View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1377_low_10 (Length: 418)

Name: NF1377_low_10
Description: NF1377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1377_low_10
NF1377_low_10
[»] chr5 (33 HSPs)
chr5 (97-209)||(15593514-15593620)
chr5 (277-344)||(15593403-15593470)
chr5 (345-410)||(2477636-2477701)
chr5 (345-410)||(11361131-11361196)
chr5 (344-410)||(25398237-25398303)
chr5 (345-410)||(4892202-4892267)
chr5 (345-410)||(33584329-33584394)
chr5 (345-410)||(37321793-37321859)
chr5 (345-410)||(6043511-6043576)
chr5 (345-408)||(3362778-3362841)
chr5 (345-408)||(38899728-38899791)
chr5 (349-410)||(8145379-8145440)
chr5 (345-410)||(14138668-14138733)
chr5 (345-410)||(22913054-22913119)
chr5 (345-408)||(12850801-12850864)
chr5 (345-410)||(3522006-3522071)
chr5 (345-410)||(4434007-4434072)
chr5 (345-410)||(17545685-17545750)
chr5 (344-410)||(12614733-12614799)
chr5 (349-410)||(3521806-3521866)
chr5 (349-410)||(6043311-6043371)
chr5 (357-410)||(10458409-10458462)
chr5 (349-400)||(27481830-27481881)
chr5 (349-410)||(4892408-4892468)
chr5 (349-410)||(12614536-12614597)
chr5 (349-410)||(33584128-33584188)
chr5 (349-408)||(3362987-3363045)
chr5 (349-408)||(12851010-12851068)
chr5 (349-408)||(38899524-38899583)
chr5 (349-410)||(8145579-8145639)
chr5 (345-382)||(13664642-13664679)
chr5 (349-410)||(22912856-22912916)
chr5 (349-410)||(25398444-25398504)
[»] chr8 (51 HSPs)
chr8 (345-410)||(32393858-32393923)
chr8 (344-410)||(34665381-34665447)
chr8 (345-410)||(1645965-1646030)
chr8 (345-410)||(32064745-32064810)
chr8 (345-410)||(35353041-35353106)
chr8 (346-410)||(14128865-14128929)
chr8 (344-410)||(20091801-20091867)
chr8 (344-410)||(24211553-24211619)
chr8 (345-410)||(17841850-17841915)
chr8 (349-410)||(37986055-37986116)
chr8 (345-410)||(40780129-40780194)
chr8 (345-410)||(42755042-42755107)
chr8 (345-409)||(15187560-15187624)
chr8 (344-410)||(38016971-38017036)
chr8 (345-410)||(6108233-6108298)
chr8 (345-410)||(26042116-26042181)
chr8 (345-410)||(37132658-37132723)
chr8 (345-410)||(31347782-31347847)
chr8 (345-410)||(39772801-39772866)
chr8 (345-410)||(41819778-41819843)
chr8 (348-410)||(8453837-8453899)
chr8 (345-410)||(7017865-7017930)
chr8 (346-410)||(27782117-27782181)
chr8 (345-410)||(30835047-30835111)
chr8 (350-410)||(25581239-25581299)
chr8 (355-410)||(7021988-7022043)
chr8 (349-410)||(3890413-3890474)
chr8 (345-410)||(27835453-27835518)
chr8 (349-410)||(1503642-1503702)
chr8 (349-410)||(3596840-3596900)
chr8 (349-410)||(17841649-17841709)
chr8 (349-410)||(26041912-26041972)
chr8 (349-410)||(32064952-32065012)
chr8 (349-410)||(40779928-40779988)
chr8 (349-410)||(42754841-42754901)
chr8 (357-408)||(1886621-1886672)
chr8 (357-408)||(30834862-30834913)
chr8 (349-399)||(24844869-24844919)
chr8 (356-410)||(35353247-35353300)
chr8 (373-410)||(3890616-3890653)
chr8 (349-410)||(6108032-6108092)
chr8 (349-410)||(10044554-10044614)
chr8 (349-410)||(14129065-14129125)
chr8 (349-410)||(20091600-20091660)
chr8 (357-410)||(24844667-24844720)
chr8 (345-386)||(30055543-30055584)
chr8 (349-410)||(31347575-31347635)
chr8 (349-410)||(34665587-34665647)
chr8 (349-410)||(37132479-37132540)
chr8 (349-410)||(37985855-37985915)
chr8 (373-409)||(3597042-3597078)
[»] chr6 (22 HSPs)
chr6 (345-410)||(6127275-6127340)
chr6 (345-410)||(23291084-23291149)
chr6 (345-410)||(17705465-17705530)
chr6 (345-410)||(33695327-33695392)
chr6 (345-410)||(33696696-33696761)
chr6 (345-410)||(18365573-18365638)
chr6 (345-410)||(18370837-18370902)
chr6 (344-410)||(6031741-6031807)
chr6 (345-410)||(17176021-17176086)
chr6 (345-410)||(25986930-25986995)
chr6 (345-410)||(28675148-28675213)
chr6 (345-409)||(18889698-18889761)
chr6 (348-410)||(8515725-8515787)
chr6 (349-409)||(29693652-29693712)
chr6 (351-410)||(11548588-11548647)
chr6 (345-410)||(2309423-2309488)
chr6 (356-410)||(32702216-32702270)
chr6 (345-410)||(9752245-9752309)
chr6 (349-410)||(33696903-33696963)
chr6 (357-410)||(582534-582588)
chr6 (349-410)||(34238886-34238946)
chr6 (349-409)||(32702412-32702471)
[»] chr3 (44 HSPs)
chr3 (345-410)||(2754717-2754782)
chr3 (345-410)||(3574527-3574592)
chr3 (345-410)||(37217053-37217118)
chr3 (345-409)||(11347268-11347332)
chr3 (345-410)||(3456064-3456129)
chr3 (345-410)||(48160905-48160970)
chr3 (345-410)||(6041884-6041949)
chr3 (345-410)||(19650900-19650965)
chr3 (345-399)||(42297353-42297407)
chr3 (345-410)||(3137414-3137479)
chr3 (345-410)||(8320584-8320649)
chr3 (345-410)||(22426344-22426409)
chr3 (345-410)||(30385011-30385076)
chr3 (345-410)||(33113793-33113858)
chr3 (345-410)||(33145713-33145777)
chr3 (345-410)||(37522053-37522118)
chr3 (345-410)||(34482910-34482975)
chr3 (345-410)||(36865027-36865092)
chr3 (346-410)||(9797029-9797093)
chr3 (356-399)||(42921154-42921197)
chr3 (345-410)||(33839531-33839596)
chr3 (345-410)||(8362045-8362110)
chr3 (345-410)||(24343547-24343612)
chr3 (349-410)||(37522259-37522319)
chr3 (345-406)||(41224233-41224294)
chr3 (357-409)||(47738117-47738169)
chr3 (345-408)||(26612785-26612848)
chr3 (348-382)||(40327878-40327912)
chr3 (349-410)||(3137213-3137273)
chr3 (349-410)||(34482687-34482747)
chr3 (349-410)||(40328037-40328098)
chr3 (349-402)||(42921339-42921392)
chr3 (357-410)||(47738317-47738370)
chr3 (354-410)||(33839741-33839797)
chr3 (345-376)||(47402630-47402661)
chr3 (349-410)||(2754925-2754985)
chr3 (349-410)||(3089625-3089685)
chr3 (349-410)||(22426144-22426204)
chr3 (349-410)||(30385606-30385666)
chr3 (349-410)||(33114000-33114060)
chr3 (349-410)||(36864831-36864892)
chr3 (349-410)||(41224440-41224500)
chr3 (373-410)||(41883223-41883260)
chr3 (357-410)||(46919100-46919153)
[»] chr2 (23 HSPs)
chr2 (345-410)||(35160757-35160822)
chr2 (346-410)||(10661888-10661952)
chr2 (345-410)||(9293576-9293641)
chr2 (345-410)||(21936081-21936146)
chr2 (345-410)||(23268062-23268127)
chr2 (345-410)||(33380207-33380272)
chr2 (345-409)||(13354846-13354910)
chr2 (348-410)||(31174834-31174896)
chr2 (345-410)||(7475508-7475573)
chr2 (345-410)||(14941366-14941431)
chr2 (345-410)||(43330912-43330977)
chr2 (347-410)||(21393688-21393751)
chr2 (345-410)||(9723405-9723470)
chr2 (373-410)||(3989104-3989141)
chr2 (349-410)||(23267861-23267921)
chr2 (345-410)||(27847632-27847697)
chr2 (357-410)||(9723612-9723665)
chr2 (357-410)||(22591494-22591547)
chr2 (349-410)||(22592918-22592979)
chr2 (349-410)||(33380413-33380473)
chr2 (349-410)||(35160965-35161025)
chr2 (348-382)||(40262714-40262748)
chr2 (349-410)||(10662094-10662154)
[»] chr4 (44 HSPs)
chr4 (346-410)||(7745112-7745176)
chr4 (345-410)||(10442789-10442854)
chr4 (345-410)||(22199261-22199326)
chr4 (345-410)||(31078819-31078884)
chr4 (345-410)||(49387888-49387953)
chr4 (344-408)||(36072946-36073010)
chr4 (345-410)||(2624837-2624902)
chr4 (345-410)||(21802322-21802387)
chr4 (345-410)||(23964465-23964530)
chr4 (345-410)||(24128239-24128304)
chr4 (345-410)||(33530688-33530753)
chr4 (345-410)||(47290066-47290131)
chr4 (345-410)||(50156578-50156643)
chr4 (345-408)||(4751446-4751509)
chr4 (345-410)||(24392667-24392732)
chr4 (349-410)||(36073354-36073415)
chr4 (345-410)||(44893426-44893491)
chr4 (345-410)||(53123030-53123096)
chr4 (345-410)||(46441844-46441909)
chr4 (351-410)||(42671675-42671734)
chr4 (345-407)||(37934944-37935006)
chr4 (345-410)||(44893213-44893279)
chr4 (357-410)||(37219837-37219890)
chr4 (349-410)||(25063373-25063434)
chr4 (349-410)||(44893012-44893072)
chr4 (349-410)||(44893632-44893692)
chr4 (373-410)||(9088898-9088935)
chr4 (349-410)||(9089076-9089136)
chr4 (349-410)||(36073555-36073615)
chr4 (349-410)||(46442050-46442110)
chr4 (349-410)||(53123237-53123297)
chr4 (349-409)||(17655637-17655697)
chr4 (349-409)||(24128446-24128505)
chr4 (358-410)||(36073743-36073795)
chr4 (349-408)||(4751655-4751713)
chr4 (349-410)||(10442586-10442646)
chr4 (349-410)||(11314050-11314111)
chr4 (377-410)||(17655462-17655495)
chr4 (357-410)||(23964271-23964323)
chr4 (349-410)||(24392880-24392940)
chr4 (349-410)||(31078618-31078678)
chr4 (357-410)||(42671874-42671927)
chr4 (349-410)||(47290272-47290332)
chr4 (362-410)||(44744452-44744500)
[»] chr7 (25 HSPs)
chr7 (345-408)||(24394972-24395035)
chr7 (344-410)||(42611810-42611876)
chr7 (345-410)||(3961979-3962044)
chr7 (345-410)||(4974735-4974800)
chr7 (345-410)||(15577850-15577915)
chr7 (345-410)||(34482835-34482900)
chr7 (345-410)||(45637712-45637777)
chr7 (345-410)||(15329273-15329338)
chr7 (345-410)||(25167850-25167915)
chr7 (345-410)||(37477080-37477145)
chr7 (345-410)||(48880927-48880992)
chr7 (345-410)||(18036978-18037043)
chr7 (345-410)||(35444558-35444623)
chr7 (348-409)||(36790467-36790528)
chr7 (349-410)||(29737143-29737204)
chr7 (345-410)||(15238382-15238447)
chr7 (345-398)||(20010109-20010162)
chr7 (345-410)||(42696083-42696148)
chr7 (373-410)||(30848597-30848634)
chr7 (349-410)||(25167655-25167715)
chr7 (349-410)||(48880726-48880786)
chr7 (357-410)||(29737350-29737403)
chr7 (349-410)||(30848775-30848835)
chr7 (349-410)||(37476879-37476939)
chr7 (349-410)||(42612017-42612077)
[»] scaffold0204 (2 HSPs)
scaffold0204 (345-410)||(4396-4461)
scaffold0204 (349-410)||(4602-4662)
[»] chr1 (37 HSPs)
chr1 (345-410)||(18404442-18404507)
chr1 (345-410)||(25463676-25463741)
chr1 (345-410)||(40214988-40215053)
chr1 (348-410)||(3559620-3559682)
chr1 (344-410)||(44094697-44094763)
chr1 (345-410)||(9910293-9910358)
chr1 (349-410)||(16045798-16045859)
chr1 (345-410)||(41876442-41876507)
chr1 (345-410)||(19015404-19015469)
chr1 (345-410)||(36966708-36966773)
chr1 (345-410)||(37821834-37821899)
chr1 (345-410)||(6883487-6883552)
chr1 (345-408)||(32000269-32000332)
chr1 (345-410)||(25973414-25973478)
chr1 (345-410)||(40273702-40273767)
chr1 (345-410)||(27523255-27523322)
chr1 (349-410)||(18404654-18404714)
chr1 (349-410)||(19015610-19015670)
chr1 (345-382)||(34519758-34519795)
chr1 (357-410)||(44690828-44690881)
chr1 (345-382)||(51620980-51621017)
chr1 (349-410)||(51737711-51737771)
