View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13780_high_3 (Length: 493)

Name: NF13780_high_3
Description: NF13780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13780_high_3
NF13780_high_3
[»] chr1 (51 HSPs)
chr1 (17-474)||(45935221-45935678)
chr1 (280-327)||(25715343-25715390)
chr1 (280-330)||(28090711-28090761)
chr1 (280-330)||(37462893-37462943)
chr1 (280-330)||(41560444-41560494)
chr1 (279-330)||(10200322-10200373)
chr1 (252-330)||(30202118-30202197)
chr1 (279-330)||(39140730-39140781)
chr1 (280-330)||(4590549-4590599)
chr1 (280-330)||(5338928-5338978)
chr1 (280-330)||(8796424-8796474)
chr1 (280-330)||(21769728-21769778)
chr1 (280-330)||(26113456-26113506)
chr1 (280-330)||(32404543-32404593)
chr1 (280-330)||(34444571-34444621)
chr1 (280-330)||(44751699-44751749)
chr1 (280-330)||(44941793-44941843)
chr1 (280-330)||(52561606-52561656)
chr1 (280-325)||(26299288-26299333)
chr1 (281-330)||(28511819-28511868)
chr1 (280-328)||(7124358-7124406)
chr1 (255-326)||(31274392-31274464)
chr1 (283-330)||(2429649-2429696)
chr1 (283-326)||(9599414-9599457)
chr1 (280-319)||(15784982-15785021)
chr1 (283-330)||(17269009-17269056)
chr1 (283-330)||(27704165-27704212)
chr1 (283-330)||(36339824-36339871)
chr1 (283-330)||(37294128-37294175)
chr1 (280-319)||(43481815-43481854)
chr1 (283-330)||(52532636-52532683)
chr1 (280-330)||(1210960-1211010)
chr1 (280-330)||(2914140-2914190)
chr1 (280-330)||(19908052-19908102)
chr1 (280-330)||(22175360-22175410)
chr1 (280-330)||(25979248-25979298)
chr1 (280-330)||(27847817-27847867)
chr1 (280-330)||(29577467-29577517)
chr1 (280-330)||(38807688-38807738)
chr1 (280-330)||(38877360-38877410)
chr1 (280-330)||(43240396-43240446)
chr1 (280-330)||(49347410-49347460)
chr1 (280-330)||(50257785-50257835)
chr1 (285-330)||(2544808-2544853)
chr1 (256-316)||(4029351-4029412)
chr1 (281-330)||(11941598-11941647)
chr1 (280-325)||(40568427-40568472)
chr1 (280-316)||(28533696-28533732)
chr1 (283-327)||(41165500-41165544)
chr1 (280-316)||(46423233-46423269)
chr1 (280-316)||(52921309-52921345)
[»] chr3 (38 HSPs)
chr3 (339-470)||(15817454-15817585)
chr3 (17-154)||(15817624-15817759)
chr3 (280-330)||(24778626-24778676)
chr3 (254-330)||(45374467-45374544)
chr3 (280-328)||(40672384-40672432)
chr3 (280-330)||(15296122-15296172)
chr3 (280-330)||(24541349-24541399)
chr3 (280-330)||(40116355-40116405)
chr3 (280-330)||(40991646-40991696)
chr3 (280-330)||(41529976-41530026)
chr3 (284-330)||(46148243-46148289)
chr3 (280-330)||(48508450-48508500)
chr3 (280-330)||(48734164-48734214)
chr3 (280-330)||(52927865-52927915)
chr3 (254-330)||(12096695-12096772)
chr3 (281-330)||(29601107-29601156)
chr3 (280-328)||(19676098-19676146)
chr3 (280-324)||(38060935-38060979)
chr3 (283-330)||(42510036-42510083)
chr3 (280-327)||(49503585-49503632)
chr3 (280-330)||(5169047-5169097)
chr3 (280-330)||(19737199-19737248)
chr3 (280-330)||(19758102-19758151)
chr3 (280-330)||(31566178-31566228)
chr3 (280-330)||(37083309-37083359)
chr3 (280-330)||(45486866-45486916)
chr3 (280-330)||(54128594-54128644)
chr3 (254-330)||(7895870-7895947)
chr3 (285-330)||(23534592-23534637)
chr3 (280-325)||(31146919-31146964)
chr3 (281-330)||(39208823-39208872)
chr3 (254-330)||(53262356-53262433)
chr3 (280-316)||(7278693-7278729)
chr3 (280-316)||(35465758-35465794)
chr3 (255-330)||(47555323-47555399)
chr3 (280-328)||(50960654-50960702)
chr3 (280-316)||(52139029-52139065)
chr3 (283-327)||(52882682-52882726)
[»] chr7 (43 HSPs)
chr7 (280-332)||(9210721-9210773)
chr7 (280-330)||(28708596-28708646)
chr7 (283-330)||(24376043-24376090)
chr7 (280-330)||(1011261-1011311)
chr7 (280-330)||(2885739-2885789)
chr7 (257-330)||(6375083-6375157)
chr7 (280-330)||(28627950-28628000)
chr7 (280-330)||(40979945-40979995)
chr7 (280-326)||(42187660-42187706)
chr7 (280-330)||(45601691-45601741)
chr7 (280-330)||(47852302-47852352)
chr7 (255-330)||(28208319-28208395)
chr7 (253-316)||(29650613-29650677)
chr7 (280-327)||(6263477-6263524)
chr7 (280-319)||(7273326-7273365)
chr7 (256-330)||(12841267-12841342)
chr7 (287-330)||(25891103-25891146)
chr7 (280-319)||(27649006-27649045)
chr7 (280-330)||(4604762-4604812)
chr7 (280-330)||(11594175-11594225)
chr7 (280-330)||(14057693-14057743)
chr7 (280-330)||(14367721-14367771)
chr7 (280-330)||(21078132-21078182)
chr7 (280-330)||(31682619-31682669)
chr7 (280-330)||(35906218-35906268)
chr7 (280-330)||(36101794-36101844)
chr7 (280-330)||(36652207-36652257)
chr7 (280-330)||(37618160-37618210)
chr7 (280-330)||(39906389-39906439)
chr7 (280-318)||(42969925-42969963)
chr7 (280-330)||(44855191-44855241)
chr7 (280-330)||(45836499-45836549)
chr7 (280-330)||(47652762-47652812)
chr7 (256-316)||(31005434-31005495)
chr7 (286-330)||(2882759-2882803)
chr7 (280-320)||(20158688-20158728)
chr7 (283-319)||(30814145-30814181)
chr7 (283-319)||(31681040-31681076)
chr7 (280-316)||(31869119-31869155)
chr7 (280-330)||(33281102-33281151)
chr7 (280-316)||(33349823-33349859)
chr7 (282-330)||(34035173-34035221)
chr7 (255-330)||(38900172-38900247)
[»] chr4 (44 HSPs)
chr4 (255-330)||(15661863-15661939)
chr4 (280-330)||(26024867-26024917)
chr4 (280-330)||(35690486-35690536)
chr4 (254-330)||(4441068-4441145)
chr4 (283-330)||(28467653-28467700)
chr4 (254-324)||(30634096-30634167)
chr4 (280-319)||(47265212-47265251)
chr4 (280-330)||(48174110-48174160)
chr4 (285-330)||(51176789-51176834)
chr4 (280-328)||(55007963-55008011)
chr4 (280-316)||(56375519-56375555)
chr4 (280-315)||(1380600-1380635)
chr4 (280-319)||(4879126-4879165)
chr4 (280-319)||(7947163-7947202)
chr4 (280-319)||(15665327-15665366)
chr4 (280-327)||(28236400-28236447)
chr4 (283-330)||(29399019-29399066)
chr4 (283-330)||(36255542-36255589)
chr4 (280-327)||(45209222-45209269)
chr4 (280-319)||(50862857-50862896)
chr4 (280-319)||(50967045-50967084)
chr4 (280-330)||(21359242-21359292)
chr4 (255-316)||(21528517-21528579)
chr4 (280-330)||(23906314-23906364)
chr4 (280-330)||(25575039-25575089)
chr4 (280-330)||(26037522-26037572)
chr4 (280-330)||(27450197-27450247)
chr4 (280-330)||(31959831-31959881)
chr4 (280-330)||(39100553-39100603)
chr4 (280-330)||(49939751-49939801)
chr4 (280-330)||(51421945-51421995)
chr4 (280-330)||(51438660-51438710)
chr4 (280-330)||(52569532-52569582)
chr4 (280-317)||(7544548-7544585)
chr4 (281-330)||(13805283-13805332)
chr4 (280-325)||(19969401-19969446)
chr4 (281-330)||(28486136-28486185)
chr4 (256-328)||(37488308-37488381)
chr4 (280-325)||(50238632-50238677)
chr4 (280-325)||(50238718-50238763)
chr4 (280-316)||(436458-436494)
chr4 (280-316)||(12494892-12494928)
chr4 (255-330)||(19061926-19062002)
chr4 (255-330)||(31459209-31459285)
[»] chr8 (25 HSPs)
chr8 (280-330)||(490550-490600)
chr8 (280-330)||(1928604-1928654)
chr8 (280-330)||(45419450-45419500)
chr8 (280-328)||(45041333-45041381)
chr8 (279-330)||(30689950-30690001)
chr8 (280-330)||(35914618-35914668)
chr8 (279-330)||(1313779-1313830)
chr8 (279-330)||(29520864-29520915)
chr8 (283-330)||(32931175-32931222)
chr8 (280-330)||(11523740-11523790)
chr8 (280-330)||(12491155-12491205)
chr8 (280-330)||(14742099-14742149)
chr8 (280-330)||(16035744-16035794)
chr8 (280-330)||(18741847-18741897)
chr8 (280-330)||(18746811-18746861)
chr8 (284-330)||(27556323-27556369)
chr8 (280-330)||(32276900-32276950)
chr8 (280-330)||(36565258-36565308)
chr8 (255-316)||(44047523-44047585)
chr8 (284-329)||(14903777-14903822)
chr8 (280-316)||(10668514-10668550)
chr8 (280-316)||(25473420-25473456)
chr8 (286-330)||(35646953-35646997)
chr8 (280-316)||(36545378-36545414)
chr8 (280-316)||(44529454-44529490)
[»] chr6 (19 HSPs)
chr6 (280-330)||(34522-34572)
chr6 (280-330)||(30031471-30031521)
chr6 (280-330)||(12890790-12890840)
chr6 (280-319)||(5897683-5897722)
chr6 (283-330)||(8364771-8364818)
chr6 (279-330)||(31819046-31819097)
chr6 (254-327)||(579636-579710)
chr6 (280-330)||(655411-655461)
chr6 (280-330)||(3206476-3206526)
chr6 (280-330)||(5096049-5096099)
chr6 (280-330)||(18130831-18130881)
chr6 (280-330)||(23888495-23888545)
chr6 (280-330)||(28085591-28085641)
chr6 (288-330)||(30642984-30643026)
chr6 (280-330)||(32068635-32068685)
chr6 (258-330)||(5258142-5258215)
chr6 (280-316)||(1615240-1615276)
chr6 (280-316)||(9706999-9707035)
chr6 (280-316)||(34934847-34934883)
[»] chr5 (32 HSPs)
chr5 (280-330)||(27386555-27386605)
chr5 (273-330)||(32442135-32442192)
chr5 (280-332)||(41894286-41894338)
chr5 (280-330)||(14667986-14668036)
chr5 (280-330)||(20456988-20457038)
chr5 (280-330)||(29922499-29922549)
chr5 (280-330)||(38132551-38132601)
chr5 (280-330)||(42272692-42272742)
chr5 (281-330)||(418052-418101)
chr5 (283-330)||(7359281-7359328)
chr5 (280-327)||(38105280-38105327)
chr5 (286-329)||(41108752-41108795)
chr5 (280-330)||(1275479-1275529)
chr5 (280-330)||(2915513-2915563)
chr5 (280-318)||(5558368-5558406)
chr5 (280-330)||(7678692-7678742)
chr5 (280-330)||(9235262-9235311)
chr5 (280-330)||(13561403-13561453)
chr5 (254-319)||(14665938-14666004)
chr5 (280-318)||(18855834-18855872)
chr5 (280-330)||(29816597-29816647)
chr5 (280-330)||(30213790-30213840)
chr5 (280-330)||(30639733-30639783)
chr5 (280-330)||(38685182-38685232)
chr5 (280-326)||(39322096-39322142)
chr5 (280-330)||(42576225-42576275)
chr5 (280-325)||(408511-408556)
chr5 (281-330)||(11069180-11069229)
chr5 (280-316)||(3302073-3302109)
chr5 (280-316)||(4496613-4496649)
chr5 (280-328)||(5860051-5860099)
chr5 (255-330)||(10639517-10639593)
[»] chr2 (33 HSPs)
chr2 (280-330)||(9531617-9531667)
chr2 (279-330)||(887081-887132)
chr2 (283-330)||(3720435-3720482)
chr2 (280-327)||(10516766-10516813)
chr2 (280-330)||(11412925-11412975)
chr2 (280-330)||(12520079-12520129)
chr2 (280-330)||(12882062-12882112)
chr2 (280-330)||(18959126-18959176)
chr2 (280-330)||(25384684-25384734)
chr2 (280-330)||(33504439-33504489)
chr2 (280-326)||(43573147-43573193)
chr2 (281-330)||(39709219-39709268)
chr2 (280-332)||(440929-440981)
chr2 (255-330)||(3635314-3635390)
chr2 (255-330)||(12734915-12734991)
chr2 (287-330)||(3481369-3481412)
chr2 (283-330)||(9496081-9496128)
chr2 (279-330)||(45543089-45543140)
chr2 (280-330)||(227404-227454)
chr2 (280-330)||(4807810-4807860)
chr2 (280-330)||(11992125-11992175)
chr2 (280-330)||(12474944-12474994)
chr2 (280-330)||(17670683-17670733)
chr2 (280-330)||(28508893-28508943)
chr2 (280-330)||(30306247-30306297)
chr2 (280-330)||(38435167-38435217)
chr2 (280-317)||(16521024-16521061)
chr2 (289-330)||(32364947-32364988)
chr2 (280-332)||(3030892-3030943)
chr2 (280-316)||(8181009-8181045)
