View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13787_high_11 (Length: 455)

Name: NF13787_high_11
Description: NF13787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13787_high_11
NF13787_high_11
[»] chr8 (22 HSPs)
chr8 (18-440)||(15165875-15166311)
chr8 (18-440)||(15079937-15080373)
chr8 (132-298)||(24589893-24590059)
chr8 (131-305)||(18160485-18160660)
chr8 (172-297)||(12563718-12563843)
chr8 (222-297)||(811547-811622)
chr8 (222-305)||(22150897-22150981)
chr8 (222-305)||(23801326-23801410)
chr8 (222-297)||(248446-248521)
chr8 (222-297)||(3352795-3352870)
chr8 (222-297)||(6157704-6157779)
chr8 (222-297)||(9347736-9347811)
chr8 (222-297)||(13692730-13692805)
chr8 (222-297)||(15784870-15784945)
chr8 (222-297)||(26116945-26117020)
chr8 (222-297)||(29083029-29083104)
chr8 (222-297)||(36084559-36084634)
chr8 (222-297)||(36299564-36299639)
chr8 (222-297)||(44487752-44487827)
chr8 (222-270)||(17292805-17292853)
chr8 (222-270)||(21294908-21294956)
chr8 (131-207)||(22465441-22465517)
[»] chr1 (13 HSPs)
chr1 (175-305)||(34523133-34523264)
chr1 (222-297)||(19163840-19163915)
chr1 (222-305)||(22651287-22651371)
chr1 (222-297)||(3178180-3178255)
chr1 (222-297)||(5839783-5839858)
chr1 (222-297)||(7513853-7513928)
chr1 (134-261)||(9331117-9331244)
chr1 (222-297)||(12737107-12737182)
chr1 (222-297)||(21870242-21870317)
chr1 (222-297)||(35642208-35642283)
chr1 (222-297)||(38101664-38101739)
chr1 (222-297)||(47612103-47612178)
chr1 (132-305)||(23977764-23977937)
[»] chr5 (32 HSPs)
chr5 (137-305)||(18008806-18008975)
chr5 (222-305)||(21670091-21670175)
chr5 (222-297)||(9340203-9340278)
chr5 (222-297)||(14034290-14034365)
chr5 (222-297)||(14453550-14453625)
chr5 (222-297)||(14564591-14564666)
chr5 (222-297)||(15999834-15999909)
chr5 (222-297)||(17611310-17611385)
chr5 (222-297)||(17723166-17723241)
chr5 (222-297)||(22150764-22150839)
chr5 (222-297)||(22680364-22680439)
chr5 (222-297)||(23300525-23300600)
chr5 (222-297)||(23366184-23366259)
chr5 (222-297)||(23400159-23400234)
chr5 (222-297)||(23701028-23701103)
chr5 (222-297)||(24571320-24571395)
chr5 (222-297)||(24812161-24812236)
chr5 (222-297)||(24823414-24823489)
chr5 (222-297)||(27048775-27048850)
chr5 (222-297)||(27464410-27464485)
chr5 (222-297)||(30233964-30234039)
chr5 (222-297)||(31352782-31352857)
chr5 (222-297)||(31837728-31837803)
chr5 (222-297)||(34056181-34056256)
chr5 (222-297)||(35219751-35219826)
chr5 (222-297)||(36589055-36589130)
chr5 (222-297)||(36691946-36692021)
chr5 (222-297)||(37736505-37736580)
chr5 (222-297)||(39497425-39497500)
chr5 (222-297)||(42047028-42047103)
chr5 (222-300)||(31444136-31444214)
chr5 (222-305)||(5297080-5297164)
[»] chr4 (20 HSPs)
chr4 (133-246)||(11534940-11535053)
chr4 (133-246)||(11452432-11452546)
chr4 (223-297)||(457214-457288)
chr4 (222-297)||(4991924-4991999)
chr4 (222-297)||(5018788-5018863)
chr4 (222-297)||(10297322-10297397)
chr4 (222-297)||(10744727-10744802)
chr4 (222-297)||(10958496-10958571)
chr4 (222-297)||(16262516-16262591)
chr4 (222-297)||(18756619-18756694)
chr4 (222-297)||(19948524-19948599)
chr4 (222-297)||(22003068-22003143)
chr4 (222-297)||(24646982-24647057)
chr4 (222-297)||(27663263-27663338)
chr4 (222-297)||(30930622-30930697)
chr4 (222-297)||(36024942-36025017)
chr4 (222-297)||(43250111-43250186)
chr4 (222-297)||(55749381-55749456)
chr4 (222-305)||(39530303-39530387)
chr4 (222-270)||(49514187-49514235)
[»] chr7 (23 HSPs)
chr7 (183-305)||(24830782-24830904)
chr7 (217-305)||(5301287-5301376)
chr7 (169-270)||(13662990-13663091)
chr7 (131-207)||(16157448-16157524)
chr7 (222-297)||(461195-461270)
chr7 (222-297)||(1994175-1994250)
chr7 (222-297)||(2709822-2709897)
chr7 (222-297)||(4218627-4218702)
chr7 (222-297)||(8006275-8006350)
chr7 (222-297)||(8623964-8624039)
chr7 (222-297)||(9091853-9091928)
chr7 (222-297)||(11011806-11011881)
chr7 (222-297)||(17954323-17954398)
chr7 (222-297)||(20985876-20985951)
chr7 (222-297)||(22095760-22095835)
chr7 (222-297)||(24740720-24740795)
chr7 (222-297)||(25205438-25205513)
chr7 (222-297)||(26394303-26394378)
chr7 (222-297)||(26657544-26657619)
chr7 (222-297)||(40046313-40046388)
chr7 (222-297)||(42872467-42872542)
chr7 (222-270)||(10653208-10653256)
chr7 (222-305)||(18435106-18435190)
[»] scaffold0758 (1 HSPs)
scaffold0758 (133-207)||(1013-1087)
[»] scaffold0004 (3 HSPs)
scaffold0004 (131-297)||(4613-4779)
scaffold0004 (131-297)||(5977-6143)
scaffold0004 (131-297)||(11770-11936)
[»] chr3 (34 HSPs)
chr3 (131-263)||(18702750-18702882)
chr3 (222-297)||(13145771-13145846)
chr3 (222-297)||(13376792-13376867)
chr3 (222-297)||(13387386-13387461)
chr3 (222-305)||(1060181-1060265)
chr3 (222-305)||(15655157-15655241)
chr3 (222-297)||(508295-508370)
chr3 (222-297)||(4429797-4429872)
chr3 (222-297)||(4750356-4750431)
chr3 (222-297)||(5541146-5541221)
chr3 (222-297)||(5583758-5583833)
chr3 (222-297)||(5869821-5869896)
chr3 (222-297)||(8781300-8781375)
chr3 (222-312)||(8999898-8999989)
chr3 (222-297)||(10630948-10631023)
chr3 (222-297)||(11276510-11276585)
chr3 (222-297)||(13128310-13128385)
chr3 (222-297)||(13265783-13265858)
chr3 (222-297)||(15839859-15839934)
chr3 (222-297)||(16395172-16395247)
chr3 (222-297)||(17248935-17249010)
chr3 (222-297)||(19785059-19785134)
chr3 (222-297)||(20677322-20677397)
chr3 (222-297)||(23763931-23764006)
chr3 (222-297)||(24387643-24387718)
chr3 (222-297)||(24666507-24666582)
chr3 (222-297)||(28318363-28318438)
chr3 (222-297)||(38201289-38201364)
chr3 (222-297)||(39378721-39378796)
chr3 (222-297)||(41690286-41690361)
chr3 (223-297)||(17013822-17013896)
chr3 (222-270)||(6494496-6494544)
chr3 (222-305)||(29937670-29937754)
chr3 (222-305)||(29986824-29986908)
[»] chr2 (15 HSPs)
chr2 (222-305)||(22745562-22745646)
chr2 (222-297)||(9901718-9901793)
chr2 (222-319)||(43351995-43352093)
chr2 (222-297)||(4216488-4216563)
chr2 (222-297)||(9766908-9766983)
chr2 (222-297)||(10273579-10273654)
chr2 (222-297)||(11399317-11399392)
chr2 (222-297)||(19306564-19306639)
chr2 (222-297)||(22937802-22937877)
chr2 (222-297)||(24805795-24805870)
chr2 (222-297)||(27228031-27228106)
chr2 (222-297)||(35259597-35259672)
chr2 (222-297)||(35270222-35270297)
chr2 (222-297)||(39174239-39174314)
chr2 (222-270)||(40247201-40247249)
[»] scaffold0682 (1 HSPs)
scaffold0682 (222-297)||(6198-6273)
[»] scaffold0273 (1 HSPs)
scaffold0273 (172-270)||(21663-21761)
[»] chr6 (17 HSPs)
chr6 (222-297)||(32966081-32966156)
chr6 (222-305)||(18828436-18828520)
chr6 (222-297)||(3668035-3668110)
chr6 (222-297)||(4637517-4637592)
chr6 (222-297)||(12720971-12721046)
chr6 (222-297)||(12861522-12861597)
chr6 (222-297)||(13919837-13919912)
chr6 (222-297)||(22382607-22382682)
chr6 (222-297)||(26032011-26032086)
chr6 (222-297)||(26040207-26040282)
chr6 (222-297)||(26871393-26871468)
chr6 (222-297)||(27348336-27348411)
chr6 (222-297)||(27409076-27409151)
chr6 (222-297)||(27500295-27500370)
chr6 (222-297)||(32305181-32305256)
chr6 (131-207)||(19956141-19956217)
chr6 (222-305)||(25681126-25681210)
[»] scaffold0193 (1 HSPs)
scaffold0193 (131-297)||(11330-11496)
[»] scaffold0382 (1 HSPs)
scaffold0382 (222-297)||(5451-5526)
[»] scaffold0133 (1 HSPs)
scaffold0133 (222-297)||(37753-37828)
[»] scaffold0105 (1 HSPs)
scaffold0105 (222-297)||(41120-41195)
[»] scaffold0453 (1 HSPs)
scaffold0453 (131-297)||(4273-4439)
[»] scaffold0185 (1 HSPs)
scaffold0185 (222-300)||(22391-22469)
[»] scaffold0863 (1 HSPs)
scaffold0863 (131-207)||(1718-1794)
[»] scaffold0827 (1 HSPs)
scaffold0827 (222-305)||(444-528)
[»] scaffold0664 (1 HSPs)
scaffold0664 (222-270)||(1719-1767)
[»] scaffold0624 (1 HSPs)
scaffold0624 (222-305)||(8963-9047)


Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 18 - 440
Target Start/End: Original strand, 15165875 - 15166311
Alignment:
Q  18 aatgtttttctaggggtgcttcagacgttgcactagcttctgaaccattagatgcaccaataaattctgaagcttgttcaaattctaaagcatcttcagt 117  Q
    |||||| ||||| | ||||||||||  ||||||||||||||||||||| | | ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  15165875 aatgttcttctatgtgtgcttcagagtttgcactagcttctgaaccatcataagcaccaataaattctaaagcttgttcagattctaaagcatcttcagt 15165974  T
Q  118 gatttaaatctgggcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagtt 217  Q
    ||| ||||||| ||||||| |||||||||||||||| |||||||||| | | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  15165975 gatctaaatctcggcaaaattttcaactagctctgatattttatttttaggttttttgtcatcaaatttgatgtgtattgattcttcaaccatgttagtt 15166074  T
Q  218 ttaaaattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattttttaga-------tactgtt 310  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || ||||    
T  15166075 ttaaaattatacactttatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattttttagatagaccttattgtt 15166174  T
Q  311 -------taacatgtacatccaaactggtgaaacgtaaacgatacttagtttctttcctttaaaagagttcacatgaagagtccatccttcgaagttttg 403  Q
           |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15166175 taagatgtaacatgtacatccaaactgatgaaaagtaaacgatacttagtttctttcctttaaaagagttcacatgaagagtccatccttagaagttttg 15166274  T
Q  404 ttcaattgccaaacataacttgtttgaacaagatact 440  Q
    |||||||||||||||||||||||||||||||||||||    
T  15166275 ttcaattgccaaacataacttgtttgaacaagatact 15166311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 18 - 440
Target Start/End: Complemental strand, 15080373 - 15079937
Alignment:
Q  18 aatgtttttctaggggtgcttcagacgttgcactagcttctgaaccattagatgcaccaataaattctgaagcttgttcaaattctaaagcatcttcagt 117  Q
    |||||| ||||| | ||||||||||  |||||||||||||||||||||   | ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  15080373 aatgttcttctatgtgtgcttcagagtttgcactagcttctgaaccatcttaagcaccaataaattctaaagcttgttcagattctaaagcatcttcagt 15080274  T
Q  118 gatttaaatctgggcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagtt 217  Q
    ||| ||||||| ||||||| ||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||||||||| |||| |||||    
T  15080273 gatctaaatctcggcaaaattttcaactagctctgacattttatttttaggttttttgtcatcaaatttgatgtgtattaattcttcaatcatgttagtt 15080174  T
Q  218 ttaaaattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattttttaga-------tactgtt 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || ||||    
T  15080173 ttaaaattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattttttagatagaccttattgtt 15080074  T
Q  311 -------taacatgtacatccaaactggtgaaacgtaaacgatacttagtttctttcctttaaaagagttcacatgaagagtccatccttcgaagttttg 403  Q
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15080073 taagatgtaacatgtaaatccaaactggtgaaacgtaaacgatacttagtttctttcctttaaaagagttcacatgaagagtccatccttagaagttttg 15079974  T
Q  404 ttcaattgccaaacataacttgtttgaacaagatact 440  Q
    |||||||| ||||||||||||||||||||||||||||    
T  15079973 ttcaattgtcaaacataacttgtttgaacaagatact 15079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 132 - 298
Target Start/End: Original strand, 24589893 - 24590059
Alignment:
Q  132 caaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattatacac 231  Q
    ||||||| |||||||||| |||||||||||| ||| ||| ||| ||||||||||| | || |||| ||||||||||  || |||| | ||||||||||||    
T  24589893 caaaactgtcaactagctttgacattttattgtcatgctctttttcatcaaattttacgtctattaattcttcaactgtgttagtctcaaaattatacac 24589992  T
Q  232 tctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaatttt 298  Q
    | | |||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24589993 tttgtatgtctttaagcgttcagagtatcctaagaagatacccttatgagctttggcatcaaatttt 24590059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 131 - 305
Target Start/End: Original strand, 18160485 - 18160660
Alignment:
Q  131 gcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaac-catgatagttttaaaattatac 229  Q
    |||||||||||||||||||||  ||||| ||| |||  |||||||||||||||||||||||| |||||||||||||| ||   | ||||   ||||||||    
T  18160485 gcaaaactttcaactagctctagcatttcattgtcagactttttgtcatcaaatttgatgtgcattgattcttcaacacactgt-gtttctgaattatac 18160583  T
Q  230 actctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||| |||||||| || | |||| |||| ||||| || || || || ||||| |||||||||||||| ||||||||    
T  18160584 actctgtatgccttggatctttcaaagtaacctaaaaacattccattctgagccttgacatcaaatttatttagata 18160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 172 - 297
Target Start/End: Complemental strand, 12563843 - 12563718
Alignment:
Q  172 tttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattatacactctatatgcctttgagcgttcagagtatcctaagaagata 271  Q
    |||||||||||||||||||||||||  |||||||||  |  || |||||||||||||| || | |||||| | ||||||||| ||||| | || |||||     
T  12563843 tttgtcatcaaatttgatgtgtattagttcttcaactgtattaattttaaaattatacgctatgtatgccatagagcgttcaaagtattccaataagatg 12563744  T
Q  272 cccttatgagctttgacatcaaattt 297  Q
    | ||| ||||||||||||||||||||    
T  12563743 cacttttgagctttgacatcaaattt 12563718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 811547 - 811622
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||||||||||||||    
T  811547 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttgacatcaaattt 811622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 22150981 - 22150897
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  22150981 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagata 22150897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 23801326 - 23801410
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  23801326 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagata 23801410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 248446 - 248521
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  248446 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 248521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 3352870 - 3352795
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  3352870 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 3352795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 6157704 - 6157779
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  6157704 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 6157779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 9347736 - 9347811
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  9347736 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 9347811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 13692805 - 13692730
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  13692805 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 13692730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 15784945 - 15784870
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| || |||||||| | ||||||||| ||||| ||||| ||  | ||||| ||||||||||||||    
T  15784945 aattatacactctgtacgcctttgacctttcagagtaacctaaaaagattcctctttgagccttgacatcaaattt 15784870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 26116945 - 26117020
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| || |||||||| | ||||||||| ||||| ||||| ||  | ||||| ||||||||||||||    
T  26116945 aattatacactctgtacgcctttgacctttcagagtaacctaaaaagattcctctttgagccttgacatcaaattt 26117020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 29083029 - 29083104
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  29083029 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 29083104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 36084559 - 36084634
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  36084559 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 36084634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 36299564 - 36299639
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  36299564 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 36299639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 44487752 - 44487827