chr1 (345-409)||(44691030-44691094)
chr1 (349-407)||(6883696-6883753)
chr1 (349-407)||(52064376-52064434)
chr1 (357-410)||(9910098-9910150)
chr1 (349-410)||(20304929-20304989)
chr1 (349-410)||(25973613-25973673)
chr1 (349-410)||(32000065-32000125)
chr1 (349-410)||(33786430-33786490)
chr1 (349-410)||(33786635-33786695)
chr1 (349-410)||(37821633-37821693)
chr1 (349-410)||(40215194-40215254)
chr1 (349-410)||(40273914-40273974)
chr1 (349-410)||(41876241-41876301)
chr1 (345-382)||(52329319-52329356)
chr1 (343-375)||(28391408-28391440)
[»] scaffold0665 (1 HSPs)
scaffold0665 (346-410)||(3069-3133)
[»] scaffold0085 (1 HSPs)
scaffold0085 (344-410)||(47849-47915)
[»] scaffold0471 (2 HSPs)
scaffold0471 (345-410)||(12842-12907)
scaffold0471 (349-409)||(13049-13108)
[»] scaffold0178 (2 HSPs)
scaffold0178 (345-410)||(11621-11686)
scaffold0178 (357-410)||(11827-11879)
[»] scaffold0096 (1 HSPs)
scaffold0096 (345-410)||(41011-41076)
[»] scaffold0228 (5 HSPs)
scaffold0228 (356-410)||(8413-8467)
scaffold0228 (356-410)||(15995-16049)
scaffold0228 (356-410)||(25947-26001)
scaffold0228 (349-410)||(16190-16250)
scaffold0228 (349-410)||(26142-26202)


Alignment Details
Target: chr5 (Bit Score: 86; Significance: 6e-41; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 97 - 209
Target Start/End: Complemental strand, 15593620 - 15593514
Alignment:
Q  97 aaaaagacattactaacacggtggctcccaaaaggttaattaactttaacaccgtgcgaaataaccaaaaaacaagcgaaatatgaattattttgtatcc 196  Q
    |||||||||||||||||| |||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15593620 aaaaagacattactaacatggtggctcccaaaaggttaattaac------accgtgcgaaataaccaaaaaacaagcgaaatatgaattattttgtatcc 15593527  T
Q  197 aagaattttgttg 209  Q
    |||||||||||||    
T  15593526 aagaattttgttg 15593514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 15593470 - 15593403
Alignment:
Q  277 catttgagtgctggagatttaatatcttgctcaacaacactcaactttttcatcaagaataaaaactc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15593470 catttgagtgctggagatttaatatcttgctcaacaacactcaactttttcatcaagaataaaaactc 15593403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 2477636 - 2477701
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2477636 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 11361196 - 11361131
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11361196 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 11361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 25398237 - 25398303
Alignment:
Q  344 cgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25398237 cgagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 25398303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 4892202 - 4892267
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4892202 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 33584394 - 33584329
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33584394 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 33584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 37321859 - 37321793
Alignment:
Q  345 gagcaatgctatatatc-aagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37321859 gagcaatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 6043576 - 6043511
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  6043576 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatc 6043511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 3362778 - 3362841
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  3362778 gagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 3362841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 345 - 408
Target Start/End: Complemental strand, 38899791 - 38899728
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  38899791 gagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 38899728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 8145379 - 8145440
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8145379 aatgttatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8145440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 14138668 - 14138733
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  14138668 gagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatc 14138733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 22913119 - 22913054
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||    
T  22913119 gagcaatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatc 22913054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 12850801 - 12850864
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  12850801 gagcaatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataa 12850864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 3522071 - 3522006
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| |||||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  3522071 gagcaatgttatatatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatc 3522006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 4434072 - 4434007
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||||||| ||||||||||||||    
T  4434072 gagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatc 4434007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 17545750 - 17545685
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||| | ||| ||||||||| || |||||||||||||||||||||||    
T  17545750 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 17545685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 410
Target Start/End: Complemental strand, 12614799 - 12614733
Alignment:
Q  344 cgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||| ||||||||||||||  || |||||||||||| || |||||||    
T  12614799 cgagcaatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatc 12614733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 3521806 - 3521866
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  3521806 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 3521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 6043311 - 6043371
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  6043311 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 6043371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 10458409 - 10458462
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||| ||||||||||||||| || ||||||||||||||| |||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatc 10458462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 400
Target Start/End: Original strand, 27481830 - 27481881
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgg 400  Q
    |||||||| ||| |||||||||||||||||||||| || |||||||||||||    
T  27481830 aatgctatgtattaagaaagattttatcaagaaaaattcaagaatgacatgg 27481881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 4892468 - 4892408
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  4892468 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 4892408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 12614536 - 12614597
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||| | ||||||||||| |||  |||||||||||||||||| |||||||    
T  12614536 aatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatc 12614597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 33584128 - 33584188
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  33584128 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 408
Target Start/End: Complemental strand, 3363045 - 3362987
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||    
T  3363045 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataa 3362987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 408
Target Start/End: Complemental strand, 12851068 - 12851010
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||    
T  12851068 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataa 12851010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 408
Target Start/End: Original strand, 38899524 - 38899583
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    ||||||| |||||||||| |||||||| || |||| || ||||||||||||||| |||||    
T  38899524 aatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataa 38899583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 8145639 - 8145579
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  8145639 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 8145579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 13664642 - 13664679
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaa 382  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  13664642 gagcaatgttatatattaagaaagattttatcaagaaa 13664679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 22912856 - 22912916
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| ||||| |||||||||  || ||||||||||||||| |||||||    
T  22912856 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 22912916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 25398504 - 25398444
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || || |||||||||||| |||||||    
T  25398504 aatgctagatatcaagaatgattttat-aagaaaaattcaacaatgacatggcacaataatc 25398444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 32393858 - 32393923
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32393858 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 32393923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 34665381 - 34665447
Alignment:
Q  344 cgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34665381 cgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 34665447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 1646030 - 1645965
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1646030 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatc 1645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 32064745 - 32064810
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32064745 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 32064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 35353041 - 35353106
