View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13786_low_1 (Length: 634)

Name: NF13786_low_1
Description: NF13786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13786_low_1
NF13786_low_1
[»] chr7 (35 HSPs)
chr7 (1-220)||(1366021-1366240)
chr7 (14-220)||(25610091-25610297)
chr7 (4-220)||(26633378-26633594)
chr7 (4-202)||(26282391-26282591)
chr7 (4-220)||(36438184-36438400)
chr7 (4-217)||(40001547-40001745)
chr7 (6-130)||(32956792-32956916)
chr7 (4-217)||(773719-773933)
chr7 (4-220)||(41852134-41852349)
chr7 (5-98)||(33910080-33910174)
chr7 (12-217)||(42312032-42312238)
chr7 (4-129)||(44893952-44894078)
chr7 (4-130)||(7636247-7636375)
chr7 (6-130)||(12251210-12251335)
chr7 (4-220)||(30739138-30739356)
chr7 (4-206)||(46221550-46221752)
chr7 (39-220)||(40841075-40841259)
chr7 (4-128)||(18015504-18015631)
chr7 (4-130)||(36796293-36796421)
chr7 (4-92)||(7366702-7366790)
chr7 (4-220)||(40737834-40738040)
chr7 (6-89)||(18895361-18895444)
chr7 (4-218)||(41908193-41908407)
chr7 (39-220)||(28589978-28590157)
chr7 (12-130)||(33419039-33419158)
chr7 (6-124)||(44876087-44876202)
chr7 (4-123)||(4099983-4100104)
chr7 (4-123)||(6380013-6380133)
chr7 (4-98)||(11672601-11672696)
chr7 (4-130)||(42161044-42161169)
chr7 (24-220)||(3799596-3799789)
chr7 (4-64)||(9479142-9479202)
chr7 (4-56)||(8358291-8358343)
chr7 (164-220)||(28105789-28105845)
chr7 (171-220)||(44002766-44002815)
[»] chr2 (34 HSPs)
chr2 (7-220)||(17117478-17117691)
chr2 (4-216)||(18172779-18172989)
chr2 (6-217)||(38985545-38985756)
chr2 (4-217)||(18915889-18916103)
chr2 (4-220)||(15457515-15457732)
chr2 (4-217)||(21747067-21747279)
chr2 (4-220)||(36059738-36059954)
chr2 (4-130)||(18676232-18676360)
chr2 (4-220)||(13997329-13997544)
chr2 (4-130)||(19367341-19367468)
chr2 (4-209)||(1418924-1419129)
chr2 (4-217)||(39081413-39081624)
chr2 (4-130)||(26151669-26151796)
chr2 (4-130)||(38599417-38599541)
chr2 (4-130)||(2063820-2063947)
chr2 (4-130)||(41096459-41096587)
chr2 (7-130)||(42759678-42759802)
chr2 (4-130)||(13020438-13020565)
chr2 (4-130)||(45618992-45619118)
chr2 (4-206)||(29480484-29480686)
chr2 (4-130)||(7993647-7993775)
chr2 (4-123)||(4856008-4856128)
chr2 (6-130)||(31273089-31273213)
chr2 (4-95)||(34061813-34061905)
chr2 (4-129)||(25222338-25222464)
chr2 (4-90)||(27302491-27302577)
chr2 (4-206)||(42411406-42411607)
chr2 (8-206)||(1226114-1226312)
chr2 (4-83)||(6530674-6530754)
chr2 (23-126)||(36481428-36481532)
chr2 (7-124)||(13001655-13001772)
chr2 (4-123)||(45042404-45042525)
chr2 (4-130)||(12269440-12269566)
chr2 (67-130)||(38599593-38599655)
[»] chr5 (32 HSPs)
chr5 (1-220)||(3349562-3349781)
chr5 (4-220)||(43511633-43511849)
chr5 (6-220)||(20976002-20976216)
chr5 (4-220)||(29156205-29156421)
chr5 (4-217)||(17513772-17513985)
chr5 (4-213)||(42291719-42291930)
chr5 (4-220)||(5829400-5829612)
chr5 (4-217)||(10591109-10591322)
chr5 (9-206)||(4734428-4734626)
chr5 (4-220)||(7390234-7390449)
chr5 (4-130)||(40956328-40956454)
chr5 (4-209)||(17325859-17326065)
chr5 (4-209)||(33281689-33281894)
chr5 (4-130)||(13474645-13474772)
chr5 (4-130)||(13656225-13656352)
chr5 (4-209)||(18873472-18873680)
chr5 (4-91)||(138159-138246)
chr5 (4-130)||(19099236-19099363)
chr5 (12-208)||(10033570-10033770)
chr5 (42-214)||(8379282-8379453)
chr5 (4-220)||(27351364-27351580)
chr5 (4-130)||(12661324-12661451)
chr5 (4-98)||(931395-931484)
chr5 (4-97)||(13423879-13423973)
chr5 (4-130)||(26377695-26377823)
chr5 (164-217)||(4177375-4177428)
chr5 (6-97)||(40779209-40779298)
chr5 (164-220)||(13288618-13288674)
chr5 (4-65)||(16515539-16515600)
chr5 (171-206)||(13424046-13424081)
chr5 (166-220)||(16515682-16515736)
chr5 (6-83)||(36718535-36718614)
[»] chr3 (39 HSPs)
chr3 (385-627)||(25928403-25928662)
chr3 (4-213)||(48626869-48627078)
chr3 (45-217)||(43905689-43905861)
chr3 (4-217)||(27303202-27303413)
chr3 (4-220)||(7767078-7767297)
chr3 (4-216)||(46904757-46904969)
chr3 (4-124)||(51939483-51939605)
chr3 (4-130)||(25599009-25599135)
chr3 (4-92)||(36538147-36538235)
chr3 (4-92)||(42009223-42009311)
chr3 (4-127)||(13401474-13401599)
chr3 (4-127)||(15987215-15987338)
chr3 (4-130)||(52655045-52655172)
chr3 (4-130)||(28132658-28132784)
chr3 (4-128)||(18408206-18408331)
chr3 (4-92)||(50677275-50677363)
chr3 (4-130)||(24252635-24252762)
chr3 (4-130)||(21784705-21784833)
chr3 (4-65)||(41707043-41707104)
chr3 (4-90)||(29387716-29387803)
chr3 (4-130)||(46791619-46791746)
chr3 (4-118)||(54430567-54430682)
chr3 (4-130)||(8364187-8364315)
chr3 (4-92)||(21596350-21596438)
chr3 (4-99)||(40152084-40152179)
chr3 (7-90)||(6715457-6715540)
chr3 (1-98)||(1255007-1255102)
chr3 (4-121)||(19965812-19965929)
chr3 (4-128)||(23164496-23164621)
chr3 (7-130)||(27729691-27729815)
chr3 (4-217)||(51146952-51147165)
chr3 (11-130)||(23067646-23067767)
chr3 (67-130)||(27110794-27110857)
chr3 (4-86)||(1649798-1649880)
chr3 (171-220)||(21596516-21596565)
chr3 (4-97)||(20762064-20762158)
chr3 (266-329)||(25930692-25930751)
chr3 (164-217)||(40151966-40152019)
chr3 (4-65)||(4207346-4207403)
[»] chr6 (26 HSPs)
chr6 (1-220)||(1092874-1093092)
chr6 (1-217)||(29308303-29308519)
chr6 (4-217)||(30915197-30915415)
chr6 (14-220)||(6294279-6294487)
chr6 (4-128)||(6754221-6754346)
chr6 (4-220)||(3748401-3748617)
chr6 (4-217)||(31861016-31861214)
chr6 (4-128)||(2618370-2618495)
chr6 (4-130)||(628018-628144)
chr6 (7-98)||(11088564-11088655)
chr6 (4-130)||(6360775-6360901)
chr6 (4-98)||(12614670-12614765)
chr6 (4-202)||(21946122-21946317)
chr6 (4-130)||(22503758-22503885)
chr6 (4-125)||(29401155-29401277)
chr6 (4-130)||(57703-57830)
chr6 (4-129)||(29149418-29149544)
chr6 (7-98)||(3514804-3514896)
chr6 (4-130)||(7525089-7525215)
chr6 (4-118)||(19231627-19231741)
chr6 (163-220)||(1690550-1690607)
chr6 (8-99)||(350433-350524)
chr6 (4-64)||(1690622-1690682)
chr6 (4-58)||(14893412-14893466)
chr6 (164-220)||(11088746-11088802)
chr6 (171-206)||(3514698-3514733)
[»] chr4 (28 HSPs)
chr4 (1-220)||(55134220-55134440)
chr4 (4-197)||(45172502-45172694)
chr4 (4-217)||(34982239-34982452)
chr4 (4-217)||(35653816-35654029)
chr4 (4-130)||(5545344-5545470)
chr4 (4-111)||(21791490-21791596)
chr4 (4-130)||(19661394-19661521)
chr4 (4-124)||(32130718-32130839)
chr4 (4-95)||(10575481-10575572)
chr4 (4-130)||(41038265-41038392)
chr4 (4-126)||(23256609-23256731)
chr4 (8-130)||(44478058-44478182)
chr4 (4-98)||(23426120-23426215)
chr4 (4-130)||(28463510-28463637)
chr4 (4-130)||(53011727-53011854)
chr4 (4-130)||(11681664-11681791)
chr4 (4-130)||(11689943-11690070)
chr4 (113-218)||(24449222-24449328)
chr4 (6-130)||(29579897-29580022)
chr4 (4-130)||(27632413-27632540)
chr4 (4-87)||(43154754-43154837)
chr4 (28-130)||(51066347-51066449)
chr4 (4-128)||(29221545-29221670)
chr4 (6-130)||(16072611-16072740)
chr4 (4-63)||(24449141-24449200)
chr4 (4-83)||(22423699-22423780)
chr4 (187-220)||(9925295-9925328)
chr4 (39-124)||(26328961-26329045)
[»] chr8 (29 HSPs)
chr8 (4-220)||(34523787-34524000)
chr8 (6-215)||(39697776-39697985)
chr8 (4-220)||(12531574-12531790)
chr8 (4-214)||(23567117-23567323)
chr8 (4-218)||(32098012-32098227)
chr8 (4-124)||(5869253-5869371)
chr8 (4-129)||(43926246-43926372)
chr8 (7-202)||(3628598-3628793)
chr8 (4-130)||(18420531-18420658)
chr8 (6-98)||(13585316-13585409)
chr8 (4-98)||(3471615-3471710)
chr8 (4-130)||(7858100-7858227)
chr8 (4-130)||(18112131-18112259)
chr8 (113-218)||(35875022-35875128)
chr8 (4-127)||(30915214-30915337)
chr8 (4-123)||(43967999-43968119)
chr8 (4-98)||(44665000-44665095)
chr8 (7-209)||(36514999-36515202)
chr8 (4-98)||(1004073-1004170)
chr8 (6-95)||(29372374-29372463)
chr8 (4-217)||(42076123-42076337)
chr8 (7-154)||(42777763-42777911)
chr8 (14-99)||(33452816-33452901)
chr8 (4-98)||(27074589-27074684)
chr8 (4-63)||(35874941-35875000)
chr8 (4-90)||(42951727-42951818)
chr8 (18-76)||(3575117-3575175)
chr8 (4-71)||(5971742-5971805)
chr8 (164-220)||(33452934-33452990)
[»] chr1 (41 HSPs)
chr1 (4-220)||(12971421-12971637)
chr1 (4-220)||(50371149-50371365)
chr1 (4-209)||(13120710-13120915)
chr1 (4-217)||(27703370-27703578)
chr1 (4-130)||(18127859-18127986)
chr1 (4-212)||(44836566-44836770)
chr1 (4-130)||(17674278-17674403)
chr1 (4-130)||(25930619-25930745)
chr1 (4-130)||(48722292-48722419)
chr1 (4-92)||(37873723-37873811)
chr1 (4-130)||(51110023-51110150)
chr1 (6-130)||(6150738-6150864)
chr1 (4-90)||(12884100-12884186)
chr1 (7-220)||(26486208-26486419)
chr1 (4-130)||(30004830-30004956)
chr1 (4-123)||(33124559-33124679)
chr1 (4-92)||(42740125-42740213)
chr1 (4-130)||(22-149)
chr1 (4-130)||(10109735-10109862)
chr1 (4-130)||(28885593-28885720)
chr1 (4-130)||(30899671-30899800)
chr1 (4-209)||(22386680-22386886)
chr1 (4-127)||(5560498-5560622)
chr1 (4-83)||(24556821-24556900)
chr1 (6-128)||(29208022-29208145)
chr1 (4-130)||(6333441-6333565)
chr1 (4-98)||(17487237-17487332)
chr1 (4-130)||(50552510-50552637)
chr1 (8-220)||(9777432-9777646)
chr1 (4-217)||(15441305-15441516)
chr1 (12-128)||(1269574-1269689)
chr1 (4-130)||(14084622-14084750)
chr1 (4-90)||(52055567-52055654)
chr1 (39-99)||(31369358-31369418)
chr1 (4-128)||(20905210-20905336)
chr1 (167-217)||(37873592-37873642)
chr1 (171-220)||(39080454-39080503)
chr1 (164-212)||(1269727-1269775)
chr1 (176-220)||(24556989-24557033)
chr1 (170-206)||(33124489-33124525)
chr1 (39-130)||(52240458-52240550)
[»] scaffold0181 (1 HSPs)
scaffold0181 (4-128)||(17056-17181)
[»] scaffold0126 (1 HSPs)
scaffold0126 (4-130)||(16725-16852)
[»] scaffold0564 (1 HSPs)
scaffold0564 (14-130)||(1086-1203)
[»] scaffold0035 (1 HSPs)
scaffold0035 (14-130)||(22727-22844)
[»] scaffold0100 (1 HSPs)
scaffold0100 (4-128)||(46099-46222)
[»] scaffold0606 (1 HSPs)
scaffold0606 (6-114)||(8332-8442)
[»] scaffold0034 (1 HSPs)
scaffold0034 (165-209)||(99092-99136)


Alignment Details
Target: chr7 (Bit Score: 155; Significance: 6e-82; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 1366021 - 1366240
Alignment:
Q  1 atgacttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacga 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  1366021 atgacttaatcagtcaatttgaaaagttatttcatagaaagaatcacaacaatcatttctttttcacataaaccattcgttttcccctttcccacaacgg 1366120  T
Q  101 ataagtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctga 200  Q
    |||| ||||| ||||||||||||||||| ||||| ||||||||||| ||||||||       |||||| |||||||||||| ||||||||||||||||||    
T  1366121 ataattgacatattcaaatgacaccgtttgtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttacaagctcttctgattctga 1366220  T
Q  201 ttttttaataaagcttagct 220  Q
    ||||||||||||||||||||    
T  1366221 ttttttaataaagcttagct 1366240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 25610091 - 25610297
Alignment:
Q  14 tcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagtgacaaat 113  Q
    |||||||||||||  ||||||| | |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||| | ||| |||||||||    
T  25610091 tcaatttgaaaagtcatttcattgaaagaatcacaacaatcatttctttttcacataaaccaatagttttcccctttcccacaatggataggtgacaaat 25610190  T
Q  114 tcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttttaataaag 213  Q
     |||| ||||||||||||||| |||| |||||| ||||||||       |||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  25610191 ccaaacgacaccgttagtaaattctatctctctttcacttaatttttttgtatttcgtttcatgtttggaagctcttctgattctgattttttaataaag 25610290  T
Q  214 cttagct 220  Q
    |||||||    
T  25610291 cttagct 25610297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 26633378 - 26633594
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||  |||||||||||| |||| ||||||||||| ||| ||     
T  26633378 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttctttttcgcataaaccattcatttttccctttcccacgacgtatg 26633477  T
Q  104 agtgacaaattcaaatgacaccgtt-agtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| | | |||| ||||||||| |||||| |  |||||||| ||||||||        |||||||||||||||||| | | ||||||||||||||||    
T  26633478 agtgac-attccaaacgacaccgttaagtaaatttcacctctctttcacttaattttattttattttgtttcatgtttagacgttcttctgattctgatt 26633576  T
Q  203 ttttaataaagcttagct 220  Q
    ||||||| ||||||||||    
T  26633577 ttttaatgaagcttagct 26633594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 4 - 202
Target Start/End: Complemental strand, 26282591 - 26282391
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacata--aaccattcgttttcccctttcccacaacgaa 101  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| | ||||  || ||||| ||||| |||||||||||||  |    
T  26282591 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttcttcatataaatcattcattttctcctttcccacaacata 26282492  T
Q  102 taagtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgat 201  Q
    ||||||| |||| |||||||||| ||||||||| ||||||||||| ||||||||       ||||||  ||||||||||| || ||||||||||||||||    
T  26282491 taagtgaaaaatacaaatgacactgttagtaaattctacctctctttcacttaatttttttgtatttcatttcatgtttagaaactcttctgattctgat 26282392  T
Q  202 t 202  Q
    |    
T  26282391 t 26282391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 36438400 - 36438184
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||| | ||||||| | ||||||||||||||| |||| ||||| ||||||||||||||||||||| ||||| || ||| |      
T  36438400 acttaatcagtcaatttgaaaaaccatttcattgaaagaatcacaacaataatttatttttcacataaaccattcgttttcccttttcctacgacgtagg 36438301  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| | | ||||||||||||||| ||||| |  |||| ||| ||||||||        | |||||||||||||||||||| ||||||||||||||||    
T  36438300 agtgac-attccaaatgacaccgttaggtaaatttcacctatctttcacttaattttattttgttttgtttcatgtttaaaagttcttctgattctgatt 36438202  T
Q  203 ttttaataaagcttagct 220  Q
    ||||||| ||||||||||    
T  36438201 ttttaatgaagcttagct 36438184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 40001745 - 40001547
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||               ||||||||||||| ||||||||||||||| |||    
T  40001745 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca---------------aaccattcgtttttccctttcccacaacggata 40001661  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
    ||||||||||||||| ||| ||||||||||| || |||||||| ||||||||       |||||| |||||||||||| |||||||||| |||||  |||    
T  40001660 agtgacaaattcaaacgacgccgttagtaaattccacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttctaattctatttt 40001561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 32956792 - 32956916
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataag 105  Q
    |||||||||||||||  |||| |||||||| | ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||| || ||    
T  32956792 ttaatcagtcaatttataaagttatttcattgaaagaatcacaacaatgatttctttttcgcataaaccattcgttttcccctttcccacaacggatgag 32956891  T
Q  106 tgacaaattcaaatgacaccgttag 130  Q
    |||||||| |||| ||||| |||||    
T  32956892 tgacaaatccaaacgacactgttag 32956916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 773933 - 773719
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttt--tacataaaccattcgttttcccctttcccacaacgaa 101  Q
    |||| |||||||||||||||||||||||| || | |||||||||||||||||||| |||||  | ||||||||||||||||| |||||||| |||||| |    
T  773933 actttatcagtcaatttgaaaagctattttattgaaagaatcacaacaatcattttttttttgtgcataaaccattcgtttt-ccctttccaacaacgga 773835  T
Q  102 taagtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctga 200  Q
      ||| ||||||||||| ||| |||||| ||||| |  || ||||| ||||||||        ||||| |||||||||||| ||| |||||||||| |||    
T  773834 ggagtcacaaattcaaacgacgccgttaggtaaatttcacatctctttcacttaattttttt-tatttcgtttcatgtttagaagttcttctgattttga 773736  T
Q  201 ttttttaataaagctta 217  Q
    ||||||||| |||||||    
T  773735 ttttttaatgaagctta 773719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 41852349 - 41852134
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||| ||||||||||| || || |||||||| | ||||||| ||||| ||||||||||||| ||||||  |||| ||||||||||| |||||||| |      
T  41852349 acttactcagtcaatttaaagagttatttcattgaaagaatcgcaacactcatttcttttttgcataaataattcattttccccttttccacaacggagg 41852250  T
Q  104 agtgacaaattcaaatgacaccgttag-taaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    ||||||||||||||| ||||||||||| |||| |  || ||||| ||||||||        ||||| |||| | ||||||||| ||||||||||||||||    
T  41852249 agtgacaaattcaaacgacaccgttagataaatttcacatctctttcacttaatttttt--tatttcgtttgacgtttaaaagttcttctgattctgatt 41852152  T
Q  203 ttttaataaagcttagct 220  Q
    | ||||| || |||||||    
T  41852151 tcttaatgaaacttagct 41852134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 33910080 - 33910174
Alignment:
Q  5 cttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaac 98  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||    
T  33910080 cttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaac 33910174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 42312032 - 42312238
Alignment:
Q  12 agtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagtgacaa 111  Q
    ||||||||||||||||||||||||   ||||||||||||| |||||| |||||  | ||||  |||||||||||||||| |||||||| || || |||||    
T  42312032 agtcaatttgaaaagctatttcattaaaagaatcacaacagtcatttatttttcgcttaaataattcgttttccccttt-ccacaacggatgagcgacaa 42312130  T
Q  112 attcaaatgacaccgtt-agtaaactctacctctctgtcacttaa-nnnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttttaat 209  Q
    ||  ||| ||||||||| |||||| |  |||||||| ||||||||         ||||| |||||||||||| ||| |||||||||||| ||||||||||    
T  42312131 atctaaacgacaccgttaagtaaatttcacctctctttcacttaattttttttttatttcgtttcatgtttagaagttcttctgattctaattttttaat 42312230  T
Q  210 aaagctta 217  Q
     |||||||    
T  42312231 gaagctta 42312238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 44894078 - 44893952
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||| |||||||| |||||||||| || | |||||||||||||||||||| ||| || |||||||||||||||||| |||||| ||||| | ||     
T  44894078 acttaatcaatcaatttggaaagctattttattgaaagaatcacaacaatcatttttttcttcacataaaccattcgttttacccttttccacagcaaag 44893979  T
Q  103 aagtgacaaattcaaatgacaccgtta 129  Q
     ||| ||||||||||| ||||||||||    
T  44893978 gagttacaaattcaaacgacaccgtta 44893952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 7636375 - 7636247
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt--tttacataaaccattcgttttcccctttcccacaacgaa 101  Q
    |||||||||||||||||||||||||||||||| | ||||||| |||||||||||| |||  ||  ||||| ||||||||||| |||||| |||||||  |    
T  7636375 acttaatcagtcaatttgaaaagctatttcattgaaagaatcgcaacaatcattttttttcttcccataagccattcgttttacccttttccacaacaga 7636276  T
Q  102 taagtgacaaattcaaatgacaccgttag 130  Q
      ||||||||||||||| || ||||||||    
T  7636275 agagtgacaaattcaaacgataccgttag 7636247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 12251335 - 12251210
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaataa 104  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||  |  |    
T  12251335 ttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagagga 12251236  T
Q  105 gtgacaaattcaaatgacaccgttag 130  Q
    ||||||||| |||| | |||||||||    
