View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13787_high_14 (Length: 291)
Name: NF13787_high_14
Description: NF13787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13787_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 8 - 269
Target Start/End: Original strand, 23909291 - 23909552
Alignment:
| Q |
8 |
cgaagaatatattgtaggaacttaatgaatatatttataataaatatatgacaagagacaaaataaagagaggtcaatctcgtatgttgaaagatgatac |
107 |
Q |
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| T |
23909291 |
cgaataatatattgtaggaacttaatgaatatatttataataaatatatgacaagagacaaaataaagagaggtcaatctcgtatgttgaaagatgatac |
23909390 |
T |
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| Q |
108 |
cacaagcagcaagactaagggaacccttcgttgcaccatatgttctacacttaattcatctacaagcaagttgactgctataaccaaataaacttggaat |
207 |
Q |
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| T |
23909391 |
cacaagcagcaagactaagggaacccttcgttgcaccatatgttctacatttaattcatctacaagcaagttgactgctataaccaaataaacttggaat |
23909490 |
T |
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| Q |
208 |
ttgtaacacctaaacgtatcgctggaaaattaacaaaaactattttttcttaggatggaaac |
269 |
Q |
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| T |
23909491 |
ttgtaacacctaaacgtatcgctggaaaattaacaaaaattattttttcttaagatggaaac |
23909552 |
T |
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