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35353041 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 35353106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 14128865 - 14128929
Alignment:
Q  346 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14128865 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 14128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 344 - 410
Target Start/End: Complemental strand, 20091867 - 20091801
Alignment:
Q  344 cgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20091867 cgagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 20091801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 344 - 410
Target Start/End: Complemental strand, 24211619 - 24211553
Alignment:
Q  344 cgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  24211619 cgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatc 24211553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 17841915 - 17841850
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  17841915 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 17841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 37986116 - 37986055
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37986116 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 37986055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 40780194 - 40780129
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  40780194 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 40780129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 42755107 - 42755042
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42755107 gagcaatgatatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 345 - 409
Target Start/End: Original strand, 15187560 - 15187624
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 409  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  15187560 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 15187624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 38016971 - 38017036
Alignment:
Q  344 cgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38016971 cgagcaat-ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 38017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 6108298 - 6108233
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  6108298 gagcaatgttatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 6108233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 26042181 - 26042116
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  26042181 gagcaatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 26042116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 37132723 - 37132658
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  37132723 gagcaatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatc 37132658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 31347847 - 31347782
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||| ||||| ||||||||| || |||||||||||||||||||||||    
T  31347847 gagcaatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatc 31347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 39772866 - 39772801
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  39772866 gagcaatgttatatatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatc 39772801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 41819843 - 41819778
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  41819843 gagcaatgttatatatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatc 41819778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 8453837 - 8453899
Alignment:
Q  348 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||| || |||||||    
T  8453837 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatc 8453899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 7017930 - 7017865
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||| |||||||||| | ||||||| || |||||||||||||||||||||||    
T  7017930 gagcaatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatc 7017865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 27782181 - 27782117
Alignment:
Q  346 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||| ||||||||||||||  || || ||||||||||||||||||||    
T  27782181 agcaatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatc 27782117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 30835111 - 30835047
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| ||||||||||||||||||||||| | |||| || |||||||||||||||||||||||    
T  30835111 gagcaatgttatatatcaagaaagattttatcga-aaaaattcaagaatgacatggcagaataatc 30835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 25581299 - 25581239
Alignment:
Q  350 atgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||| |||||  |||||||||| ||||||||||||||| |||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatc 25581239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 410
Target Start/End: Original strand, 7021988 - 7022043
Alignment:
Q  355 atatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||    
T  7021988 atatatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatc 7022043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 3890413 - 3890474
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||||||||||  || |||||||| ||||||||||||||    
T  3890413 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatc 3890474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 27835518 - 27835453
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||| |||||| |||| ||||||| || ||||||||||||| | |||||||    
T  27835518 gagcaatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatc 27835453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 1503642 - 1503702
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  1503642 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 1503702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 3596840 - 3596900
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  3596840 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatc 3596900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 17841649 - 17841709
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  17841649 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 17841709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 26041912 - 26041972
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  26041912 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 32065012 - 32064952
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  32065012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataatc 32064952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 40779928 - 40779988
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  40779928 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 40779988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 42754841 - 42754901
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||| | |||||||    
T  42754841 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggtacaataatc 42754901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 408
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    |||||||||| |||||||||||||||  || ||||||||| |||||||||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 357 - 408
Target Start/End: Original strand, 30834862 - 30834913
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    |||||||||| |||||||||||||||  || |||||||||||| ||||||||    
T  30834862 atatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataa 30834913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 24844919 - 24844869
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatg 399  Q
    ||||||| ||||||||||| ||||||| ||||||| || ||||||||||||    
T  24844919 aatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatg 24844869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 35353300 - 35353247
Alignment:
Q  356 tatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  35353300 tatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35353247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 373 - 410
Target Start/End: Complemental strand, 3890653 - 3890616
Alignment:
Q  373 tatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||| || |||||||||||||||||||||||    
T  3890653 tatcaagaaaaattcaagaatgacatggcagaataatc 3890616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 6108032 - 6108092
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||    
T  6108032 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 6108092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 10044614 - 10044554
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  10044614 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 10044554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 14129125 - 14129065
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  14129125 aatgctagatatcaagaatgattttat-aagaaatattcaagaatgacatggcacaataatc 14129065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 20091600 - 20091660
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  20091600 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 20091660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 24844667 - 24844720
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| || |||||||||||||||  |||||||||| ||||||| |||||||    
T  24844667 atatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatc 24844720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 386
Target Start/End: Original strand, 30055543 - 30055584
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattt 386  Q
    ||||||||||||||| |||| ||||||||||||| |||||||    
T  30055543 gagcaatgctatataccaaggaagattttatcaaaaaaattt 30055584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 31347575 - 31347635
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| ||||| |||||||||  || ||||||||||||||| |||||||    