chr2 (280-316)||(25834907-25834943)
chr2 (280-316)||(38328387-38328423)
chr2 (280-316)||(41763060-41763096)
[»] scaffold1318 (1 HSPs)
scaffold1318 (280-330)||(546-596)
[»] scaffold0491 (1 HSPs)
scaffold0491 (280-330)||(3652-3702)
[»] scaffold0392 (1 HSPs)
scaffold0392 (280-330)||(6789-6839)
[»] scaffold0168 (1 HSPs)
scaffold0168 (280-330)||(28906-28956)
[»] scaffold0050 (1 HSPs)
scaffold0050 (280-330)||(58243-58293)
[»] scaffold0199 (1 HSPs)
scaffold0199 (258-330)||(14798-14871)
[»] scaffold0157 (1 HSPs)
scaffold0157 (280-316)||(25549-25585)
[»] scaffold0018 (1 HSPs)
scaffold0018 (280-316)||(31697-31733)


Alignment Details
Target: chr1 (Bit Score: 413; Significance: 0; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 17 - 474
Target Start/End: Complemental strand, 45935678 - 45935221
Alignment:
Q  17 cacttcaagagtcccctgcatgtttgtgcaatcttgattgcaaaagagaaagnnnnnnntgttataatttcagggattaaaatcatatttaaaccacaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||||||||||||||    
T  45935678 cacttcaagagtcccctgcatgtttgtgcaatcttgattgcaaaagagaaagaaaaaaatgttataatttcaggaattaaaatcatatttaaaccacaac 45935579  T
Q  117 ttcttttgcagagaccaaaacaaaatgaagcatatttaaagacttaaaaatatatctaagcctctataaaatcttcttcaatcttcctaatacatatcat 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45935578 ttcttttgcagagaccaaaacaaaatgaagcatatttaaagacttaaaaatatatctaagcctctataaaatcttcttcaatcttcctaatacatatcat 45935479  T
Q  217 acaatagcaaaatgagcaaaaattgttgttggctatgtacaacaacaacgacgacgaccaagattatcccactaagtgaggtccgctacatggatcaaat 316  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||    
T  45935478 acaatagcaaaatgagaaaaaattgttgttggctatgtacaacaacaacaacaacgaccaagattatcccactaagtgaggtccgttacatggatcaaat 45935379  T
Q  317 tactccataatgttgttagctatatgatgcaggaattttagcttaccagaataatggcccatccagagggcatgaaggcaagaacggaagcaaacaaatc 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45935378 tactccataatgttgttagctatatgatgcaggaattttagcttaccagaataatggcccatccagagggcatgaaggcaagaacggaagcaaacaaatc 45935279  T
Q  417 tgataccgtaagcgcacacacaacaaataacactatcattactgacaagaagccaaga 474  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45935278 tgataccgtaagcgcgcacacaacaaataacactatcattactgacaagaagccaaga 45935221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 25715343 - 25715390
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 327  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  25715343 ttatcccactaagtgaggtcggctacatggatcaaattacgccataat 25715390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 28090711 - 28090761
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  28090711 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 28090761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 37462893 - 37462943
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  37462893 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 37462943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 41560494 - 41560444
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  41560494 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 41560444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 10200322 - 10200373
Alignment:
Q  279 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||| |||||    
T  10200322 attatcccattaagtgaggtcggctacatggatcaaattacaccatgatgtt 10200373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 30202118 - 30202197
Alignment:
Q  252 tgtacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||| || || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  30202118 tgtacaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 30202197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 39140781 - 39140730
Alignment:
Q  279 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||| |||| |||||||| |||||||||| ||||||||||    
T  39140781 attatcccactaagtggggtcggctacatgaatcaaattacgccataatgtt 39140730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 4590549 - 4590599
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  4590549 ttatcccactaagtggggtcggctacatggatcaaattacaccatattgtt 4590599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 5338978 - 5338928
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||| |||||||||||||  ||||||||||||||||||| ||||||||||    
T  5338978 ttatctcactaagtgaggttggctacatggatcaaattacgccataatgtt 5338928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 8796474 - 8796424
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||| ||||||| ||||||||||    
T  8796474 ttatcccactaagtggggtcggctacatggattaaattacgccataatgtt 8796424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 21769728 - 21769778
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||| ||||||||| |||| ||||||||||||||||||| ||||||||||    
T  21769728 ttatcacactaagtggggtcggctacatggatcaaattacgccataatgtt 21769778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 26113456 - 26113506
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||||| || ||||||||||||||||||  ||||||||||    
T  26113456 ttatcccactaagtgagctcggctacatggatcaaattaagccataatgtt 26113506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 32404543 - 32404593
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| |||| |||||    
T  32404543 ttatcccactaagtggggtcggctacatggatcaaattacgccattatgtt 32404593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 34444621 - 34444571
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||| ||||||||||| ||||||||||    
T  34444621 ttatcccactaagtggggtcggctacatagatcaaattacaccataatgtt 34444571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 44751749 - 44751699
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||||||| |||||||||||||||| || ||||| ||||    
T  44751749 ttatcccactaagtgaggtcggctacatggatcaaatgacgccatagtgtt 44751699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 44941793 - 44941843
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  44941793 ttatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 44941843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 52561606 - 52561656
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||| | ||||||||||    
T  52561606 ttatcccactaagtggggtcggctacatggatcaaatttcgccataatgtt 52561656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 26299333 - 26299288
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccata 325  Q
    ||||||||||||||| |||| ||||||||||||||||||| |||||    
T  26299333 ttatcccactaagtggggtcggctacatggatcaaattacgccata 26299288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 28511819 - 28511868
Alignment:
Q  281 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||| |||| ||||||| ||||||||||| ||||||||||    
T  28511819 tatcccactaagtggggtcggctacattgatcaaattacgccataatgtt 28511868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 7124406 - 7124358
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 328  Q
    |||||||||||||||||||| |||||||||||||||  || ||||||||    
T  7124406 ttatcccactaagtgaggtcagctacatggatcaaacgacaccataatg 7124358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 31274392 - 31274464
Alignment:
Q  255 acaacaacaacgacgacgaccaag-attatcccactaagtgaggtccgctacatggatcaaattactccataa 326  Q
    ||||||||||| || || |||||| |||||||||||||||| |||| ||||||  ||||||||||| ||||||    
T  31274392 acaacaacaacaacaacaaccaagcattatcccactaagtggggtcagctacacagatcaaattacgccataa 31274464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 2429649 - 2429696
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| |||| ||||| ||||||||||||| ||||||||||    
T  2429649 tcccactaagtggggtcggctacgtggatcaaattacgccataatgtt 2429696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 326
Target Start/End: Original strand, 9599414 - 9599457
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataa 326  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||||    
T  9599414 tcccactaagtaaggtcagctacatggatcaaattacgccataa 9599457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 319
Target Start/End: Original strand, 15784982 - 15785021
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattac 319  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  15784982 ttatcccactaaatgaggtcggctacatggatcaaattac 15785021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 17269009 - 17269056
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||| || |||| ||||||||||||||||||| ||||||||||    
T  17269009 tcccactaaatggggtcggctacatggatcaaattacgccataatgtt 17269056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 27704212 - 27704165
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||| | |||| ||||||||||||||||||| ||||||||||    
T  27704212 tcccactaagcggggtcggctacatggatcaaattacgccataatgtt 27704165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 36339824 - 36339871
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||  ||| |||||||||||||||||||| |||||||||    
T  36339824 tcccactaagtggagtcagctacatggatcaaattacttcataatgtt 36339871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 37294128 - 37294175
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||| || |||| ||||||||||||||||||| ||||||||||    
T  37294128 tcccactaaatggggtcagctacatggatcaaattacgccataatgtt 37294175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 319
Target Start/End: Original strand, 43481815 - 43481854
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattac 319  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  43481815 ttatcccactaagtggggtcggctacatggatcaaattac 43481854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 52532636 - 52532683
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| |||| |||||||| |||||||||| ||||||||||    
T  52532636 tcccactaagtggggtcggctacatgaatcaaattacgccataatgtt 52532683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 1211010 - 1210960
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  1211010 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 1210960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 2914140 - 2914190
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||  ||||||||||||||| ||| ||||||||||    
T  2914140 ttatcccactaagtggggttggctacatggatcaaagtacgccataatgtt 2914190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 19908052 - 19908102
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||| ||||||| | ||||||||    
T  19908052 ttatcccactaagtggggtcggctacatggataaaattacgcaataatgtt 19908102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 22175410 - 22175360
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||||   ||||||||||    