T  12251235 gtgacaaatccaaacgtcaccgttag 12251210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 30739138 - 30739356
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||||||||||||||||| ||||||||   |||||||||||| |||||||| ||||  ||||||| ||| ||||||||||||  |||||||        
T  30739138 acttaatcagtcaatttgaaaagttatttcattaaaagaatcacaacgatcatttccttttcgcataaacaattagttttcccctttttcacaacggcgg 30739237  T
Q  104 agtgacaaattcaaatgacaccg-ttagtaaactctacctctctgtcac-ttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgat 201  Q
    |||||||||| |||||||||||| || ||||| |  |||||||| |||| || |        |||||  |||||||| || ||| |||||||||||||||    
T  30739238 agtgacaaatccaaatgacaccgtttggtaaatttcacctctctttcacttttattttattttatttcatttcatgtatagaagttcttctgattctgat 30739337  T
Q  202 tttttaataaagcttagct 220  Q
    |||||||| ||| ||||||    
T  30739338 tttttaatgaagtttagct 30739356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 206
Target Start/End: Complemental strand, 46221752 - 46221550
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaac-gaa 101  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| || ||| ||||||| |||    
T  46221752 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttattcgcataaaccattcgttttaccattttccacaacagaa 46221653  T
Q  102 taagtgacaaattcaaatgacaccgttag-taaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctga 200  Q
     || |||||||| ||||||| | |||||| |||| | |||  |||| ||||||||        || ||| ||||||||||| ||| |||||| |||||||    
T  46221652 gaa-tgacaaatccaaatgatatcgttagataaattttac--ctctttcacttaatttttttttaatttctttcatgtttagaagttcttctaattctga 46221556  T
Q  201 tttttt 206  Q
    ||||||    
T  46221555 tttttt 46221550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 39 - 220
Target Start/End: Complemental strand, 40841259 - 40841075
Alignment:
Q  39 aagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagtgacaaattcaaatgacaccgttagtaaactct 138  Q
    |||||| |||||| ||||||||||||  |||||||||||||||||||||||||| |||||| | ||||||||||| |||| || ||| |||| ||| | |    
T  40841259 aagaattacaacactcatttctttttcgcataaaccattcgttttcccctttcctacaacggagaagtgacaaatccaaacgagaccattaggaaaattt 40841160  T
Q  139 -acctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctga--ttttttaataaagcttagct 220  Q
     |||| ||| ||| |||         ||||| |||||||||||| ||| |||||| |||||||  ||||||||||||||||||||    
T  40841159 cacctatctttcaattattttttttttatttcgtttcatgtttagaagttcttctaattctgattttttttaataaagcttagct 40841075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 18015631 - 18015504
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttta---cataaaccattcgttttcccctttcccacaacga 100  Q
    ||||||||| |||||||| ||||||||||||| | ||||||||||||||| |||| |||||     ||| ||||||||||||| ||||||  ||||||      
T  18015631 acttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaattatttttttttcttcgcattaaccattcgttttacccttttacacaacag 18015532  T
Q  101 ataagtgacaaattcaaatgacaccgtt 128  Q
    | |||||||||||||||| |||||||||    
T  18015531 aaaagtgacaaattcaaacgacaccgtt 18015504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 36796421 - 36796293
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt--tttacataaaccattcgttttcccctttcccacaacgaa 101  Q
    |||||||||||||||||| |||  |||||||| | |||||||||||||||||||| |||  ||  ||||||||||||||||| |||||| |||||||  |    
T  36796421 acttaatcagtcaatttggaaaattatttcattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgttttacccttttccacaacaga 36796322  T
Q  102 taagtgacaaattcaaatgacaccgttag 130  Q
      ||||||||||  ||| |||||||||||    
T  36796321 ggagtgacaaatcaaaacgacaccgttag 36796293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 7366702 - 7366790
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcc 92  Q
    |||||||  ||||||||||||| |||||| || | ||||||||||||||| ||||||||||  |||||||||||| |||||||||||||    
T  7366702 acttaatttgtcaatttgaaaaactattttattgaaagaatcacaacaattatttctttttcgcataaaccattcattttcccctttcc 7366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 40738040 - 40737834
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||||||||||| ||||||||||| || | |||||||||||         ||||||  ||||||| |||||||||||||||||| || ||| |      
T  40738040 acttaatcagtcaatttaaaaagctattttattgaaagaatcacaa---------ctttttcgcataaactattcgttttcccctttcctacgacgtagg 40737950  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| | ||||||||||||||||| ||||| |  |||||||| |||||| |        ||||||||||||| |||||||| |||| ||||||||| |    
T  40737949 agtgac-atttcaaatgacaccgttaggtaaatttcacctctctttcactttattttattttattttgtttcat-tttaaaagttcttttgattctgact 40737852  T
Q  203 ttttaataaagcttagct 220  Q
    ||||||| ||||||||||    
T  40737851 ttttaatgaagcttagct 40737834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 18895444 - 18895361
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctt 89  Q
    ||||||||||||||| ||||| |||||||| | ||||||||||||||| ||||| ||||  ||||||| |||||||||||||||    
T  18895444 ttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaattatttccttttcgcataaacaattcgttttcccctt 18895361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 41908193 - 41908407
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||| |||||||| |||||| | ||||||||||||||||||||||||||  |||||| || |||| ||| |||||  ||| ||| |      
T  41908193 acttaatcagtcaattagaaaagctgtttcattgaaagaatcacaacaatcatttctttttcgcataaa-cactcgtattctcctttttcactacggagg 41908291  T
Q  104 agtgacaaattcaaatgacaccgttag-taaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctga-t 201  Q
    ||||||| || |||| || | |||||| |||| |  |||||| | ||||||||        |||||||||||||||||| ||| | |||||||||||| |    
T  41908292 agtgacagatccaaacgatatcgttagataaatttcacctctttttcacttaattttttt-tattttgtttcatgtttagaagtttttctgattctgatt 41908390  T
Q  202 tttttaataaagcttag 218  Q
    |||||||| ||||||||    
T  41908391 tttttaatgaagcttag 41908407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 39 - 220
Target Start/End: Complemental strand, 28590157 - 28589978
Alignment:
Q  39 aagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagtgacaaattcaaatgacaccgtta-gtaaactc 137  Q
    ||||||||||||||| ||||||||||  | ||| ||||||||||||||||||||||||||| |  |||||||||| |||| ||||  |||| ||||| |     
T  28590157 aagaatcacaacaattatttctttttcgcgtaa-ccattcgttttcccctttcccacaacggaggagtgacaaatccaaacgacattgttaggtaaaatt 28590059  T
Q  138 tacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttttaataaagcttagct 220  Q
     ||||||||  |||||||        |||||  ||||||||||| ||  ||||||||||||||||||||||| ||| ||||||    
T  28590058 cacctctcttccacttaatttttc--tatttcatttcatgtttagaaattcttctgattctgattttttaatgaagtttagct 28589978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 33419158 - 33419039
Alignment:
Q  12 agtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaataagtgaca 110  Q
    ||||||||||||||| |||||||| | ||||||||||| |||||||| ||| ||  ||||||||||||||||| || ||| | |||||  |  |||||||    
T  33419158 agtcaatttgaaaagttatttcattgaaagaatcacaataatcatttttttcttcgcataaaccattcgttttaccattttctacaacagaggagtgaca 33419059  T
Q  111 aattcaaatgacaccgttag 130  Q
    ||| |||| |||||||||||    
T  33419058 aatccaaacgacaccgttag 33419039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 44876202 - 44876087
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataag 105  Q
    |||||||||||||||  |||||||||||||   |||||||||||||||||||| ||||   ||||||||||||||||||||  || |||||| |||  ||    
T  44876202 ttaatcagtcaatttagaaagctatttcattaaaagaatcacaacaatcattt-ttttccgcataaaccattcgttttccc--tttccacaatgaaggag 44876106  T
Q  106 tgacaaattcaaatgacac 124  Q
    |||||||| |||| |||||    
T  44876105 tgacaaatccaaacgacac 44876087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 4099983 - 4100104
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcg-ttttcccctttcccacaacgaa 101  Q
    ||||||||| |||||||||||||||||||||| | |||||| ||||||||||||| ||| ||  || |||||||||| |||| |||||| |||||||  |    
T  4099983 acttaatcaatcaatttgaaaagctatttcattgaaagaattacaacaatcatttttttcttcgcaaaaaccattcgtttttacccttttccacaacaga 4100082  T
Q  102 taagtgacaaattcaaatgaca 123  Q
      |||||||||| |||| ||||    
T  4100083 ggagtgacaaatccaaacgaca 4100104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 6380133 - 6380013
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcat-ttcttttttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||| |||||||| ||  ||||||||| | |||||||||||||||||| || || ||  ||||||||||||||||| |||||| |||||||  |     
T  6380133 acttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaatcatatttttcttcgcataaaccattcgttttacccttttccacaacagag 6380034  T
Q  103 aagtgacaaattcaaatgaca 123  Q
     |||||||||| |||| ||||    
T  6380033 gagtgacaaatccaaacgaca 6380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 11672601 - 11672696
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaac 98  Q
    |||||||||||||||||| |||| |||||||  | |||||||||||||||||||| ||| ||  |||||| |||||||||| | |||| |||||||    
T  11672601 acttaatcagtcaatttggaaagttatttcaatgaaagaatcacaacaatcatttttttcttcgcataaatcattcgttttactcttttccacaac 11672696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 42161169 - 42161044
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||| |||||| |||||| ||||||||||||| | |||||||||| |||  |||| || ||  ||||||||||||||||| || ||| |||||||  |      
T  42161169 acttgatcagttaatttggaaagctatttcattgaaagaatcacagcaacaattt-ttcttcgcataaaccattcgttttacctttttccacaacagagg 42161071  T
Q  104 agtgacaaattcaaatgacaccgttag 130  Q
    |||||||||| |||| |||||||||||    
T  42161070 agtgacaaatccaaacgacaccgttag 42161044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 3799789 - 3799596
Alignment:
Q  24 aagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagtgacaaattcaaatgaca 123  Q
    |||||||||||| | |||||||||||||||||||| ||||   |||||||||||||||||     ||||||||| | |  || | ||||| |||| ||||    
T  3799789 aagctatttcattgaaagaatcacaacaatcattt-ttttccgcataaaccattcgttttagaaattcccacaatggaggagcg-caaatccaaacgaca 3799692  T
Q  124 ccgttag-taaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttttaataaagcttagct 220  Q
    ||||||| |||| |  |||||||| ||||||||        ||||| |||||||||||| ||| ||||||||||||||||||| ||| ||| ||||||    
T  3799691 ccgttaggtaaatttcacctctctttcacttaatttttt--tatttcgtttcatgtttagaagttcttctgattctgatttttaaatgaagtttagct 3799596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 9479142 - 9479202
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttt 64  Q
    ||||||||||||||||| |||| ||||||| | | ||||||||||||||| ||||||||||    
T  9479142 acttaatcagtcaatttaaaaaactatttcgttgaaagaatcacaacaattatttcttttt 9479202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 8358343 - 8358291
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcat 56  Q
    ||||||||||||||||| ||||| ||| |||| | ||||||||||||||||||    
T  8358343 acttaatcagtcaatttaaaaagttatctcattgaaagaatcacaacaatcat 8358291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 28105789 - 28105845
Alignment:
Q  164 tattttgtttcatgtttaaaagctcttctgattctgattttttaataaagcttagct 220  Q
    ||||| |||||||||||||||| | |||||||||| |||| ||||| ||||||||||    
T  28105789 tatttcgtttcatgtttaaaagtttttctgattctaatttcttaatgaagcttagct 28105845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 44002815 - 44002766
Alignment:
Q  171 tttcatgtttaaaagctcttctgattctgattttttaataaagcttagct 220  Q
    ||||||||||| ||| |||||||||| | |||||||||| ||||||||||    
T  44002815 tttcatgtttagaagttcttctgattataattttttaatgaagcttagct 44002766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 2e-78; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 7 - 220
Target Start/End: Complemental strand, 17117691 - 17117478
Alignment:
Q  7 taatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagt 106  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||    
T  17117691 taatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttctttttcatataaaccattcgttttcccctttcccacaacggataagt 17117592  T
Q  107 gacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatttttt 206  Q
    ||||||| |||| ||||||||||||||| ||||||||||| ||||||||       |||||| |||||||||||| ||||||||||||||||||||||||    
T  17117591 gacaaatccaaacgacaccgttagtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttctgattctgatttttt 17117492  T
Q  207 aataaagcttagct 220  Q
    ||||||||||||||    
T  17117491 aataaagcttagct 17117478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 18172989 - 18172779
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  18172989 acttaatcactcaatttgaaaagctatttcatcgaaagaatcacaacaatcatttctttttcacataaaccattcgttttcccctttcccacaacggata 18172890  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
    |||||||||| |||| ||| ||||| ||||| ||||||||||| ||||  ||       |||||| |||||||||||| || ||||||||||||||||||    
T  18172889 agtgacaaatccaaacgacgccgttggtaaattctacctctctttcac--aatttttttgtatttcgtttcatgtttagaaactcttctgattctgattt 18172792  T
Q  204 tttaataaagctt 216  Q
    |||||||||||||    
T  18172791 tttaataaagctt 18172779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 6 - 217
Target Start/End: Complemental strand, 38985756 - 38985545
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataag 105  Q
    ||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||| |||| |||||||||||| |||||||| |||||    
T  38985756 ttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaatcatttctttttcacataaaacatttgttttccccttttccacaacggataag 38985657  T
Q  106 tgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttt 205  Q
    |||||||| |||| ||| |||||||| || ||||| ||||| ||||||||       |||||| ||||||| |||| || ||||||||||||||||||||    
T  38985656 tgacaaatccaaaagacgccgttagtgaattctacatctctttcacttaatttttttgtatttcgtttcatttttagaaactcttctgattctgattttt 38985557  T
Q  206 taataaagctta 217  Q
    ||||||||||||    
T  38985556 taataaagctta 38985545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 18916103 - 18915889
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||| |||||||||||||||||||||  | |||||||||| ||||||||||||||| |||||||| ||| ||||| ||||||||||||||| |||    
T  18916103 acttaatcaatcaatttgaaaagctatttcactgaaagaatcacagcaatcatttctttttcacataaactatttgtttttccctttcccacaacggata 18916004  T
Q  104 agtgacaaattc-aaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    ||||| ||| || ||| ||| ||||||||||| ||||||||||| ||||||||       |||||| |||||||||||| ||||||||||||||||  ||    
T  18916003 agtgataaaatcgaaacgacgccgttagtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttctgattctattt 18915904  T
Q  203 ttttaataaagctta 217  Q
    |||||||||||||||    
T  18915903 ttttaataaagctta 18915889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 15457515 - 15457732
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttt-acataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||||| |||| |||||| ||| |||||||||||||||||||||||||||||| |     
T  15457515 acttaatcagtcaatttgaaaagctattttattgaaagaatcacaacaataattttttttttcacacaaaccattcgttttcccctttcccacaacggac 15457614  T
Q  103 aagtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    ||||||||||| |||| ||| | ||||||||| |||| |||||| ||||||||       || ||| |||||||||| | |||||||||| ||| |||||    
T  15457615 aagtgacaaatccaaacgacgctgttagtaaattctatctctctttcacttaatttttttgtttttcgtttcatgttcagaagctcttcttattttgatt 15457714  T
Q  203 ttttaataaagcttagct 220  Q
    ||||||||||||||||||    
T  15457715 ttttaataaagcttagct 15457732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 21747279 - 21747067
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||||||||||| |||  |||| |||| | ||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||  |||    
T  21747279 acttaatcagtcaatttaaaatactatgtcattgaaagaatcacaacaataatttctttttcacataaaccattcgtttttccctttcccacaacagata 21747180  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
    ||||| ||||||||| ||| ||||||||||| ||||||||||| ||||| ||       |||||| ||||||||||||||||||||| |||||||  |||    
T  21747179 agtgagaaattcaaacgacgccgttagtaaattctacctctctttcactgaa-ttttttgtatttcgtttcatgtttaaaagctcttttgattctatttt 21747081  T
Q  204 tttaataaagctta 217  Q
    ||||||||||||||    
T  21747080 tttaataaagctta 21747067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 36059954 - 36059738
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||||| ||||| |||||||||||||| | ||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||     
T  36059954 acttaatcagttaatttaaaaagctatttcattgaaagaaccacaacaatcatttcttttttgcataaaccattcgttttcccttttcccacgacgtatg 36059855  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| | | |||| ||| |||||| ||||| | ||||||||| ||||||||        |||||||||||||||||| ||| |||| ||| |||||||    
T  36059854 agtgac-attccaaacgacgccgttacgtaaattttacctctctttcacttaattttattttattttgtttcatgtttagaagttcttgtgaatctgatt 36059756  T
Q  203 ttttaataaagcttagct 220  Q
    ||||||| ||| ||||||    
T  36059755 ttttaatgaagtttagct 36059738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 18676360 - 18676232
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt--tttacataaaccattcgttttcccctttcccacaacgaa 101  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||||||||| |||  ||| ||||||||||||||||| |||||| ||||||   |    
T  18676360 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttctttgcataaaccattcgttttacccttttccacaaaaga 18676261  T
Q  102 taagtgacaaattcaaatgacaccgttag 130  Q
      ||||||||||||||| |||||||||||    
T  18676260 ggagtgacaaattcaaacgacaccgttag 18676232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 13997329 - 13997544
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||| |||||||||||||| ||||||||| | ||||||||||||||| ||||||||||  ||||||||||||||||| |||||||| || ||| ||     
T  13997329 acttaatgagtcaatttgaaaaactatttcattgaaagaatcacaacaattatttctttttcgcataaaccattcgtttt-ccctttcctacgacgtatg 13997427  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| | | ||||  ||||  ||| ||||| |  || ||||| ||||||||        ||||||||||  |||||||||| ||||||||||||||||    
T  13997428 agtgac-attccaaacaacacatttaggtaaatttcacatctctttcacttaatcttgttttattttgttttgtgtttaaaagttcttctgattctgatt 13997526  T
Q  203 ttttaataaagcttagct 220  Q
    ||||||| ||||||||||    
T  13997527 ttttaatgaagcttagct 13997544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 19367468 - 19367341
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| ||   |||||||||||||||| |||||| |||||||        
T  19367468 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccattcgttttacccttttccacaacagtg 19367369  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     ||||||||||||||| |||||||||||    
T  19367368 gagtgacaaattcaaacgacaccgttag 19367341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 209
Target Start/End: Original strand, 1418924 - 1419129
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||||  ||||||| |||| ||||  ||||||| |  ||| ||     
T  1418924 acttaatcagtcaatttgtaaagctatttcattgaaagaatcacaacaattatttctttttcgcataaactattcattttttcctttcctatgacgtatg 1419023  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| | | ||||||||||||||| ||||| |  || ||||| ||||||||        | |||||||||||||||||||| |||||||||| ||| |    
T  1419024 agtgac-attccaaatgacaccgttaggtaaatttcacttctctttcacttaattttattttgttttgtttcatgtttaaaagttcttctgattttgact 1419122  T