T  31347575 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 31347635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 34665647 - 34665587
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  34665647 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 34665587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 37132479 - 37132540
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||||||||||  || | |||||||||| || |||||||    
T  37132479 aatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatc 37132540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 37985855 - 37985915
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  37985855 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 37985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 3597078 - 3597042
Alignment:
Q  373 tatcaagaaaattttaagaatgacatggcagaataat 409  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  3597078 tatcaagaaagtttcaagaatgacatggcagaataat 3597042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 6127275 - 6127340
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6127275 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 6127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 23291149 - 23291084
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23291149 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 23291084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 17705530 - 17705465
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17705530 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 33695392 - 33695327
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33695392 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33695327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 33696696 - 33696761
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33696696 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 18365638 - 18365573
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  18365638 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18365573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 18370902 - 18370837
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  18370902 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18370837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 410
Target Start/End: Complemental strand, 6031807 - 6031741
Alignment:
Q  344 cgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  6031807 cgagcaatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatc 6031741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 17176086 - 17176021
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  17176086 gagcaatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatc 17176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 25986930 - 25986995
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||    
T  25986930 gagcaatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatc 25986995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 28675148 - 28675213
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  28675148 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatc 28675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 409
Target Start/End: Complemental strand, 18889761 - 18889698
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 409  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  18889761 gagcaatgctatatatcaagaaagattt-atcaagaaaatttcaagaatgacatggcagaataat 18889698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 8515787 - 8515725
Alignment:
Q  348 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  8515787 caatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatc 8515725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 29693712 - 29693652
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 409  Q
    ||||||| |||||||||| |||||||||||||||  |||||||||||||||||||||||||    
T  29693712 aatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataat 29693652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 351 - 410
Target Start/End: Complemental strand, 11548647 - 11548588
Alignment:
Q  351 tgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||| ||||| ||||||||| || |||||||||||||||||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatc 11548588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 2309488 - 2309423
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| ||||||||||||||||||||||||| |   ||||||||||| |||||||||||||||    
T  2309488 gagcaatgttatatatcaagaaagattttatcaaaatttttttaagaatggcatggcagaataatc 2309423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 32702216 - 32702270
Alignment:
Q  356 tatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||    
T  32702216 tatatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatc 32702270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 9752309 - 9752245
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| |||||||||||||| | || |||||||||| || |||||||| ||||||||||||||    
T  9752309 gagcaatgttatatatcaagaaaaaatt-atcaagaaaaattcaagaatgatatggcagaataatc 9752245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 33696963 - 33696903
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  33696963 aatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatc 33696903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 582534 - 582588
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacat-ggcagaataatc 410  Q
    |||||||||| |||||||| ||||||| ||||||||||| || ||||||||||||    
T  582534 atatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatc 582588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 34238886 - 34238946
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||||||||| | || |||||||||||| || |||||||    
T  34238886 aatgctagatatcaagaatgattttatcaagaaga-ttcaagaatgacatgacacaataatc 34238946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 32702471 - 32702412
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 409  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || ||||||    
T  32702471 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataat 32702412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 5e-29; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 2754717 - 2754782
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2754717 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 3574592 - 3574527
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3574592 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 3574527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 37217118 - 37217053
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37217118 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 345 - 409
Target Start/End: Original strand, 11347268 - 11347332
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 409  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11347268 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 11347332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 3456064 - 3456129
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3456064 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 3456129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 48160905 - 48160970
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48160905 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 48160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 6041884 - 6041949
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  6041884 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 6041949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 19650965 - 19650900
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19650965 gagcaatgttatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 19650900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 42297353 - 42297407
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatg 399  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42297353 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatg 42297407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 3137479 - 3137414
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  3137479 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatc 3137414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 8320649 - 8320584
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  8320649 gagcaatgttatatatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatc 8320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 22426409 - 22426344
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22426409 gagcaatgttatatattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatc 22426344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 30385011 - 30385076
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  30385011 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatc 30385076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 33113793 - 33113858
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  33113793 gagcaatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatc 33113858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 33145713 - 33145777
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  33145713 gagcaatgctatatatcaagaaagattttattaa-aaaattttaagaatgacatggcagaataatc 33145777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 37522053 - 37522118
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  37522053 gagcaatactatatatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatc 37522118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 34482975 - 34482910
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| |||||||||    
T  34482975 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatc 34482910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 36865092 - 36865027
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  36865092 gagcaatgctatatattaaggaagattttattaagaaaattttaagaatgacatggtagaataatc 36865027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 9797093 - 9797029