T  22175410 ttatcccactaagtggggtcggctacatggatcaaattctaccataatgtt 22175360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 25979248 - 25979298
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  25979248 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 25979298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 27847817 - 27847867
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||||| || ||||||||||| |||||||  |||||||||    
T  27847817 ttatcccactaagtgagatcggctacatggataaaattacggcataatgtt 27847867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 29577517 - 29577467
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  29577517 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 29577467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 38807688 - 38807738
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||| |||||||| ||||| ||||    
T  38807688 ttatcccactaagtggggtcggctacatggaacaaattacgccatagtgtt 38807738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 38877360 - 38877410
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| | || |||||||||||||||| || ||||||||||    
T  38877360 ttatcccactaagtgggttcggctacatggatcaaatgacgccataatgtt 38877410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 43240396 - 43240446
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||||||| |||||||| ||||||| || ||||| ||||    
T  43240396 ttatcccactaagtgaggtcggctacatgaatcaaatgacgccatagtgtt 43240446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 49347410 - 49347460
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  49347410 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 49347460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 50257835 - 50257785
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||| ||||||||| |||  ||||||||||||||||||| ||||||||||    
T  50257835 ttatctcactaagtggggttggctacatggatcaaattacaccataatgtt 50257785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 2544853 - 2544808
Alignment:
Q  285 ccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||| |||| ||||||||||||||||||  ||||||||||    
T  2544853 ccactaagtggggtcggctacatggatcaaattatgccataatgtt 2544808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 4029412 - 4029351
Alignment:
Q  256 caacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    |||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||||||||    
T  4029412 caacaacaacaacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaat 4029351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 11941598 - 11941647
Alignment:
Q  281 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||||| |  |||||||||||||| ||| ||||||||||    
T  11941598 tatcccactaagtgaggccgactacatggatcaaaatacgccataatgtt 11941647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 40568427 - 40568472
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccata 325  Q
    ||||||||||||||| |||  ||||||||||||||||||| |||||    
T  40568427 ttatcccactaagtggggttggctacatggatcaaattacgccata 40568472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 28533732 - 28533696
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  28533732 ttatcccactaagtggggtcggctacatggatcaaat 28533696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 41165544 - 41165500
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataat 327  Q
    |||||||||||| |||| |||||||||||||||| || |||||||    
T  41165544 tcccactaagtggggtcggctacatggatcaaatgacgccataat 41165500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 46423233 - 46423269
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  46423233 ttatcccactaagtggggtcggctacatggatcaaat 46423269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 52921345 - 52921309
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  52921345 ttatcccactaagtggggtcggctacatggatcaaat 52921309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 3e-61; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 339 - 470
Target Start/End: Complemental strand, 15817585 - 15817454
Alignment:
Q  339 tatgatgcaggaattttagcttaccagaataatggcccatccagagggcatgaaggcaagaacggaagcaaacaaatctgataccgtaagcgcacacaca 438  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15817585 tatgatgcaggaaatttagcttaccagaataatggcccatccagagggcatgaaggcaagaacggaagcaaacaaatctgataccgtaagcgcacacaca 15817486  T
Q  439 acaaataacactatcattactgacaagaagcc 470  Q
    ||||||||||||  ||||||||||||||||||    
T  15817485 acaaataacactgccattactgacaagaagcc 15817454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 15817759 - 15817624
Alignment:
Q  17 cacttcaagagtcccctgcatgtttgtgcaatcttgattgcaaaagagaaagnnnnnnntgttataatttcagggattaaaatcatatttaaaccacaac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||  |       ||||||||||||||||||||||||||||||||||||  |||    
T  15817759 cacttcaagagtcccctacatgtttgtgcaatcttgattgcaaaagaga--gaaaaaaatgttataatttcagggattaaaatcatatttaaaccgaaac 15817662  T
Q  117 ttcttttgcagagaccaaaacaaaatgaagcatattta 154  Q
    || |||||||||||| ||||||||| ||||||||||||    
T  15817661 tttttttgcagagactaaaacaaaaagaagcatattta 15817624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 24778626 - 24778676
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  24778626 ttatcccactaagtggggtcggctacatggatcaaattacaccataatgtt 24778676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 45374467 - 45374544
Alignment:
Q  254 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||| ||||||| ||||||||||    
T  45374467 tacaacaacaacaacaacaaccaagccttatcccactaagtggggtcagctacatggattaaattacgccataatgtt 45374544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 40672384 - 40672432
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 328  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  40672384 ttatcccactaagtgaggtcagctacatggatcaaattatgccataatg 40672432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 15296172 - 15296122
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| || |||||||||||||||| ||||||||||    
T  15296172 ttatcccactaagtggggtcggccacatggatcaaattacaccataatgtt 15296122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 24541349 - 24541399
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| | ||||||||||||||||| ||||||||||    
T  24541349 ttatcccactaagtggggtcgggtacatggatcaaattacgccataatgtt 24541399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 40116355 - 40116405
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||| |||||| ||||| ||||||||||||| ||||||||||    
T  40116355 ttatcccactaagcgaggtcggctacgtggatcaaattacgccataatgtt 40116405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 40991696 - 40991646
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||| ||||||||| |||| ||||||||||||||||||| ||||||||||    
T  40991696 ttatctcactaagtggggtcagctacatggatcaaattacaccataatgtt 40991646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 41530026 - 41529976
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  41530026 ttatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 41529976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 330
Target Start/End: Complemental strand, 46148289 - 46148243
Alignment:
Q  284 cccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  46148289 cccactaagtggggtcggctacatggatcaaattacgccataatgtt 46148243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 48508500 - 48508450
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  48508500 ttatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 48508450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 48734164 - 48734214
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||| |||| ||||||||||    
T  48734164 ttatcccactaagtggggtcagctacatggatcaacttacgccataatgtt 48734214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 52927865 - 52927915
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  52927865 ttatcccactaagtggggtcggctacatggatcaaattatgccataatgtt 52927915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 12096695 - 12096772
Alignment:
Q  254 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| || || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  12096695 tacaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 12096772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 29601156 - 29601107
Alignment:
Q  281 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||| |||| |||||||||||||||||||  |||||||||    
T  29601156 tatcccactaagtggggtcagctacatggatcaaattacatcataatgtt 29601107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 19676098 - 19676146
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 328  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||||||    
T  19676098 ttatcccactaagtggggtcagctacatggatcaaatcacgccataatg 19676146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 38060979 - 38060935
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccat 324  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||    
T  38060979 ttatcccactaagtggggtcggctacatggatcaaattacgccat 38060935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 42510036 - 42510083
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||| ||||||| |||| ||||||||||||||||||| ||||||||||    
T  42510036 tccctctaagtggggtcggctacatggatcaaattacgccataatgtt 42510083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 49503585 - 49503632
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 327  Q
    ||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  49503585 ttatcccactaagtagggtcggctacatggatcaaattacgccataat 49503632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 5169097 - 5169047
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  5169097 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 5169047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 19737248 - 19737199
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  19737248 ttatcccactaagtggggtc-gctacatggatcaaattataccataatgtt 19737199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 19758151 - 19758102
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  19758151 ttatcccactaagtggggtc-gctacatggatcaaattataccataatgtt 19758102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 31566178 - 31566228
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  31566178 ttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgtt 31566228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 37083309 - 37083359
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||| ||| |||||||| ||||||||||    
T  37083309 ttatcccactaagtggggtcggctacaaggaccaaattacgccataatgtt 37083359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 45486866 - 45486916
