View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13780_low_15 (Length: 224)
Name: NF13780_low_15
Description: NF13780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13780_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 50325784 - 50325977
Alignment:
| Q |
20 |
gtgtgcttctatctaatatgtgaatttggcaattttccaataattagggactattttatagttttatgtaataatttattaatgctgaacttgtatagca |
119 |
Q |
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| T |
50325784 |
gtgtgcttctatataatatgtgaatttggcaattttccaataattagggactattttatagttttatgtaataatttattaattctgaacttgtatagca |
50325883 |
T |
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| Q |
120 |
tatgcgagtatgtctacatttcgcgtagcacgtgctacatgtgtttacgttcaataacttattttctttaattattgcgtataagaattatcta |
213 |
Q |
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| T |
50325884 |
tatgcgagtatgtccacatttcacgtagcacgtgccacatgtgtttacgttcaataacttattttctttaattattgcgtataagaattatcta |
50325977 |
T |
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