgggtat 228  Q
    || ||||||||| ||||||||| ||| ||||||||    
T  652232 gcacgggtacgggtattttttataaatgcgggtat 652198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 91 - 270
Target Start/End: Original strand, 26340251 - 26340446
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||| ||| | ||||||| ||||||| |||||||||||||| ||||| ||||||||  | |||| | ||||| |||||||||||||||||||| ||||    
T  26340251 atctttccatggctaaagtgcgggtaatgggtgcgggtatgggtacttaagtgcccataggatatggggaagggcactaaagttgttgcccacgagggta 26340350  T
Q  191 cgagctcgggtacg----------------gatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    || || |||||||                 || ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  26340351 cgggcacgggtacatacgggcacgggtacagacattttttacaaacgcgggtatggggatggatactatagtaccctacccattgggtacccattg 26340446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 92 - 270
Target Start/End: Complemental strand, 46080807 - 46080629
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| ||||||||||||||  |||||||||||| |||||| |||| |||  ||||||   || |  |||||||||||||||||||| | |||    
T  46080807 tcttttcatagagaaagtgtgggtaatgagtgcgggtatggacacttaagtgctcatagggtatggagaatgacactaaagttgttgcccacgaggctac 46080708  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    |  | | |||||||  |||||||||||| | |||||| | ||| | ||||||||||||||  |||||||||||||||||    
T  46080707 ggacacaggtacgggcattttttacaaatgagggtatggggattggtactatagtaccctatccattgggtacccattg 46080629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 94 - 279
Target Start/End: Complemental strand, 29994407 - 29994222
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| | ||| |||| || || |||||| |||||    ||||  |||||| ||||||||||||||||||||||||||||    
T  29994407 ttttcatagttaaagtgcgggtaatggatgcaggtacggacatttaggtacccatagaatatggaaaagggcactaaagttgttgcccacgaaggtacga 29994308  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || ||| ||| | || |||||||||| | |||||| | |||||  | | ||||||||| ||||||| |||| ||||||||| ||||    
T  29994307 gcacggctacaggtaatttttacaaatgtgggtatggggatgggcattgtagtaccctacccattgagtactcattgtcatcccta 29994222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 114 - 279
Target Start/End: Complemental strand, 41780724 - 41780559
Alignment:
Q  114 gtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttt 213  Q
    ||||| ||||||||||||| |||||| |||||||| || |||  | ||||| |||||||||||||| || || ||| || |||||| ||||   ||||||    
T  41780724 gtaatgggtgcgggtatggacacttaagtgcccataagatatagggaagggcactaaagttgttgctcatgagggttcgggctcggatacgagcattttt 41780625  T
Q  214 tacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||||||||||   |||||||||| ||||||||||| ||||| ||||| || | |||||||| ||||    
T  41780624 tacaaacgcgaacatagagatgggtactatagtactctgcctattggatatctattgtcatcccta 41780559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 280
Target Start/End: Original strand, 34459652 - 34459840
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| |||||||  ||||  ||||| |||||||| | |||||  |||||||| || |  |||||||||||||| ||||| |||||    
T  34459652 tcttttcatagttaaagtgcgggtaatgagtgcaagtatgtgcacttagatacccatagggtatgaggaatgacactaaagttgttgcacacgagggtac 34459751  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    | || ||| ||| |||| |||||| ||| ||||||||   |||||  | ||||||||||| || ||||||||||||||| ||| |||||    
T  34459752 gggcacggatacagataatttttaaaaatgcgggtatgaggatgggcattatagtaccctacctattgggtacccattgccatccctaa 34459840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 93 - 272
Target Start/End: Complemental strand, 9609056 - 9608879
Alignment:
Q  93 cttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacg 192  Q
    |||||||||| ||||||||||||||| | ||||| |||  | |||||||| ||||| ||||||| |||| || |||||| ||||||||||||| ||||||    
T  9609056 cttttcatagttaaagtgtgggtaatggatgcggatattagaacttaggtacccataaggtatg-gaaaaggcactaaaattgttgcccacgagggtacg 9608958  T
Q  193 agctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtc 272  Q
     |||| |||||||  |||||| | |||||   |||| | || || |||| ||||||||| ||||||||||| ||||||||    
T  9608957 -gctcaggtacgggcatttttaataaacgatagtatggggaagggtactgtagtaccctacccattgggtatccattgtc 9608879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 124 - 274
Target Start/End: Complemental strand, 24486629 - 24486478
Alignment:
Q  124 cgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatatttttt-acaaacgc 222  Q
    ||||||||  |||||||||| ||||  |||||| |||| |  |||||||||||| ||||| ||||||||  |||||||||| | ||||||| ||||||||    
T  24486629 cgggtatgatcacttaggtgtccatagggtatgggaaatgacactaaagttgttacccacaaaggtacggactcgggtacgaacatttttttacaaacgc 24486530  T
Q  223 gggtatagagatggatactatagtaccctgcccattgggtacccattgtcat 274  Q
    | |||| | || || |||||||||||||| |||||||| || ||||||||||    
T  24486529 gagtatggggaagggtactatagtaccctacccattggatatccattgtcat 24486478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 33733466 - 33733340
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| ||||| |||||||||||||| ||||||||  |||||| | ||||  |||||| |||||  |||||||| |||    
T  33733466 tcttttcatagagaaagtgcgggtaatgggtgcaggtatgggcacttaagtgcccatagggtatggggaaggacactaaa-ttgttatccacgaagatac 33733368  T
Q  192 gagctcgggtacggatattttttacaaa 219  Q
    | |||||| |||||| ||||||||||||    
T  33733367 gggctcggatacggacattttttacaaa 33733340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 94 - 236
Target Start/End: Complemental strand, 33983224 - 33983082
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||| | |||||  | |||  ||||||| ||||||||| |||||||||| ||||||     
T  33983224 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttagatacccataggatataggaaagggcactaaagttattgcccacgagggtacgg 33983125  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatgg 236  Q
     | ||||||| | || |||||| ||| || | |||||||||||    
T  33983124 acacgggtacaggtaatttttaaaaatgcagatatagagatgg 33983082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 56445183 - 56445277
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacga 185  Q
    |||||||||| | ||||||| ||||||| |||||| ||||||||||||| |||||||| ||||||| | ||||  ||||||||||||||||||||    
T  56445183 atcttttcatggctaaagtgcgggtaatgggtgcgagtatgggcacttaagtgcccataaggtatggggaaggacactaaagttgttgcccacga 56445277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 44293024 - 44293117
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||| ||||||||||||||| ||||||||||  | |||||||||| ||||   ||||| ||||||| ||||||||||||||||||||||||||    
T  44293024 catagttaaagtgtgggtaatgggtgcgggtacagacacttaggtgtccatagagtatgggaaagggcactaaagttgttgcccacgaaggtac 44293117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 104 - 268
Target Start/End: Original strand, 51806964 - 51807127
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| ||||||| ||| | |||||||||||||||||  ||||  |||||| | | ||| |||||| || || ||||||| |||||| ||||||| ||    
T  51806964 taaagtgcgggtaatgggtacaggtatgggcacttaggttaccatagggtatggggaggggcactaaaattattacccacgagggtacgggctcgggcac 51807063  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccat 268  Q
    ||| |||||||||||| ||||||||   || || || |||||||||||  |||||||||||||||    
T  51807064 ggaaattttttacaaatgcgggtatgaggaagggtattatagtaccct-accattgggtacccat 51807127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 274
Target Start/End: Original strand, 27586605 - 27586787
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||  ||||||||||||| |   |||||||||||||| |||||| |||||  ||||||   || || | |||||||||| |||||||||||||    
T  27586605 tcttttcataattaaagtgtgggtattgaatgcgggtatgggcatttaggtacccatagggtatggagaacggcagtaaagttgttccccacgaaggtac 27586704  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcat 274  Q
    | || |||||| || ||||||||||||| |  |||| || || ||  | | ||||||||| ||||| || |||||||||||||    
T  27586705 gggcacgggtaagggtattttttacaaatgtaggtacagggaagggcattgtagtaccctacccataggttacccattgtcat 27586787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 22247949 - 22247849