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| || | ||||||||||||||||||  ||||||||||    
T  45486866 ttatcccactaagtggggccggctacatggatcaaattatgccataatgtt 45486916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 54128644 - 54128594
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| ||||  |||||||||||||||||  ||||||||||    
T  54128644 ttatcccactaagtggggtcgcctacatggatcaaattatgccataatgtt 54128594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 7895870 - 7895947
Alignment:
Q  254 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| || || ||||||  |||||||| |||||| |||| |||||||||||||||| || ||||| ||||    
T  7895870 tacaacaacaacaacaacaaccaagccttatcccattaagtggggtcggctacatggatcaaatgacgccatagtgtt 7895947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 23534592 - 23534637
Alignment:
Q  285 ccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||| ||||||||||  |||||||||||||||||| ||||||||||    
T  23534592 ccacaaagtgaggtcgactacatggatcaaattacgccataatgtt 23534637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 31146964 - 31146919
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccata 325  Q
    |||||||||||||||  ||| ||||||||||||||||||| |||||    
T  31146964 ttatcccactaagtggagtcggctacatggatcaaattacaccata 31146919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 39208872 - 39208823
Alignment:
Q  281 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||| || ||||| ||||||||||||||||||  |||||||||    
T  39208872 tatcccactaactggggtcctctacatggatcaaattacgtcataatgtt 39208823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 53262433 - 53262356
Alignment:
Q  254 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| || || ||||||  ||||||||||||||| |||| ||||||| |||||||| || ||||| ||||    
T  53262433 tacaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaatgacgccatagtgtt 53262356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 7278729 - 7278693
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  7278729 ttatcccactaagtggggtcggctacatggatcaaat 7278693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 35465794 - 35465758
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  35465794 ttatcccattaagtgaggtcagctacatggatcaaat 35465758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 47555323 - 47555399
Alignment:
Q  255 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||| || || ||||||  ||||||||||||||| |||  |||||||||||||||| || ||||| ||||    
T  47555323 acaacaacaacaacaacaaccaagccttatcccactaagtggggttggctacatggatcaaatgacgccatagtgtt 47555399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 50960654 - 50960702
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 328  Q
    ||||||||||||||| |||  |||| |||||||||||||| ||||||||    
T  50960654 ttatcccactaagtggggttggctaaatggatcaaattacaccataatg 50960702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 52139065 - 52139029
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  52139065 ttatcccactaagtggggtcggctacatggatcaaat 52139029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 52882682 - 52882726
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataat 327  Q
    |||||||||||| |||  ||||||||||||||||||| |||||||    
T  52882682 tcccactaagtggggttggctacatggatcaaattacgccataat 52882726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 9210721 - 9210773
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgttgt 332  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  9210721 ttatcccactaagtggggtcagctacatggatcaaattacgccataatgttgt 9210773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 28708646 - 28708596
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  28708646 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 28708596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 24376043 - 24376090
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  24376043 tcccactaagcgaggtcggctacatggatcaaattacgccataatgtt 24376090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 1011311 - 1011261
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||| ||||||||||| ||||||||||    
T  1011311 ttatcccactaagtggggtcggctacatagatcaaattacaccataatgtt 1011261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 2885739 - 2885789
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  2885739 ttatcccactaagtggggtcggctacatggatcaaattacaccatagtgtt 2885789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 6375157 - 6375083
Alignment:
Q  257 aacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  6375157 aacaacaacgacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 6375083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 28627950 - 28628000
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  28627950 ttatcccactaagtggagtcggctacatggatcaaattacgccataatgtt 28628000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 40979945 - 40979995
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  40979945 ttatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 40979995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 42187706 - 42187660
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataa 326  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  42187706 ttatcccactaagtggggtcggctacatggatcaaattacgccataa 42187660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 45601741 - 45601691
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||| ||||    
T  45601741 ttatcccactaagtgagttcagctacatggatcaaattacaccatagtgtt 45601691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 47852352 - 47852302
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||| ||||||| |||| ||||||||||||||||||| ||||||||||    
T  47852352 ttatccccctaagtggggtcggctacatggatcaaattacgccataatgtt 47852302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 28208319 - 28208395
Alignment:
Q  255 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||| || || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  28208319 acaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 28208395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 316
Target Start/End: Complemental strand, 29650677 - 29650613
Alignment:
Q  253 gtacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||||||||    
T  29650677 gtacaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 29650613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 6263524 - 6263477
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 327  Q
    ||||||||||||||| |||| ||||||||||||||||||  |||||||    
T  6263524 ttatcccactaagtggggtcggctacatggatcaaattatgccataat 6263477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 7273365 - 7273326
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattac 319  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  7273365 ttatcccactaagtggggtcggctacatggatcaaattac 7273326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 12841267 - 12841342
Alignment:
Q  256 caacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||| || || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  12841267 caacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 12841342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 25891146 - 25891103
Alignment:
Q  287 actaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||    
T  25891146 actaagtggggtcggctacatggatcaaattacaccataatgtt 25891103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 27649045 - 27649006
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattac 319  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  27649045 ttatcccactaagtggggtcggctacatggatcaaattac 27649006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 4604812 - 4604762
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||  ||||||||||||||| ||| ||||||||||    
T  4604812 ttatcccactaagtggggttggctacatggatcaaagtacgccataatgtt 4604762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 11594225 - 11594175
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  11594225 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 11594175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 14057743 - 14057693
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||| |||||||| |||  ||||||||||||||||||| ||||||||||    
T  14057743 ttatcctactaagtggggttggctacatggatcaaattaccccataatgtt 14057693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 14367771 - 14367721
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||| |||||||| |||  ||||||||||||||||||| ||||||||||    
T  14367771 ttatcctactaagtggggttggctacatggatcaaattaccccataatgtt 14367721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 21078182 - 21078132
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| ||| ||| |||||||||||||||| || ||||||||||    
T  21078182 ttatcccactaaatgaagtcggctacatggatcaaatgacgccataatgtt 21078132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 31682619 - 31682669
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  31682619 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 31682669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 35906218 - 35906268
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  35906218 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 35906268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 36101794 - 36101844
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| ||||  ||||||||||||||||||  |||||||||    
T  36101794 ttatcccactaagtggggtcaactacatggatcaaattacgtcataatgtt 36101844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 36652257 - 36652207
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  36652257 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 36652207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 37618210 - 37618160
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  37618210 ttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgtt 37618160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 39906389 - 39906439
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  39906389 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 39906439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 318
Target Start/End: Complemental strand, 42969963 - 42969925
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaatta 318  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  42969963 ttatcccactaagtggggtcggctacatggatcaaatta 42969925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 44855191 - 44855241
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||| |||||||| ||||| ||||    