Q  203 ttttaat 209  Q
    |||||||    
T  1419123 ttttaat 1419129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 39081413 - 39081624
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||||||||||||| | |||||| |||||||| ||||| |||| | |||||||||| |||||||||||||| || ||| |      
T  39081413 acttaatcagtcaatttgaaaagctatttcattgaaagaattacaacaattatttc-ttttcatataaaccattagttttcccctttcctacgacgtagg 39081511  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
    |||||| | | ||||||||||  |  ||||| |  |||||||| ||||||||        | ||||||||||| |||||||| |||| ||||||||||||    
T  39081512 agtgac-attccaaatgacacattaggtaaatttcacctctctttcacttaattttattttgttttgtttcatatttaaaagttcttatgattctgattt 39081610  T
Q  204 tttaataaagctta 217  Q
    | |||| |||||||    
T  39081611 tataatgaagctta 39081624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 26151796 - 26151669
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| | |||||  |     
T  26151796 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttctacaacagag 26151697  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  26151696 gagtgacaaatccaaacgacaccgttag 26151669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 38599417 - 38599541
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||| |||||||||||| ||||||||| | |||||||| |||||| |||| |||||| ||||||||||||||||||||||||||||| ||| ||     
T  38599417 acttaatcaatcaatttgaaaaactatttcattgaaagaatcaaaacaattatttatttttt-cataaaccattcgttttcccctttcccacgacgtatg 38599515  T
Q  104 agtgacaaattcaaatgacaccgttag 130  Q
    |||| | | |||||| |||||||||||    
T  38599516 agtggc-atttcaaacgacaccgttag 38599541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 2063820 - 2063947
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttt-ttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||||    || |||||||||||||| || ||| |||||||  |     
T  2063820 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcccgcaaaaaccattcgttttacctttttccacaacagag 2063919  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     ||||||||||||||| |||||||||||    
T  2063920 gagtgacaaattcaaacgacaccgttag 2063947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 41096587 - 41096459
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt--tttacataaaccattcgttttcccctttcccacaacgaa 101  Q
    |||||||||||||||||| ||| ||||||||| | |||||||||||||||||||| |||  ||  ||| ||||||||||||| |||||| |||||||  |    
T  41096587 acttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatcattttttttcttcgcattaaccattcgttttacccttttccacaacaga 41096488  T
Q  102 taagtgacaaattcaaatgacaccgttag 130  Q
      |||||||||| |||| |||||||||||    
T  41096487 ggagtgacaaatccaaacgacaccgttag 41096459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 42759802 - 42759678
Alignment:
Q  7 taatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaataag 105  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| ||||||   |   |    
T  42759802 taatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaatagagggg 42759703  T
Q  106 tgacaaattcaaatgacaccgttag 130  Q
    ||||||||||||| |||||||||||    
T  42759702 tgacaaattcaaacgacaccgttag 42759678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 13020438 - 13020565
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| |||||||||||||   ||||||||||||||| |||| ||| ||  ||||||||||||||||| || |||  ||||||  |     
T  13020438 acttaatcagtcaatttggaaagctatttcatttaaagaatcacaacaataatttttttcttcgcataaaccattcgttttaccttttttcacaacagag 13020537  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     ||||| |||||||||||||||||||||    
T  13020538 gagtgaaaaattcaaatgacaccgttag 13020565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 45618992 - 45619118
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttta-cataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| || |||||||||| | |||||||||||||||||||| ||| ||  ||||||||||| ||||| |||||| |||||||  |     
T  45618992 acttaatcagtcaatttggaa-gctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatttgttttacccttttccacaacagag 45619090  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  45619091 gagtgacaaatccaaacgacaccgttag 45619118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 206
Target Start/End: Complemental strand, 29480686 - 29480484
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||| ||||||||||||||||  |||||||| | ||||||||||||||| ||||||||||  ||||||||||| || ||||||||||  || ||  |      
T  29480686 acttattcagtcaatttgaaaaattatttcattgaaagaatcacaacaattatttctttttcgcataaaccatttgtcttcccctttcttacgacatagg 29480587  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| | | |||| |||||||||| ||||| |  |||||||| ||||||||        | ||||||||| | |||||||| ||||||||||||||||    
T  29480586 agtgac-attccaaacgacaccgttaggtaaagttcacctctctttcacttaattttattttgttttgtttcgtatttaaaagttcttctgattctgatt 29480488  T
Q  203 tttt 206  Q
    ||||    
T  29480487 tttt 29480484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 7993647 - 7993775
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt--tttacataaaccattcgttttcccctttcccacaacgaa 101  Q
    |||||||||| ||||||| ||||||||||||| | |||||||||||||||| ||| |||  ||  ||||||||||||||||| |||||| ||||||   |    
T  7993647 acttaatcagccaatttggaaagctatttcattgaaagaatcacaacaatctttttttttcttcgcataaaccattcgttttacccttttccacaataga 7993746  T
Q  102 taagtgacaaattcaaatgacaccgttag 130  Q
      |||||||||| |||| |||||||||||    
T  7993747 ggagtgacaaatccaaacgacaccgttag 7993775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 4856008 - 4856128
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||| |||||| ||||||||||||| | |||||||||||||||||||| ||| ||  |||||||||||||||||  ||||| |||||||  |     
T  4856008 acttaatcagtgaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaaccttttccacaacagag 4856107  T
Q  103 aagtgacaaattcaaatgaca 123  Q
     |||||||||| |||| ||||    
T  4856108 gagtgacaaatccaaacgaca 4856128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 31273213 - 31273089
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataag 105  Q
    |||||||||||||||| ||  |||||||||   |||||||| |||| ||||||||||||  ||||||||||| ||||| | ||||||||||||  | |||    
T  31273213 ttaatcagtcaatttggaatactatttcattaaaagaatcataacattcatttctttttcgcataaaccatttgtttttctctttcccacaacagaaaag 31273114  T
Q  106 tgacaaattcaaatgacaccgttag 130  Q
    |||||||| |||| ||||| |||||    
T  31273113 tgacaaatccaaacgacacagttag 31273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 34061905 - 34061813
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccac 95  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| ||  |||||||||| |||||| |||||| ||||    
T  34061905 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatccgttttacccttttccac 34061813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 25222338 - 25222464
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||| |||||||||  |||| |||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| ||||||  ||||||  |     
T  25222338 acttaattagtcaatttagaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccctttttcacaacagag 25222437  T
Q  103 aagtgacaaattcaaatgacaccgtta 129  Q
     |||||||||||||||  |||||||||    
T  25222438 gagtgacaaattcaaacaacaccgtta 25222464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 27302577 - 27302491
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttccccttt 90  Q
    |||||||| |||||||||||||||||| ||||   |||||||||||||||||||| |||||  |||||||||||| ||||| |||||    
T  27302577 acttaatcggtcaatttgaaaagctatatcattaaaagaatcacaacaatcatttatttttcgcataaaccattcattttcaccttt 27302491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 206
Target Start/End: Complemental strand, 42411607 - 42411406
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctt-ttttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||| |||||||||| |||||||||||||   |||||||||||||||||||| ||  ||  ||||||||||||||||| ||||||  ||||||  |     
T  42411607 acttaattagtcaatttggaaagctatttcatttaaagaatcacaacaatcattttttacttcgcataaaccattcgttttaccctttttcacaacagag 42411508  T
Q  103 aagtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
     ||||| |||| |||| |||||||||||  || | || | |||| ||||||||        || ||| ||||||||||||||| ||||||||||||||||    
T  42411507 gagtgaaaaatccaaacgacaccgttagataaatttaac-ctctttcacttaattatttt-taatttctttcatgtttaaaagttcttctgattctgatt 42411410  T
Q  203 tttt 206  Q
    ||||    
T  42411409 tttt 42411406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 1226312 - 1226114
Alignment:
Q  8 aatcagtcaatttgaaaagctatttca-taggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagt 106  Q
    |||||| |||||||||||| ||||||| ||  ||||||||||||||||||||||||||  ||||||||||| |||||  |||  |||||||||||  | |    
T  1226312 aatcagacaatttgaaaagttatttcaataaaaagaatcacaacaatcatttctttttcgcataaaccatttgtttt--cctaccccacaacgaaggaat 1226215  T
Q  107 gacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttt 205  Q
     | |||| |||| |||| ||||| ||||| |  | |||||| ||||||||        ||||| |||||||||||| ||| |||||| ||||||||||||    
T  1226214 cataaatccaaacgacatcgttaggtaaatttcatctctctttcacttaatttttttttatttcgtttcatgtttagaagttcttctaattctgattttt 1226115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 6530674 - 6530754
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatt-tcttttttacataaaccattcgtttt 83  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||||||||| | || ||  |||||||||||||||||    
T  6530674 acttaatcagtcaatttgaaaaggtatttcattgaaagaatcacaacaatcattattttcttcgcataaaccattcgtttt 6530754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 36481428 - 36481532
Alignment:
Q  23 aaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaataagtgacaaattcaaatga 121  Q
    ||||||||||||| | |||||||||||||||||||| ||| ||  |||||||||||| |||| |||||| |||||||  |  |||||||||| |||| ||    
T  36481428 aaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcattttacccttttccacaacagaggagtgacaaatccaaacga 36481527  T
Q  122 caccg 126  Q
    |||||    
T  36481528 caccg 36481532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 13001655 - 13001772
Alignment:
Q  7 taatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagt 106  Q
    |||| |||||||||  |||||||||||||   ||||||||||| |||||||| ||||    ||| || |||||||||| ||||||||||||| ||  |||    
T  13001655 taattagtcaatttataaagctatttcattaaaagaatcacaataatcattttttttcagtatatacaattcgttttctcctttcccacaacaaaggagt 13001754  T
Q  107 gacaaattcaaatgacac 124  Q
    ||||||| |||| |||||    
T  13001755 gacaaatccaaacgacac 13001772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 45042404 - 45042525
Alignment:
Q  4 acttaatcagtcaatttg---aaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacg 99  Q
    ||||||||||||||||||   |||  ||||||||| | |||||||||||||||||||| ||| ||  |||||||||||||  || |||||| |||||||     
T  45042404 acttaatcagtcaatttggtgaaagtctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcg--ttacccttttccacaaca 45042501  T
Q  100 aataagtgacaaattcaaatgaca 123  Q
     |  ||||||||||||||| ||||    
T  45042502 gaggagtgacaaattcaaacgaca 45042525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 12269440 - 12269566
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||| | |||| |||||||||||||   || |||||| |||||||||| ||| || ||||||||||||||||||  | ||| ||||| |  |     
T  12269440 acttaatcagtga-tttggaaagctatttcattaaaaaaatcaccacaatcatttttttcttcacataaaccattcgttttatctttttccacagcagag 12269538  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     | ||||||||||||| |||||||||||    
T  12269539 gaatgacaaattcaaacgacaccgttag 12269566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 38599593 - 38599655
Alignment:
Q  67 cataaaccattcgttttcccctttcccacaacgaataagtgacaaattcaaatgacaccgttag 130  Q
    ||||||||||||||||||||||||||||| ||| || |||| | | |||||| |||||||||||    
T  38599593 cataaaccattcgttttcccctttcccacgacgtatgagtggc-atttcaaacgacaccgttag 38599655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 3e-77; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 3349781 - 3349562
Alignment:
Q  1 atgacttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacga 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||     
T  3349781 atgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatcatttctttttcacataaaccgttcgttttcccctttcccacaacgg 3349682  T
Q  101 ataagtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctga 200  Q
    ||||||||||||| ||||| |||||||||||||| | ||||||||| ||||| ||       |||||| |||||||||||| || |||||||||||||||    
T  3349681 ataagtgacaaatccaaatcacaccgttagtaaattatacctctctttcactcaagttttttgtatttagtttcatgtttagaaactcttctgattctga 3349582  T
Q  201 ttttttaataaagcttagct 220  Q
    ||||||||||||||||||||    
T  3349581 ttttttaataaagcttagct 3349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 43511633 - 43511849
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||| |||    
T  43511633 acttaatcagtcaatttgaaaagctatttcatggaaagaatcacaacaatcatttctttttcatataaaccattcgtttttccctttcccacaacggata 43511732  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
    |||||||||| |||| ||||||||||||||| ||||||||||| ||||||||       |||||| |||||||||||| ||||||| |||||||||||||    
T  43511733 agtgacaaatccaaacgacaccgttagtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctctgctgattctgattt 43511832  T
Q  204 tttaataaagcttagct 220  Q
    |||||||||||||||||    
T  43511833 tttaataaagcttagct 43511849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 20976002 - 20976216
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataag 105  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||  ||||||||||||| |||||    
T  20976002 ttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttctttttcacataaactattcgttttcgtctttcccacaacggataag 20976101  T
Q  106 tgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttt 205  Q
    |||||||| |||||||||||||||||||| ||||||||||| ||||||||       |||||| |||  |||||||||||||||||||||| ||||||||    
T  20976102 tgacaaatccaaatgacaccgttagtaaattctacctctctttcacttaatttttttgtatttggttcaatgtttaaaagctcttctgattatgattttt 20976201  T
Q  206 taataaagcttagct 220  Q
    ||||||||| |||||    
T  20976202 taataaagcatagct 20976216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 29156205 - 29156421
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||    
T  29156205 acttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaatcatttctttttcatataaaccattcgttttcccctttcccacaacggata 29156304  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
    ||||||||||||||| || |||||||||||| ||||||||||| ||| ||||       ||||||||||||||||||| ||||||| |||||| ||||||    
T  29156305 agtgacaaattcaaacgataccgttagtaaattctacctctctttcaattaatttttttgtattttgtttcatgtttagaagctctactgattttgattt 29156404  T
Q  204 tttaataaagcttagct 220  Q
    |||||||||| ||||||    
T  29156405 tttaataaagtttagct 29156421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 17513985 - 17513772
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||||||||||||||||| |||||||  | |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||    
T  17513985 acttaatcagtcaatttgaaaagttatttcactgaaagaatcacaacaatcatttctttttcacataaaccattcgtttttccctttcccacaacggata 17513886  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
    |||||||||| |||| ||   |||| ||||| ||||||||||| ||||||||       |||||| |||||||||||| ||||||||||||||||  |||    
T  17513885 agtgacaaatccaaacgaggtcgttggtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttctgattctatttt 17513786  T
Q  204 tttaataaagctta 217  Q
    ||||||||||||||    
T  17513785 tttaataaagctta 17513772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 42291930 - 42291719
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  || |||    
T  42291930 acttaatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatcatttctttttcacataaaccattcgttttcccctttcccaccgcggata 42291831  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaa--nnnnnnngtattttgtttcatgtttaaaagctcttctgattctgat 201  Q
    |||||||||| |||||| || |||| ||||| ||||||||||| ||||||||         |||||| |||||||||||| |||||||||||||||||||    
T  42291830 agtgacaaatccaaatgtcatcgttggtaaattctacctctctttcacttaatttttttttgtatttcgtttcatgtttagaagctcttctgattctgat 42291731  T
Q  202 tttttaataaag 213  Q
    ||||| ||||||    
T  42291730 ttttttataaag 42291719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 5829400 - 5829612
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||  |||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| |||    
T  5829400 acttaatcagtcaattt--aaagctatttcattaaaagaatcacaacaatcatttctttttcacataaaccattcgtttttccctttcctacaacggata 5829497  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
     ||||||||| |||| ||||| ||||||||||||||||||||| ||||||||       ||||||  ||  ||||||| |||||||||||||||||||||    
T  5829498 ggtgacaaatccaaacgacactgttagtaaactctacctctctttcacttaatttttttgtatttcatt--atgtttagaagctcttctgattctgattt 5829595  T
Q  204 tttaataaagcttagct 220  Q
    |||||||||| ||||||    
T  5829596 tttaataaagtttagct 5829612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 10591322 - 10591109
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||||| ||||||||||| |||||||| | |||||||||||||||||||| ||||| ||| ||| |||||||| ||||||||||||||||| |||    
T  10591322 acttaatcagttaatttgaaaagttatttcattgaaagaatcacaacaatcatttatttttcacaaaaatcattcgttatcccctttcccacaacggata 10591223  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
    ||| |  ||| |||| | ||||||||||||| ||||||||||| ||||||||       |||||| |||||||||||| || || |||||||||||||||    
T  10591222 agtaatcaatccaaacggcaccgttagtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaaactattctgattctgattt 10591123  T
Q  204 tttaataaagctta 217  Q
    ||||||||||||||    
T  10591122 tttaataaagctta 10591109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 9 - 206
Target Start/End: Complemental strand, 4734626 - 4734428
Alignment:
Q  9 atcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagtga 108  Q
    |||| |||||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| || ||||||||    
T  4734626 atcactcaatttgaaaatctatttcattgaaagaatcacaacaatcatttctttttcacataaaccattcgttttcccatttcccacagcggataagtga 4734527  T
Q  109 caaattcaaatgacaccgttagtaaactctacctctctgtcacttaa-nnnnnnngtattttgtttcatgtttaaaagctcttctgattctgatttttt 206  Q
    ||||| |||||||||||||||||||| ||||| ||||| ||||||||        |||||| |||||||||||| |||||||| ||||| | |||||||    
T  4734526 caaatccaaatgacaccgttagtaaattctacatctctttcacttaattttttttgtatttcgtttcatgtttagaagctcttttgattttaatttttt 4734428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 7390449 - 7390234
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||||||||||| ||||| |||||||| | ||||||||| ||||| ||||||||||  ||||||||||||||||||||||||||  | ||  | |    
T  7390449 acttaatcagtcaatttaaaaagttatttcatcgaaagaatcacgacaattatttctttttcgcataaaccattcgttttcccctttcctgcgacataga 7390350  T
Q  104 agtgacaaattcaaatgacaccgttag-taaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    ||||||  ||||||| ||||||||||| |||| |  |||||||| ||||||||        | |||||||| ||||||||||| ||||||||||| ||||    