Alignment:
Q  346 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||||||||    
T  9797093 agcaatgttatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 9797029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 356 - 399
Target Start/End: Original strand, 42921154 - 42921197
Alignment:
Q  356 tatatcaagaaagattttatcaagaaaattttaagaatgacatg 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  42921154 tatatcaagaaagattttatcaagaaaattttaagaatgacatg 42921197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 33839531 - 33839596
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| ||||||| ||||||||||||||||| |||| ||||||||| ||||| ||||||||||    
T  33839531 gagcaatgttatatattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatc 33839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 8362110 - 8362045
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||| |   | ||||||||| || |||||||||||||||||||||||    
T  8362110 gagcaatgctatatatcaagaaaaaaaatttcaagaaaaattcaagaatgacatggcagaataatc 8362045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 24343547 - 24343612
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||| |||||||||||||||||||||| || || | | | ||||||||||||||    
T  24343547 gagcaatgctatatattaagaaagattttatcaagaaaaattcaaaattaatatggcagaataatc 24343612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 37522319 - 37522259
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  37522319 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatc 37522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 41224233 - 41224294
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaat 406  Q
    ||||| |||||||||| |||||||||||| ||||||||| || ||||||||||||| |||||    
T  41224233 gagcactgctatatattaagaaagattttctcaagaaaaattcaagaatgacatggtagaat 41224294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 409
Target Start/End: Original strand, 47738117 - 47738169
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 409  Q
    ||||||||||||||||||||||||||  || |||||||| |||||||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataat 47738169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 26612785 - 26612848
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    |||||||  |||||||||| ||||||||||| || |||| || |||||||||||||||||||||    
T  26612785 gagcaatattatatatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataa 26612848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 382
Target Start/End: Original strand, 40327878 - 40327912
Alignment:
Q  348 caatgctatatatcaagaaagattttatcaagaaa 382  Q
    |||||||||||||||||||||||||||||||||||    
T  40327878 caatgctatatatcaagaaagattttatcaagaaa 40327912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 3137213 - 3137273
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  3137213 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 3137273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 34482687 - 34482747
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  34482687 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 34482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 40328098 - 40328037
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||||||||||  || |||||||||||| || |||||||    
T  40328098 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 40328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 402
Target Start/End: Complemental strand, 42921392 - 42921339
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggca 402  Q
    ||||||| |||| ||||| |||||||||||||||  ||||||||||||||||||    
T  42921392 aatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggca 42921339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 47738370 - 47738317
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||| |||||||||||||||  || ||||||||||||||| |||||||    
T  47738370 atatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatc 47738317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 33839797 - 33839741
Alignment:
Q  354 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||| |||||||||||||||  || |||||||||||| || |||||||    
T  33839797 tatatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 33839741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 376
Target Start/End: Complemental strand, 47402661 - 47402630
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatc 376  Q
    ||||||||||||||||||||||||||||||||    
T  47402661 gagcaatgctatatatcaagaaagattttatc 47402630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 2754985 - 2754925
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| ||||||||||  ||||||| ||||||  |||||||||||||||||| |||||||    
T  2754985 aatgctagatatcaagaatcattttat-aagaaagatttaagaatgacatggcacaataatc 2754925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 3089685 - 3089625
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| |||||||    
T  3089685 aatgctagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaataatc 3089625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 22426144 - 22426204
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  22426144 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 22426204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 30385666 - 30385606
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  30385666 aatgctaaatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 30385606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 33114060 - 33114000
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  33114060 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 33114000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 36864831 - 36864892
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| ||||||||||| |||  || |||||||||||| || |||||||    
T  36864831 aatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatc 36864892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 41224500 - 41224440
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| ||||| |||||||||  || ||||||||||||||| |||||||    
T  41224500 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatc 41224440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 373 - 410
Target Start/End: Complemental strand, 41883260 - 41883223
Alignment:
Q  373 tatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||| || |||||||||||||||||||||||    
T  41883260 tatcaagaaaaattcaagaatgacatggcagaataatc 41883223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 46919153 - 46919100
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||| ||||||||||| |||  || || ||||||||||||||||||||    
T  46919153 atatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatc 46919100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 35160757 - 35160822
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160757 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 35160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 10661888 - 10661952
Alignment:
Q  346 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10661888 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 10661952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 9293641 - 9293576
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  9293641 gagcaatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatc 9293576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 21936081 - 21936146
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  21936081 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 21936146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 23268127 - 23268062
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  23268127 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 23268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 33380207 - 33380272
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  33380207 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatc 33380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 409
Target Start/End: Original strand, 13354846 - 13354910
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 409  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  13354846 gagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 13354910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 31174896 - 31174834
Alignment:
Q  348 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  31174896 caatgttatatatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatc 31174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 7475573 - 7475508
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||  |||||||||    
T  7475573 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatc 7475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 14941431 - 14941366
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||| ||||||  || |||||||||||||||||||||||    
T  14941431 gagcaatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatc 14941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 43330912 - 43330977
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||| |||| || |||||||||||||||||||||||    
T  43330912 gagcaatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatc 43330977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 410
Target Start/End: Complemental strand, 21393751 - 21393688
Alignment:
Q  347 gcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||    
T  21393751 gcaatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatc 21393688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 9723405 - 9723470
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||| |||||||||||||| ||||||  ||||||||||||||| ||||||||||    
T  9723405 gagcaatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatc 9723470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 373 - 410
Target Start/End: Original strand, 3989104 - 3989141
Alignment:
Q  373 tatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3989104 tatcaagaaaattttaagaatgacatggcagaataatc 3989141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 23267861 - 23267921