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| || |||| |||||||||||| ||||||| ||||| ||  |||||| | ||||| |||||||||||||||||| | |||||    
T  22247949 tcttttcatagagaaagtgcggataatgggtgcgggtatgagcacttaagtgcctatagggtatggggaagggcactaaagttgttgcccacaagggtac 22247850  T
Q  192 g 192  Q
    |    
T  22247849 g 22247849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 259
Target Start/End: Original strand, 50982012 - 50982136
Alignment:
Q  135 acttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagat 234  Q
    ||||||||||||||  |||||| | ||||  ||||||| ||||| |||||| ||||||| || |||||||| ||||||||||||||| | |||| | ||     
T  50982012 acttaggtgcccatagggtatggggaaggacactaaagatgttgtccacgagggtacgaacttgggtacgggtattttttacaaacgtgagtatggggaa 50982111  T
Q  235 ggatactatagtaccctgcccattg 259  Q
    || ||||||| |||||| |||||||    
T  50982112 gggtactataataccctacccattg 50982136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 21297390 - 21297469
Alignment:
Q  200 gtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||| || |||||||||||||||  |||||||||  ||||||||||||||| ||||||||||||||||| ||| ||||    
T  21297390 gtacgggtagtttttacaaacgcggaaatagagatgagtactatagtaccctgtccattgggtacccattgccatcccta 21297469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 23147474 - 23147367
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    |||||||||||| |||||| || || ||  |||||| | || |  ||||||||| ||||||||||||||||| || ||||||||||||||||||| |||     
T  23147474 gtgcgggtatggacacttaagtacctatagggtatggggaatgagactaaagttcttgcccacgaaggtacgggcacgggtacggatattttttataaat 23147375  T
Q  221 gcgggtat 228  Q
    ||||||||    
T  23147374 gcgggtat 23147367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 92 - 268
Target Start/End: Original strand, 31713656 - 31713820
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||  |||| || ||||||| ||||||||||||| |||||||||||||||   |||||   ||||  ||||||||| ||||| ||||||||||    
T  31713656 tcttttcataattaaaatgcgggtaataggtgcgggtatggacacttaggtgcccatagagtatggagaaggacactaaagttattgcctacgaaggtac 31713755  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccat 268  Q
    |||            |||||||||||||||| |||||||  |||| ||||||| |||||| | ||||||||||||||    
T  31713756 gag------------tattttttacaaacgcaggtataggaatgggtactataataccctactcattgggtacccat 31713820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 52013844 - 52013730
Alignment:
Q  145 ccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactata 244  Q
    |||| ||||||| | ||||  ||| ||||||||||| ||||||||| | ||| |||||| |  ||||||||||||||||| ||| | ||||| |||||||    
T  52013844 ccataaggtatggggaaggacactgaagttgttgcctacgaaggtatgggcttgggtacaggcattttttacaaacgcggatatggggatgggtactata 52013745  T
Q  245 gtaccctgcccattg 259  Q
    ||||||| |||||||    
T  52013744 gtaccctacccattg 52013730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 95 - 259
Target Start/End: Complemental strand, 21245926 - 21245761
Alignment:
Q  95 tttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgag 194  Q
    |||||||| |||||||||| |||| | ||||| ||||||||||||| | |||||  ||||||   ||||| |||| |||||||||||||||   |||| |    
T  21245926 tttcatagttaaagtgtggataatggatgcggatatgggcacttagatacccatagggtatggagaaggggactacagttgttgcccacgagaatacgtg 21245827  T
Q  195 ctcgggtacg-gatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    | |||||||| ||  ||||||| ||| || ||||| | |||||| ||| ||||||||| |||||||    
T  21245826 cacgggtacgagaatttttttataaatgcaggtatggggatggacactgtagtaccctacccattg 21245761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 41003407 - 41003318
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccac 183  Q
    ||||||||| ||||||| ||||||| |||||||||||| |||||||||| |||||  | |||| | ||||| | ||||||||||||||||    
T  41003407 ttttcatagttaaagtgcgggtaatgggtgcgggtatgagcacttaggtacccataggatatggggaaggggattaaagttgttgcccac 41003318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 259
Target Start/End: Complemental strand, 38000651 - 38000519
Alignment:
Q  122 tgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggata-ttttttacaaac 220  Q
    ||||||||||||||||||||| ||||| ||||||| | ||||  |||||||||||||||||||  ||||      ||||||||  || ||||||| |||     
T  38000651 tgcgggtatgggcacttaggtacccataaggtatggggaaggagactaaagttgttgcccacgtgggta------cgggtacgagtatttttttataaat 38000558  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattg 259  Q
    |||||||| |||| ||| ||| ||||||||| |||||||    
T  38000557 gcgggtatggagacggacactgtagtaccctacccattg 38000519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 280
Target Start/End: Original strand, 54932778 - 54932937
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    |||||||||| | ||| |||||  |||| ||||||| | ||||  |||||||||||||||||||| | |||| || |||||| |  ||||||||| |||     
T  54932778 gtgcgggtattgacacctaggtatccataaggtatggggaaggagactaaagttgttgcccacgaggatacgtgcacgggtatgagtattttttataaat 54932877  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    |||| ||| | || ||  ||| | ||||||| |||||||| ||||||||||||| |||||    
T  54932878 gcggatatggggacgggcactgttgtaccctacccattggatacccattgtcatccctaa 54932937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 8644252 - 8644357
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||  |||||||| | |||| | |||||||||||| ||| || | ||||| || ||||||||| |  |||||||||||||||||| | |||||    
T  8644252 tcttttcataattaaagtgtagataatggatgcgggtatgggaactaagttacccataagatatgagaaatgacactaaagttgttgcccacaagggtac 8644351  T
Q  192 gagctc 197  Q
    ||||||    
T  8644352 gagctc 8644357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 3094990 - 3095038
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggt 142  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  3094990 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggt 3095038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 94 - 282
Target Start/End: Complemental strand, 25938452 - 25938264
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    |||| |||| |||||||  |||||| |||||||||||||| ||||| || ||||   ||||||   ||||| ||||||||||||| |||||| | |||      
T  25938452 tttttatagttaaagtgctggtaatgggtgcgggtatgggtacttaagtacccacatggtatggagaaggggactaaagttgttgtccacgaggatacag 25938353  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaatt 282  Q
    || ||| ||||||||||||||| |||  ||||||| |  | ||| | | ||||||||| || ||||| |||||||| || | |||||||    
T  25938352 gcacggatacggatattttttataaatacgggtatgggaacggacattgtagtaccctaccaattggatacccattatcttccctaatt 25938264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 279
Target Start/End: Complemental strand, 8066001 - 8065867
Alignment:
Q  144 cccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactat 243  Q
    ||||| ||||||| ||||||| ||||||||||||| || ||  |||||| || ||||||||  ||||||||| ||| || | ||| | |||||  ||| |    
T  8066001 cccataaggtatgggaaaggg-actaaagttgttgtccgcgtgggtacgggcacgggtacgagtattttttataaatgcagatatggggatgggcactgt 8065903  T
Q  244 agtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||| |||||||| ||||||||| ||| ||||    
T  8065902 agtaccctacccattggatacccattgccatcccta 8065867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 235
Target Start/End: Original strand, 2073667 - 2073776
Alignment:
Q  126 ggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcggg 225  Q
    |||| ||||||||| || |||||  |||||| | ||||| |||||||||||||||||||| | ||| ||| ||  ||||| || |||||| ||| |||||    
T  2073667 ggtacgggcacttacgtacccatagggtatggggaagggcactaaagttgttgcccacgaggatacaagcacgaatacgggtaatttttataaatgcggg 2073766  T
Q  226 tatagagatg 235  Q
    ||| ||||||    
T  2073767 tatggagatg 2073776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 259
Target Start/End: Original strand, 39485230 - 39485323
Alignment:
Q  166 actaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    |||||| ||||| |||  ||| ||||| ||||||||| ||| ||||||||||||||||||||| | ||    |||||||||||||| |||||||    