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  44487752 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 44487827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 17292853 - 17292805
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagat 270  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| |||||    
T  17292853 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagat 17292805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 21294908 - 21294956
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagat 270  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| |||||    
T  21294908 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagat 21294956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 22465517 - 22465441
Alignment:
Q  131 gcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaac 207  Q
    |||||||||||| || |||||||  ||| |||| || ||| ||| ||||||||||| | ||| ||||||||||||||    
T  22465517 gcaaaactttcaccttgctctgaagtttcatttccaggctctttttcatcaaatttaacgtgcattgattcttcaac 22465441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 175 - 305
Target Start/End: Complemental strand, 34523264 - 34523133
Alignment:
Q  175 gtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattatacactctatatgcctttgagcgttcagagtatcctaagaagataccc 274  Q
    |||||| ||||||||||||||| |||||| ||| ||| |||||| ||||||||||||||| ||| |||||||| ||||| |||||||||||| |||||||    
T  34523264 gtcatccaatttgatgtgtattaattctttaacaatgttagtttcaaaattatacactctgtatacctttgagtgttcaaagtatcctaagatgataccc 34523165  T
Q  275 ttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||| |||| |||||||||| ||||||||    
T  34523164 ttatgagatttggcatcaaatttctttagata 34523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 19163915 - 19163840
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||||||||||||||    
T  19163915 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagcattgacatcaaattt 19163840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 22651287 - 22651371
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  22651287 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagata 22651371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 3178180 - 3178255
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  3178180 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 3178255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 5839783 - 5839858
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  5839783 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 5839858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 7513853 - 7513928
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  7513853 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 7513928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 261
Target Start/End: Complemental strand, 9331244 - 9331117
Alignment:
Q  134 aaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattatacactc 233  Q
    ||||| || |||||||| |||||||  || | | ||| ||| |||||||||||  |||||||||||||||  || ||  |||||| | |||||||||||     
T  9331244 aaactatccactagctccgacatttgtttgttaggctctttatcatcaaatttattgtgtattgattctttcactatattagtttgagaattatacactt 9331145  T
Q  234 tatatgcctttgagcgttcagagtatcc 261  Q
    | ||||||||||| | ||| ||||||||    
T  9331144 tgtatgcctttgatcattctgagtatcc 9331117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 12737107 - 12737182
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||| ||||| ||||| ||||| ||  | ||||| ||||||||||||||    
T  12737107 aattatacactctgtatgcctttgacctttctgagtaacctaaaaagattcctctttgagccttgacatcaaattt 12737182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 21870242 - 21870317
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  21870242 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 21870317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 35642283 - 35642208
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  35642283 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 35642208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 38101664 - 38101739
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  38101664 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 38101739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 47612178 - 47612103
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  47612178 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 47612103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 305
Target Start/End: Complemental strand, 23977937 - 23977764
Alignment:
Q  132 caaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattatacac 231  Q
    ||||| |||||||||||||||  |||| | || || | | |||||||||||| || ||||| ||||||||||||||  |  | |||||  ||| ||||||    
T  23977937 caaaaatttcaactagctctggaatttcacttccaggatctttgtcatcaaa-ttaatgtgcattgattcttcaacactttttgtttttgaatgatacac 23977839  T
Q  232 tctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||| ||| |||| || | ||||||||| ||||| ||||| |   | ||||| |||||||||||||| ||||||||    
T  23977838 tctgtattccttagatctttcagagtaacctaaaaagattcttctttgagccttgacatcaaatttctttagata 23977764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 137 - 305
Target Start/End: Original strand, 18008806 - 18008975
Alignment:
Q  137 ctttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattatacactctat 236  Q
    |||||||||||||||||||||||||| |||  ||||| ||||||||| ||||||||||||||||||||||   |  |||||||| ||||||||||| ||     
T  18008806 ctttcaactagctctgacattttattatcagacttttggtcatcaaaattgatgtgtattgattcttcaattgtattagttttagaattatacactatac 18008905  T
Q  237 atgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    |||| |||||||| ||  | |||||||| ||||| || || | |||||||||||||||||| ||||||||    
T  18008906 atgcttttgagcgctcgaaatatcctaaaaagattccattctaagctttgacatcaaatttctttagata 18008975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 21670175 - 21670091
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  21670175 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagata 21670091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 9340278 - 9340203
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  9340278 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 9340203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 14034365 - 14034290
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  14034365 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 14034290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 14453550 - 14453625
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  14453550 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 14453625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 14564591 - 14564666
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  14564591 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 14564666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 15999834 - 15999909
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  15999834 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 15999909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 17611385 - 17611310
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  17611385 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 17611310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 17723241 - 17723166
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  17723241 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 17723166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 22150839 - 22150764
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  22150839 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 22150764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 22680439 - 22680364
