View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13782_high_20 (Length: 293)
Name: NF13782_high_20
Description: NF13782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13782_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 27 - 277
Target Start/End: Complemental strand, 10307101 - 10306851
Alignment:
| Q |
27 |
tagaaaaccgatccaactcttccctttccatactcattatcatcaccttttccagataccaattccaaagtatcaagaatctgtttaggcaaactcacag |
126 |
Q |
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| T |
10307101 |
tagaaaactgatccaactcttccctttccatactcattatcatcaccttttccagataccaattccaaagtatcaagaatctgtttaggcaaactcacag |
10307002 |
T |
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| Q |
127 |
cataaccgatcaaactagtcgccatagccgaaaaagcaaatccttgaacagcagataaagcagaaggattcacagaaagcaaaagggtaataggatcacc |
226 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10307001 |
cataaccgatcaaactggtcgccatagccgaaaaagcaaatccttgaacagcagataaagcagaaggattcacagaaagcaaaagggtaataggatcacc |
10306902 |
T |
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| Q |
227 |
aacaaagtctggacctttattagctccaacaagtcccaacactatcaaatt |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10306901 |
aacaaagtctggacctttattagctccaacaagtcccaacactatcaaatt |
10306851 |
T |
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