T  39485230 actaaaattgttacccgtgaaagtacgggctcgggtatggacattttttacaaacgcgggtatggggaaatgtactatagtaccctacccattg 39485323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 3098011 - 3098059
Alignment:
Q  166 actaaagttgttgcccacgaaggtacgagctcgggtacggatatttttt 214  Q
    ||||||||||||||| |||||| ||||||| |||||||| |||||||||    
T  3098011 actaaagttgttgcctacgaagatacgagcacgggtacgaatatttttt 3098059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 1731072 - 1731175
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||  ||||||| ||  ||| | ||| ||||||||||||||||| |||||   ||||| | |||||||||||| ||||||  ||||||| |||    
T  1731072 tcttttcataattaaagtgcggacaatggatgcaggtatgggcacttaggtacccatagagtatggggaagggtactaaatttgttgttcacgaagatac 1731171  T
Q  192 gagc 195  Q
    ||||    
T  1731172 gagc 1731175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 54979173 - 54979252
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgtt 177  Q
    ||||| ||||||| ||||||| |||||||||||| | ||||| || |||||  |||||| | ||||| ||||||||||||    
T  54979173 catagttaaagtgcgggtaatgggtgcgggtatgtgtacttaagtacccatagggtatggggaaggggactaaagttgtt 54979252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 55760305 - 55760251
Alignment:
Q  168 taaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgc 222  Q
    |||| ||||||||||||||| || | | ||||||||||| |||||||||||||||    
T  55760305 taaaattgttgcccacgaagatatgggttcgggtacggacattttttacaaacgc 55760251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 22247845 - 22247772
Alignment:
Q  208 attttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    |||||||||||| | |||||| | ||||| ||||||||||||||  ||||||| || |||||| ||| ||||||    
T  22247845 attttttacaaatgagggtatggggatgggtactatagtaccctatccattggatatccattgccatccctaat 22247772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 22313378 - 22313487
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| || ||||  |||||||||||| ||||||| | |||||  | |||| | ||||  |||||||||||| |||| || ||||||     
T  22313378 ttttcatagttaaagtgcggataatgagtgcgggtatggacacttagatacccataggatatggggaaggacactaaagttgtttcccatgagggtacgg 22313477  T
Q  194 gctcgggtac 203  Q
    || |||||||    
T  22313478 gcacgggtac 22313487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 31487280 - 31487220
Alignment:
Q  168 taaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtat 228  Q
    |||| ||||||||||||| |||| | | |||| ||||| |||||||||||||| |||||||    
T  31487280 taaaattgttgcccacgagggtatgggttcggatacgggtattttttacaaacacgggtat 31487220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 94 - 279
Target Start/End: Complemental strand, 6337318 - 6337133
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||  |||||| | || || |||||||||||||||||||| |||||||    
T  6337318 ttttcatagctaaagtgtgggtaataggtgcgggtatgggcacttaggtacccatagggtatggggaatggcactaaagttgttgcccacgagggtacga 6337219  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || |||||| |||||||| ||||||| | |||||| | |||||  ||||||||||||| |||||||||||||||||| ||| ||||    
T  6337218 gcacgggtatggatatttcttacaaatgtgggtatggggatgggcactatagtaccctacccattgggtacccattgccatcccta 6337133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 92 - 281
Target Start/End: Original strand, 24447148 - 24447337
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||||||| ||||||||  |||||| | ||||| | |||||||||||||||||| |||||    
T  24447148 tcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccatagggtatggggaagggcattaaagttgttgcccacgagggtac 24447247  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    | ||||||||||||| |||||||||||| | |||||| | ||||||||||||||||||||  ||||||||||||||||| ||| ||||||    
T  24447248 gggctcgggtacggacattttttacaaatgagggtatggggatggatactatagtaccctatccattgggtacccattgccatccctaat 24447337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 92 - 281
Target Start/End: Original strand, 1221737 - 1221926
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||||||| ||||||||  |||||| | ||||| | ||||||||||| |||| | |||||    
T  1221737 tcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccatagggtatggggaagggcattaaagttgttgtccacaagggtac 1221836  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    | ||||||||||||| |||||||||||| | |||||| | ||||||||||||||||||||  ||||||||||||||||| ||| ||||||    
T  1221837 gggctcgggtacggacattttttacaaatgagggtatggggatggatactatagtaccctatccattgggtacccattgccatccctaat 1221926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 91 - 280
Target Start/End: Original strand, 9062168 - 9062358
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||| ||| | ||||||| ||||||| |||||||||||||||||||| ||||||||  |||||| | ||||| ||||||||||||| |||||| ||||    
T  9062168 atctttccatggctaaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccatagggtatggggaagggcactaaagttgttgtccacgagggta 9062267  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccatt-gggtacccattgtcattcctaa 280  Q
    ||  | |||||||||  ||||||||||||||||||||| | ||||||||||||||||||||  ||||| |||||||||||| ||| |||||    
T  9062268 cggacacgggtacgggcattttttacaaacgcgggtatggggatggatactatagtaccctatccattggggtacccattgccatccctaa 9062358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 94 - 279
Target Start/End: Original strand, 20691614 - 20691799
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||  |||||| | ||||| |||||||||||||||||||| ||||||     
T  20691614 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggtacccatagggtatggggaaggggactaaagttgttgcccacgagggtacgg 20691713  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
     | ||||||||||||||||||| ||| |||| || || || ||  ||| ||||||||| |||||||||| ||||||| ||| ||||    
T  20691714 acacgggtacggatattttttataaatgcggatagagggacgggcactgtagtaccctacccattgggtgcccattgccatcccta 20691799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 121 - 279
Target Start/End: Original strand, 6799478 - 6799636
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    |||||||||||| || ||| |||||||| ||||||| | ||||| ||||||| |||||||||||| |||||| |  |||||||||  |||||||||||||    
T  6799478 gtgcgggtatggacatttaagtgcccataaggtatggggaagggcactaaagatgttgcccacgagggtacgggtacgggtacgggcattttttacaaac 6799577  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||| | |||||||||||||||||| | |||||||||||||||||| ||| ||||    
T  6799578 gcgggtatggggatggatactatagtaccttacccattgggtacccattgccatcccta 6799636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 94 - 279
Target Start/End: Original strand, 1329587 - 1329772
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| |||| ||||||||||||||||||  ||||  |||||| | ||||| |||||||||||||||||||| |||| |     
T  1329587 ttttcatagttaaagtgcgggtaatgggtgtgggtatgggcacttaggtatccatagggtatggggaaggggactaaagttgttgcccacgagggtaagg 1329686  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || ||||||||  ||||||||| ||| |||||||| | || ||| ||| |||||||||||||||||| ||||||||| ||| ||||    
T  1329687 gcacgggtacgagtattttttataaatgcgggtatggggacggacactgtagtaccctgcccattggatacccattgccatcccta 1329772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 112 - 280
Target Start/End: Original strand, 6337979 - 6338147
Alignment:
Q  112 gggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattt 211  Q
    |||||||||||||||||||| || |||||||||||||  |||||| | ||||| |||||||||||||||||||| |||| | || ||  ||||  |||||    
T  6337979 gggtaattggtgcgggtatgagctcttaggtgcccatagggtatggggaagggcactaaagttgttgcccacgagggtatgggcccgaatacgtgtattt 6338078  T
Q  212 tttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    ||||||||||||||||| ||||||  || |||| | ||||||||||| ||||||||||| ||| |||||    
T  6338079 tttacaaacgcgggtatggagatgagtattataattccctgcccattaggtacccattgccatccctaa 6338147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 279
Target Start/End: Complemental strand, 33328669 - 33328488
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| |||||||  ||||||||||||  ||||| || |||||  |||||| | ||||| |||||||||||||||||| | |||||| || |    
