View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1377_high_7 (Length: 439)
Name: NF1377_high_7
Description: NF1377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1377_high_7 |
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Alignment Details
Target: chr6 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 75 - 429
Target Start/End: Original strand, 32951204 - 32951565
Alignment:
| Q |
75 |
gagttcgagcctcaatagcccacgccttttgacctctttgcactatcctcaacatataattctgcaggtatggagatgaatcaatattaaa-----gaat |
169 |
Q |
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| T |
32951204 |
gagttcgagccttattagcccacgccttttgagctctttgcactatcctcaacatataattctgcaggtatggagatgaatcaatattaaattaaagaat |
32951303 |
T |
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| Q |
170 |
tgaaaaaatgaagaaagaggctaaaggcaagccgg----tcgcaaaaacttgcctcatgatctaactcagaggcagatttgggttgattccttttgctaa |
265 |
Q |
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| T |
32951304 |
tgaaaaaatgaagaaagaggctaaaggcaggcaggctggtcgcaaaaacttgcctcatgatctaactcag--gcagatttgggttgattccttttgctaa |
32951401 |
T |
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| Q |
266 |
gaatatcggcaatgacggcatcatgaaaacgtttggcggatgtctctggctggtatatagattaacaataacatttatnnnnnnnnngtcatcgaatcaa |
365 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |
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| T |
32951402 |
gaatatcggcaatgacggcatcatgaaaacgtttggcggatgtctctggctggtatatagattaacaataacatttataaaaaaaaagtcatcaaatcaa |
32951501 |
T |
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| Q |
366 |
attaaaatcattgataacttagttagaattttcagaaaaacttacatcaacgtttaagcctttg |
429 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
32951502 |
attaaaagcattgataacttagttagaattttcagaaaaacttacatcaacttttaagcctttg |
32951565 |
T |
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