T  44855191 ttatcccactaagtggggtcggctacatggaccaaattacgccatagtgtt 44855241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 45836499 - 45836549
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  45836499 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 45836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 47652812 - 47652762
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||| ||||||| |||| ||||||||||    
T  47652812 ttatcccactaagtggggtcggctacagggatcaagttacgccataatgtt 47652762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 316
Target Start/End: Complemental strand, 31005495 - 31005434
Alignment:
Q  256 caacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    |||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||||||||    
T  31005495 caacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 31005434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 2882759 - 2882803
Alignment:
Q  286 cactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||| |||| || ||||||||||| ||||||||||    
T  2882759 cactaagtgaggtcagctaaatagatcaaattacgccataatgtt 2882803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 320
Target Start/End: Original strand, 20158688 - 20158728
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattact 320  Q
    ||||||||||||||  |||| ||||||||||||||||||||    
T  20158688 ttatcccactaagtagggtcagctacatggatcaaattact 20158728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 319
Target Start/End: Original strand, 30814145 - 30814181
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattac 319  Q
    |||||||||||| |||| |||||||||||||||||||    
T  30814145 tcccactaagtggggtcggctacatggatcaaattac 30814181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 319
Target Start/End: Original strand, 31681040 - 31681076
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattac 319  Q
    |||||||||||| |||| |||||||||||||||||||    
T  31681040 tcccactaagtggggtcggctacatggatcaaattac 31681076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 31869119 - 31869155
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  31869119 ttatcccactaagtggggtcggctacatggatcaaat 31869155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 33281151 - 33281102
Alignment:
Q  280 ttatcccactaagtgaggtccg-ctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||  ||||| |||||||||||||||||| ||||||||||    
T  33281151 ttatcccactaagtg--gtccggctacatggatcaaattacaccataatgtt 33281102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 33349823 - 33349859
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  33349823 ttatcccattaagtgaggtcggctacatggatcaaat 33349859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 34035173 - 34035221
Alignment:
Q  282 atcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  34035173 atcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 34035221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 38900247 - 38900172
Alignment:
Q  255 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||| || || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  38900247 acaacaacaacaacaacaaccaagccttatcccactaagtg-ggtcggctacatggatcaaatgacgccatagtgtt 38900172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 15661863 - 15661939
Alignment:
Q  255 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||| || |||||   ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  15661863 acaacaacaacgacaacaaccaaaccttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 15661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 26024867 - 26024917
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  26024867 ttatcccactaagtgaggtcggctacatggataaaattacaccataatgtt 26024917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 35690536 - 35690486
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  35690536 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 35690486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 4441145 - 4441068
Alignment:
Q  254 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| |||||||| |||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  4441145 tacaacaacaacaacgacgacgaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 4441068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 28467700 - 28467653
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||    
T  28467700 tcccactaagcggggtccgctacatggatcaaattacgccataatgtt 28467653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 254 - 324
Target Start/End: Original strand, 30634096 - 30634167
Alignment:
Q  254 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccat 324  Q
    |||||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||||||||||| ||||    
T  30634096 tacaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccat 30634167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 319
Target Start/End: Original strand, 47265212 - 47265251
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattac 319  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  47265212 ttatcccactaagtgaggtcggctacatggatcaaattac 47265251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 48174110 - 48174160
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  48174110 ttatcccactaagtggggtctgctacatggatcaaatgacgccataatgtt 48174160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 51176834 - 51176789
Alignment:
Q  285 ccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||    
T  51176834 ccactaagtgtggtccgctacatggatcaaattatgccataatgtt 51176789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 55008011 - 55007963
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 328  Q
    ||||||||||||||| |||| |||||||||||||||||||  |||||||    
T  55008011 ttatcccactaagtggggtcggctacatggatcaaattacgtcataatg 55007963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 56375555 - 56375519
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    |||||||||||||||||||| ||||||||||||||||    
T  56375555 ttatcccactaagtgaggtcggctacatggatcaaat 56375519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 315
Target Start/End: Complemental strand, 1380635 - 1380600
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaa 315  Q
    |||||||||||||||||||| |||||||||||||||    
T  1380635 ttatcccactaagtgaggtcggctacatggatcaaa 1380600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 319
Target Start/End: Original strand, 4879126 - 4879165
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattac 319  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  4879126 ttatcccagtaagtgaggtcggctacatggatcaaattac 4879165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 7947202 - 7947163
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattac 319  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  7947202 ttatcccactaagtggggtcggctacatggatcaaattac 7947163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 15665366 - 15665327
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattac 319  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  15665366 ttatcccactaagtggggtcagctacatggatcaaattac 15665327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 28236447 - 28236400
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 327  Q
    ||||||||||||||| |||| ||||||| ||||||||||| |||||||    
T  28236447 ttatcccactaagtggggtcggctacatagatcaaattacaccataat 28236400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 29399066 - 29399019
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| |||| |||||||| |||||||||| ||||||||||    
T  29399066 tcccactaagtggggtcagctacatgaatcaaattacgccataatgtt 29399019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 36255542 - 36255589
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| |||| || |||||||||||||||| ||||||||||    
T  36255542 tcccactaagtggggtcggccacatggatcaaattacaccataatgtt 36255589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 45209222 - 45209269
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 327  Q
    ||||||||||||||| |||| ||||||||||||||| ||| |||||||    
T  45209222 ttatcccactaagtggggtcggctacatggatcaaactacgccataat 45209269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 50862896 - 50862857
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattac 319  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  50862896 ttatcccactaagtggggtcggctacatggatcaaattac 50862857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 319
Target Start/End: Original strand, 50967045 - 50967084
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattac 319  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  50967045 ttattccactaagtgaggtcggctacatggatcaaattac 50967084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 21359242 - 21359292
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||| |||| |||||||||| ||||||||||    
T  21359242 ttatcccactaagtggggtcggctgcatgaatcaaattacgccataatgtt 21359292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 21528579 - 21528517
Alignment:
Q  255 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||||||||    
T  21528579 acaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 21528517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 23906314 - 23906364
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  23906314 ttatcccactaagtggggtcagctacatggatcaaatgacgccatagtgtt 23906364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 25575089 - 25575039
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| || |||| ||||||||||||||||||| ||| ||||||    
T  25575089 ttatcccactaaatggggtctgctacatggatcaaattacaccacaatgtt 25575039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 26037522 - 26037572
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||| |||||| ||||| ||||    
T  26037522 ttatcccactaagtggggtcggctacatggatccaattacgccatagtgtt 26037572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 27450197 - 27450247
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  27450197 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 27450247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 31959831 - 31959881
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  31959831 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 31959881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 39100553 - 39100603
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||| | ||||| ||||||||||    
T  39100553 ttatcccactaagtggggtcggctacatggattatattacgccataatgtt 39100603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 49939751 - 49939801