T  33328669 catagttaaagtgcgggtaatgagtgcgggtatggttacttaagtacccatagggtatggggaaggggactaaagttgttgcccacaagggtacgggcac 33328570  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||| ||||||||||| ||| |||||||| |||| ||| | | |||||||||  ||||||||||||||||| ||| ||||    
T  33328569 gggtacagatattttttataaatgcgggtatggagacggacattgtagtaccctatccattgggtacccattgccatcccta 33328488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 98 - 279
Target Start/End: Complemental strand, 33331681 - 33331500
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| |||||||  ||||||||||| | | ||| || |||||  |||||| | ||||| |||||||||||||||||| | |||||| || |    
T  33331681 catagttaaagtgcgggtaatgagtgcgggtatgagtaattaagtacccatagggtatggggaaggggactaaagttgttgcccacaagggtacgggcac 33331582  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||| ||||||||| ||| |||||||| |||| ||| | | |||||||||  ||||||||||||||||| ||| ||||    
T  33331581 gggtacgggtattttttataaatgcgggtatggagacggacattgtagtaccctatccattgggtacccattgccatcccta 33331500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 94 - 281
Target Start/End: Complemental strand, 31070881 - 31070694
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||  || ||  ||||||| |||||||||||||  ||||| ||||||     
T  31070881 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaggtacccataggggattggaaaggggactaaagttgttgttcacgagggtacgg 31070782  T
Q  194 gctcgggtacggata-ttttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    || || |||||| || ||||||| ||| |||||||| || | ||  ||| ||||||||| | |||||||||||||||| ||| ||||||    
T  31070781 gcacgtgtacgggtatttttttataaatgcgggtatgga-acgggcactgtagtaccctactcattgggtacccattgccatccctaat 31070694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 98 - 279
Target Start/End: Original strand, 13534221 - 13534403
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| |||||||||||||| ||||| || |||||  |||||| | || || |||||||||||||||||||| ||||||  | |    
T  13534221 catagttaaagtgcgggtaatgggtgcgggtatgggtacttaagtacccatatggtatggggaatgggactaaagttgttgcccacgagggtacggacac 13534320  T
Q  198 gggtacggata-ttttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||| | || ||||||| ||| |||||||| | |||||  | | ||||||||| |||||||||||||||||| ||| ||||    
T  13534321 gggtacaggtatttttttataaatgcgggtatggggatgggcattgtagtaccctacccattgggtacccattgccatcccta 13534403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 262
Target Start/End: Original strand, 29641505 - 29641646
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    ||||||||||||||||||||||||||||  |||||| | | ||  ||||||||||||| |||||| |||||| || |||||| || ||||||||| |||     
T  29641505 gtgcgggtatgggcacttaggtgcccatatggtatggggatggcgactaaagttgttgtccacgagggtacgggcacgggtatgggtattttttataaat 29641604  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattgggt 262  Q
    |||| ||| | || |||  || ||||||||| ||||||||||    
T  29641605 gcggatatggggacggacgctgtagtaccctacccattgggt 29641646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 6938128 - 6938039
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacg 184  Q
    ||||||||||| ||||||| ||||    ||||||||||||||||||||||| |||||  |||||| | ||||| |||||||||||||||||||    
T  6938128 tcttttcatagttaaagtgcgggtg---ggtgcgggtatgggcacttaggtacccatagggtatggggaagggcactaaagttgttgcccacg 6938039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 9350875 - 9350745
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgaga-aagggtactaaagttgttgcccacgaaggta 190  Q
    ||||||||||| |||  ||  |||||||| |||||||||| ||||| ||||||||||    ||| ||| ||| |||||||||||||||||||||||| ||    
T  9350875 tcttttcatagttaacatgcaggtaattgttgcgggtatgagcactaaggtgcccatataatat-agagaagagtactaaagttgttgcccacgaagata 9350777  T
Q  191 cgagctcgggtacggatattttttacaaacgc 222  Q
    |||| |||  ||| | ||||||||||||||||    
T  9350776 cgagttcgattacaggtattttttacaaacgc 9350745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 31784025 - 31784132
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    ||||||||||| |||||||||| |||||  |||||| | ||||| ||||||||||||||  |||| |||||| || || |||||  ||||||||| |||     
T  31784025 gtgcgggtatgagcacttaggtacccatagggtatggggaaggggactaaagttgttgcgtacgagggtacgggcacgtgtacgtgtattttttataaat 31784124  T
Q  221 gcgggtat 228  Q
    ||||||||    
T  31784125 gcgggtat 31784132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 28769963 - 28769875
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgccca 182  Q
    ||||||||| ||||||| ||||||| ||||||||||||| ||||||||| |||||  | |||| | || |  |||||||||||||||||    
T  28769963 ttttcatagctaaagtgcgggtaatgggtgcgggtatggacacttaggtacccataggatatggggaatgacactaaagttgttgccca 28769875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 31511683 - 31511776
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatatttttt 214  Q
    ||||||||||||||||||||||||||||  |||||| | | ||  ||||||||||||| |||||| | |||| || || ||| || ||||||||    
T  31511683 gtgcgggtatgggcacttaggtgcccatggggtatggggatggcgactaaagttgttgtccacgaggatacgggcacgagtatgggtatttttt 31511776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 227
Target Start/End: Original strand, 3516207 - 3516330
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| ||||||| || ||| ||| ||||| |||| |||||||  || ||| | | ||| | |||| |||||||||| ||||||| | | ||||||||    
T  3516207 taaagtgcgggtaatgggcgcgagtacgggcatttagatgcccatatggcatggggacgggcagtaaaattgttgcccatgaaggtatgggttcgggtac 3516306  T
Q  204 ggatattttttacaaacgcgggta 227  Q
    ||  ||||||||||||||| ||||    
T  3516307 gggcattttttacaaacgcaggta 3516330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 34301396 - 34301455
Alignment:
Q  174 tgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagaga 233  Q
    ||||| || ||| |||||||||||||||||  |||||||||||||| ||| |||||||||    
T  34301396 tgttgtcctcgagggtacgagctcgggtacatatattttttacaaatgcgagtatagaga 34301455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 10499254 - 10499164
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgccca 182  Q
    ||||||||||| ||||||| | ||||| ||||| | |||| | ||||||||||||||  | |||| | ||||| | |||||||||||||||    
T  10499254 tcttttcatagttaaagtgcgtgtaatgggtgctgatatgagaacttaggtgcccataggatatggggaagggcagtaaagttgttgccca 10499164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 10499147 - 10499086
Alignment:
Q  209 ttttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    |||||||||||||||| ||| |||| ||  ||||||||||| ||| ||||||||| ||||||    
T  10499147 ttttttacaaacgcggatatggagaggggcactatagtaccatgctcattgggtatccattg 10499086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 6938037 - 6937965
Alignment:
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    |||||||| || |||||||||| |||||||| | |||||  | | ||||||||| ||||| ||||||||||||    
T  6938037 gggtacgggtaatttttacaaatgcgggtatggggatgggcattgtagtaccctacccatagggtacccattg 6937965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 5e-47; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 15674007 - 15674193
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||| || |||| || || |||| ||||||||||||| |||||||||||||||  |||||| ||| ||| || ||||||||||||||||| |||||    
T  15674007 tcttttcagagttaaattgcggataatgggtgcgggtatggacacttaggtgcccatagggtatgggaa-gggcacgaaagttgttgcccacgagggtac 15674105  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | || ||||||||| |||||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  15674106 gggcccgggtacgggtattttttacaaacgcgggtatggggatgggtactatagtaccctgcccattggatacccattgtcatcccta 15674193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 115 - 280
Target Start/End: Original strand, 33347126 - 33347291
Alignment:
Q  115 taattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatatttttt 214  Q
    |||| ||||||||||||| |||||||||||||||  |||||| | ||||| || ||||||||||||||||| |||||| || |||||||| |||||||||    