T  7390349 agtgac--attcaaacgacaccgttagataaatttcacctctctttcacttaattttattttgttttgttttatgtttaaaagttcttctgattccgatt 7390252  T
Q  203 ttttaataaagcttagct 220  Q
    ||||||| ||||||||||    
T  7390251 ttttaatgaagcttagct 7390234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 40956328 - 40956454
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||| | |||||||||| |||||||||   ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| | |      
T  40956328 acttaatcatttaatttgaaaaactatttcattaaaagaatcacaacaatcatttcttttttgcatacaccattcgttttcccctttcccacaatggaag 40956427  T
Q  104 agtgacaaattcaaatgacaccgttag 130  Q
    |||||||||| |||| ||| |||||||    
T  40956428 agtgacaaatccaaacgacgccgttag 40956454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 4 - 209
Target Start/End: Original strand, 17325859 - 17326065
Alignment:
Q  4 acttaatcagtcaatttgaaaag-ctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||||||||||||||  ||||||||| | ||||||||||||||| ||||||||||  ||||||||||||| |||||||||||| || ||| |     
T  17325859 acttaatcagtcaatttgaaaaaactatttcattgaaagaatcacaacaattatttctttttcgcataaaccattcgctttcccctttcctacgacgtag 17325958  T
Q  103 aagtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgat 201  Q
     |||||| | | |||| |||||||||| ||||| |  |||| ||| |||||| |        | ||||||||| |||||||||| |||||||||||||||    
T  17325959 gagtgac-attccaaacgacaccgttaggtaaatttcacctatctttcactttattttattttgttttgtttcgtgtttaaaagttcttctgattctgat 17326057  T
Q  202 tttttaat 209  Q
    ||||||||    
T  17326058 tttttaat 17326065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 209
Target Start/End: Original strand, 33281689 - 33281894
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||| ||||||||| ||||| |||||||| | ||||||| ||| ||||||||||||||  ||||||||||| | ||| || |||||||||||| ||     
T  33281689 acttaattagtcaatttaaaaagttatttcattgaaagaatcccaataatcatttctttttcgcataaaccatttgcttttccttttcccacaacggatg 33281788  T
Q  104 agtgacaaattcaaatgacaccgtt-agtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    ||||||||||||||| |||| |||| |||||| |  |||||||| |||||| |        |||||||||||||||||| ||| |||| ||||| ||||     
T  33281789 agtgacaaattcaaacgacatcgttaagtaaatttcacctctctttcactt-atttttttatattttgtttcatgtttagaagttcttttgattatgatc 33281887  T
Q  203 ttttaat 209  Q
    |||||||    
T  33281888 ttttaat 33281894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 13474645 - 13474772
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||||||||||||||| | |||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||  |     
T  13474645 acttaatcagtcaatttgaaaagttgtttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagag 13474744  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  13474745 gagtgacaaatccaaacgacaccgttag 13474772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 13656225 - 13656352
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||||||||||||||| |||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| | |||||  |     
T  13656225 acttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttctacaacagag 13656324  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||| |||||||||| |||||||||||    
T  13656325 gagtgtcaaattcaaacgacaccgttag 13656352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 209
Target Start/End: Original strand, 18873472 - 18873680
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaacc---attcgttttcccctttcccacaacga 100  Q
    |||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||||  ||||||||   |||||||||||||||||| || |||     
T  18873472 acttaatcagccaatttgaaaagctatttcattgaaagaatcacaacaattatttctttttcgcataaaccattattcgttttcccctttcctacgacgt 18873571  T
Q  101 ataagtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctg 199  Q
    |  |||||| | | |||| || ||||||| ||||| |  |||| ||| ||||||||        | |||||||||||||||||||| | ||||||||||     
T  18873572 aggagtgac-attccaaacgaaaccgttaggtaaatttcacctttctttcacttaactttattttgttttgtttcatgtttaaaagtttttctgattcta 18873670  T
Q  200 attttttaat 209  Q
    ||||||||||    
T  18873671 attttttaat 18873680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 138159 - 138246
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttc 91  Q
    |||||||||||||||||||||||||||||||| | || |||||||||||| |||| ||||   |||||||||||||||||||||||||    
T  138159 acttaatcagtcaatttgaaaagctatttcattgaaataatcacaacaattattttttttccgcataaaccattcgttttcccctttc 138246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 19099363 - 19099236
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||||||| ||| ||  |||||||||||||||||  |  || |||||||  |     
T  19099363 acttaatcagtcaatttaaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttatcactttccacaaccgag 19099264  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
    ||||||||||| |||| |||||||||||    
T  19099263 aagtgacaaatccaaacgacaccgttag 19099236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 10033570 - 10033770
Alignment:
Q  12 agtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagtgacaa 111  Q
    ||||||||||||||||||||| || | ||||||||||| ||| ||||||||||  ||||||||||||||||| |||||||| || ||| |  |||||| |    
T  10033570 agtcaatttgaaaagctattttattgaaagaatcacaataattatttctttttcgcataaaccattcgtttt-ccctttcctacgacgtaggagtgac-a 10033667  T
Q  112 attcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngta-----ttttgtttcatgtttaaaagctcttctgattctgattttt 205  Q
     | |||| || ||||||| ||||| |  |||||||| ||||||||        ||     |||||||||||||||||||| |||||||||||||||||||    
T  10033668 ttccaaacgaaaccgttaggtaaatttcacctctctttcacttaattttattttattttgttttgtttcatgtttaaaagttcttctgattctgattttt 10033767  T
Q  206 taa 208  Q
    |||    
T  10033768 taa 10033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 8379453 - 8379282
Alignment:
Q  42 aatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagtgacaaattcaaatgacaccgtt-agtaaactctac 140  Q
    |||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||| || |||||||||| |||| |||||||||  ||||| |  ||    
T  8379453 aatcacaacaataatttctttttcgcataatccattcgttttcccc-ttcccacaacggatgagtgacaaatccaaacgacaccgttgcgtaaatttcac 8379355  T
Q  141 ctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttttaataaagc 214  Q
    |||||| ||||||||        | ||| |||||||||||| ||| ||||||||| || |||||||||| ||||    
T  8379354 ctctctttcacttaatattttt-tttttcgtttcatgtttagaagatcttctgatacttattttttaatgaagc 8379282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 27351364 - 27351580
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||| |||| |||||||| | |||||| ||   ||||||||||||||| ||||||||| || |||||  ||||||||||||| |      
T  27351364 acttaatcagtcaatttggaaagttatttcattgaaagaataacctaaatcatttcttttttgcataaaccagtcattttcttctttcccacaacggagg 27351463  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    ||||||||||  ||| |||||  ||| ||||| |  |||||||| ||||||||        |||||  ||||||||||| ||| |||||||||||  |||    
T  27351464 agtgacaaatctaaacgacactattaggtaaatttcacctctctttcacttaattttttt-tatttcctttcatgtttagaagttcttctgattcgaatt 27351562  T
Q  203 ttttaataaagcttagct 220  Q
    ||||||| ||| ||||||    
T  27351563 ttttaatgaagtttagct 27351580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 12661324 - 12661451
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||| ||||||||||| ||||||||||||| | |||||||||||||||  ||| ||| ||  ||||||||||||||||| |||||| |||||||  |     
T  12661324 acttaaccagtcaatttggaaagctatttcattgaaagaatcacaacaatattttttttcttcgcataaaccattcgttttacccttttccacaacagag 12661423  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| ||||| |||||    
T  12661424 gagtgacaaatccaaacgacactgttag 12661451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 931395 - 931484
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaac 98  Q
    |||||||||||||||||  |||||||||     | ||||||||||| ||||||||||||||  |||||||||||||||||| |||||||||||||    
T  931395 acttaatcagtcaatttagaaagctatt-----gaaagaatcacaataatcatttctttttcgcataaaccattcgttttctcctttcccacaac 931484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 13423879 - 13423973
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaa 97  Q
    ||||||||| |||||||  ||||||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| ||||||    
T  13423879 acttaatcaatcaatttagaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaa 13423973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 26377823 - 26377695
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt--tttacataaaccattcgttttcccctttcccacaacgaa 101  Q
    ||||| ||||||||| ||| |||||||||||| | |||||||||||||||||||| |||  ||  ||||||||||||||||| || |||  ||||||  |    
T  26377823 acttattcagtcaatgtgagaagctatttcattgaaagaatcacaacaatcatttttttccttcgcataaaccattcgttttaccttttttcacaactga 26377724  T
Q  102 taagtgacaaattcaaatgacaccgttag 130  Q
      |||||||||| |||| |||||||||||    
T  26377723 ggagtgacaaatccaaacgacaccgttag 26377695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 4177375 - 4177428
Alignment:
Q  164 tattttgtttcatgtttaaaagctcttctgattctgattttttaataaagctta 217  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||| |||||||    
T  4177375 tattttgtttcatgtttagaagttcttctgattatgattttttaatgaagctta 4177428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 40779209 - 40779298
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttt-acataaaccattcgttttcccctttcccacaa 97  Q
    ||||| |||||||||||||| ||||| ||| | | |||||||||||||||||||||||||   ||||||||||||||||  ||||||||||||    
T  40779209 ttaataagtcaatttgaaaaactattccattg-aggaatcacaacaatcatttcttttttcgtataaaccattcgtttt--cctttcccacaa 40779298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 13288618 - 13288674
Alignment:
Q  164 tattttgtttcatgtttaaaagctcttctgattctgattttttaataaagcttagct 220  Q
    |||||||||||||||||||| | |||||||||| |||||||||||| || |||||||    
T  13288618 tattttgtttcatgtttaaatgttcttctgattatgattttttaatgaaacttagct 13288674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 16515539 - 16515600
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttt 65  Q
    ||||||||| ||||||||||||  ||||| || | ||||||||||||||| |||||||||||    
T  16515539 acttaatcaatcaatttgaaaaattattttattgaaagaatcacaacaattatttctttttt 16515600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 206
Target Start/End: Original strand, 13424046 - 13424081
Alignment:
Q  171 tttcatgtttaaaagctcttctgattctgatttttt 206  Q
    ||||||||||||||| ||||||||||||||||||||    
T  13424046 tttcatgtttaaaagttcttctgattctgatttttt 13424081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 16515682 - 16515736
Alignment:
Q  166 ttttgtttcatgtttaaaagctcttctgattctgattttttaataaagcttagct 220  Q
    ||||||||||||||| |||| |||||| ||||||| ||||| || ||||||||||    
T  16515682 ttttgtttcatgttttaaagttcttctcattctgactttttcatgaagcttagct 16515736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 36718614 - 36718535
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt--tttacataaaccattcgtttt 83  Q
    |||||||||||||||| |||| ||||| || | |||||||||||| || |||| |||  ||  |||||||||||||||||    
T  36718614 ttaatcagtcaatttgtaaagttattttattgaaagaatcacaaccataattttttttcttcgcataaaccattcgtttt 36718535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 1e-73; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 385 - 627
Target Start/End: Complemental strand, 25928662 - 25928403
Alignment:
Q  385 aatcacgagtgttgtgaccgaggggccaaaacattgcatttcgacaagtgtccatatggccccatcagcccaaagatccttaaaaatctagagaaagtcc 484  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  25928662 aatcacgagtgttgtgactgagggaccaaaacattgcatttcgacaagtgtccatatggccccatctgcccaaagatccttaaaaatctagagaaagtca 25928563  T
Q  485 ttgt-----------------aaaatcctattgtgaggtatcggttttcatattacactattgattgnnnnnnnnnnnnnagttgataaatgaagtgata 567  Q
    | ||                 |||||||||||||||||||||| |||||||||||||||||||||||             ||||||||||||||||||||    
T  25928562 tagtaatgttttcaattcagcaaaatcctattgtgaggtatcgattttcatattacactattgattgttttttgttttttagttgataaatgaagtgata 25928463  T
Q  568 tccatcgtattaaattgatacatagaagtgcgaagaactagaattgagttttgatgatgt 627  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25928462 tccatcgtattaaattgatacatagaagtgcgaagaactagaattgagttttgatgatgt 25928403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 48627078 - 48626869
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||| ||||||||||||||||| ||||||||| | |||||||||||||||||||| ||||| |||||||||||||||||| ||| |||||||| || |||    
T  48627078 acttgatcagtcaatttgaaaatctatttcattgaaagaatcacaacaatcatttatttttcacataaaccattcgtttt-cccattcccacagcggata 48626980  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcactta-annnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||||||| |||||||||| ||||||||| ||||||||||| |||||||         |||||| |||||||||||| |||||||||||||||| |||    
T  48626979 agtgacaaatccaaatgacactgttagtaaattctacctctctttcacttatttttttttgtatttcgtttcatgtttagaagctcttctgattctaatt 48626880  T
Q  203 ttttaataaag 213  Q
    |||| ||||||    
T  48626879 tttttataaag 48626869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 43905861 - 43905689
Alignment:
Q  45 cacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagtgacaaattcaaatgacaccgttagtaaactctacctct 144  Q
    |||||||||||||||||||| ||||||||||||| |||| |||||||||||| || ||||||||||||| |||||||||||||||||||| |||||||||    
T  43905861 cacaacaatcatttctttttcacataaaccattcatttttccctttcccacagcggataagtgacaaatccaaatgacaccgttagtaaattctacctct 43905762  T
Q  145 ctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttttaataaagctta 217  Q
    || ||||||||       |||||| |||||||||||| |||||||| |||||||  ||||||| |||||||||    
T  43905761 ctttcacttaatttttttgtatttcgtttcatgtttagaagctcttatgattctatttttttagtaaagctta 43905689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 27303202 - 27303413
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||||  ||||||| ||| ||||| |||||||| || ||| |      
T  27303202 acttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaattatttctttttcgcataaactatttgtttt-ccctttcctacgacgtagg 27303300  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    ||||||  ||||||| |||||| ||| ||||| |  |||||||| ||||||||        | |||||||||||||||||||| ||||||||||||||||    
T  27303301 agtgac--attcaaacgacaccattaggtaaatttcacctctctttcacttaattttattttgttttgtttcatgtttaaaagttcttctgattctgatt 27303398  T
Q  203 ttttaataaagctta 217  Q
    ||||||| |||||||    
T  27303399 ttttaatgaagctta 27303413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 7767078 - 7767297
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt---tttacataaaccattcgttttcccctttcccacaacga 100  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |||   || |||||||| |||||||||||| ||||| |  |||     
T  7767078 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaattatttttttttcttcacataaactattcgttttcccatttcctaagacgt 7767177  T
Q  101 ataagtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctg 199  Q
    |  |||||| | | |||||||||| |||| ||||| |  || ||||| ||||||||        |||||||||||||||||||||| |||||||||||||    
T  7767178 aggagtgac-attccaaatgacacagttaggtaaatttcacatctctttcacttaattttattttattttgtttcatgtttaaaagttcttctgattctg 7767276  T
Q  200 attttttaataaagcttagct 220  Q
    | |||||||| ||||||||||    
T  7767277 actttttaatgaagcttagct 7767297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 46904757 - 46904969
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||||||||||| |||| ||||||||| | ||||||||||||||| ||||||||||| |||||||| ||  |||| |||||||| || ||| |      
T  46904757 acttaatcagtcaatttaaaaaactatttcattgaaagaatcacaacaattatttcttttttgcataaaccttttatttttccctttcctacgacgtagg 46904856  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| | | |||| |||||||||| ||||| |  |||||||| ||||||||        | |||||||||||||||||||| |||||| |||||||||    
T  46904857 agtgac-attccaaacgacaccgttaggtaaatttcacctctctttcacttaattttattttgttttgtttcatgtttaaaagttcttcttattctgatt 46904955  T
Q  203 ttttaataaagctt 216  Q
    ||||||| ||||||    
T  46904956 ttttaatgaagctt 46904969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 51939605 - 51939483
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt--tttacataaaccattcgttttcccctttcccacaacgaa 101  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||  || |||||||||||||||||| |||||| |||||||  |    
T  51939605 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttcttcacataaaccattcgttttacccttttccacaacata 51939506  T
Q  102 taagtgacaaattcaaatgacac 124  Q
     ||||||||||| |||| |||||    
T  51939505 gaagtgacaaatccaaacgacac 51939483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 25599135 - 25599009
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||||||| | || ||  ||||||||||||||||| |||||| |||||||  |      
T  25599135 acttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatcatgttttcttcgcataaaccattcgttttacccttttccacaacagagg 25599036  T
Q  104 agtgacaaattcaaatgacaccgttag 130  Q
    ||||||||||||||| |||||||||||    
T  25599035 agtgacaaattcaaacgacaccgttag 25599009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 36538235 - 36538147
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcc 92  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  36538235 acttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaattatttctttttcgcataaaccattcgttttcccctttcc 36538147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 42009311 - 42009223
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcc 92  Q
    ||||||||||||||||| ||||| |||||||| | ||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  42009311 acttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaattatttctttttcacataaaccattcgttttcccctttcc 42009223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 13401474 - 13401599
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttt--tacataaaccattcgttttcccctttcccacaacgaa 101  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    ||||||||||| ||||| |||||| |||||||  |    
T  13401474 acttaatcagtcaatttgaaaagctatttcattggaagaatcacaacaatcatttttttttcccgcataaaccatttgttttacccttttccacaacaga 13401573  T
Q  102 taagtgacaaattcaaatgacaccgt 127  Q
      |||| |||||||||| ||||||||    
T  13401574 ggagtgccaaattcaaacgacaccgt 13401599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 15987215 - 15987338
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||| |||||||  |||| ||||||||   |||||| ||||| ||||||| |||||  ||||||||||||||||| ||||||||||||||| |      
T  15987215 acttaatcattcaatttcgaaagttatttcattaaaagaattacaactatcatttatttttcgcataaaccattcgtttttccctttcccacaacggagg 15987314  T
Q  104 agtgacaaattcaaatgacaccgt 127  Q
    ||||||||||||||||||||||||    
T  15987315 agtgacaaattcaaatgacaccgt 15987338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 52655172 - 52655045
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||||||||| |||  |  ||||||||||||||||| |||||| |||||||  |     
T  52655172 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcctcgcataaaccattcgttttacccttttccacaacatag 52655073  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     ||||||||||||||| || ||||||||    
T  52655072 gagtgacaaattcaaacgataccgttag 52655045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 28132784 - 28132658