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  23267861 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 23267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 27847632 - 27847697
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||| ||||| |||||||||||||| ||||||  || |||||||||||| ||||||||||    
T  27847632 gagcaatgctgtatataaagaaagattttattaagaaagattcaagaatgacatgacagaataatc 27847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 9723665 - 9723612
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||| ||||| |||||||||  ||||||||||||||| ||||||||||    
T  9723665 atatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatc 9723612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||| || |||| || |||||||| ||||||||||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 22592979 - 22592918
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||||||||||  || |||||||||||| || |||||||    
T  22592979 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 22592918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 33380473 - 33380413
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  33380473 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 35161025 - 35160965
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  35161025 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35160965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 382
Target Start/End: Complemental strand, 40262748 - 40262714
Alignment:
Q  348 caatgctatatatcaagaaagattttatcaagaaa 382  Q
    ||||| |||||||||||||||||||||||||||||    
T  40262748 caatgttatatatcaagaaagattttatcaagaaa 40262714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 10662154 - 10662094
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||    
T  10662154 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 10662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 7745176 - 7745112
Alignment:
Q  346 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7745176 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 7745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 10442854 - 10442789
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10442854 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 10442789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 22199261 - 22199326
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22199261 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 22199326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 31078884 - 31078819
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31078884 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 31078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 49387953 - 49387888
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49387953 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 49387888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 36072946 - 36073010
Alignment:
Q  344 cgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36072946 cgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataa 36073010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 2624837 - 2624902
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  2624837 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatc 2624902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 21802387 - 21802322
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  21802387 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 21802322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 23964530 - 23964465
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23964530 gagcaatgttatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 23964465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 24128239 - 24128304
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  24128239 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 24128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 33530753 - 33530688
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  33530753 gagcaatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatc 33530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 47290066 - 47290131
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  47290066 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 47290131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 50156643 - 50156578
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50156643 gagcaatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 50156578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 4751446 - 4751509
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  4751446 gagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 4751509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 24392667 - 24392732
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||    
T  24392667 gagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 24392732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 36073354 - 36073415
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  36073354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 36073415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 44893426 - 44893491
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  44893426 gagcaatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatc 44893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 53123030 - 53123096
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatc-aagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||    
T  53123030 gagcaatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatc 53123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 46441844 - 46441909
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| |||||||    
T  46441844 gagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatc 46441909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 42671675 - 42671734
Alignment:
Q  351 tgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatc 42671734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 407
Target Start/End: Complemental strand, 37935006 - 37934944
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaata 407  Q
    ||||||||||||||||||| |||||||||||||| ||||| | ||||||||||||| ||||||    
T  37935006 gagcaatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaata 37934944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 44893279 - 44893213
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaatttt-aagaatgacatggcagaataatc 410  Q
    |||||||||||||||| |||||||||||| |||| |||| ||| |||||||||||||||||||||||    
T  44893279 gagcaatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatc 44893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 37219890 - 37219837
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  37219890 atatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatc 37219837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 25063373 - 25063434
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||||||||||  || ||||||||||||| |||||||||    
T  25063373 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatc 25063434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 44893012 - 44893072
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  44893012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 44893692 - 44893632
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  44893692 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 373 - 410
Target Start/End: Original strand, 9088898 - 9088935
Alignment:
Q  373 tatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||| |||||||||||||||||||||||    
T  9088898 tatcaagaaaatttcaagaatgacatggcagaataatc 9088935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 9089136 - 9089076
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  9089136 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 36073615 - 36073555
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  36073615 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 36073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 46442110 - 46442050
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  46442110 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 46442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 53123297 - 53123237
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  53123297 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 53123237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 17655697 - 17655637
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 409  Q
    ||||||| |||| ||||| |||||||||||||||  ||||||||||||||| || ||||||    
T  17655697 aatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataat 17655637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 24128505 - 24128446
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 409  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || ||||||    
T  24128505 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 24128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 36073795 - 36073743
Alignment:
Q  358 tatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||| ||||||  ||||||||||||||| || |||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatc 36073743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 408
Target Start/End: Complemental strand, 4751713 - 4751655
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    ||||||| ||||||||||  ||||||| ||||||| |||||||||||||||||| |||||    
T  4751713 aatgctagatatcaagaataattttat-aagaaaaatttaagaatgacatggcacaataa 4751655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 10442586 - 10442646
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  10442586 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 10442646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 11314050 - 11314111