T  33347126 taatgggtgcgggtatggacacttaggtgcccatagggtatggggaagggcacgaaagttgttgcccacgagggtacgggcccgggtacgaatatttttt 33347225  T
Q  215 acaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    |||||||||| ||| | ||||| ||||||||||||||||||||||||||||||||| ||| |||||    
T  33347226 acaaacgcggatatggggatgggtactatagtaccctgcccattgggtacccattgccatccctaa 33347291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 92 - 281
Target Start/End: Original strand, 41692495 - 41692684
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||||||| ||||||||  |||||| | ||||| | |||||||||||||||||| |||||    
T  41692495 tcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccatagggtatggggaagggcattaaagttgttgcccacgagggtac 41692594  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    | | ||||||||||| |||||||||||| | |||||| | ||||||||||||||||||||  ||||||||||||||||| ||| ||||||    
T  41692595 gggttcgggtacggacattttttacaaatgagggtatggggatggatactatagtaccctatccattgggtacccattgccatccctaat 41692684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 19254515 - 19254702
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||||||||||||||||||| |||| |||  |||||| | ||||| ||||||||||||| |||||| |||||    
T  19254515 tcttttcatagagaaagtgcgggtaatgggtgcgggtatgggcacttaagtgctcatagggtatggggaagggcactaaagttgttgtccacgagggtac 19254614  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | ||| ||||||||  |||||||||||| | |||||| | ||||||||||||||||||||  ||||| ||||||||||||||| ||||    
T  19254615 gggcttgggtacgggcattttttacaaatgagggtatggggatggatactatagtaccctatccattaggtacccattgtcatcccta 19254702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 92 - 281
Target Start/End: Original strand, 34718811 - 34719000
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||||||| ||||||||  |||||| | ||||| | ||||||||||| |||||| |||||    
T  34718811 tcttttcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccatagggtatggggaagggcattaaagttgttgtccacgagggtac 34718910  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    | ||||||| ||||| |||||||||||| | |||||| | ||||||||||||||||||||  ||||||||||||||||| ||| ||||||    
T  34718911 gggctcggggacggacattttttacaaatgagggtatggggatggatactatagtaccctatccattgggtacccattgccatccctaat 34719000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 91 - 279
Target Start/End: Complemental strand, 29455872 - 29455684
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||| ||||||| | ||||| |||||||||||||||||||| ||||    
T  29455872 atcttttcatagttaaagtgtgggtaatgggtgcgggtatgggcacttagatacccataaggtatggggaagggcactaaagttgttgcccacgagggta 29455773  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||  | ||||||||| || |||||| ||| |||||||| | |||||| | ||||||||||| |||||||| | ||||||| ||| ||||    
T  29455772 cggacacgggtacgggtaatttttaaaaatgcgggtatggggatggacattatagtaccctacccattggatgcccattgccatcccta 29455684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 279
Target Start/End: Original strand, 4901988 - 4902155
Alignment:
Q  112 gggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattt 211  Q
    ||||||| |||||||||||||||||||||||||||||  |||||| | ||||| |||||||||||| ||||||| ||||||  | ||||||| || ||||    
T  4901988 gggtaatgggtgcgggtatgggcacttaggtgcccatagggtatggggaagggcactaaagttgttacccacgagggtacggacacgggtacagacattt 4902087  T
Q  212 tttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    ||||||||||||||||| | ||||  |||||||||||||| | |||||||| ||||||| ||| ||||    
T  4902088 tttacaaacgcgggtatggggatgagtactatagtaccctactcattgggtgcccattgccatcccta 4902155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 94 - 280
Target Start/End: Complemental strand, 14088346 - 14088161
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| ||| ||||||||||||||||||| || ||  |||||| | ||||| ||||||||||||||| |||| ||||||     
T  14088346 ttttcatagttaaagtgcgggtaatgggtacgggtatgggcacttaggtacc-atagggtatggggaaggggactaaagttgttgcctacgagggtacgg 14088248  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    || ||||||||| ||||||||| ||| |||||||| | || ||  ||| ||||||||| |||||||||||||||||||||| |||||    
T  14088247 gcacgggtacgggtattttttataaatgcgggtatggggacgggcactgtagtaccctacccattgggtacccattgtcatccctaa 14088161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 92 - 280
Target Start/End: Complemental strand, 35935386 - 35935204
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||| || |||| |||||||||| ||||||||||||||||||||||||||| |  ||||||   ||||| |||||||||||||||||||| |||||    
T  35935386 tcttttcagagttaaactgtgggtaatgggtgcgggtatgggcacttaggtgcccgtagggtatggagaagggcactaaagttgttgcccacgagggtac 35935287  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    | || ||||      ||||||||||||||| ||||||   ||||| || |||||||||||||||||||| ||||||||||||| |||||    
T  35935286 gggcccggg------tattttttacaaacgtgggtatgaggatgggtagtatagtaccctgcccattggatacccattgtcatccctaa 35935204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 94 - 280
Target Start/End: Complemental strand, 41616662 - 41616476
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||| || |||||  ||||||   ||||| |||||||||||||||||||| ||||||     
T  41616662 ttttcatagttaaagtgcgggtaatgggtgcgggtatgggcacttaagtacccatagggtatggagaaggggactaaagttgttgcccacgagggtacgg 41616563  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    || ||| ||||| ||||||||| ||| |||||||| | || ||  | | ||||||||| || ||||||||||||||||||| |||||    
T  41616562 gcacggatacgggtattttttataaatgcgggtatggggacgggcattgtagtaccctacctattgggtacccattgtcatccctaa 41616476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 92 - 281
Target Start/End: Original strand, 639389 - 639578
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||| | ||| ||| ||||||||| |||||||||||||||||| || |||||  |||||| | || |  |||||||||||||||||||| |||||    
T  639389 tcttttcatggttaatgtgcgggtaattgatgcgggtatgggcacttaagtacccatagggtatggggaaagacactaaagttgttgcccacgagggtac 639488  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    || ||||| ||| | |||||||||||||||||| ||||  ||||| |||||| ||| ||||||||||| ||| |||||| ||| ||||||    
T  639489 gaactcggatacaggtattttttacaaacgcggatataaggatgggtactattgtatcctgcccattgagtatccattgccatccctaat 639578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 92 - 269
Target Start/End: Complemental strand, 19549430 - 19549253
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| ||||||| |||| ||||||||| |||||||| |||||  |||||| | |||| ||| ||||||||||||||||  |||||    
T  19549430 tcttttcatagttaaagtgcgggtaatgggtgtgggtatgggtacttaggtacccatggggtatggggaaggataccaaagttgttgcccacgtgggtac 19549331  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccatt 269  Q
    |||||||| |||    ||| |||||||||| |||||| | || || |||||||||||||| |||||||||||||||||    
T  19549330 gagctcggatacatgcattctttacaaacgtgggtatggggaagggtactatagtaccctacccattgggtacccatt 19549253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 94 - 270
Target Start/End: Complemental strand, 14087741 - 14087566
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| || |||| ||||||||||||||||||||| | |||||  |||||| | || || |||||||||||||||||||| ||||||     
T  14087741 ttttcatagttaaagtgcggataat-ggtgcgggtatgggcacttagatacccatagggtatggggaaaggcactaaagttgttgcccacgagggtacgg 14087643  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    || |||||||||||| |||||| ||| |||||||| | |||||  | | ||||||||| ||||||||||||||||||    
T  14087642 gcacgggtacggataatttttaaaaatgcgggtatggggatgggcattgtagtaccctacccattgggtacccattg 14087566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 279
Target Start/End: Complemental strand, 32302470 - 32302296
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||| ||| | ||||||| ||||||| |||||||||||||||||||| |||||||| ||||||| | ||||  ||||||||||||||||||||         
T  32302470 atctttccatggctaaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccataaggtatggggaaggacactaaagttgttgcccacga----- 32302376  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