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  22680439 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 22680364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 23300600 - 23300525
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  23300600 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 23300525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 23366259 - 23366184
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  23366259 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 23366184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 23400234 - 23400159
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| || |||||||| | ||||||||| ||||| ||||| ||  | ||||| ||||||||||||||    
T  23400234 aattatacactctgtacgcctttgacctttcagagtaacctaaaaagattcctctttgagccttgacatcaaattt 23400159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 23701103 - 23701028
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  23701103 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 23701028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 24571395 - 24571320
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  24571395 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 24571320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 24812236 - 24812161
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  24812236 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 24812161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 24823414 - 24823489
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  24823414 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 24823489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 27048775 - 27048850
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  27048775 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 27048850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 27464485 - 27464410
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  27464485 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 27464410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 30233964 - 30234039
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  30233964 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 30234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 31352857 - 31352782
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  31352857 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 31352782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 31837803 - 31837728
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  31837803 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 31837728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 34056256 - 34056181
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| || |||||||| | ||||||||||||||| ||||| ||  | ||||| ||| ||||||||||    
T  34056256 aattatacactctgtacgcctttgacctttcagagtatcctaaaaagattcctctttgagccttggcatcaaattt 34056181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 35219826 - 35219751
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  35219826 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 35219751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 36589055 - 36589130
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  36589055 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 36589130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 36692021 - 36691946
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  36692021 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 36691946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 37736505 - 37736580
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  37736505 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 37736580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 39497425 - 39497500
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  39497425 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 39497500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 42047103 - 42047028
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  42047103 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 42047028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 31444214 - 31444136
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaatttttt 300  Q
    ||||||||||||| |||| |||||| | |||| |||| ||||| ||||| ||  ||||||| ||| |||||||||||||    
T  31444214 aattatacactctgtatgtctttgacctttcaaagtaacctaaaaagattcctctatgagccttggcatcaaatttttt 31444136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 5297080 - 5297164
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||||| || |||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  5297080 aattatacactctgtacgcctttgacctttcagagtaacctaaaaagattcctctttgagcattggcatcaaatttctttagata 5297164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 246
Target Start/End: Original strand, 11534940 - 11535053
Alignment:
Q  133 aaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattatacact 232  Q
    ||||||||||||||||| ||| |||||||| ||| ||| |||||||| |||||||||||| ||| ||| ||| || | | |||||| |||||||||||||    
T  11534940 aaaactttcaactagctttgaaattttattgtcatgctctttgtcattaaatttgatgtgcattaattattccactaagttagtttcaaaattatacact 11535039  T
Q  233 ctatatgcctttga 246  Q
     | |||| ||||||    
T  11535040 ttgtatgtctttga 11535053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 11452546 - 11452432
Alignment:
Q  133 aaaactttc-aactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattatacac 231  Q
    ||||||||| |||||||| ||| |||||||| ||| ||| |||||||| |||||||||||| ||||||| ||| || | | |||||| ||||||||||||    
T  11452546 aaaactttctaactagctttgaaattttattgtcatgctctttgtcattaaatttgatgtgcattgattattccactaagttagtttcaaaattatacac 11452447  T
Q  232 tctatatgcctttga 246  Q
    | | |||| ||||||    
T  11452446 tttgtatgtctttga 11452432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 457214 - 457288
Alignment:
Q  223 attatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    |||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||||||||||||||    
T  457214 attatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttgacatcaaattt 457288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 4991999 - 4991924
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  4991999 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 4991924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 5018788 - 5018863
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  5018788 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 5018863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 10297322 - 10297397
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  10297322 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 10297397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 10744802 - 10744727
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  10744802 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 10744727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 10958571 - 10958496
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  10958571 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 10958496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 16262516 - 16262591
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  16262516 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 16262591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 18756694 - 18756619
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  18756694 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 18756619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 19948599 - 19948524
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| || |||||||| | ||||||||| ||||| ||||| ||  | ||||| ||||||||||||||    
T  19948599 aattatacactctgtacgcctttgacctttcagagtaacctaaaaagattcctctttgagccttgacatcaaattt 19948524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 22003068 - 22003143