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||||||||| || ||  ||||||||||||||||| || ||| |||||||  |      
T  28132784 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttcttcgcataaaccattcgttttaccattttccacaacagagg 28132685  T
Q  104 agtgacaaattcaaatgacaccgttag 130  Q
    |||||||| |||||| ||| |||||||    
T  28132684 agtgacaagttcaaacgacgccgttag 28132658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 18408206 - 18408331
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttt-acataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||||||||||| | ||| | |||||||||||||||||||| ||||||  ||||||| ||||||||| |||||| |||||||  |     
T  18408206 acttaatcagtcaatttgaaaagctaatccattgaaagaatcacaacaatcattttttttttcgcataaacaattcgttttacccttttccacaacagag 18408305  T
Q  103 aagtgacaaattcaaatgacaccgtt 128  Q
     |||||||||| |||| |||||||||    
T  18408306 cagtgacaaatccaaacgacaccgtt 18408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 50677363 - 50677275
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcc 92  Q
    |||||||||||||||||||||| ||||||||| | || |||||||||||| ||||||||||  ||||||| ||||||||||||||||||    
T  50677363 acttaatcagtcaatttgaaaaactatttcattgaaacaatcacaacaattatttctttttcgcataaacaattcgttttcccctttcc 50677275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 24252635 - 24252762
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| |||| |||||||  | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||  ||    
T  24252635 acttaatcagtcaatttggaaagttatttcagtgcaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagat 24252734  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| ||| |||||||    
T  24252735 gagtgacaaatccaaacgaccccgttag 24252762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 21784833 - 21784705
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt--tttacataaaccattcgttttcccctttcccacaacgaa 101  Q
    ||||||||||| |||||| ||||||||||||| | |||||||||||||||||||| |||  ||  ||||||||||||||||| |||||| |||||||  |    
T  21784833 acttaatcagttaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgttttacccttttccacaacaga 21784734  T
Q  102 taagtgacaaattcaaatgacaccgttag 130  Q
      |||||||||| |||| ||| |||||||    
T  21784733 ggagtgacaaatccaaacgacgccgttag 21784705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 41707104 - 41707043
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttt 65  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||    
T  41707104 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttttt 41707043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 29387803 - 29387716
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttccccttt 90  Q
    ||||||||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| ||||||    
T  29387803 acttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttt 29387716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 46791746 - 46791619
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| ||| ||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||  ||  |||||| |||||||  |     
T  46791746 acttaatcagtcaatttggaaaactatttcattgcaagaatcacaacaatcatttttttcttcgcataaaccattcacttgacccttttccacaacagag 46791647  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  46791646 gagtgacaaatccaaacgacaccgttag 46791619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 54430567 - 54430682
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||||||||||||||| ||||||||   ||||||  |||||||||||| ||| ||  ||||||||||||||||| |||||| ||||||| ||     
T  54430567 acttaatcagtcaatttgaaaagttatttcattaaaagaattgcaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacaaac 54430666  T
Q  103 aagtgacaaattcaaa 118  Q
     |||||||||| ||||    
T  54430667 gagtgacaaatccaaa 54430682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 8364187 - 8364315
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt--tttacataaaccattcgttttcccctttcccacaacgaa 101  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||||| |||  ||  || |||||||| ||||| |||||| |||||||  |    
T  8364187 acttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcattttttttcttcgcacaaaccatttgttttacccttttccacaacaga 8364286  T
Q  102 taagtgacaaattcaaatgacaccgttag 130  Q
      || ||||||| |||| |||||||||||    
T  8364287 ggagagacaaatccaaacgacaccgttag 8364315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 21596350 - 21596438
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcc 92  Q
    |||||||||||| ||||| |||||||||||||   |||||||||||||||||||| |||||| |  |||||||| ||||| ||||||||    
T  21596350 acttaatcagtcgatttggaaagctatttcattacaagaatcacaacaatcatttattttttgctcaaaccatttgtttttccctttcc 21596438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 40152179 - 40152084
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaa-gaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacg 99  Q
    |||||||| ||||||||||||| |||||||||   || |||||||||||||||||||||||   ||||||||||| | |||||||||||||||||||    
T  40152179 acttaatcggtcaatttgaaaaactatttcattaaaacgaatcacaacaatcatttcttttgcgcataaaccatttg-tttcccctttcccacaacg 40152084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 6715457 - 6715540
Alignment:
Q  7 taatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttccccttt 90  Q
    ||||||||||||||  |||| |||||||| | |||||||| ||||||||||| |||||  ||||||||||||||||| ||||||    
T  6715457 taatcagtcaattttgaaagttatttcattgaaagaatcataacaatcatttttttttcgcataaaccattcgttttacccttt 6715540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1255102 - 1255007
Alignment:
Q  1 atgacttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaac 98  Q
    ||||||||||| ||||||||  |||| |||||||| | ||||||||  ||||| |||| |||||  ||||||||||||||||||||||||||| ||||    
T  1255102 atgacttaatcggtcaatttagaaagttatttcattgaaagaatca--acaataatttgtttttcgcataaaccattcgttttcccctttcccgcaac 1255007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 19965929 - 19965812
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaa-caatcatttcttttttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||| ||| || |||||||||||||||||   ||||||||||| ||||||||| |||    |||||||||||||||||| |||||||||||||| ||    
T  19965929 acttaattagttaaattgaaaagctatttcattaaaagaatcacaaacaatcattt-tttcccgcataaaccattcgttttctcctttcccacaacggat 19965831  T
Q  103 aagtgacaaattcaaatga 121  Q
     | ||| ||||||||||||    
T  19965830 gaatgagaaattcaaatga 19965812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 23164621 - 23164496
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||| |||||||| ||  ||||||||| | ||||||||||||||| |||| ||| ||  ||||||||||||||||| || ||| |||||||  |     
T  23164621 acttaatcaatcaatttggaagtctatttcattgaaagaatcacaacaataatttttttcttcgcataaaccattcgttttacctttttccacaacagag 23164522  T
Q  103 aagtgacaaattcaaatgacaccgtt 128  Q
     |||||||||| |||| |||||||||    
T  23164521 gagtgacaaatccaaacgacaccgtt 23164496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 27729815 - 27729691
Alignment:
Q  7 taatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttta-cataaaccattcgttttcccctttcccacaacgaataag 105  Q
    |||||| |||||||| ||||| |||| || | |||||||||||||||||||  ||| ||  ||||||||||||||||| ||||||  ||||||  | |||    
T  27729815 taatcaatcaatttggaaagcaatttgatcgaaagaatcacaacaatcattattttcttcgcataaaccattcgttttaccctttttcacaacatagaag 27729716  T
Q  106 tgacaaattcaaatgacaccgttag 130  Q
    |||||||| |||| ||||| |||||    
T  27729715 tgacaaatccaaacgacactgttag 27729691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 51146952 - 51147165
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctt-ttttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||||||||| |||| |||||| || | ||||||||||||||| |||| || | |  ||||||||||||||||| |||||| | || ||  |     
T  51146952 acttaatcagtcaatttaaaaaactattttattgaaagaatcacaacaattattttttctctcgcataaaccattcgtttt-cccttttctacgacatag 51147050  T
Q  103 aagtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgat 201  Q
    ||||||| | | |||| |||||||||| ||||| | || |||||| |||||| |        | ||||||||| ||||||| || |||||||||| ||||    
T  51147051 aagtgac-attccaaacgacaccgttaggtaaattttatctctctttcacttcattttattttgttttgtttcgtgtttaagagttcttctgattatgat 51147149  T
Q  202 tttttaataaagctta 217  Q
    |||||||| |||||||    
T  51147150 tttttaatgaagctta 51147165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 23067767 - 23067646
Alignment:
Q  11 cagtcaatttgaaaagctatttcataggaagaatcaca-acaatcatttctttttta-cataaaccattcgttttcccctttcccacaacgaataagtga 108  Q
    |||||||||||||||| ||||||||   |||||||||| |||||||||| ||  ||  ||||||||||| ||||| |||||| |||||||  |  |||||    
T  23067767 cagtcaatttgaaaagttatttcatttaaagaatcacacacaatcattttttaattcgcataaaccatttgttttacccttttccacaacagaggagtga 23067668  T
Q  109 caaattcaaatgacaccgttag 130  Q
     |||| ||||||||||||||||    
T  23067667 aaaatccaaatgacaccgttag 23067646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 27110857 - 27110794
Alignment:
Q  67 cataaaccattcgttttcccctttcccacaacgaataagtgacaaattcaaatgacaccgttag 130  Q
    ||||||||||||||||| |||||| |||||||  |  ||||||||||||||| |||||||||||    
T  27110857 cataaaccattcgttttacccttttccacaacagaggagtgacaaattcaaacgacaccgttag 27110794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 1649880 - 1649798
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttccc 86  Q
    ||||||||| |||||||||||| ||||||||  | |||  || ||||||||| ||||||||| ||||| ||||| ||||||||    
T  1649880 acttaatcattcaatttgaaaatctatttcactgaaagcttcgcaacaatcaattcttttttgcataagccatttgttttccc 1649798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 21596516 - 21596565
Alignment:
Q  171 tttcatgtttaaaagctcttctgattctgattttttaataaagcttagct 220  Q
    ||||||||||| ||| |||| |||||||||||||||||| ||||||||||    
T  21596516 tttcatgtttagaagttcttttgattctgattttttaatgaagcttagct 21596565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 20762064 - 20762158
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaa 97  Q
    |||| |||||| |||||| ||  ||||||||| | |||||||| ||||||||||| |||  |  ||||||||||||||||| |||||| ||||||    
T  20762064 acttgatcagttaatttggaagtctatttcattgaaagaatcataacaatcatttttttcgtcgcataaaccattcgttttacccttttccacaa 20762158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 329
Target Start/End: Complemental strand, 25930751 - 25930692
Alignment:
Q  266 agagaggattagaatgatgaggtgaccatcaaaatcatatcatatagtacaaaatatatacaag 329  Q
    |||||||||||||||||||||||||| ||||||  |||||     |||||||||||||||||||    
T  25930751 agagaggattagaatgatgaggtgactatcaaatccatat----aagtacaaaatatatacaag 25930692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 40152019 - 40151966
Alignment:
Q  164 tattttgtttcatgtttaaaagctcttctgattctgattttttaataaagctta 217  Q
    ||||| ||||||| |||||||| | || |||||||||||||||||| |||||||    
T  40152019 tatttcgtttcatatttaaaagtttttatgattctgattttttaatgaagctta 40151966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 4207403 - 4207346
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttt 65  Q
    ||||||||| |||||||| |||| |||||||    |||||||||||||||| ||||||||||    
T  4207403 acttaatcattcaatttggaaagatatttca----aagaatcacaacaatcctttctttttt 4207346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 5e-70; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 1093092 - 1092874
Alignment:
Q  1 atgacttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacga 100  Q
    |||||| ||||||||||||| |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     
T  1093092 atgactaaatcagtcaatttaaaaagctatttcat-gaaagaatcacaacaatcatttctttttcacataaaccattcgttttcccctttcccaaaacgg 1092994  T
Q  101 ataagtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctga 200  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||       |||||| |||||||||||| |||||||| ||||||| |    
T  1092993 ataagtgacaaatccaaatgacaccgttagtaaattctacatctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttttgattctaa 1092894  T
Q  201 ttttttaataaagcttagct 220  Q
    ||||||||||||||||||||    
T  1092893 ttttttaataaagcttagct 1092874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 29308519 - 29308303
Alignment:
Q  1 atgacttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacga 100  Q
    ||||||||||||||||||||||||| ||||||||| | |  ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |     
T  29308519 atgacttaatcagtcaatttgaaaaactatttcattgaagtaatcacaacaatcatttctttttcacataaatcattcgttttcccctttcccacaatgg 29308420  T
Q  101 ataagtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctga 200  Q
    |||||||| ||||  ||||||||||||||||||| ||||||||||| ||||||||       |||||| |||||||||||| |||||||| |||||||||    
T  29308419 ataagtgataaatctaaatgacaccgttagtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttatgattctga 29308320  T
Q  201 ttttttaataaagctta 217  Q
    |||||||||||||||||    
T  29308319 ttttttaataaagctta 29308303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 30915415 - 30915197
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttc-----ttttttacataaaccattcgttttcccctttcccacaac 98  Q
    ||||||||||||||||||||||||||||| || | |||||||||||||||||||||     |||||  |||||||||||| || |||||||||  || ||    
T  30915415 acttaatcagtcaatttgaaaagctatttaattgaaagaatcacaacaatcatttctttaatttttcgcataaaccattcattatcccctttcttacgac 30915316  T
Q  99 gaataagtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattc 197  Q
    | | ||||||| | |||||| |||||||||| ||||| | || |||||| ||||||||        |||||||||||||||||| ||| |||||||||||    
T  30915315 gtagaagtgac-atttcaaacgacaccgttatgtaaattttatctctctttcacttaattttattttattttgtttcatgtttataagttcttctgattc 30915217  T
Q  198 tgattttttaataaagctta 217  Q
    |||||||||||| |||||||    
T  30915216 tgattttttaatgaagctta 30915197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 6294279 - 6294487
Alignment:
Q  14 tcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagtgacaaat 113  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||| ||| |  |||||| | |    
T  6294279 tcaatttgaaaagcaatttcattgaaagaatcacaacaatcatttctttttcgcataaactattcgttttcccctttcccacgacgtaggagtgac-att 6294377  T
Q  114 tcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctga--ttttttaata 210  Q
     |||| |||||||||| ||||| |  |||||||| |||| |||        |||||||||||||||||| ||| |||| |||||||||  |||||||||     
T  6294378 ccaaacgacaccgttaggtaaatttcacctctctttcacataattttattttattttgtttcatgtttagaagttcttttgattctgattttttttaatg 6294477  T
Q  211 aagcttagct 220  Q
    ||||||||||    
T  6294478 aagcttagct 6294487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 6754221 - 6754346
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||  |     
T  6754221 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagag 6754320  T
Q  103 aagtgacaaattcaaatgacaccgtt 128  Q
     |||||||||| ||||||||||||||    
T  6754321 gagtgacaaatccaaatgacaccgtt 6754346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 3748617 - 3748401
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||| |||||||| | |||||||| |||||||||||||||||   | ||| |      
T  3748617 acttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaattatttctttgtcacataaactattcgttttcccctttcatgcgacgtagg 3748518  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| | | ||||||||||||||| ||||| |  || ||||| ||||||||        | |||| |||||| |||||||| |||||||||| ||| |    
T  3748517 agtgac-attccaaatgacaccgttaggtaaatttcacatctctttcacttaattttattttgttttatttcatatttaaaagttcttctgattttgact 3748419  T
Q  203 ttttaataaagcttagct 220  Q
    ||||||| ||||||||||    
T  3748418 ttttaatgaagcttagct 3748401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 31861016 - 31861214
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||               ||||||||||||| ||||||||||||||| |||    
T  31861016 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatca---------------aaccattcgtttttccctttcccacaacggata 31861100  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattct-gatt 202  Q
    |||||||||||||||  ||  |||||||||| |||| |||||| ||||||||       |||||| |||| ||||||| |||||||||| |||||   ||    
T  31861101 agtgacaaattcaaacaacgtcgttagtaaattctatctctctttcacttaa-ttttttgtatttcgttttatgtttagaagctcttctaattctatttt 31861199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 2618370 - 2618495
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||| |||| ||| ||  ||||||||||||||||| |||||| |||||||  |     
T  2618370 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaattatttttttcttcgcataaaccattcgttttacccttttccacaacagag 2618469  T
Q  103 aagtgacaaattcaaatgacaccgtt 128  Q
     |||||||||| |||| |||||||||    
T  2618470 gagtgacaaatccaaacgacaccgtt 2618495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 628144 - 628018
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||  |     
T  628144 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtttt-cccttttccacaacagag 628046  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
    |||||| |||| |||| |||| ||||||    
T  628045 aagtgataaatccaaacgacatcgttag 628018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 11088564 - 11088655
Alignment:
Q  7 taatcagtcaatttgaaaagctatttca-taggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaac 98  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||||    
T  11088564 taatcagtcaatttgaaaagctatttcaataaaaagaatcacaacaatcatttcttttttgcataaaccatttg-tttcccctttaccacaac 11088655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 6360775 - 6360901
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttac-ataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||||||||||||||| |||| ||| | |||||||||||||||||||| ||| ||   |||||||||||||||| |||||| |||||||  |     
T  6360775 acttaatcagtcaatttgaaaagttatt-cattgaaagaatcacaacaatcatttttttcttcgtataaaccattcgttttacccttttccacaacagag 6360873  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     ||||||||||||||| |||||||||||    
T  6360874 gagtgacaaattcaaacgacaccgttag 6360901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 12614765 - 12614670
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaac 98  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| ||  |||||||||| |||||| |||||| |||||||    
T  12614765 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccatccgttttacccttttccacaac 12614670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 21946122 - 21946317
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||| ||||||||||||||||||| | ||||| || |||||| ||||||||||  ||||||| ||||||||||| |||||| || ||| |      
T  21946122 acttaatcagtctatttgaaaagctatttcattgaaagaaccataacaattatttctttttcgcataaacaattcgttttcctctttcctac-acgtaag 21946220  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    ||||||  ||||||| |||||||||| ||||| || |||||||| ||||||||        | ||||||||||| |||||||| | ||||||||||||||    
T  21946221 agtgac--attcaaacgacaccgttaggtaaattccacctctctttcacttaatttattt-tgttttgtttcatatttaaaagttattctgattctgatt 21946317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 22503758 - 22503885
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttac-ataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||||||| ||||||| | | |||||| | ||||||||||| ||| ||   ||||||||||| |||| |||||| |||||||  |     