             ||||||  ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  32302375 ---------gtacgggcattttttacaaacgcgggtatggggatggatactatagtaccctacccattgggtatccattgtcatcccta 32302296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 92 - 268
Target Start/End: Complemental strand, 38309856 - 38309679
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||||||||| |||||| || ||||  ||||||||||| ||||||| ||||||||  |||||| |||||||||||||| |||||||||| || |||||    
T  38309856 tcttttcatagagaaagtgcggataatgtgtgcgggtatgagcacttaagtgcccatagggtatgggaaagggtactaaaattgttgcccatgagggtac 38309757  T
Q  192 gagctcgggtacggata-ttttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccat 268  Q
    | ||||| ||||||  | ||||||| ||| | |||||| ||||||| ||||||||||||||  |||||||||| ||||    
T  38309756 gggctcgagtacgggcatttttttataaatgagggtatggagatgggtactatagtaccctatccattgggtatccat 38309679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 104 - 279
Target Start/End: Complemental strand, 16186836 - 16186661
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| ||||||| |||||| ||||||||||||| || ||||| | ||||| | || || |||||||||||||| ||||| |||||    ||| ||||    
T  16186836 taaagtgcgggtaatgggtgcgtgtatgggcacttaagtacccataaagtatgtggaaaggaactaaagttgttgctcacgagggtacagattcgagtac 16186737  T
Q  204 ggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || |||||||||||||||||| ||| |||||| ||||||| ||||||| |||||||| ||||||||| ||| ||||    
T  16186736 gggtattttttacaaacgcggatatggagatgaatactattgtacccttcccattggatacccattgccatcccta 16186661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 121 - 279
Target Start/End: Original strand, 15719238 - 15719396
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    ||||||||||||||||||| || |||||  |||||||| ||||| |||||||||||||||||||| |||||| || ||||||||| ||||||||| |||     
T  15719238 gtgcgggtatgggcacttaagtacccatagggtatgaggaaggggactaaagttgttgcccacgagggtacgggcacgggtacgggtattttttataaat 15719337  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||| ||| | || ||  | | ||||||||| |||||||||||||||||| ||| ||||    
T  15719338 gcggttatggggacgggcattgtagtaccctacccattgggtacccattgccatcccta 15719396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 92 - 270
Target Start/End: Original strand, 6277840 - 6278020
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcggg--tatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggt 189  Q
    |||||||||||| |||||| ||||||| ||||||||  |||||||||||| ||||||||  |||||| | ||| | ||||||||||||||||||   |||    
T  6277840 tcttttcatagagaaagtgcgggtaatgggtgcgggggtatgggcacttaagtgcccatagggtatggggaagagcactaaagttgttgcccactcgggt 6277939  T
Q  190 acgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    |||  ||||||| || | |||||||||||| | |||||| | ||||| ||||||||||||||  |||||||||| ||||||    
T  6277940 acggactcgggtgcgaacattttttacaaatgagggtatggggatgggtactatagtaccctatccattgggtatccattg 6278020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 279
Target Start/End: Complemental strand, 14645389 - 14645209
Alignment:
Q  98 catagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctc 197  Q
    ||||| ||||||| ||||||| ||||||||||||| |||||| || |||||  |||||| |  |||| |||||||||||||||||||| |||||| || |    
T  14645389 catagttaaagtgcgggtaatgggtgcgggtatggacacttaagtacccatagggtatgggggaggggactaaagttgttgcccacgagggtacgggcac 14645290  T
Q  198 gggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    |||||||| ||||||||| ||| |||||||| | || ||  | | ||||||||| |||||||||||||||||| ||| ||||    
T  14645289 gggtacgggtattttttataaatgcgggtat-gggacgggcattgtagtaccctacccattgggtacccattgccatcccta 14645209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 264
Target Start/End: Complemental strand, 10937469 - 10937329
Alignment:
Q  124 cgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcg 223  Q
    |||||||||||||||||||||||||  |||||| | ||||| |||||||||||| ||||||| |||| | ||||||||||||  ||||||||||||| ||    
T  10937469 cgggtatgggcacttaggtgcccatagggtatggggaagggcactaaagttgttacccacgagggtatgggctcgggtacgggcattttttacaaacacg 10937370  T
Q  224 ggtatagagatggatactatagtaccctgcccattgggtac 264  Q
    ||||| | || || ||||| |||||||| | ||||||||||    
T  10937369 ggtatggggaagggtactacagtaccctactcattgggtac 10937329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 94 - 280
Target Start/End: Complemental strand, 7978109 - 7977923
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| ||||||| |||||||||||| |||||||| | |||||  |||||| | ||||| |||||||||||||||||||| ||||||     
T  7978109 ttttcatagttaaagtgcgggtaatgggtgcgggtatgagcacttagatacccatagggtatggggaagggcactaaagttgttgcccacgagggtacgg 7978010  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
     | ||||||||| || |||||| ||| || |||||   |||||  | | ||||||||| ||||||||||| |||||| ||| |||||    
T  7978009 acacgggtacgggtaatttttaaaaatgcaggtatgaggatgggcattgtagtaccctacccattgggtaaccattgccatccctaa 7977923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 104 - 259
Target Start/End: Complemental strand, 30774875 - 30774719
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtac 203  Q
    ||||||| ||||| | ||||||||||| |||||||| ||||| ||  |||||| | ||||| |||||||||||||||||||| ||||||  | || ||||    
T  30774875 taaagtgcgggtagtgggtgcgggtataggcacttaagtgcctatagggtatggggaagggcactaaagttgttgcccacgagggtacggacacgagtac 30774776  T
Q  204 g-gatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    | |   |||||||||||||||| ||| | |||||||||||||||||||| |||||||    
T  30774775 gagcatttttttacaaacgcggatatggggatggatactatagtaccctacccattg 30774719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 94 - 282
Target Start/End: Original strand, 36470480 - 36470667
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| |||||||  |||||| ||||||||||||| ||||||||| |||||   ||||| | ||||| |||||||||||||||||| | ||||||     
T  36470480 ttttcatagctaaagtgctggtaatgggtgcgggtatggacacttaggtacccatagagtatggggaagggcactaaagttgttgcccacaagggtacgg 36470579  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaatt 282  Q
    ||  | ||| || | ||| |||||||   |||||| | |||||| |||||||||||||  ||||||||||||||||| ||| |||||||    
T  36470580 gcatgagtatgggt-tttcttacaaatctgggtatggggatggacactatagtaccctatccattgggtacccattgccatccctaatt 36470667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 121 - 280
Target Start/End: Original strand, 6224889 - 6225048
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    |||||||||||||||||| | | |||||  |||||| | ||||| ||||||||||||||||| || |||||| || ||||||||  || |||||| |||     
T  6224889 gtgcgggtatgggcacttggatacccatagggtatggggaagggcactaaagttgttgcccatgagggtacgggcacgggtacgagtaatttttaaaaat 6224988  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    |||||||| | |||||  | | ||||||||| |||||| | ||||||||||||| |||||    
T  6224989 gcgggtatggggatgggcattgtagtaccctacccattagatacccattgtcatccctaa 6225048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 92 - 270
Target Start/End: Original strand, 31149722 - 31149901
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatg-ggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    ||||||||||| ||||||| || |||| |||||||||||  ||||||||| | |||||  |||||| | ||||  |||||||| ||||||||||| ||||    
T  31149722 tcttttcatagttaaagtgcggataatgggtgcgggtataaggcacttagatacccatagggtatggggaaggacactaaagtcgttgcccacgagggta 31149821  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    |   | || ||||||||| |||||| ||| |||||||| | |||||  | | ||||||||| ||||||||||||||||||    
T  31149822 cagacacgagtacggataatttttaaaaatgcgggtatggggatgggcagtgtagtaccctacccattgggtacccattg 31149901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 184
Target Start/End: Complemental strand, 35853603 - 35853510
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacg 184  Q
    |||||||||| | ||||||| ||||||| |||||||||||||||||||| ||||||||  |||||| | ||||  |||||||||||||||||||    
T  35853603 atcttttcatggctaaagtgcgggtaatgggtgcgggtatgggcacttaagtgcccatagggtatggggaaggacactaaagttgttgcccacg 35853510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 1061026 - 1060918