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  49939751 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 49939801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 51421995 - 51421945
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||||| |  |||||||||||||||||||  |||||||||    
T  51421995 ttatcccactaagtgagattggctacatggatcaaattacgtcataatgtt 51421945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 51438710 - 51438660
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||| ||||  |||| ||||||||||||||||||| ||||||||||    
T  51438710 ttatcccacaaagttgggtcagctacatggatcaaattacgccataatgtt 51438660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 52569532 - 52569582
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  52569532 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 52569582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 7544548 - 7544585
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaatt 317  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  7544548 ttatcccactaagtggggtcggctacatggatcaaatt 7544585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 13805283 - 13805332
Alignment:
Q  281 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||| |||  ||||||||||||||||||  ||||||||||    
T  13805283 tatcccactaagtggggttggctacatggatcaaattatcccataatgtt 13805332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 19969446 - 19969401
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccata 325  Q
    ||||||||||||||| |||| |||||||||||||||| || |||||    
T  19969446 ttatcccactaagtggggtcggctacatggatcaaatgacgccata 19969401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 28486185 - 28486136
Alignment:
Q  281 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||  |||||| ||||||||||||||||||| ||||| ||||    
T  28486185 tatcccactaaccgaggtcagctacatggatcaaattacgccatattgtt 28486136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 328
Target Start/End: Complemental strand, 37488381 - 37488308
Alignment:
Q  256 caacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 328  Q
    |||||||||| || || ||||||  ||||||||||||||| ||   ||||||||||||||||||| ||||||||    
T  37488381 caacaacaacaacaacaaccaagccttatcccactaagtggggctggctacatggatcaaattacgccataatg 37488308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 50238632 - 50238677
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccata 325  Q
    ||||||||||||||| |||| |||||||||||||||| || |||||    
T  50238632 ttatcccactaagtggggtcggctacatggatcaaatgacgccata 50238677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 50238718 - 50238763
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccata 325  Q
    ||||||||||||||| |||| |||||||||||||||| || |||||    
T  50238718 ttatcccactaagtggggtcggctacatggatcaaatgacgccata 50238763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 436494 - 436458
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  436494 ttatcccactaagtggggtcggctacatggatcaaat 436458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 12494928 - 12494892
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  12494928 ttatcccactaagtggggtccgctacatggattaaat 12494892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 19061926 - 19062002
Alignment:
Q  255 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||| || || ||||||  ||||||||||| ||| |||| |||||||||||||||| || ||||| ||||    
T  19061926 acaacaacaacaacaacaaccaagccttatcccactaggtggggtcggctacatggatcaaatgacgccatagtgtt 19062002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 31459285 - 31459209
Alignment:
Q  255 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||| ||||||||| || ||||||  ||||||||||||||| |||| | |||||||||||| || | ||||||||||    
T  31459285 acaagaacaacgacaacaaccaagccttatcccactaagtggggtcgggtacatggatcaagttccgccataatgtt 31459209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 490600 - 490550
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  490600 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 490550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 1928604 - 1928654
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  1928604 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 1928654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 45419500 - 45419450
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  45419500 ttatcccactaagtggggtcggctacatggatcaaattacaccataatgtt 45419450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 45041333 - 45041381
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 328  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||    
T  45041333 ttatcccactaagtggggtcagctacatggatcaaattacgccataatg 45041381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 30690001 - 30689950
Alignment:
Q  279 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||| |||| |||||||||||||||||||  |||||||||    
T  30690001 attatcccactaagtggggtcggctacatggatcaaattacgtcataatgtt 30689950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 35914618 - 35914668
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||| ||||||||| |||| ||||||||||||||||||| ||||||||||    
T  35914618 ttatctcactaagtggggtcagctacatggatcaaattacgccataatgtt 35914668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 1313830 - 1313779
Alignment:
Q  279 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||| ||||  |||||||||| ||||||| ||||||||||    
T  1313830 attatcccactaagtggggtcaactacatggataaaattacgccataatgtt 1313779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 29520915 - 29520864
Alignment:
Q  279 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||| || |||  ||||||||||||||||||| ||||||||||    
T  29520915 attatcccactaaatggggtgggctacatggatcaaattacgccataatgtt 29520864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 32931222 - 32931175
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  32931222 tcccactaagtggggtcggctacatggatcaaattatgccataatgtt 32931175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 11523740 - 11523790
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  11523740 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 11523790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 12491155 - 12491205
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  12491155 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 12491205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 14742099 - 14742149
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  14742099 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 14742149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 16035744 - 16035794
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||| ||||||||||  |||||||||    
T  16035744 ttatcccactaagtggggtcagctacatgaatcaaattacgtcataatgtt 16035794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 18741897 - 18741847
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||| |||||||||||||  |||||||||    
T  18741897 ttatcccactaagtggggtcggctacttggatcaaattacgtcataatgtt 18741847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 18746861 - 18746811
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||| |||||||||||||  |||||||||    
T  18746861 ttatcccactaagtggggtcggctacttggatcaaattacgtcataatgtt 18746811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 330
Target Start/End: Original strand, 27556323 - 27556369
Alignment:
Q  284 cccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  27556323 cccactaagtggggtcggctacatggatcaaattatgccataatgtt 27556369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 32276950 - 32276900
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| | ||  |||||||||||||||||| ||||||||||    
T  32276950 ttatcccactaagtgggttcgtctacatggatcaaattacgccataatgtt 32276900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 36565258 - 36565308
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  36565258 ttatcccactaagtggggtcggctacatggatcaaataacgccatagtgtt 36565308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 316
Target Start/End: Original strand, 44047523 - 44047585
Alignment:
Q  255 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||| || || ||||||  ||||||||||||||| |||| ||||||||||||||||    
T  44047523 acaacaacaacaacaacaaccaagccttatcccactaagtggggtcagctacatggatcaaat 44047585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 329
Target Start/End: Complemental strand, 14903822 - 14903777
Alignment:
Q  284 cccactaagtgaggtccgctacatggatcaaattactccataatgt 329  Q
    ||||||||||| |||  ||||||||||||||||||| |||||||||    
T  14903822 cccactaagtggggtaagctacatggatcaaattacgccataatgt 14903777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 10668514 - 10668550
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  10668514 ttatcccactaagtgaggtcggctacatcgatcaaat 10668550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 25473420 - 25473456
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  25473420 ttatcccactaagtggggtcggctacatggatcaaat 25473456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 35646953 - 35646997
Alignment:
Q  286 cactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||| |||| ||| ||||||||||||||| ||||||||||    
T  35646953 cactaagtggggtcggctgcatggatcaaattacgccataatgtt 35646997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 36545414 - 36545378
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  36545414 ttatcccactaagtggggtcggctacatggatcaaat 36545378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 44529490 - 44529454
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  44529490 ttatcccactaagtggggtcggctacatggatcaaat 44529454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 34522 - 34572
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  34522 ttatcccactaagtggggtcagctacatggatcaaattacgccataatgtt 34572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 30031521 - 30031471
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  30031521 ttatcccactaagtgaggtcggctacatggatcaaattacgccatagtgtt 30031471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 12890840 - 12890790
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  12890840 ttatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 12890790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 5897722 - 5897683
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattac 319  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  5897722 ttatcccactaagtgggatccgctacatggatcaaattac 5897683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 8364818 - 8364771