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  22003068 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 22003143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 24646982 - 24647057
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  24646982 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 24647057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 27663263 - 27663338
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  27663263 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 27663338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 30930697 - 30930622
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  30930697 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 30930622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 36024942 - 36025017
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  36024942 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 36025017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 43250111 - 43250186
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  43250111 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 43250186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 55749456 - 55749381
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  55749456 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 55749381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 39530387 - 39530303
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    |||| |||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  39530387 aattttacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagata 39530303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 49514187 - 49514235
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagat 270  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| |||||    
T  49514187 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagat 49514235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 7e-16; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 305
Target Start/End: Original strand, 24830782 - 24830904
Alignment:
Q  183 atttgatgtgtattgattcttcaaccatgatagttttaaaattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagc 282  Q
    |||||||||||||| |||||||||   |  |||||||| ||||||| ||||| ||| ||||||||| || |||||||||||| |||||||  ||||||||    
T  24830782 atttgatgtgtatt-attcttcaattgtattagttttataattatatactctgtatacctttgagcatttagagtatcctaaaaagatacatttatgagc 24830880  T
Q  283 tttgacatcaaattt-tttagata 305  Q
    ||||| ||||| ||| ||||||||    
T  24830881 tttgatatcaagtttctttagata 24830904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 5301376 - 5301287
Alignment:
Q  217 tttaaaattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    |||||||||||||||| | |||  |||||||| |||| |||||||||| || ||||| || |||||||||||||||||||| ||||||||    
T  5301376 tttaaaattatacactttgtatatctttgagcattcaaagtatcctaataaaataccgttctgagctttgacatcaaatttctttagata 5301287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 13662990 - 13663091
Alignment:
Q  169 ctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattatacactctatatgcctttgagcgttcagagtatcctaagaag 268  Q
    |||||||||||||||||| | ||| ||||||||||||||   ||  || |  |||||||||||||| ||||||||||| | ||||||||| ||||| |||    
T  13662990 ctttttgtcatcaaatttaacgtgcattgattcttcaacacagagtgtctctaaattatacactctgtatgcctttgacctttcagagtaacctaaaaag 13663089  T
Q  269 at 270  Q
    ||    
T  13663090 at 13663091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 16157524 - 16157448
Alignment:
Q  131 gcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaac 207  Q
    |||||| |||||||||||||||  |||| | || ||||||  |||||| |||||||||| || ||||||||||||||    
T  16157524 gcaaaaatttcaactagctctggaatttcacttccaagctccttgtcaccaaatttgatatgcattgattcttcaac 16157448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 461270 - 461195
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  461270 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 461195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 1994175 - 1994250
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  1994175 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 1994250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 2709897 - 2709822
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  2709897 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 2709822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 4218627 - 4218702
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  4218627 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 4218702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 8006350 - 8006275
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  8006350 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 8006275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 8623964 - 8624039
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  8623964 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 8624039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 9091853 - 9091928
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| || || ||  | ||||| ||||||||||||||    
T  9091853 aattatacactctgtatgcctttgacctttcagagtaacctaaaaatattcctctttgagccttgacatcaaattt 9091928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 11011806 - 11011881
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  11011806 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 11011881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 17954398 - 17954323
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  17954398 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 17954323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 20985876 - 20985951
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    |||||||||||||||| |||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  20985876 aattatacactctatacgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 20985951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 22095760 - 22095835
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  22095760 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 22095835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 24740720 - 24740795
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  24740720 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 24740795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 25205513 - 25205438
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| || |||||||| | ||||||||| ||||| ||||| ||  | ||||||||| ||||||||||    
T  25205513 aattatacactctgtacgcctttgatctttcagagtaacctaaaaagattcctctttgagctttgtcatcaaattt 25205438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 26394378 - 26394303
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  26394378 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 26394303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 26657619 - 26657544
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  26657619 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 26657544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 40046388 - 40046313
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  40046388 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 40046313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 42872467 - 42872542
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  42872467 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 42872542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 10653208 - 10653256
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagat 270  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| |||||    
T  10653208 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagat 10653256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 18435106 - 18435190