T  22503758 acttaatcagtcaatttgaaaaactatttcgttgaaagaattaaaacaatcatttttttcttcgtataaaccattcattttacccttttccacaacagag 22503857  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
    ||||||||||||||||||||||||||||    
T  22503858 aagtgacaaattcaaatgacaccgttag 22503885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 29401155 - 29401277
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||||||||||||||| |||||||| | |||||||||||||||||||| ||| ||  |||||||||||||| || |||||| |||| ||  |     
T  29401155 acttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgtcttacccttttccacgacagag 29401254  T
Q  103 aagtgacaaattcaaatgacacc 125  Q
     |||||||||| |||||||||||    
T  29401255 gagtgacaaatccaaatgacacc 29401277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 57703 - 57830
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||  |||||||||||||   |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| ||||||   |     
T  57703 acttaatcagtcaatttagaaagctatttcattcaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaatagag 57802  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  57803 gagtgacaaatccaaacgacaccgttag 57830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 129
Target Start/End: Original strand, 29149418 - 29149544
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| |||| || ||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||  |     
T  29149418 acttaatcagtcaatttggaaagttagttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagag 29149517  T
Q  103 aagtgacaaattcaaatgacaccgtta 129  Q
     |||||||||| |||| || |||||||    
T  29149518 gagtgacaaatccaaacgataccgtta 29149544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 3514896 - 3514804
Alignment:
Q  7 taatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaac 98  Q
    |||||| |||||||| |||||||| |||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||    
T  3514896 taatcattcaatttggaaagctatatcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaac 3514804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 7525215 - 7525089
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| |||| ||||| || | |||||||||||||||||||| ||| ||  ||||||| |||  |||| |||||| |||||||  |     
T  7525215 acttaatcagtcaatttggaaagttattttattgaaagaatcacaacaatcatttttttcttcgcataaacaatttattttacccttttccacaacagag 7525116  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  7525115 gagtgacaaatccaaa-gacaccgttag 7525089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 19231627 - 19231741
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||| |||||||||||||||||  ||| | || |||||||||||||||||||||||   |||||| |||| |||||   |||||||||| | | |    
T  19231627 acttaatcaatcaatttgaaaagctatgacattgaaaaaatcacaacaatcatttctttttcgtataaactattctttttcaattttcccacaatggaga 19231726  T
Q  104 agtgacaaattcaaa 118  Q
    ||||| |||| ||||    
T  19231727 agtgataaatccaaa 19231741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 1690607 - 1690550
Alignment:
Q  163 gtattttgtttcatgtttaaaagctcttctgattctgattttttaataaagcttagct 220  Q
    |||||| |||||||||||| ||||| |||||||||||||||||| |||||| ||||||    
T  1690607 gtatttcgtttcatgtttagaagcttttctgattctgatttttttataaagtttagct 1690550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 350433 - 350524
Alignment:
Q  8 aatcagtcaatttgaaaagctatttca-taggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacg 99  Q
    |||||||||||||  |||||||||||| ||  ||||||||||||||||||||||||||  ||||||| ||| | |||||| ||||||| ||||    
T  350433 aatcagtcaatttcgaaagctatttcaataaaaagaatcacaacaatcatttctttttcgcataaacaatttg-tttcccttttcccataacg 350524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 1690682 - 1690622
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttt 64  Q
    |||| |||| ||||||||||||  |||||||| | ||||||||||||||||||||||||||    
T  1690682 acttgatcaatcaatttgaaaatttatttcattgaaagaatcacaacaatcatttcttttt 1690622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 14893466 - 14893412
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcattt 58  Q
    |||||||||||||||||||||| ||||||| |   ||||||||||||||||||||    
T  14893466 acttaatcagtcaatttgaaaaactatttcgttaaaagaatcacaacaatcattt 14893412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 11088746 - 11088802
Alignment:
Q  164 tattttgtttcatgtttaaaagctcttctgattctgattttttaataaagcttagct 220  Q
    ||||| |||||||||||| ||| |||||| |||||||||||||||| ||| ||||||    
T  11088746 tatttcgtttcatgtttagaagttcttctaattctgattttttaatgaagtttagct 11088802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 3514733 - 3514698
Alignment:
Q  171 tttcatgtttaaaagctcttctgattctgatttttt 206  Q
    ||||||||||||||| ||||||||||||||||||||    
T  3514733 tttcatgtttaaaagttcttctgattctgatttttt 3514698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 3e-68; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 55134220 - 55134440
Alignment:
Q  1 atgacttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttc-ttttttacataaaccattcgttttcccctttcccacaacg 99  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||    
T  55134220 atgacttaatcagtcaatttgaaaagctatttcatagaaagaatcacaacaatcatttctttttttacataaatcattcgttttcccttttcccgcaacg 55134319  T
Q  100 aataagtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctg 199  Q
     |||||| | |||| |||||||||| ||||||||| ||||||||||| ||||||||       |||||| |||||||||||| |||||||| |||| |||    
T  55134320 gataagtaataaatccaaatgacactgttagtaaattctacctctctttcacttaatttttttgtatttcgtttcatgtttagaagctcttttgatcctg 55134419  T
Q  200 attttttaataaagcttagct 220  Q
    |||||||||||||||||||||    
T  55134420 attttttaataaagcttagct 55134440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 4 - 197
Target Start/End: Complemental strand, 45172694 - 45172502
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||| |||    
T  45172694 acttaatcagtcaatttgaaaagctatttcatggaaagaatcacaacaatcatttctttttcatatagaccattcgttttcccctttcccacaacggata 45172595  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattc 197  Q
    |||||||||| |||||||||||||||||||| ||||||||||| |||||| |       |||||| |||||||||||| ||||||| |||||||    
T  45172594 agtgacaaatccaaatgacaccgttagtaaattctacctctctttcactt-atttttttgtatttcgtttcatgtttagaagctctgctgattc 45172502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 34982239 - 34982452
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||| ||||| ||||||| | | ||||||||||||||| |||||||||| | ||||| |||| ||||||||||||||||||||  |||    
T  34982239 acttaatcagtcaattggaaaaactatttcgttgaaagaatcacaacaattatttctttttcatataaatcatttgttttcccctttcccacaacagata 34982338  T
Q  104 agtgacaaat-tcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    | |||||||| ||||| ||| ||||||||||| ||||||||||| | ||||||       |||||| |||| ||||||| ||  |||||||||||||| |    
T  34982339 aatgacaaatctcaaacgaccccgttagtaaattctacctctcttttacttaatttttttgtatttcgttttatgtttagaatttcttctgattctga-t 34982437  T
Q  203 ttttaataaagctta 217  Q
    |||||||||||||||    
T  34982438 ttttaataaagctta 34982452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 35654029 - 35653816
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||||  ||||||| ||||||||| |||||||| || ||| |      
T  35654029 acttaatcaatcaatttgaaaagctatttcattgaaagaatcacaacaattatttctttttcgcataaactattcgtttttccctttcctacgacgtagg 35653930  T
Q  104 agtgacaaattcaaatgacaccgttag-taaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| | |||||||||||||||||| |||| |  |||||||| ||||||||        | |||||||||||||||||||| ||||||||||| || |    
T  35653929 agtgac-atttcaaatgacaccgttagataaatttcacctctctttcacttaattttattttgttttgtttcatgtttaaaagttcttctgattcggact 35653831  T
Q  203 ttttaataaagctta 217  Q
    ||||||| |||||||    
T  35653830 ttttaatgaagctta 35653816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 5545344 - 5545470
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||| ||||||||| |||||||||||||   |||||||||||||||||||| |||||  ||||||||||||||||||||| ||| ||||||| |      
T  5545344 acttaatcggtcaatttggaaagctatttcattaaaagaatcacaacaatcatttatttttcgcataaaccattcgttttcccccttctcacaacggagg 5545443  T
Q  104 agtgacaaattcaaatgacaccgttag 130  Q
    ||||||||||||||| |||||||||||    
T  5545444 agtgacaaattcaaacgacaccgttag 5545470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 21791596 - 21791490
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||  ||||||||||| | ||||||||||||||| ||||||     
T  21791596 acttaatcagtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttctttttcgcataaaccatttg-tttcccctttcccacgacgaatg 21791498  T
Q  104 agtgacaa 111  Q
    ||||||||    
T  21791497 agtgacaa 21791490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 19661394 - 19661521
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| ||||||||||||| | ||||| |||||||||| ||| ||| ||| ||||||||||||||||| |||||| ||||||| ||     
T  19661394 acttaatcagtcaatttggaaagctatttcattgaaagaaacacaacaatcctttttttctttgcataaaccattcgttttacccttttccacaacaaag 19661493  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  19661494 gagtgacaaatccaaacgacaccgttag 19661521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 32130839 - 32130718
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||  |     
T  32130839 acttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagag 32130740  T
Q  103 aagtgacaaattcaaatgacac 124  Q
     ||||||||||||||| |||||    
T  32130739 gagtgacaaattcaaacgacac 32130718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 10575572 - 10575481
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccac 95  Q
    |||||||||||||||||  |||| |||||||| | || |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  10575572 acttaatcagtcaatttagaaagttatttcattgaaataatcacaacaatcatttctttttcgcataaaccattcgttttcccctttcccac 10575481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 41038265 - 41038392
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| ||| ||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||  |     
T  41038265 acttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagag 41038364  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  41038365 gagtgacaaatccaaacgacaccgttag 41038392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 126
Target Start/End: Original strand, 23256609 - 23256731
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||  ||||||||||||  | |||||||||||||||||||| || ||  ||||||||||||||||| |||||| |||||||  |      
T  23256609 acttaatcagtcaatttagaaagctatttcaatgaaagaatcacaacaatcattttttcttcccataaaccattcgttttacccttttccacaacagagg 23256708  T
Q  104 agtgacaaattcaaatgacaccg 126  Q
    ||||||||||||||| |||||||    
T  23256709 agtgacaaattcaaacgacaccg 23256731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 44478058 - 44478182
Alignment:
Q  8 aatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt--tttacataaaccattcgttttcccctttcccacaacgaataag 105  Q
    |||||||||||||| ||||||||||||| | |||||||||||||||||||| |||  ||  ||||||| ||||||||| |||||| |||||||  |  ||    
T  44478058 aatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcattttttttcttcgcataaactattcgttttacccttttccacaacagaggag 44478157  T
Q  106 tgacaaattcaaatgacaccgttag 130  Q
    ||||||||||||| |||||||||||    
T  44478158 tgacaaattcaaacgacaccgttag 44478182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 23426215 - 23426120
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaac 98  Q
    |||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||    
T  23426215 acttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaac 23426120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 28463637 - 28463510
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||| |||| ||||||||||||||||| | || ||||||||||||||||| ||| ||  ||||||||||||||||| |||||| ||||||   |     
T  28463637 acttaatcaatcaagttgaaaagctatttcattgaaaaaatcacaacaatcatttttttcttcgcataaaccattcgttttgcccttttccacaatagag 28463538  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     ||||||||||||||| |||||||||||    
T  28463537 gagtgacaaattcaaacgacaccgttag 28463510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 53011727 - 53011854
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| |||||||||||||   |||||||||||||||||||| ||| ||  |||||||||||| |||| |||||| |||||||  |     
T  53011727 acttaatcagtcaatttggaaagctatttcattaaaagaatcacaacaatcatttttttcttcgcataaaccattcattttacccttttccacaacagag 53011826  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  53011827 gagtgacaaatccaaacgacaccgttag 53011854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 11681791 - 11681664
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||||| ||| ||   ||||||||| |||||| |||||| |||||||  ||    
T  11681791 acttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccatccgttttacccttttccacaacagat 11681692  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| ||||  ||||||||||    
T  11681691 gagtgacaaatccaaacaacaccgttag 11681664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 11690070 - 11689943
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||||| ||| ||   ||||||||| |||||| |||||| |||||||  ||    
T  11690070 acttaatcagtcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgaataaaccatccgttttacccttttccacaacagat 11689971  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| ||||  ||||||||||    
T  11689970 gagtgacaaatccaaacaacaccgttag 11689943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 24449222 - 24449328
Alignment:
Q  113 ttcaaatgacaccgttag-taaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttttaataa 211  Q
    ||||||||||| |||||| ||||||| |||||||  ||||||||        |||||||||||||||||||||| ||||||||||||||||||||||| |    
T  24449222 ttcaaatgacatcgttaggtaaactccacctctcgttcacttaattttattttattttgtttcatgtttaaaagttcttctgattctgattttttaatga 24449321  T
Q  212 agcttag 218  Q
    |||||||    
T  24449322 agcttag 24449328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 29579897 - 29580022
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaataa 104  Q
    |||||||||||| ||||||||||||||||  | |||||||||||||||||||| ||| ||  ||||||| ||||||||| || ||| |||||||  |  |    
T  29579897 ttaatcagtcaaattgaaaagctatttcaatgaaagaatcacaacaatcatttttttcttcgcataaacaattcgttttaccattttccacaacagagta 29579996  T
Q  105 gtgacaaattcaaatgacaccgttag 130  Q
    ||||||||| ||||||| ||||||||    
T  29579997 gtgacaaatccaaatgataccgttag 29580022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 27632413 - 27632540
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||| |||||||||||||||||| ||||| | |||||||||| ||||||||| ||| ||  |||||| |||||| ||| |||||| |||||||  |     
T  27632413 acttaattagtcaatttgaaaagctacttcattgaaagaatcacatcaatcatttttttcttcgcataaatcattcgctttacccttttccacaacagag 27632512  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| ||||  ||||||||||    
T  27632513 tagtgacaaatccaaacaacaccgttag 27632540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 43154837 - 43154754
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccc 87  Q
    ||||||||||||||||| ||||| ||||||||   ||||||||||||||| |||| |||||  |||||| ||||||||||||||    
T  43154837 acttaatcagtcaatttaaaaagttatttcattaaaagaatcacaacaattatttatttttcgcataaatcattcgttttcccc 43154754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 51066449 - 51066347
Alignment:
Q  28 tatttcataggaagaatcacaacaatcatttctttttt--acataaaccattcgttttcccctttcccacaacgaataagtgacaaattcaaatgacacc 125  Q
    |||||||| | |||||||||||||||||||| ||||||   ||||||||||| ||||||||  |||||| ||||||  |||||||||| ||||||||||     
T  51066449 tatttcattgaaagaatcacaacaatcattttttttttccgcataaaccatttgttttccc--ttcccaaaacgaaggagtgacaaatccaaatgacact 51066352  T
Q  126 gttag 130  Q
    |||||    
T  51066351 gttag 51066347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 29221670 - 29221545
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttta-cataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||| | ||||||||| ||  ||||||||| | | |||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||  |     
T  29221670 acttaaacggtcaatttggaagtctatttcattgaaggaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagag 29221571  T
Q  103 aagtgacaaattcaaatgacaccgtt 128  Q
     ||||||||||| ||| |||||||||    
T  29221570 gagtgacaaatttaaacgacaccgtt 29221545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 16072611 - 16072740
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcat----aggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacga 100  Q
    |||||||||||||||||||| ||||||||     || |||||||||||||||||||| ||| ||  ||||||| ||| ||||| |||||| |||||||      
T  16072611 ttaatcagtcaatttgaaaaactatttcaatgaaagaaagaatcacaacaatcatttttttcttcgcataaactatttgttttacccttttccacaacag 16072710  T
Q  101 ataagtgacaaattcaaatgacaccgttag 130  Q
    |  |||||||||  ||||||||| ||||||    
T  16072711 aggagtgacaaacccaaatgacatcgttag 16072740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 24449141 - 24449200
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttt 63  Q
    |||||||| ||||||||||||| ||||||| ||| ||||| ||||||||| |||||||||    
T  24449141 acttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaattatttctttt 24449200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 22423699 - 22423780
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttt--acataaaccattcgtttt 83  Q
    ||||||||| |||||||||||| |||||| || | |||||||| |||||| |||| ||||||  ||||||| ||||||||||    
T  22423699 acttaatcaatcaatttgaaaaactattttattgaaagaatcaaaacaattatttattttttccacataaatcattcgtttt 22423780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 187 - 220
Target Start/End: Original strand, 9925295 - 9925328
Alignment:
Q  187 tcttctgattctgattttttaataaagcttagct 220  Q
    ||||||||||||||||||||||||||||||||||    
T  9925295 tcttctgattctgattttttaataaagcttagct 9925328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 26329045 - 26328961
Alignment:
Q  39 aagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagtgacaaattcaaatgacac 124  Q
    |||||||||||| ||||||| ||||||  |||||||||| | ||||||||||||||||||| |  | ||| ||||||||| |||||    
T  26329045 aagaatcacaacgatcatttattttttggataaaccatttg-tttcccctttcccacaacggaggaatgataaattcaaacgacac 26328961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 2e-66; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 34524000 - 34523787
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||    
T  34524000 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttctttttcatataaaccattcgttttcccctttcccacaacggata 34523901  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
    |||||||||| |||| |||||||||| |||| ||||||||| |  |||||||       |||||| |||||||||||| ||||||||||||||||||| |    
T  34523900 agtgacaaatccaaacgacaccgttattaaattctacctcttt--cacttaatttttttgtatttcgtttcatgtttagaagctcttctgattctgat-t 34523804  T
Q  204 tttaataaagcttagct 220  Q
    |||||||||||||||||    
T  34523803 tttaataaagcttagct 34523787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 39697985 - 39697776
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataag 105  Q
    ||||| |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  39697985 ttaattagtcaatttgaaaagctatttcattgaaagaatcacaacaattatttcttttttacataaaccattcgttttcgcctttcccacaacggataag 39697886  T
