View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1377_low_25 (Length: 302)
Name: NF1377_low_25
Description: NF1377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1377_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 183; Significance: 5e-99; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 68 - 250
Target Start/End: Original strand, 8437842 - 8438024
Alignment:
| Q |
68 |
caactatcattctcatcaccattcatccttgcaaaaataacagtatcattcatttgtctcgacaacttaatcactgtcggataaaccttaacacatggcc |
167 |
Q |
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| T |
8437842 |
caactatcattctcatcaccattcatccttgcaaaaataacagtatcattcatttgtctcgacaacttaatcactgtcggataaaccttaacacatggcc |
8437941 |
T |
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| Q |
168 |
cacaatgtttaagaccaacatcaagaacaataagcttatgatcaatcttatgatcctcaataagtttctcaacatcttctctg |
250 |
Q |
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| T |
8437942 |
cacaatgtttaagaccaacatcaagaacaataagcttatgatcaatcttatgatcctcaataagtttctcaacatcttctctg |
8438024 |
T |
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