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||| | ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  18435106 aattatacactttgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagata 18435190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 1013 - 1087
Alignment:
Q  133 aaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaac 207  Q
    ||||||||||||||||||||  |||||| ||  | |||| |||||||||||||||||||| ||||||||||||||    
T  1013 aaaactttcaactagctctggaattttacttctaggcttcttgtcatcaaatttgatgtgaattgattcttcaac 1087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 297
Target Start/End: Original strand, 4613 - 4779
Alignment:
Q  131 gcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattataca 230  Q
    |||||||||||| || ||||||   ||| | || || ||| ||||||||||||||| | ||| ||||||||||||||   ||  || |   |||||||||    
T  4613 gcaaaactttcatcttgctctggagtttcacttccaggctctttgtcatcaaatttaacgtgcattgattcttcaacacagagtgtctctgaattataca 4712  T
Q  231 ctctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    || | ||||||||||| | ||||||||| ||||||||||| ||||| || || ||| ||||||||||    
T  4713 ctttgtatgcctttgacctttcagagtaacctaagaagatccccttttgggccttggcatcaaattt 4779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 297
Target Start/End: Complemental strand, 6143 - 5977
Alignment:
Q  131 gcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattataca 230  Q
    |||||||||||| || ||||||   ||| | || || ||| ||||||||||||||| | ||| ||||||||||||||   ||  || |   |||||||||    
T  6143 gcaaaactttcatcttgctctggagtttcacttccaggctctttgtcatcaaatttaacgtgcattgattcttcaacacagagtgtctctgaattataca 6044  T
Q  231 ctctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    || | ||||||||||| | ||||||||| ||||||||||| ||||| || || ||| ||||||||||    
T  6043 ctttgtatgcctttgacctttcagagtaacctaagaagatccccttttgggccttggcatcaaattt 5977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 297
Target Start/End: Original strand, 11770 - 11936
Alignment:
Q  131 gcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattataca 230  Q
    |||||||||||| || ||||||   ||| | || || ||| ||||||||||||||| | ||| ||||||||||||||   ||  || |   |||||||||    
T  11770 gcaaaactttcatcttgctctggagtttcacttccaggctctttgtcatcaaatttaacgtgcattgattcttcaacacagagtgtctctgaattataca 11869  T
Q  231 ctctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    || | ||||||||||| | ||||||||| ||||||||||| ||||| || || ||| ||||||||||    
T  11870 ctttgtatgcctttgacctttcagagtaacctaagaagatccccttttgggccttggcatcaaattt 11936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 263
Target Start/End: Complemental strand, 18702882 - 18702750
Alignment:
Q  131 gcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaac-catgatagttttaaaattatac 229  Q
    |||||||||| ||||||||| |  |||| | || || ||| ||||||||||||||||||||| |||||||||||||| |||  | ||||   ||||||||    
T  18702882 gcaaaactttgaactagctccgtaatttcacttccaggctctttgtcatcaaatttgatgtgcattgattcttcaacacattgt-gtttctgaattatac 18702784  T
Q  230 actctatatgcctttgagcgttcagagtatccta 263  Q
    ||| | ||||||||||| | ||||||||| ||||    
T  18702783 actttgtatgcctttgacctttcagagtaaccta 18702750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 13145771 - 13145846
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||||||||||||||    
T  13145771 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttgacatcaaattt 13145846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 13376867 - 13376792
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||||||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  13376867 aattatacactctatatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 13376792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 13387461 - 13387386
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||||||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  13387461 aattatacactctatatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 13387386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 1060181 - 1060265
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  1060181 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagata 1060265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 15655241 - 15655157
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  15655241 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagata 15655157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 508370 - 508295
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  508370 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 508295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 4429797 - 4429872
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| || |||||||| | ||||||||| ||||| ||||| ||  | ||||||||| ||||||||||    
T  4429797 aattatacactctgtacgcctttgacctttcagagtaacctaaaaagattcctctttgagctttggcatcaaattt 4429872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 4750356 - 4750431
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  4750356 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 4750431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 5541221 - 5541146
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  5541221 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 5541146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 5583833 - 5583758
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  5583833 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 5583758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 5869896 - 5869821
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  5869896 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 5869821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 8781300 - 8781375
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  8781300 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 8781375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 8999989 - 8999898
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagatactgttta 312  Q
    ||||||||||||| ||||| ||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| |||||||| ||||||    
T  8999989 aattatacactctgtatgcatttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagatagtgttta 8999898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 10631023 - 10630948
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  10631023 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 10630948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 11276585 - 11276510
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  11276585 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 11276510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 13128310 - 13128385
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  13128310 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 13128385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 13265858 - 13265783
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    |||||||||| || ||||||||||| | ||||||||| ||||| ||||| || || ||||| ||| ||||||||||    
T  13265858 aattatacaccctgtatgcctttgacctttcagagtaacctaaaaagattcctttttgagccttggcatcaaattt 13265783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 15839859 - 15839934
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  15839859 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 15839934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 16395247 - 16395172
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  16395247 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 16395172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 17249010 - 17248935
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||| | |||| |||||| | ||||||||| ||||||||||| ||||| || || ||| ||||||||||    
T  17249010 aattatacactttgtatgtctttgacctttcagagtaacctaagaagattcccttttgggccttggcatcaaattt 17248935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 19785059 - 19785134