Q  106 tgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttt 205  Q
    |||||||| |||||||||| ||||||||| ||||||||||| |||||||        |||||| |||||||||||| || ||||||||||||||||||||    
T  39697885 tgacaaatccaaatgacactgttagtaaattctacctctctttcacttattttttttgtatttcgtttcatgtttagaaactcttctgattctgattttt 39697786  T
Q  206 taataaagct 215  Q
    ||||| ||||    
T  39697785 taatatagct 39697776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 12531574 - 12531790
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||    
T  12531574 acttaatcagtcaatttaaaaatctatttcattgaaagaatcacaacaatcatttctttttcacataaaccatttgttttcccctttcccacaacggata 12531673  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
    | ||||||||||||| ||| ||||||||||| | ||||||||| ||||||||        ||||| |||||||||||| |||||||||| ||||||||||    
T  12531674 aatgacaaattcaaacgacgccgttagtaaattatacctctctttcacttaatttttttatatttcgtttcatgtttagaagctcttcttattctgattt 12531773  T
Q  204 tttaataaagcttagct 220  Q
    |||||||||||||||||    
T  12531774 tttaataaagcttagct 12531790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 23567323 - 23567117
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||  ||||||||| | ||| ||||||||||| |||||||||| |||||||||||||||||| || |||||||||||| |||    
T  23567323 acttaatcagtcaatttgaaatactatttcattgaaagtatcacaacaatgatttctttttcacataaaccattcgtttttccttttcccacaacggata 23567224  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
    | |||||||| |||| ||| ||||||||||| |||||| |||| ||||||||       |||||| |||||||||||| ||||||||   |||||  |||    
T  23567223 aatgacaaatccaaacgacgccgttagtaaattctaccactctttcacttaa-ttttttgtatttcgtttcatgtttagaagctctt---attctatttt 23567128  T
Q  204 tttaataaagc 214  Q
    |||||||||||    
T  23567127 tttaataaagc 23567117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 32098227 - 32098012
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||| ||| ||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||  |      
T  32098227 acttaatcagtcaatttggaaaactatttcattgaaagaatcacaacaattatttcttttttgcataaaccattcgttttccccattcccacaacagagg 32098128  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| ||| |||| |||||||||| ||||| |  || ||||| ||||||||        ||||| |||||||||||| ||| || |||||||  ||||    
T  32098127 agtgacgaatccaaacgacaccgttacgtaaatttcacttctctttcacttaatttttttttatttcgtttcatgtttagaagttcatctgatttcgatt 32098028  T
Q  203 ttttaataaagcttag 218  Q
    ||||||| | ||||||    
T  32098027 ttttaatgatgcttag 32098012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 5869371 - 5869253
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||   ||||||||||| ||||||||  ||||||||| |||      
T  5869371 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcattttttttccgcataaaccatttgttttccc--ttcccacaatgaagg 5869274  T
Q  104 agtgacaaattcaaatgacac 124  Q
    ||||||||||||||| |||||    
T  5869273 agtgacaaattcaaacgacac 5869253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 43926372 - 43926246
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||| ||| |||||| ||||||   |     
T  43926372 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgctttacccttttccacaatagag 43926273  T
Q  103 aagtgacaaattcaaatgacaccgtta 129  Q
     |||||||||| |||| ||||||||||    
T  43926272 gagtgacaaatccaaacgacaccgtta 43926246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 3628793 - 3628598
Alignment:
Q  7 taatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagt 106  Q
    |||||||||||||||||||| |||||||| | ||||||||||||||| ||||||||||  ||||||||||||||||| || ||||| || ||| |  |||    
T  3628793 taatcagtcaatttgaaaagttatttcattgaaagaatcacaacaattatttctttttcgcataaaccattcgtttttccgtttcctacgacgtaggagt 3628694  T
Q  107 gacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    ||| | | |||| ||||| |||| ||||| |  |||||||| ||||||||        | |||| ||||||||||||||| |||| |||||||||||    
T  3628693 gac-attccaaacgacacagttaggtaaatttcacctctctttcacttaattttattttgttttctttcatgtttaaaagttcttttgattctgatt 3628598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 18420658 - 18420531
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| || |||  ||||||  |     
T  18420658 acttaatcagtcaatttgaaaagctgtttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttaccttttttcacaacagag 18420559  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  18420558 gagtgacaaatccaaacgacaccgttag 18420531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 13585316 - 13585409
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaac 98  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||    
T  13585316 ttaatcagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaac 13585409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 3471615 - 3471710
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaac 98  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| ||  ||| |||||||| |||| |||||| |||||||    
T  3471615 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcatgaaccattcattttacccttttccacaac 3471710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 7858100 - 7858227
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttta-cataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| |||| || |||||   |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||  |     
T  7858100 acttaatcagtcaatttggaaagttaattcatttaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagag 7858199  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     ||||| |||| ||||||||||||||||    
T  7858200 gagtgaaaaatccaaatgacaccgttag 7858227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 18112131 - 18112259
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt--tttacataaaccattcgttttcccctttcccacaacgaa 101  Q
    |||||||||||||||||| ||| |||||| || | |||||||||||||||||||| |||  ||  ||||||||||||||||| |||||| ||||||   |    
T  18112131 acttaatcagtcaatttggaaaactattttattgaaagaatcacaacaatcattttttttcttcgcataaaccattcgttttacccttttccacaataga 18112230  T
Q  102 taagtgacaaattcaaatgacaccgttag 130  Q
      |||||||||| |||| |||||||||||    
T  18112231 ggagtgacaaatccaaacgacaccgttag 18112259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 35875022 - 35875128
Alignment:
Q  113 ttcaaatgacaccgttag-taaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttttaataa 211  Q
    ||||||||||| |||||| ||||||| |||||||  ||||||||        |||||||||||||||||||||| ||||||||||||||||||||||| |    
T  35875022 ttcaaatgacatcgttaggtaaactccacctctcgttcacttaattttattttattttgtttcatgtttaaaagttcttctgattctgattttttaatga 35875121  T
Q  212 agcttag 218  Q
    |||||||    
T  35875122 agcttag 35875128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 30915337 - 30915214
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttca-taggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||  ||||||  ||| | ||||||| ||||||||||  |     
T  30915337 acttaatcagtcaatttgaaaagctatttcattaaaaagaatcacaacaatcatttctttttcgcataaataatttg-tttccccattcccacaacagag 30915239  T
Q  103 aagtgacaaattcaaatgacaccgt 127  Q
    || ||| |||| ||||| |||||||    
T  30915238 aaatgataaatccaaataacaccgt 30915214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 43968119 - 43967999
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| | |||| |||||||  |     
T  43968119 acttaatcaatcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttactcttttccacaacagag 43968020  T
Q  103 aagtgacaaattcaaatgaca 123  Q
     |||||||||| |||| ||||    
T  43968019 gagtgacaaatccaaacgaca 43967999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 44665095 - 44665000
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaac 98  Q
    |||||||||||| ||||| |||| |||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||    
T  44665095 acttaatcagtctatttggaaagttatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaac 44665000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 36515202 - 36514999
Alignment:
Q  7 taatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttta-cataaaccattcgttttcccctttcccacaacgaataag 105  Q
    |||||||| ||||| |||| ||||||||| | ||||||||||||||| |||| ||| ||  |||||| |||| |||||||| ||||| || ||| |  ||    
T  36515202 taatcagttaatttaaaaaactatttcattgaaagaatcacaacaattatttttttcttcgcataaatcatttgttttcccatttcctacgacgtaggag 36515103  T
Q  106 tgacaaattcaaatgacaccgttag-taaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatttt 204  Q
    |||||  | |||| ||||||||||| |||| |  | |||||| ||||||||        | ||||||||| |||||||||| ||||||||||||||||||    
T  36515102 tgacat-tccaaacgacaccgttagataaatttcagctctctttcacttaattttattttgttttgtttcgtgtttaaaagttcttctgattctgatttt 36515004  T
Q  205 ttaat 209  Q
    |||||    
T  36515003 ttaat 36514999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 1004073 - 1004170
Alignment:
Q  4 acttaatcagtcaatttgaaaagct-atttcataggaagaatcacaacaatcatttctttt--ttacataaaccattcgttttcccctttcccacaac 98  Q
    ||||||||||||||||||||||  | ||||||| | |||||||||||||||||||| ||||  |  ||||||||||||||||| |||||| |||||||    
T  1004073 acttaatcagtcaatttgaaaaaattatttcattgaaagaatcacaacaatcattttttttcatcgcataaaccattcgttttacccttttccacaac 1004170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 29372374 - 29372463
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccac 95  Q
    |||||||||||||||| |||| ||||  || | |||||| ||||||||||||| |||||  |||||||||||| ||||||||||| ||||    
T  29372374 ttaatcagtcaatttggaaagttattcaattgaaagaatgacaacaatcatttatttttcgcataaaccattcattttcccctttgccac 29372463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 42076123 - 42076337
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttac--ataaaccattcgttttcccctttcccacaacgaa 101  Q
    ||||||||| |||||||||||||||||  ||| | |||||||| || ||| |||  |||||| |  |||||| |||||||||||||||| | || | | |    
T  42076123 acttaatcaatcaatttgaaaagctataacattgaaagaatcataataataattatttttttccgcataaactattcgttttccccttttctacga-gta 42076221  T
Q  102 taagtgacaaattcaaatgacaccgttag-taaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctga 200  Q
      |||||||  | |||||||||||||||| |||| |  |||| ||| ||||||||        | |||||||||||||||||||| |||| |||||||||    
T  42076222 ggagtgacat-tccaaatgacaccgttaggtaaatttcacctatctttcacttaattttattttgttttgtttcatgtttaaaagttcttttgattctga 42076320  T
Q  201 ttttttaataaagctta 217  Q
    ||||||||| |||||||    
T  42076321 ttttttaatgaagctta 42076337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 7 - 154
Target Start/End: Original strand, 42777763 - 42777911
Alignment:
Q  7 taatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagt 106  Q
    |||| |||||||||  |||||||||| ||   |||||||||||||||||||| ||||   |||| ||||||||||||| | |||||||||||| |  |||    
T  42777763 taattagtcaatttagaaagctatttaattaaaagaatcacaacaatcattttttttccgcatataccattcgttttctcatttcccacaacggaggagt 42777862  T
Q  107 gacaaattcaaatgacaccgtt-agtaaactctacctctctgtcactta 154  Q
    ||||||  ||||  |||||||| |||||| |  |||||||| |||||||    
T  42777863 gacaaaaccaaaccacaccgttcagtaaatttcacctctctttcactta 42777911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 33452816 - 33452901
Alignment:
Q  14 tcaatttgaaaagctatttca-taggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacg 99  Q
    ||||||||||||| ||||| | ||  ||||||||||||||||||||||||||  |||||| |||| | |||||||||||||||||||    
T  33452816 tcaatttgaaaagttattttaataaaaagaatcacaacaatcatttctttttcgcataaatcatttg-tttcccctttcccacaacg 33452901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 27074589 - 27074684
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaac 98  Q
    ||||||||||||||||| |||  ||||||||| | || ||||||||||||||||| ||| ||  ||||||||||| ||||| || ||| |||||||    
T  27074589 acttaatcagtcaatttaaaagtctatttcattgaaaaaatcacaacaatcatttttttcttcgcataaaccatttgttttacctttttccacaac 27074684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 35874941 - 35875000
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttt 63  Q
    |||||||| ||||||||||||| ||||||| ||| ||||| ||||||||| |||||||||    
T  35874941 acttaatcggtcaatttgaaaaactatttcttagaaagaaccacaacaattatttctttt 35875000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 42951818 - 42951727
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaat----cacaacaatcatttcttt-tttacataaaccattcgttttccccttt 90  Q
    ||||||||||||||||||||||| ||||| || | ||||||    |||||||||||||| ||| ||  ||||||||||||||||| ||||||    
T  42951818 acttaatcagtcaatttgaaaagttattttattgaaagaatcacacacaacaatcatttttttcttcgcataaaccattcgttttacccttt 42951727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 3575175 - 3575117
Alignment:
Q  18 tttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccat 76  Q
    |||||||||||||||||| | |||||||||   ||||||||| ||||| ||||||||||    
T  3575175 tttgaaaagctatttcattgaaagaatcacctaaatcatttcatttttgcataaaccat 3575117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 5971805 - 5971742
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataa 71  Q
    ||||||||||||||||| ||||||||||| |    ||||||||||||||||| |||| |||| |||||    
T  5971805 acttaatcagtcaatttaaaaagctatttta----aagaatcacaacaatcagttctcttttgcataa 5971742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 33452934 - 33452990
Alignment:
Q  164 tattttgtttcatgtttaaaagctcttctgattctgattttttaataaagcttagct 220  Q
    ||||| |||||||||||| ||| |||||| ||| |||||||||||| ||| ||||||    
T  33452934 tatttcgtttcatgtttagaagttcttctaattatgattttttaatgaagtttagct 33452990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 2e-63; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 12971421 - 12971637
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  12971421 acttaatcagtcaatttgaaaagctatttcatcgaaagaatcacaacaatcatttctttttcacataaaccattcgttttcccctttcccacaacggata 12971520  T
Q  104 agtgacaaattcaaatgacaccgttagtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattt 203  Q
    |||||||||| |||| ||| ||||||||||| ||||||| ||| |||||||        |||||| |||||||||| | |||||   |||||||||||||    
T  12971521 agtgacaaatccaaacgactccgttagtaaattctacctatctttcacttattttttttgtatttcgtttcatgttaagaagctaaactgattctgattt 12971620  T
Q  204 tttaataaagcttagct 220  Q
    |||||||||| ||||||    
T  12971621 tttaataaagtttagct 12971637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 50371149 - 50371365
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||  |||||| |||| ||||| ||||| ||||||||| |      
T  50371149 acttaatcagtcaatttgaaaaactgtttcattgaaagaatcacaacaatcatttctttttcgcataaatcattagtttttcccttacccacaacggagg 50371248  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||||||| ||||  ||| ||||| ||||| |  |||||||| ||||||||        ||||| |||||||||||| ||| |||| |||||||||||    
T  50371249 agtgacaaatccaaacaacatcgttaggtaaatttcacctctctttcacttaattttttt-tatttcgtttcatgtttagaagttcttatgattctgatt 50371347  T
Q  203 ttttaataaagcttagct 220  Q
    ||||||| ||||||||||    
T  50371348 ttttaatgaagcttagct 50371365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 4 - 209
Target Start/End: Complemental strand, 13120915 - 13120710
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||| ||||||||| | ||||||||| ||||| ||||||||||  |||||||||||| ||||||||||||| || ||| |      
T  13120915 acttaatcagtcaatttgaaaaactatttcattgaaagaatcaccacaattatttctttttcgcataaaccattcattttcccctttcctacgacgtagg 13120816  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| | | |||| |||||||||| ||||| |  |||||||| ||||||||        | ||||||||| |||||||||| ||||||||||||||||    
T  13120815 agtgac-attccaaacgacaccgttaggtaaatttcacctctctatcacttaattttattttgttttgtttcgtgtttaaaagttcttctgattctgatt 13120717  T
Q  203 ttttaat 209  Q
    |||||||    
T  13120716 ttttaat 13120710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 27703578 - 27703370
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||||||||||| ||||  ||||||||||||||||| |||||| |||| ||| |      
T  27703578 acttaatcagtcaatttggaaagctatttcatcgaaagaatcacaacaatcatttcattttcgcataaaccattcgtttttcccttttccaccacggaag 27703479  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| ||| |||| ||||| |||| ||||| |  |||||||  ||||||||        ||||| |||||||||||| ||| | || |||||||||||    
T  27703478 agtgac-aatccaaacgacactgttaggtaaatttcacctctccttcacttaattt-----tatttcgtttcatgtttagaagttattatgattctgatt 27703385  T
Q  203 ttttaataaagctta 217  Q
    |||||| ||||||||    
T  27703384 ttttaacaaagctta 27703370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 18127986 - 18127859
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||| |||| ||| ||  ||||||| ||||||||| |||||| ||||||| ||     
T  18127986 acttaatcagtcaatttgaaaagctatttcattgcaagaatcacaacaattatttttttcttcgcataaactattcgttttacccttttccacaacaaag 18127887  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  18127886 gagtgacaaatccaaacgacaccgttag 18127859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 4 - 212
Target Start/End: Complemental strand, 44836770 - 44836566
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||| ||||||||  | ||||||||||    ||||||||||||  ||||||||||||||||| ||||||||||| ||| |      
T  44836770 acttaatcagtcaatttgaaaaactatttcactgaaagaatcaca----tcatttctttttcgcataaaccattcgtttttccctttcccacgacgtagg 44836675  T
Q  104 agtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgatt 202  Q
    |||||| | | |||||||||||| || ||||| |  || ||||| ||||||||        |||||||||||||||||||||| |||| ||||||| |||    
T  44836674 agtgac-attccaaatgacaccgctaggtaaatttcacatctctttcacttaattttattttattttgtttcatgtttaaaagttcttatgattctaatt 44836576  T
Q  203 ttttaataaa 212  Q
    ||||||||||    
T  44836575 ttttaataaa 44836566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 17674403 - 17674278
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||||||  ||||||||||| |||||||||||||| || ||| |      
T  17674403 acttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaattatttctttttcgcataaaccatttgttttcccctttcctacgacgtaag 17674304  T
Q  104 agtgacaaattcaaatgacaccgttag 130  Q
    |||||| | | ||||||||||||||||    
T  17674303 agtgac-attccaaatgacaccgttag 17674278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 25930619 - 25930745
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||| ||||||||||||||||| | ||| |||||||||||||||| || |||  |||||||||| ||||| |||||| |||||||  ||     
T  25930619 acttaatcagtcaacttgaaaagctatttcattgaaaggatcacaacaatcattttttctttggataaaccatttgttttacccttttccacaacagatg 25930718  T
Q  104 agtgacaaattcaaatgacaccgttag 130  Q
    |||||||||| |||| |||||||||||    
T  25930719 agtgacaaatccaaacgacaccgttag 25930745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 48722419 - 48722292
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| ||||||||||||| | || ||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||  |     
T  48722419 acttaatcagtcaatttggaaagctatttcattgaaataatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacagag 48722320  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  48722319 gagtgacaaatccaaacgacaccgttag 48722292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 37873811 - 37873723
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcc 92  Q