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||||||||||  |  |||||||||||| || |||||||    
T  11314050 aatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatc 11314111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 377 - 410
Target Start/End: Original strand, 17655462 - 17655495
Alignment:
Q  377 aagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||| |||||||||||||||||||||||    
T  17655462 aagaaaatttcaagaatgacatggcagaataatc 17655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 23964271 - 23964323
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  23964271 atatcaagaatgattttat-aagaaagatttaagaatgacatggcataataatc 23964323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 24392940 - 24392880
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| ||||| |||||||||  |||||||||||||| ||| |||||||    
T  24392940 aatgctagatatcaagaatgattt-atcaagaaatatttaagaatgacatagcacaataatc 24392880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 31078618 - 31078678
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| || ||||||  ||||||||||||||| |||||||    
T  31078618 aatgctagatatcaagaatgattttataaaaaaaattc-aagaatgacatggcacaataatc 31078678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 42671927 - 42671874
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||| |||||||||||||||  || |||||||||||| || |||||||    
T  42671927 atatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatc 42671874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 47290332 - 47290272
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||| | |||||||    
T  47290332 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggtacaataatc 47290272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 410
Target Start/End: Original strand, 44744452 - 44744500
Alignment:
Q  362 aagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||| ||||||  ||||| |||||||||| |||||||||    
T  44744452 aagaaagattttattaagaaatatttaaaaatgacatggtagaataatc 44744500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 8e-28; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 345 - 408
Target Start/End: Original strand, 24394972 - 24395035
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24394972 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 24395035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 42611810 - 42611876
Alignment:
Q  344 cgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42611810 cgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42611876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 3961979 - 3962044
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3961979 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 3962044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 4974800 - 4974735
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4974800 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 4974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 15577915 - 15577850
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15577915 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 15577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 34482835 - 34482900
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34482835 gagcaatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatc 34482900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 45637712 - 45637777
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45637712 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 45637777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 15329273 - 15329338
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  15329273 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 15329338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 25167915 - 25167850
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  25167915 gagcaatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 25167850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 37477145 - 37477080
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  37477145 gagcaatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatc 37477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 48880992 - 48880927
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  48880992 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 48880927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 18036978 - 18037043
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  18036978 gagcaatgatatatatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatc 18037043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 35444558 - 35444623
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  35444558 gagcaatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 35444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 348 - 409
Target Start/End: Complemental strand, 36790528 - 36790467
Alignment:
Q  348 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 409  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  36790528 caatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataat 36790467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 29737143 - 29737204
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatc 29737204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 15238382 - 15238447
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||| | ||| ||||||||| || |||||||||||||||||||||||    
T  15238382 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 15238447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 398
Target Start/End: Complemental strand, 20010162 - 20010109
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacat 398  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  20010162 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacat 20010109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 42696083 - 42696148
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| |||||||||||||||||||||| || ||  ||||||||||||||| |||||||||||    
T  42696083 gagcaatgttatatatcaagaaagattttattaaaaattttttaagaatgacatagcagaataatc 42696148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 373 - 410
Target Start/End: Original strand, 30848597 - 30848634
Alignment:
Q  373 tatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30848597 tatcaagaaaattttaagaatgacatggcagaataatc 30848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 25167655 - 25167715
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  25167655 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 25167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 48880726 - 48880786
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  48880726 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 48880786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 29737403 - 29737350
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||| |||||||||||||||  ||||||||| ||||| || |||||||    
T  29737403 atatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatc 29737350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 30848835 - 30848775
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| | |||||| ||||||| || ||||||||||||||| |||||||    
T  30848835 aatgctagatatcaagaatgcttttat-aagaaaaattcaagaatgacatggcacaataatc 30848775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 37476879 - 37476939
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| ||||| |||||||||  ||||| |||||||||||| |||||||    
T  37476879 aatgctagatatcaagaatgattt-atcaagaaagatttaataatgacatggcacaataatc 37476939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 42612077 - 42612017
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  | |||||||||||||||| |||||||    
T  42612077 aatgctagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaataatc 42612017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 4396 - 4461
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4396 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 4662 - 4602
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  4662 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatc 4602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 18404442 - 18404507
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18404442 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatc 18404507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 25463676 - 25463741
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25463676 gagcaatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatc 25463741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 40214988 - 40215053
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40214988 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 40215053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 348 - 410
Target Start/End: Original strand, 3559620 - 3559682
Alignment:
Q  348 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3559620 caatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 3559682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 44094697 - 44094763
Alignment:
Q  344 cgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  44094697 cgagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 44094763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 9910358 - 9910293
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  9910358 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 9910293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 16045859 - 16045798
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16045859 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16045798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 41876507 - 41876442
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  41876507 gagcaatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatc 41876442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 19015404 - 19015469
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  19015404 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 19015469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 36966773 - 36966708