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    |||||||||||||||| |||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  19785059 aattatacactctatacgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 19785134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 20677397 - 20677322
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  20677397 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 20677322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 23763931 - 23764006
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  23763931 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 23764006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 24387718 - 24387643
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  24387718 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 24387643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 24666507 - 24666582
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  24666507 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 24666582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 28318438 - 28318363
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  28318438 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 28318363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 38201289 - 38201364
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  38201289 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 38201364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 39378721 - 39378796
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  39378721 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 39378796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 41690286 - 41690361
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  41690286 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 41690361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 17013822 - 17013896
Alignment:
Q  223 attatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    |||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  17013822 attatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 17013896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 6494544 - 6494496
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagat 270  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| |||||    
T  6494544 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagat 6494496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 29937754 - 29937670
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||| | ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  29937754 aattatacactttgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagata 29937670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 29986908 - 29986824
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||| | ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  29986908 aattatacactttgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagata 29986824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 22745646 - 22745562
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| || || ||||| ||| |||||||||| ||||||||    
T  22745646 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctttttgagccttggcatcaaatttctttagata 22745562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 9901793 - 9901718
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||||||| ||||||||||    
T  9901793 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagctttggcatcaaattt 9901718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 319
Target Start/End: Original strand, 43351995 - 43352093
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagatactgtttaacatgta 319  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| || ||||| ||||||| |||||    
T  43351995 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttcttcagatagtgtttaagatgta 43352093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 4216488 - 4216563
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  4216488 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 4216563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 9766983 - 9766908
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  9766983 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 9766908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 10273579 - 10273654
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  10273579 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 10273654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 11399392 - 11399317
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  11399392 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 11399317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 19306639 - 19306564
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  19306639 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 19306564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 22937877 - 22937802
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  22937877 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 22937802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 24805870 - 24805795
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  24805870 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 24805795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 27228031 - 27228106
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  27228031 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 27228106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 35259597 - 35259672
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  35259597 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 35259672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 35270222 - 35270297
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  35270222 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 35270297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 39174314 - 39174239
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  39174314 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 39174239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 40247201 - 40247249
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagat 270  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| |||||    
T  40247201 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagat 40247249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 6273 - 6198
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||||||| ||||||||||    
T  6273 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagctttggcatcaaattt 6198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 21663 - 21761
Alignment:
Q  172 tttgtcatcaaatttgatgtgtattgattcttcaac-catgatagttttaaaattatacactctatatgcctttgagcgttcagagtatcctaagaagat 270  Q
    ||||||||||||||||||||| |||||||||||||| ||| |  |||||  |||| |||||||| ||||||||||| | || |||||| ||||| |||||    
T  21663 tttgtcatcaaatttgatgtgcattgattcttcaacacat-agtgtttttgaattgtacactctgtatgcctttgaccttttagagtaacctaaaaagat 21761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 32966156 - 32966081
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| || || ||||| ||| ||||||||||    
T  32966156 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctttttgagccttggcatcaaattt 32966081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 18828520 - 18828436
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  18828520 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagata 18828436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 3668035 - 3668110
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  3668035 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 3668110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 4637517 - 4637592