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||| | |||| ||||||||||||||||||| ||||||||||    
T  8364818 tcccactaagcggggtcggctacatggatcaaattacgccataatgtt 8364771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 31819097 - 31819046
Alignment:
Q  279 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  31819097 attatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 31819046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 579710 - 579636
Alignment:
Q  254 tacaacaacaacgacgacgaccaagatt-atcccactaagtgaggtccgctacatggatcaaattactccataat 327  Q
    |||||||||||| || || |||||| || ||||||||||||| | || ||||||| ||||||||||| |||||||    
T  579710 tacaacaacaacaacaacaaccaagctttatcccactaagtgggatcggctacatagatcaaattacgccataat 579636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 655411 - 655461
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||||||||  |||||||||||||||| | ||| ||||||    
T  655411 ttatcccactaagtgaggtcacctacatggatcaaattgcaccacaatgtt 655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 3206476 - 3206526
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  3206476 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 3206526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 5096099 - 5096049
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| | || ||||||| ||||||||||| ||||||||||    
T  5096099 ttatcccactaagtgggatcggctacatagatcaaattacgccataatgtt 5096049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 18130831 - 18130881
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||| || ||| |||| ||||||||||||||||||| ||||||||||    
T  18130831 ttatcccattaggtggggtcggctacatggatcaaattacaccataatgtt 18130881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 23888495 - 23888545
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||| || ||| |||| ||||||||||||||||||| ||||||||||    
T  23888495 ttatcccattaggtggggtctgctacatggatcaaattacaccataatgtt 23888545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 28085641 - 28085591
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  28085641 ttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgtt 28085591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 30643026 - 30642984
Alignment:
Q  288 ctaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||    
T  30643026 ctaagtggggtcggctacatagatcaaattactccataatgtt 30642984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 32068685 - 32068635
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| | || |||||||| |||||||||| ||||||||||    
T  32068685 ttatcccactaagtgggatcggctacatgtatcaaattacgccataatgtt 32068635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 5258142 - 5258215
Alignment:
Q  258 acaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||| || || ||||||| ||||||||||||||| |||| ||||| |||||||||| || ||||| ||||    
T  5258142 acaacaacaacaacaaccaagacttatcccactaagtggggtcggctacgtggatcaaatgacgccatagtgtt 5258215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 1615240 - 1615276
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  1615240 ttatcccactaaatgaggtcggctacatggatcaaat 1615276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 9707035 - 9706999
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  9707035 ttatcccactaagtggggtcggctacatggatcaaat 9706999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 34934847 - 34934883
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  34934847 ttatcccactaagtggggtcggctacatggatcaaat 34934883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 27386605 - 27386555
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  27386605 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 27386555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 330
Target Start/End: Original strand, 32442135 - 32442192
Alignment:
Q  273 accaagattatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||| |||||||||||||||  ||| ||||||||||||||||||| ||||||||||    
T  32442135 accaagcttatcccactaagtggagtcggctacatggatcaaattacgccataatgtt 32442192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 41894338 - 41894286
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgttgt 332  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||||||||||||    
T  41894338 ttatcccactaagtggggttggctacatggatcaaattacaccataatgttgt 41894286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 14668036 - 14667986
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| | ||||||||||||||||| ||||||||||    
T  14668036 ttatcccactaagtggggtcggttacatggatcaaattacaccataatgtt 14667986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 20457038 - 20456988
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  20457038 ttatcccactaagtggggtcggctacatggatcaaatgacgccataatgtt 20456988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 29922549 - 29922499
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||| |||||||||  ||||||||||||||||||| ||||||||||    
T  29922549 ttatcccaccaagtgaggttggctacatggatcaaattacgccataatgtt 29922499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 38132601 - 38132551
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| || |||||||||||||||| ||||||||||    
T  38132601 ttatcccactaagtggggtcggccacatggatcaaattacgccataatgtt 38132551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 42272742 - 42272692
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  42272742 ttatcccactaagtggggtcagctacatggatcaaatgacgccataatgtt 42272692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 418052 - 418101
Alignment:
Q  281 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||| ||||| |||| ||||||||||||||||||| ||||||||||    
T  418052 tatcccaccaagtggggtcggctacatggatcaaattacgccataatgtt 418101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 7359281 - 7359328
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| |||| |||||||||||||||||||  |||||||||    
T  7359281 tcccactaagtggggtcagctacatggatcaaattacgtcataatgtt 7359328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 38105280 - 38105327
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 327  Q
    |||||||||| |||||||| | |||||||||||||||||| |||||||    
T  38105280 ttatcccacttagtgaggtacactacatggatcaaattacgccataat 38105327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 329
Target Start/End: Original strand, 41108752 - 41108795
Alignment:
Q  286 cactaagtgaggtccgctacatggatcaaattactccataatgt 329  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||    
T  41108752 cactaagtggggtcagctacatggatcaaattacgccataatgt 41108795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 1275529 - 1275479
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| ||  |||||||||    
T  1275529 ttatcccactaagtggggtcggctacatggatcaaatgacgtcataatgtt 1275479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 2915513 - 2915563
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  2915513 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 2915563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 318
Target Start/End: Complemental strand, 5558406 - 5558368
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaatta 318  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  5558406 ttatcccactaagtggggtcggctacatggatcaaatta 5558368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 7678742 - 7678692
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||| |||  |||||||||    
T  7678742 ttatcccactaagtggggtcggctacatggatcaaactacctcataatgtt 7678692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 9235311 - 9235262
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  9235311 ttatcccactaagtg-ggtcggctacatggatcaaattatgccataatgtt 9235262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 13561403 - 13561453
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  13561403 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 13561453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 319
Target Start/End: Complemental strand, 14666004 - 14665938
Alignment:
Q  254 tacaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattac 319  Q
    |||||||||||| || || ||||||  ||||||||||||||| |||| ||||||| |||||||||||    
T  14666004 tacaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattac 14665938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 318
Target Start/End: Complemental strand, 18855872 - 18855834
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaatta 318  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  18855872 ttatcccactaagtggggtcggctacatggatcaaatta 18855834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 29816647 - 29816597
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  29816647 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 29816597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 30213840 - 30213790
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  30213840 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 30213790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 30639733 - 30639783
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| || |||| ||||||||||||||||||| ||| ||||||    
T  30639733 ttatcccactaaatggggtcggctacatggatcaaattacaccacaatgtt 30639783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 38685232 - 38685182
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  38685232 ttatcccactaagtggggtcggctacatggatcaaatgacgccatattgtt 38685182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 39322096 - 39322142
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataa 326  Q
    ||||||||||||||| | || ||||||||||||||||||| ||||||    
T  39322096 ttatcccactaagtgggatcggctacatggatcaaattacgccataa 39322142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 42576275 - 42576225
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||  |||| ||||||||||||||||||| |||| |||||    
T  42576275 ttatcccactaagtcgggtcggctacatggatcaaattacgccattatgtt 42576225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 408511 - 408556
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccata 325  Q
    ||||||||||||||| |||| |||||||||||||||| || |||||    
T  408511 ttatcccactaagtggggtcggctacatggatcaaatgacgccata 408556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 11069180 - 11069229
Alignment:
Q  281 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||| ||| |||| |||| |||||||||||||| ||||||||||    
T  11069180 tatcccactatgtggggtcagctatatggatcaaattacgccataatgtt 11069229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 3302109 - 3302073
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  3302109 ttatcccactaagtggggtcggctacatggatcaaat 3302073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 4496649 - 4496613