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  36966773 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 36966708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 37821899 - 37821834
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  37821899 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 37821834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 6883487 - 6883552
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||| |||||||||||| | |||||||||| |||||||||||||||||||||||    
T  6883487 gagcaatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatc 6883552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 408
Target Start/End: Complemental strand, 32000332 - 32000269
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 408  Q
    ||||||||||||||||||||||||||||| ||||||||| || |||||||||||| ||||||||    
T  32000332 gagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataa 32000269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 25973414 - 25973478
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||| |||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  25973414 gagcaatgttatatatcaagaaagattttatcatgaaaatttcaagaatgaca-ggcagaataatc 25973478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 40273702 - 40273767
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||| ||||||||||||||||| ||||||||| || |||||||||||| || |||||||    
T  40273702 gagcaatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatc 40273767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 27523322 - 27523255
Alignment:
Q  345 gagcaatgctatata--tcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||  |||||||  ||||||||||||||| ||||||||||||||| ||||||||||    
T  27523322 gagcaatgctatatacatcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatc 27523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 18404714 - 18404654
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  18404714 aatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatc 18404654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 19015670 - 19015610
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  19015670 aatgctacatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 19015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 34519758 - 34519795
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaa 382  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  34519758 gagcaatgctatatatcaagaaagattttattaagaaa 34519795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 44690828 - 44690881
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| || |||||||||||||||  || |||||||||||||||||||||||    
T  44690828 atatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatc 44690881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 51620980 - 51621017
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaa 382  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  51620980 gagcaatgctatatatcaagaaagattttattaagaaa 51621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 51737771 - 51737711
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  51737771 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 51737711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 409
Target Start/End: Complemental strand, 44691094 - 44691030
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 409  Q
    |||||||| | |||||||||||||||||||| || |||  || |||||| |||||||||||||||    
T  44691094 gagcaatgttgtatatcaagaaagattttataaaaaaagattcaagaattacatggcagaataat 44691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 6883753 - 6883696
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaata 407  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| ||||    
T  6883753 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcataata 6883696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 407
Target Start/End: Original strand, 52064376 - 52064434
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaata 407  Q
    ||||||| ||||||| || |||||||||||||||  || |||||||||||| |||||||    
T  52064376 aatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaata 52064434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 9910098 - 9910150
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  9910098 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9910150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 20304929 - 20304989
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  20304929 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 20304989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 25973673 - 25973613
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||    
T  25973673 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 25973613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 32000065 - 32000125
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| ||||| |||||||||  || ||||||||||||||| |||||||    
T  32000065 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 32000125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 33786430 - 33786490
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| ||||| |||||||||  || ||||||||||||||| |||||||    
T  33786430 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 33786490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 33786695 - 33786635
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| ||||| |||||||||  || ||||||||||||||| |||||||    
T  33786695 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 33786635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 37821633 - 37821693
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||    
T  37821633 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 37821693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 40215254 - 40215194
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||    
T  40215254 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 40215194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 40273974 - 40273914
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| ||||| |||||||||  || ||||||||||||||| |||||||    
T  40273974 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatc 40273914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 410
Target Start/End: Original strand, 41876241 - 41876301
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||| ||| |||||||    
T  41876241 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatagcacaataatc 41876301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 52329319 - 52329356
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaa 382  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  52329319 gagcaatgttatatatcaagaaagaatttatcaagaaa 52329356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 375
Target Start/End: Original strand, 28391408 - 28391440
Alignment:
Q  343 tcgagcaatgctatatatcaagaaagattttat 375  Q
    ||||||| |||||||||||||||||||||||||    
T  28391408 tcgagcagtgctatatatcaagaaagattttat 28391440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 3069 - 3133
Alignment:
Q  346 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3069 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 3133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 47849 - 47915
Alignment:
Q  344 cgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47849 cgagcaatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 47915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 12842 - 12907
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  12842 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 409
Target Start/End: Complemental strand, 13108 - 13049
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 409  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || ||||||    
T  13108 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 13049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 11621 - 11686
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  11621 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 11686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 410
Target Start/End: Complemental strand, 11879 - 11827
Alignment:
Q  357 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  11879 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 11827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 41011 - 41076
Alignment:
Q  345 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  41011 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 41076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 51; Significance: 4e-20; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 8413 - 8467
Alignment:
Q  356 tatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8413 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 15995 - 16049
Alignment:
Q  356 tatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15995 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16049  T

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Target: scaffold0228; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 25947 - 26001
Alignment:
Q  356 tatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25947 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 26001  T

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Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 16250 - 16190
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  16250 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 16190  T

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Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 26202 - 26142
Alignment:
Q  349 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 410  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  26202 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26142  T

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