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| | ||||| |||||||||||||||| |||||| |||||  | |||| | ||||| |||||||||||||||||||| ||||||     
T  1061026 ttttcatagttaaagtgcgtgtaatgggtgcgggtatgggcaattaggtacccataggatatggggaaggggactaaagttgttgcccacgagggtacgg 1060927  T
Q  194 gctcgggta 202  Q
    || ||||||    
T  1060926 gcacgggta 1060918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 92 - 264
Target Start/End: Original strand, 22632272 - 22632444
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| |||||||  |||| ||||||  ||||||||| ||||| ||||||| | || || |||||||||||||   ||||||||||    
T  22632272 tcttttcatagttaaagtgcgggtaatgagtgcaggtatgatcacttaggtacccataaggtatggggaatggcactaaagttgttgtatacgaaggtac 22632371  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtac 264  Q
    | || ||| ||| | || |||||||||| ||| |||| | |||||  | | ||||||||| ||||||||||||    
T  22632372 gggcacggatacaggtaatttttacaaatgcgagtatggggatgggcattgtagtaccctacccattgggtac 22632444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 214
Target Start/End: Complemental strand, 4572348 - 4572227
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| || |||| | |||| ||||| |||||||| | ||||| ||||||| | ||||| |||| ||||||||||||||| | |||    
T  4572348 tcttttcatagttaaagtgcggataatggatgcgagtatgagcacttagatacccat-aggtatggggaaggggactacagttgttgcccacgaggatac 4572250  T
Q  192 gagctcgggtacggatatttttt 214  Q
    |  | ||||||||||||||||||    
T  4572249 ggacacgggtacggatatttttt 4572227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 24489100 - 24489182
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagtt 174  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||| | |||||| |||  |||||||| || ||||||||||||    
T  24489100 tcttttcatagttaaagtgtgggtaatgggtgcgggtataggcattaaggtgcgcatagggtatgaggaaaggtactaaagtt 24489182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 92 - 261
Target Start/End: Complemental strand, 41983328 - 41983159
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||| ||||||| ||||| |||||| |||||||||| |||||   | ||  |||| |  |||||||||||||||||||| |||||    
T  41983328 tcttttcatagttaaagtgcgggtaatgggtgcaggtatgagcacttaggtacccatagagcataggaaatgacactaaagttgttgcccacgagggtac 41983229  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattggg 261  Q
    |||| |   ||||| || |||||||||| | ||||||   |||||  | | ||||||||| |||||||||    
T  41983228 gagcacatatacgggtaatttttacaaatgagggtatgaggatgggcattgtagtaccctacccattggg 41983159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 15023418 - 15023509
Alignment:
Q  168 taaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattg 259  Q
    |||| ||||||||||||| |||| | | |||||||| || ||||||||||||||| ||||| | || ||  | |||||||||||||||||||    
T  15023418 taaaattgttgcccacgagggtatgggttcgggtactgacattttttacaaacgccggtatggggacgggcattatagtaccctgcccattg 15023509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 261
Target Start/End: Complemental strand, 6092839 - 6092746
Alignment:
Q  168 taaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattggg 261  Q
    |||| ||||||||||||| |||| | | ||  ||||||  ||||||||||||||||||||| | || ||  | |||||||||||||||||||||    
T  6092839 taaaattgttgcccacgagggtatgggttcaagtacgggcattttttacaaacgcgggtatcgggacgggcattatagtaccctgcccattggg 6092746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 280
Target Start/End: Original strand, 20675000 - 20675112
Alignment:
Q  168 taaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtaccca 267  Q
    |||| |||||||||| || |||| | | | ||||||||  |||||||||||||||||||| || ||  |  | |||||||||||||||||||||  ||||    
T  20675000 taaaattgttgcccatgagggtatgggtttgggtacgggcattttttacaaacgcgggtacagggacaggcattatagtaccctgcccattgggggccca 20675099  T
Q  268 ttgtcattcctaa 280  Q
    ||| ||| |||||    
T  20675100 ttgccatccctaa 20675112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 35852030 - 35851983
Alignment:
Q  233 atggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    ||||||||||||||||||| ||||||||| |||||||| ||| |||||    
T  35852030 atggatactatagtaccctacccattgggaacccattgccatccctaa 35851983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 25694748 - 25694855
Alignment:
Q  166 actaaagttgttgcccacgaaggtacgagctcgggtacggatatttttt-acaaacgcgggtatagagatggatactatagtaccctgcccattgggtac 264  Q
    |||||||||||||| ||||| | ||||||||||||||| || ||||||| ||||| | |||||| || || | |||||||||| | |  |||||| ||||    
T  25694748 actaaagttgttgctcacgaggatacgagctcgggtacagacatttttttacaaatgagggtat-ga-ataggtactatagtagcatatccattgagtac 25694845  T
Q  265 ccattgtcat 274  Q
    ||||||||||    
T  25694846 ccattgtcat 25694855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Original strand, 25828448 - 25828505
Alignment:
Q  134 cacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||| |||| |||||  |||||||| ||||||||||||||||||| |||||| |||||    
T  25828448 cactaaggtacccatatggtatgaggaagggtactaaagttgttgtccacgagggtac 25828505  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 30793 - 30689
Alignment:
Q  166 actaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacc 265  Q
    |||||||||||||||||| ||| || ||  |||| |||| |||||||||||||| || ||||||| || ||| | | ||||||  | |||||  ||||||    
T  30793 actaaagttgttgcccacaaagatatgaattcggatacgaatattttttacaaatgcaggtatagggaaggacattgtagtacggtacccataaggtacc 30694  T
Q  266 cattg 270  Q
    |||||    
T  30693 cattg 30689  T

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Target: scaffold0160 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 92 - 279
Target Start/End: Original strand, 26154 - 26341
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| |||| || |||||||  |||||| |||| ||||||||||| ||||  |||||||| ||||| |||||||||||||||||||| |||||    
T  26154 tcttttcatagttaaaatgcgggtaatgagtgcggttatgagcacttaggtgaccatagggtatgaggaagggcactaaagttgttgcccacgagggtac 26253  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    | | |||| ||||| |||||||||||||||||||||| | ||||| ||||||||||||||  ||||||||||||||||| ||| ||||    
T  26254 gggttcggatacgggtattttttacaaacgcgggtatggggatgggtactatagtaccctatccattgggtacccattgccatcccta 26341  T

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Target: scaffold0230 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 92 - 281
Target Start/End: Complemental strand, 26715 - 26526
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||| ||||||| |||||| ||||||| |||| ||||||| ||||||| ||||||||  |||||| | ||||| | |||||||||||||||||| |||||    
T  26715 tcttgtcatagagaaagtgcgggtaatgggtgggggtatgagcacttaagtgcccatagggtatggggaagggcattaaagttgttgcccacgagggtac 26616  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaat 281  Q
    | |||||||||| || |||||||||||| | || ||| | ||||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  26615 gggctcgggtacagacattttttacaaatgaggatatggggatggatactatagtaccctatccattgggtacccattgtcatccctaat 26526  T

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Target: scaffold0242 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 121 - 270
Target Start/End: Original strand, 13129 - 13278
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    ||||||||||||||||||| || |||||  |||||| | || || |||||||||||||||||||| |||||| |||||||||| | ||||||| ||||||    
T  13129 gtgcgggtatgggcacttaagtacccatagggtatggggaaaggcactaaagttgttgcccacgagggtacgggctcgggtacaggtatttttcacaaac 13228  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    |||||||| | ||||| |||||| ||||| ||||||||||||||||||||    
T  13229 gcgggtatggggatgggtactattgtaccttgcccattgggtacccattg 13278  T

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Target: scaffold0242; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 121 - 270
Target Start/End: Original strand, 21964 - 22113
Alignment:
Q  121 gtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaac 220  Q
    ||||||||||||||||||| || |||||  |||||| | || || |||||||||||||||||||| |||||| |||||||||| | ||||||| ||||||    