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  4496649 ttatcccactaagtggggtcggctacatggatcaaat 4496613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 5860099 - 5860051
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatg 328  Q
    ||||||||||||||  |||| ||||||| ||||||||||| ||||||||    
T  5860099 ttatcccactaagtagggtcggctacatagatcaaattacgccataatg 5860051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 10639593 - 10639517
Alignment:
Q  255 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||| || || ||||||  ||||||||| ||||| |||| |||||||||||||||| || ||||| ||||    
T  10639593 acaacaacaacaacaacaaccaagccttatcccacaaagtggggtcggctacatggatcaaatgacgccatagtgtt 10639517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 9531617 - 9531667
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  9531617 ttatcccactaagtggggtcggctacatggatcaaattacgccataatgtt 9531667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 887081 - 887132
Alignment:
Q  279 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||| ||||| |||| ||||||||||||||||||| ||||||||||    
T  887081 attatcccaccaagtggggtcagctacatggatcaaattacgccataatgtt 887132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 3720435 - 3720482
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  3720435 tcccactaagtggggtcggctacatggatcaaattacaccataatgtt 3720482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 10516766 - 10516813
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataat 327  Q
    ||||||||||||||||| || ||||||||||||||||||| |||||||    
T  10516766 ttatcccactaagtgagatcagctacatggatcaaattacgccataat 10516813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 11412975 - 11412925
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||| |||||||||| || ||||||||||||||||||| ||||||||||    
T  11412975 ttatcctactaagtgagttcggctacatggatcaaattacaccataatgtt 11412925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 12520079 - 12520129
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  12520079 ttatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 12520129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 12882062 - 12882112
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||||||  ||||||||||||||||||| ||| ||||||    
T  12882062 ttatcccactaagtgaggtaggctacatggatcaaattacgccaaaatgtt 12882112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 18959176 - 18959126
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||||||||||||||||  ||||||||||    
T  18959176 ttatcccactaagtggggtcagctacatggatcaaattatgccataatgtt 18959126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 25384734 - 25384684
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||||||  ||||||||||||||||||| ||||| ||||    
T  25384734 ttatcccactaagtgaggttggctacatggatcaaattacgccatagtgtt 25384684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 33504489 - 33504439
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||| |||||||||||||| ||||||||||    
T  33504489 ttatcccactaagtggggtcggctagatggatcaaattacgccataatgtt 33504439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 43573147 - 43573193
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataa 326  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  43573147 ttatcccactaagtggggtcggctacatggatcaaattacgccataa 43573193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 39709219 - 39709268
Alignment:
Q  281 tatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  39709219 tatcccactaagtggggtcggctacatggatcaaattacgccatagtgtt 39709268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 440981 - 440929
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgttgt 332  Q
    ||||||| |||||||  ||| ||||||||||||||||||| ||||||||||||    
T  440981 ttatccctctaagtggagtcagctacatggatcaaattacgccataatgttgt 440929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 3635314 - 3635390
Alignment:
Q  255 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||| || || ||||||  ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  3635314 acaacaacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 3635390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 12734991 - 12734915
Alignment:
Q  255 acaacaacaacgacgacgaccaaga-ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||| || || ||||||  ||||||||||||||| ||||  |||||||||||||||||| ||||| ||||    
T  12734991 acaacaacaacaacaacaaccaagccttatcccactaagtggggtcgactacatggatcaaattacaccatagtgtt 12734915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 3481412 - 3481369
Alignment:
Q  287 actaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||    
T  3481412 actaagtggggtcagctacatggatcaaattacgccataatgtt 3481369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 9496128 - 9496081
Alignment:
Q  283 tcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||| |||  ||||||||||||||||||| ||||||||||    
T  9496128 tcccactaagtggggttggctacatggatcaaattacgccataatgtt 9496081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 45543089 - 45543140
Alignment:
Q  279 attatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||||||||||| |||| ||||||| ||||||| ||| ||||||||||    
T  45543089 attatcccactaagtggggtcggctacatagatcaaagtacgccataatgtt 45543140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 227454 - 227404
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  227454 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 227404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 4807860 - 4807810
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  4807860 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 4807810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 11992125 - 11992175
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||| |||||||||| |||| |||||||||||||||| || ||||||||||    
T  11992125 ttattccactaagtggggtcagctacatggatcaaataacgccataatgtt 11992175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 12474944 - 12474994
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  12474944 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 12474994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 17670733 - 17670683
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  17670733 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 17670683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 28508943 - 28508893
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  28508943 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 28508893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 30306297 - 30306247
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  30306297 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 30306247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 38435217 - 38435167
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||| |||||||||| | || ||||||||||||||||||| ||||||||||    
T  38435217 ttatgccactaagtgggatcggctacatggatcaaattacgccataatgtt 38435167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 16521024 - 16521061
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaatt 317  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  16521024 ttatcccactaagtggggtcggctacatggatcaaatt 16521061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 32364947 - 32364988
Alignment:
Q  289 taagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||    
T  32364947 taagtgaggtcagctacattgatcaaattacaccataatgtt 32364988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 3030943 - 3030892
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgttgt 332  Q
    ||||||||||||||| |||| ||||||||||| ||||||  ||||||||||||    
T  3030943 ttatcccactaagtggggtc-gctacatggataaaattatgccataatgttgt 3030892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 8181045 - 8181009
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  8181045 ttatcccactaagtggggtcggctacatggatcaaat 8181009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 25834943 - 25834907
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  25834943 ttatcccactaagtggggtcggctacatggatcaaat 25834907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 38328387 - 38328423
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  38328387 ttatcccactaagtggggtcggctacatggatcaaat 38328423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 41763060 - 41763096
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  41763060 ttatcccactaagtggggtcggctacatggatcaaat 41763096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 596 - 546
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  596 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 3702 - 3652
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| ||||| |||||||||||||  |||||||||    
T  3702 ttatcccactaagtggggtcggctacttggatcaaattacgtcataatgtt 3652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0392 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 6789 - 6839
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||  ||||||||||||||||||  ||||||||||    
T  6789 ttatcccactaagtggggttggctacatggatcaaattatgccataatgtt 6839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 28906 - 28956
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||| |||| |||||||||||||||| || ||||| ||||    
T  28906 ttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgtt 28956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 330
Target Start/End: Original strand, 58243 - 58293
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    ||||||||||||||  |||| |||||||||||||||||||  |||||||||    
T  58243 ttatcccactaagttgggtcggctacatggatcaaattacgacataatgtt 58293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 330
Target Start/End: Complemental strand, 14871 - 14798
Alignment:
Q  258 acaacaacgacgacgaccaagatt-atcccactaagtgaggtccgctacatggatcaaattactccataatgtt 330  Q
    |||||||| || || ||||||||| ||||||||| ||| |||  ||||||||||||||||||| ||||| ||||    
T  14871 acaacaacaacaacaaccaagatttatcccactacgtggggttggctacatggatcaaattacgccatagtgtt 14798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 25549 - 25585
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  25549 ttatcccactaagtggggtccgctacatggattaaat 25585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 31733 - 31697
Alignment:
Q  280 ttatcccactaagtgaggtccgctacatggatcaaat 316  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  31733 ttatcccactaagtggggtcggctacatggatcaaat 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University