    ||||||||||| |||||||||| || |||||| | ||||||||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  37873811 acttaatcagttaatttgaaaaactgtttcattgaaagaatcacaacaattatttcttttctgcataaaccattcgttttcccctttcc 37873723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 51110150 - 51110023
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttta-cataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||  ||||||||||||| | ||||||||||||||| | || ||| ||  ||||||||||| |||||  ||||| ||||||| ||     
T  51110150 acttaatcagtcaatttagaaagctatttcattgaaagaatcacaacaataagttttttcttcgcataaaccatttgttttatccttttccacaacaaag 51110051  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||||||||||||||||||||    
T  51110050 gagtgacaaattcaaatgacaccgttag 51110023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 6150738 - 6150864
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatc-atttcttttttacataaaccattcgtttt-cccctttcccacaacgaata 103  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||| |||| || || |||||||||||||||||| ||  ||| |||||||  |      
T  6150738 ttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacaatcaattttttcttcacataaaccattcgttttaccttttttccacaacagagg 6150837  T
Q  104 agtgacaaattcaaatgacaccgttag 130  Q
    |||||||||| |||| |||||||||||    
T  6150838 agtgacaaatccaaacgacaccgttag 6150864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 12884186 - 12884100
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttccccttt 90  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||||||| || ||  ||||||||||||||||| ||||||    
T  12884186 acttaatcagtcaatttaaaaagctatttcattgaaagaatcacaacaatcattttttcttcgcataaaccattcgttttacccttt 12884100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 7 - 220
Target Start/End: Complemental strand, 26486419 - 26486208
Alignment:
Q  7 taatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagt 106  Q
    |||||| | ||| |||||||||||||||| | || ||||| |||||| ||||||||||  ||||||| ||||||||||| |||||| || ||| | ||||    
T  26486419 taatcacttaatctgaaaagctatttcattgaaaaaatcataacaattatttctttttcgcataaactattcgttttcctctttcctacgacgtagaagt 26486320  T
Q  107 gacaaattcaaatgacaccgttag-taaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgattttt 205  Q
    ||||  | |||||||||||||| | |||| |  |||||| |  || ||||        |||||||||||||||||||||| |||||||||||||||||||    
T  26486319 gacat-tccaaatgacaccgtttggtaaatttcacctcttt--caattaattttattttattttgtttcatgtttaaaagttcttctgattctgattttt 26486223  T
Q  206 taataaagcttagct 220  Q
     ||| ||||||||||    
T  26486222 aaatgaagcttagct 26486208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 30004956 - 30004830
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    ||||||||| | |||||||||||||||||||| | ||||||| |||||||||||| || ||  ||||||||||||||||| || ||| |||||||  |      
T  30004956 acttaatcaattaatttgaaaagctatttcattgaaagaatcgcaacaatcatttgttcttcccataaaccattcgttttacctttttccacaacagagg 30004857  T
Q  104 agtgacaaattcaaatgacaccgttag 130  Q
    ||||||||||||||| || ||||||||    
T  30004856 agtgacaaattcaaacgataccgttag 30004830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 33124679 - 33124559
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||||||||| ||| || |||||||||||||||| | || ||| |||||||  |     
T  33124679 acttaataagtcaatttgaaaagctatttcattgaaagaatcacaacaatcatttttttcttcacataaaccattcgttataccattttccacaacagag 33124580  T
Q  103 aagtgacaaattcaaatgaca 123  Q
     |||||||||| |||| ||||    
T  33124579 gagtgacaaatccaaacgaca 33124559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 42740125 - 42740213
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcc 92  Q
    ||||||| |||||||||||||| ||||||||| | ||||||| ||||||| ||||||||||  ||||||| ||||||||||||||||||    
T  42740125 acttaattagtcaatttgaaaaactatttcattgaaagaatcgcaacaattatttctttttcgcataaacaattcgttttcccctttcc 42740213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 22 - 149
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| ||||  ||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| | |||||  |     
T  22 acttaatcagtcaatttggaaagtgatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttctacaacagag 121  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  122 gagtgacaaatccaaacgacaccgttag 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 10109735 - 10109862
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| ||||| ||||||| | |||||||||||||||||||| ||| ||  ||||||| ||||||||| |||||| |||||||  |     
T  10109735 acttaatcagtcaatttggaaagcaatttcattgaaagaatcacaacaatcatttttttcttcgcataaactattcgttttacccttttccacaacagag 10109834  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| ||| |||||||    
T  10109835 gagtgacaaatccaaacgacgccgttag 10109862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 28885720 - 28885593
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||| |||||||  ||||||||||||| | |||||||||||||||||||| ||| ||  |||||||||||||||||  | ||| |||||||  ||    
T  28885720 acttaatcaatcaattttgaaagctatttcattgtaagaatcacaacaatcatttttttcttcgcataaaccattcgttttatctttttccacaacagat 28885621  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||||||||    
T  28885620 gagtgacaaatccaaacgacaccgttag 28885593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 30899671 - 30899800
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttta---cataaaccattcgttttcccctttcccacaacga 100  Q
    ||||||| |||||||||| ||||||||||||| | |||||||||||||||||||| |||||     ||||||||||||||||| |||||| |||||||      
T  30899671 acttaattagtcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttttcttcgcataaaccattcgttttacccttttccacaacag 30899770  T
Q  101 ataagtgacaaattcaaatgacaccgttag 130  Q
    |  | |||||||| |||| |||||||||||    
T  30899771 aggaatgacaaatccaaacgacaccgttag 30899800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 4 - 209
Target Start/End: Complemental strand, 22386886 - 22386680
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaa-tcatttcttttttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||| | || | |||||| ||||||||||| |||||||||||||| || ||| |     
T  22386886 acttaatcagtcaatttgaaaaactatttcattgaaagaatcacaacaattaatattttttttgcataaaccatttgttttcccctttcctacgacgtag 22386787  T
Q  103 aagtgacaaattcaaatgacaccgtt-agtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgat 201  Q
     |||||| | | |||| |||| |||| | |||| |  || ||||| ||||||||        ||||||||||| |||||||||  |||| ||||||||||    
T  22386786 gagtgac-attccaaacgacatcgttaaataaatttcacatctctttcacttaattttattttattttgtttcgtgtttaaaaaatcttatgattctgat 22386688  T
Q  202 tttttaat 209  Q
    ||||||||    
T  22386687 tttttaat 22386680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 5560498 - 5560622
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcat-ttcttttttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||||||||||| ||||| |||||||| | |||||||||||||||||| || ||||   ||||||| |||| ||||| | |||||||||||| |     
T  5560498 acttaatcagtcaatttaaaaagttatttcattgaaagaatcacaacaatcatatttttttccgcataaactattcattttctcttttcccacaacggag 5560597  T
Q  103 aagtgacaaattcaaatgacaccgt 127  Q
     |||||||||| ||||| |||||||    
T  5560598 gagtgacaaatccaaataacaccgt 5560622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 24556821 - 24556900
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgtttt 83  Q
    ||||||| |||||||||||||| |||||||||   ||||||||||||||| ||||||||||  |||||||||||||||||    
T  24556821 acttaataagtcaatttgaaaaactatttcatttaaagaatcacaacaattatttctttttcgcataaaccattcgtttt 24556900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 29208145 - 29208022
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaataa 104  Q
    ||||||||||||| || ||  ||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| ||||||   |  |    
T  29208145 ttaatcagtcaatctggaagtctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaatagagga 29208046  T
Q  105 gtgacaaattcaaatgacaccgtt 128  Q
    ||||||||| ||||||||||||||    
T  29208045 gtgacaaatccaaatgacaccgtt 29208022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 6333565 - 6333441
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||| ||| |||| ||||| ||   |||||||||||||||||||| ||||   ||||||||||||| ||||||  ||||||||||||||     
T  6333565 acttaatcagtcaaattggaaagttattttattaaaagaatcacaacaatcattttttttccgcataaaccattcgctttccc--ttcccacaacgaatg 6333468  T
Q  104 agtgacaaattcaaatgacaccgttag 130  Q
    |||||  ||| |||| ||||| |||||    
T  6333467 agtgaagaatccaaacgacactgttag 6333441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 17487332 - 17487237
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaac 98  Q
    ||||||| | |||||||| |||| |||||||| | |||||||||||||||||||| ||| ||| |||||||||||||||||  ||||| |||||||    
T  17487332 acttaataaatcaatttggaaagttatttcattgaaagaatcacaacaatcatttttttctttgcataaaccattcgttttatccttttccacaac 17487237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 50552510 - 50552637
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||| |||||||||||||| |||||||| | |||||||||||||||||||| ||| ||   ||||||||||| |||| || ||| |||||||  |     
T  50552510 acttaatcggtcaatttgaaaagttatttcattgaaagaatcacaacaatcatttttttcttcgtataaaccattcattttacctttttccacaacatag 50552609  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     |||||||||| |||| |||||| ||||    
T  50552610 gagtgacaaatccaaacgacaccattag 50552637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 220
Target Start/End: Original strand, 9777432 - 9777646
Alignment:
Q  8 aatcagtcaatttgaaaagctatttca-taggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaataagt 106  Q
    |||||||||||||||| | |||||||| ||  ||||||||||||||||||| | ||||  ||||||||||| | |||||||||||||| || | || | |    
T  9777432 aatcagtcaatttgaataactatttcaataaaaagaatcacaacaatcattaccttttctcataaaccatttg-tttcccctttcccataatggatgaat 9777530  T
Q  107 gacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaa-nnnnnnngtattttgtttcatgtttaaaagctcttctgattctgatttt 204  Q
    || |||| |||| |||||||||| ||||| |  || ||||| ||||||||         ||||| |||||||||||| ||| | |||| |||||||||||    
T  9777531 gataaatccaaacgacaccgttaggtaaatttcacttctctttcacttaattttttttttatttagtttcatgtttagaagttattctaattctgatttt 9777630  T
Q  205 ttaataaagcttagct 220  Q
    ||||| ||| ||||||    
T  9777631 ttaatgaagtttagct 9777646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 15441305 - 15441516
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttca-taggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    ||||||||| |||||||  |||||||||||| ||  ||||||||||||||| | ||||||||| |||||| ||||| |||| |||||| |||||||  |     
T  15441305 acttaatcactcaatttataaagctatttcattaaaaagaatcacaacaat-aattcttttttgcataaatcattcatttt-cccttttccacaacagaa 15441402  T
Q  103 aagtgacaaattcaaatgacaccgtta-gtaaactctacctctctgtcacttaannnnnnngtattttgtttcatgtttaaaagctcttctgattctgat 201  Q
     |||||||||| |||| ||| |||||| ||||| |  |||||||| |||||||         ||||  |||||||||||| ||| |||||||||| ||||    
T  15441403 gagtgacaaatccaaacgacgccgttaggtaaatttcacctctctttcactta--ttttttttattccgtttcatgtttagaagttcttctgattttgat 15441500  T
Q  202 tttttaataaagctta 217  Q
    |||||||| |||||||    
T  15441501 tttttaatgaagctta 15441516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 1269574 - 1269689
Alignment:
Q  12 agtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaa-cgaataagtgaca 110  Q
    ||||||||||||||||||||||||   |||||||||||||||||||| ||||   |||| | ||||||||||| |||||||||||| || |  |||||||    
T  1269574 agtcaatttgaaaagctatttcattaaaagaatcacaacaatcattt-ttttccgcatata-cattcgttttctcctttcccacaagcggaggagtgaca 1269671  T
Q  111 aattcaaatgacaccgtt 128  Q
    ||| |||| |||||||||    
T  1269672 aatccaaacgacaccgtt 1269689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 14084750 - 14084622
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatca--tttcttttttacataaaccattcgttttcccctttcccacaacgaa 101  Q
    |||||||||||||||||  ||||||||||||| | ||||||||||| |||||  ||| || ||  ||||||||||||||||| |||||  |||||||  |    
T  14084750 acttaatcagtcaatttagaaagctatttcattgaaagaatcacaataatcaatttttttcttcgcataaaccattcgttttacccttctccacaacaga 14084651  T
Q  102 taagtgacaaattcaaatgacaccgttag 130  Q
      |||||||||| |||| |||||| ||||    
T  14084650 ggagtgacaaatccaaacgacaccattag 14084622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 52055567 - 52055654
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatca-tttcttttttacataaaccattcgttttccccttt 90  Q
    ||||||||| |||||||| ||||||||||||| | ||||||||||||||||| ||| |  ||  ||||||||||||||||| ||||||    
T  52055567 acttaatcaatcaatttggaaagctatttcattgaaagaatcacaacaatcagtttttccttcgcataaaccattcgttttacccttt 52055654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 31369418 - 31369358
Alignment:
Q  39 aagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacg 99  Q
    ||||||||||| ||||||||||||||| |||||||||||| |||| || | ||||||||||    
T  31369418 aagaatcacaaaaatcatttcttttttgcataaaccattcatttttccttatcccacaacg 31369358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 20905336 - 20905210
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgtttt-cccctttcccacaacgaa 101  Q
    ||||| |||||||||||| ||  ||||||||| | ||||||||||||||| |||| ||| ||   |||||||||||||||| ||| ||| |||||||  |    
T  20905336 acttattcagtcaatttggaagtctatttcattgaaagaatcacaacaataatttttttcttcgtataaaccattcgttttaccctttttccacaacaga 20905237  T
Q  102 taagtgacaaattcaaatgacaccgtt 128  Q
      |||||||||| |||| |||||||||    
T  20905236 ggagtgacaaatccaaacgacaccgtt 20905210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 37873642 - 37873592
Alignment:
Q  167 tttgtttcatgtttaaaagctcttctgattctgattttttaataaagctta 217  Q
    ||||||||||||||||||| |||| ||||||| |||||||||| |||||||    
T  37873642 tttgtttcatgtttaaaagttcttatgattctaattttttaatgaagctta 37873592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 39080503 - 39080454
Alignment:
Q  171 tttcatgtttaaaagctcttctgattctgattttttaataaagcttagct 220  Q
    ||||||||||| ||| |||| |||||||||||||| ||| ||||||||||    
T  39080503 tttcatgtttagaagttcttatgattctgatttttcaatgaagcttagct 39080454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 1269727 - 1269775
Alignment:
Q  164 tattttgtttcatgtttaaaagctcttctgattctgattttttaataaa 212  Q
    ||||| |||||||||||| ||| |||  |||||||||||||||||||||    
T  1269727 tatttcgtttcatgtttagaagttctattgattctgattttttaataaa 1269775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 24556989 - 24557033
Alignment:
Q  176 tgtttaaaagctcttctgattctgattttttaataaagcttagct 220  Q
    |||||||||| |||||||||||| |||||| ||| ||||||||||    
T  24556989 tgtttaaaagttcttctgattctaatttttcaatgaagcttagct 24557033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 33124525 - 33124489
Alignment:
Q  170 gtttcatgtttaaaagctcttctgattctgatttttt 206  Q
    |||||||||||||||| |||||||||||||| |||||    
T  33124525 gtttcatgtttaaaagttcttctgattctgaattttt 33124489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 52240550 - 52240458
Alignment:
Q  39 aagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaataagtgacaaattcaaatgacaccgttag 130  Q
    |||||||||||||||||||| ||| ||  |||||| ||||| |||| |||||| |||||||  |  || |||||||||||| ||||| |||||    
T  52240550 aagaatcacaacaatcatttttttcttcgcataaatcattcattttgcccttttccacaacagaggagcgacaaattcaaacgacactgttag 52240458  T

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Target: scaffold0181 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 17181 - 17056
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatca-tttcttttttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||| ||||||||||| | | ||||||||||||||||| |||||| ||  ||||||||||||||||| || ||| ||||||| ||     
T  17181 acttaatcagtcaatttggaaagctatttcgttgaaagaatcacaacaatcattttcttcttcgcataaaccattcgttttaccattttccacaacaaag 17082  T
Q  103 aagtgacaaattcaaatgacaccgtt 128  Q
    |||||||||||||||| |||||||||    
T  17081 aagtgacaaattcaaacgacaccgtt 17056  T

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Target: scaffold0126 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 16725 - 16852
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcat-ttcttttttacataaaccattcgttttcccctttcccacaacgaat 102  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| ||||| || || ||  ||||||||||||||||| |||||| |||||||  |     
T  16725 acttaatcagtcaatttgaaaagctatttcattgaaagaatcacaacgatcatatttttcttcgcataaaccattcgttttacccttttccacaacagag 16824  T
Q  103 aagtgacaaattcaaatgacaccgttag 130  Q
     ||| |||||| |||| |||||||||||    
T  16825 gagtaacaaatccaaacgacaccgttag 16852  T

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Target: scaffold0564 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 1086 - 1203
Alignment:
Q  14 tcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttt-tttacataaaccattcgttttcccctttcccacaacgaataagtgacaaa 112  Q
    |||||||| ||||||||||||| | |||||||||||||||||||| ||| ||  ||||||||||||||||| |||||| |||||||  |  |||||||||    
T  1086 tcaatttggaaagctatttcattgaaagaatcacaacaatcatttttttcttcgcataaaccattcgttttacccttttccacaacataggagtgacaaa 1185  T
Q  113 ttcaaatgacaccgttag 130  Q
    | |||| |||||||||||    
T  1186 tccaaacgacaccgttag 1203  T

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Target: scaffold0035 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 22844 - 22727
Alignment:
Q  14 tcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttta-cataaaccattcgttttcccctttcccacaacgaataagtgacaaa 112  Q
    ||||| |||||| ||||||||| | ||||||||||| ||| |||| ||| ||  ||||||||||||||||| |||||| |||||||  |  |||||||||    
T  22844 tcaatatgaaaaactatttcattgaaagaatcacaataattatttttttcttcgcataaaccattcgttttacccttttccacaacataggagtgacaaa 22745  T
Q  113 ttcaaatgacaccgttag 130  Q
    |||||| |||||||||||    
T  22744 ttcaaacgacaccgttag 22727  T

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Target: scaffold0100 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 46222 - 46099
Alignment:
Q  4 acttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttcttttttacataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||||| ||  ||||||||| | || ||||||||||||||||| || || |||||||||||||||||| | ||||  ||||| | |      
T  46222 acttaatcagtcaatttggaagtctatttcattgaaataatcacaacaatcattttttcttcacataaaccattcgttttactctttttcacaaag-agg 46124  T
Q  104 agtgacaaattcaaatgacaccgtt 128  Q
    |||||||||| |||| |||||||||    
T  46123 agtgacaaatccaaacgacaccgtt 46099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 8442 - 8332
Alignment:
Q  6 ttaatcagtcaatttgaaaagctatttcataggaagaatcacaacaatcatttctttttt--acataaaccattcgttttcccctttcccacaacgaata 103  Q
    |||||||||||||||  ||| ||||||||| | ||||||||||| ||| |||| ||||||  ||| |||||||||||||||||| ||||| ||||| |      
T  8442 ttaatcagtcaatttcgaaaactatttcattgaaagaatcacaaaaattattttttttttccacacaaaccattcgttttcccccttcccgcaacggagg 8343  T
Q  104 agtgacaaatt 114  Q
    |||||||||||    
T  8342 agtgacaaatt 8332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 99092 - 99136
Alignment:
Q  165 attttgtttcatgtttaaaagctcttctgattctgattttttaat 209  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||    
T  99092 atttcgtttcatgtttagaagttcttctgattctgattttttaat 99136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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