View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13783_low_40 (Length: 224)
Name: NF13783_low_40
Description: NF13783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13783_low_40 |
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Alignment Details
Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 27741368 - 27741172
Alignment:
| Q |
17 |
attaagaaccattggtataacaaaattgagaaccattcattggtgtaacatagctacaaggtttattagtattaagatttttccac--tctttttgcaat |
114 |
Q |
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| T |
27741368 |
attaagaaccattggtataacaaaattgagaaccattcattgttgtaacatagctacaaggtttattagtattaagatttttccactttttttttgcaat |
27741269 |
T |
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| Q |
115 |
agacac--aattgaataaaacaatacactatttcttccaattcccagnnnnnnnncaatcccttcattcatcactgcacgcacgagcttgaggatatt |
210 |
Q |
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| T |
27741268 |
agacacaaaattgaataaaacaatacacagtttcttccaattccaag-agtttttcaatcccttcattcatcactgcacgcacgagcttgaggatatt |
27741172 |
T |
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