T  21964 gtgcgggtatgggcacttaagtacccatagggtatggggaaaggcactaaagttgttgcccacgagggtacgggctcgggtacaggtatttttcacaaac 22063  T
Q  221 gcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    |||||||| | ||||| |||||| ||||| ||||||||||||||||||||    
T  22064 gcgggtatggggatgggtactattgtaccttgcccattgggtacccattg 22113  T

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Target: scaffold0024 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 91 - 280
Target Start/End: Original strand, 110032 - 110220
Alignment:
Q  91 atcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggta 190  Q
    |||||||||| | ||||||| ||||||| |||| ||||||| ||||||| || |||||  | |||| | ||||| |||||||||||||||||||||| ||    
T  110032 atcttttcatggctaaagtgcgggtaataggtgagggtatgagcacttaagtacccataggatatggggaagggcactaaagttgttgcccacgaagata 110131  T
Q  191 cgagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattcctaa 280  Q
    || || | | |||||  ||||||||||||||||||||| |||||||||||| ||||| ||| ||||||||||||| |||||||| |||||    
T  110132 cgggcacagatacgggcattttttacaaacgcgggtatggagatggatactgtagta-cctacccattgggtacctattgtcatccctaa 110220  T

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Target: scaffold0005 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 94 - 279
Target Start/End: Original strand, 240496 - 240681
Alignment:
Q  94 ttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacga 193  Q
    ||||||||| ||||||| || |||| | |||||||||||||||| |||| |||||  | |||| | ||||| |||||| ||||||||||||| ||||||     
T  240496 ttttcatagttaaagtgcggataatggatgcgggtatgggcactgaggtacccataggatatggggaaggggactaaaattgttgcccacgagggtacgg 240595  T
Q  194 gctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattgtcattccta 279  Q
    || ||||||||| ||||||||| ||| |||||||| | || ||  ||| || |||||| |||||||||||||||||| ||| ||||    
T  240596 gcacgggtacgggtattttttataaatgcgggtatggggacgggcactgtaataccctacccattgggtacccattgccatcccta 240681  T

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Target: scaffold0312 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 5899 - 6021
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||| || |||    | |||  | |||||  ||||||||||||||||||| |||||    
T  5899 tcttttcatagttaaagtgtgggtaatgggtgcaggtatgggcacttaagtacccgcaggatattgggaagggggctaaagttgttgcccacgagggtac 5998  T
Q  192 gagctcgggtacggatatttttt 214  Q
    | || ||||||||| ||||||||    
T  5999 gggcacgggtacgggtatttttt 6021  T

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Target: scaffold0164 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 7158 - 7260
Alignment:
Q  126 ggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcggg 225  Q
    ||||||||||||||||| ||| |  |||||||| ||||| |||||||||||||||||||| |||||| || ||||||  | ||||||||| ||| |||||    
T  7158 ggtatgggcacttaggtacccttagggtatgaggaaggggactaaagttgttgcccacgagggtacgggcacgggtataggtattttttataaatgcggg 7257  T
Q  226 tat 228  Q
    |||    
T  7258 tat 7260  T

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Target: scaffold0164; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 15039 - 15141
Alignment:
Q  126 ggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtacgagctcgggtacggatattttttacaaacgcggg 225  Q
    ||||||||||||||||| ||| |  |||||||| ||||| |||||||||||||||||||| |||||| || ||||||  | ||||||||| ||| |||||    
T  15039 ggtatgggcacttaggtacccttagggtatgaggaaggggactaaagttgttgcccacgagggtacgggcacgggtataggtattttttataaatgcggg 15138  T
Q  226 tat 228  Q
    |||    
T  15139 tat 15141  T

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Target: scaffold0249 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 228
Target Start/End: Complemental strand, 20113 - 19977
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||| | |||| || ||||||| ||||||||||||| |||||| ||  |||| || |||| | ||||| ||||||| ||||||||| || |||||    
T  20113 tcttttcatggttaaaatgcgggtaatgggtgcgggtatggacacttaagtatccataagatatggggaagggcactaaagatgttgcccaagagggtac 20014  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtat 228  Q
    |   |||||||| | |||||||||||||| |||||||    
T  20013 ggattcgggtacaggtattttttacaaacacgggtat 19977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0602 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0602
Description:

Target: scaffold0602; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 5088 - 4983
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    ||||||||||  |||||||| | |||| | |||||||||||| ||| || | ||||| || ||||||||| |  |||||||||||||||||| | |||||    
T  5088 tcttttcataattaaagtgtagataatggatgcgggtatgggaactaagttacccataagatatgagaaatgacactaaagttgttgcccacaagggtac 4989  T
Q  192 gagctc 197  Q
    ||||||    
T  4988 gagctc 4983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0938 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0938
Description:

Target: scaffold0938; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 104 - 263
Target Start/End: Complemental strand, 529 - 369
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaagg-tacgagctcgggta 202  Q
    ||||||| ||||||| |||||||||||||||||||| || |||||  |||||| | ||    | |||||||||||||||| | || ||||  ||||| ||    
T  529 taaagtgcgggtaatgggtgcgggtatgggcacttaagtacccatagggtatgtggaaaaacaataaagttgttgcccacaagggatacggactcggata 430  T
Q  203 cggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggta 263  Q
    ||| |||||| ||||||||||| |||  | || |||||||| ||||  ||| |||||||||    
T  429 cgggtattttatacaaacgcggttatgaaaatagatactattgtactatgctcattgggta 369  T

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Target: scaffold0062 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 104 - 263
Target Start/End: Original strand, 23923 - 24083
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaagg-tacgagctcgggta 202  Q
    ||||||| ||||||| |||||||||||||||||||| || |||||  |||||| | ||    | |||||||||||||||| | || ||||  ||||| ||    
T  23923 taaagtgcgggtaatgggtgcgggtatgggcacttaagtacccatagggtatgtggaaaaacaataaagttgttgcccacaagggatacggactcggata 24022  T
Q  203 cggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggta 263  Q
    ||| |||||| ||||||||||| |||  | || |||||||| ||||  ||| |||||||||    
T  24023 cgggtattttatacaaacgcggttatgaaaatagatactattgtactatgctcattgggta 24083  T

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Target: scaffold0062; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 104 - 263
Target Start/End: Original strand, 34091 - 34251
Alignment:
Q  104 taaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaagg-tacgagctcgggta 202  Q
    ||||||| ||||||| |||||||||||||||||||| || |||||  |||||| | ||    | |||||||||||||||| | || ||||  ||||| ||    
T  34091 taaagtgcgggtaatgggtgcgggtatgggcacttaagtacccatagggtatgtggaaaaacaataaagttgttgcccacaagggatacggactcggata 34190  T
Q  203 cggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggta 263  Q
    ||| |||||| ||||||||||| |||  | || |||||||| ||||  ||| |||||||||    
T  34191 cgggtattttatacaaacgcggttatgaaaatagatactattgtactatgctcattgggta 34251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 270
Target Start/End: Complemental strand, 250238 - 250060
Alignment:
Q  92 tcttttcatagataaagtgtgggtaattggtgcgggtatgggcacttaggtgcccattaggtatgagaaagggtactaaagttgttgcccacgaaggtac 191  Q
    |||||| |||| ||||||| || |||| ||| |  ||||| | ||||||  |||||| ||||||| | ||||  |||||| ||||||||||||   |||     
T  250238 tcttttgatagttaaagtgcggataatgggtacatgtatgagtacttagacgcccataaggtatggggaaggacactaaaattgttgcccacgcgagtat 250139  T
Q  192 gagctcgggtacggatattttttacaaacgcgggtatagagatggatactatagtaccctgcccattgggtacccattg 270  Q
    | | |||||||||  ||||||||||||||||  |||| | || |  |||||||||||||| || ||| | |||||||||    
T  250138 gggatcgggtacgagtattttttacaaacgcatgtatggggaagagtactatagtaccctacctattagatacccattg 250060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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