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  4637517 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 4637592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 12721046 - 12720971
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  12721046 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 12720971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 12861522 - 12861597
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  12861522 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 12861597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 13919837 - 13919912
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  13919837 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 13919912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 22382607 - 22382682
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    |||||| |||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||||||||||||||    
T  22382607 aattatgcactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttgacatcaaattt 22382682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 26032011 - 26032086
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  26032011 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 26032086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 26040207 - 26040282
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  26040207 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 26040282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 26871393 - 26871468
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  26871393 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 26871468  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 27348336 - 27348411
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  27348336 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 27348411  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 27409076 - 27409151
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  27409076 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 27409151  T

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Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 27500295 - 27500370
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  27500295 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 27500370  T

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Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 32305256 - 32305181
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  32305256 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 32305181  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 19956217 - 19956141
Alignment:
Q  131 gcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaac 207  Q
    |||||||||||| || ||||||   ||| | || || ||| ||||||||||||||| ||||| ||||||||||||||    
T  19956217 gcaaaactttcatcttgctctggagtttcacttccaggctctttgtcatcaaattttatgtgcattgattcttcaac 19956141  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 25681210 - 25681126
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||||| || |||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| |||||||||| ||||||||    
T  25681210 aattatacactctgtaagcctttgatctttcagagtaacctaaaaagattcctctttgagccttggcatcaaatttctttagata 25681126  T

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Target: scaffold0193 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 297
Target Start/End: Original strand, 11330 - 11496
Alignment:
Q  131 gcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattataca 230  Q
    |||||||||||| || |||||||  ||| ||||  | ||| ||||||||||||||| | ||| ||||||||||||||    |  || |  ||||||||||    
T  11330 gcaaaactttcatcttgctctgaagtttcatttctaggctctttgtcatcaaatttaacgtgcattgattcttcaacacaaagtgtctctaaattataca 11429  T
Q  231 ctctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    || | |||| |||||| | ||||||||| ||||| ||||| ||||| || || ||| ||||||||||    
T  11430 ctttgtatgtctttgacctttcagagtaacctaaaaagattcccttttgggccttggcatcaaattt 11496  T

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Target: scaffold0382 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 5526 - 5451
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  5526 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 5451  T

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Target: scaffold0133 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 37753 - 37828
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  37753 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 37828  T

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Target: scaffold0105 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 41195 - 41120
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||| ||||||||||    
T  41195 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttggcatcaaattt 41120  T

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Target: scaffold0453 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 297
Target Start/End: Original strand, 4273 - 4439
Alignment:
Q  131 gcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaaccatgatagttttaaaattataca 230  Q
    |||||||||||| || |||||||  ||| | || ||  || ||||||||||||||| ||||| ||||||||||||||   ||  || |   |||||||||    
T  4273 gcaaaactttcatcttgctctgaagtttcacttccagactctttgtcatcaaatttaatgtgcattgattcttcaacacagagtgtctctgaattataca 4372  T
Q  231 ctctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt 297  Q
    || | ||||||||||| | |||||||||  |||| ||||| ||  | || || ||||||||||||||    
T  4373 ctttgtatgcctttgacctttcagagtaaactaaaaagattcctctttgggccttgacatcaaattt 4439  T

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Target: scaffold0185 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 22391 - 22469
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaatttttt 300  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| ||||| ||  | ||||| ||  |||||||||||||    
T  22391 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagattcctctttgagccttagcatcaaatttttt 22469  T

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Target: scaffold0863 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 1794 - 1718
Alignment:
Q  131 gcaaaactttcaactagctctgacattttattttcaagctttttgtcatcaaatttgatgtgtattgattcttcaac 207  Q
    |||||||||||| || ||||||   |||||||| || ||| ||||||||||||||| || ||  |||||||||||||    
T  1794 gcaaaactttcatcttgctctggagttttatttccaggctctttgtcatcaaatttaatctgcgttgattcttcaac 1718  T

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Target: scaffold0827 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 444 - 528
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||||||| | ||||||||||| | |||| |||| ||||| ||||| ||  | ||||||||| |||||||||| ||||||||    
T  444 aattatacactttgtatgcctttgacctttcaaagtaacctaaaaagattcctctttgagctttggcatcaaatttctttagata 528  T

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Target: scaffold0664 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 1719 - 1767
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagat 270  Q
    ||||||||||||| ||||||||||| | ||||||||| ||||| |||||    
T  1719 aattatacactctgtatgcctttgacctttcagagtaacctaaaaagat 1767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0624 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0624
Description:

Target: scaffold0624; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 9047 - 8963
Alignment:
Q  222 aattatacactctatatgcctttgagcgttcagagtatcctaagaagatacccttatgagctttgacatcaaattt-tttagata 305  Q
    ||||||| ||||| ||||||||||| | |||||||||  |||| ||||| ||  | ||||| |||||||||||||| ||||||||    
T  9047 aattatatactctgtatgcctttgacctttcagagtaatctaaaaagattcctctttgagccttgacatcaaatttctttagata 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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