View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13787_high_3 (Length: 829)

Name: NF13787_high_3
Description: NF13787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13787_high_3
NF13787_high_3
[»] chr5 (36 HSPs)
chr5 (17-738)||(36330378-36331074)
chr5 (224-679)||(36334936-36335391)
chr5 (388-566)||(35432427-35432606)
chr5 (737-818)||(36332776-36332857)
chr5 (664-815)||(34406011-34406163)
chr5 (411-576)||(1810360-1810525)
chr5 (41-223)||(2500291-2500469)
chr5 (482-717)||(2499792-2500027)
chr5 (109-198)||(26337702-26337791)
chr5 (17-223)||(33321207-33321408)
chr5 (109-198)||(33920861-33920950)
chr5 (387-573)||(26337984-26338174)
chr5 (688-815)||(26548381-26548510)
chr5 (735-815)||(28565629-28565709)
chr5 (404-573)||(9690781-9690953)
chr5 (404-534)||(33320891-33321024)
chr5 (656-718)||(7649970-7650032)
chr5 (746-815)||(2453642-2453711)
chr5 (750-815)||(18016619-18016684)
chr5 (434-573)||(33921149-33921292)
chr5 (735-799)||(19686520-19686584)
chr5 (664-718)||(14616457-14616511)
chr5 (388-470)||(34652789-34652871)
chr5 (404-449)||(4731886-4731931)
chr5 (650-718)||(1810219-1810287)
chr5 (665-744)||(21680640-21680719)
chr5 (404-470)||(2453301-2453367)
chr5 (404-470)||(3195112-3195178)
chr5 (667-760)||(11988848-11988941)
chr5 (688-785)||(15542343-15542440)
chr5 (404-470)||(19686188-19686254)
chr5 (741-815)||(22036208-22036282)
chr5 (404-470)||(28562393-28562459)
chr5 (404-470)||(28565961-28566027)
chr5 (746-815)||(30761767-30761836)
chr5 (665-718)||(33921378-33921431)
[»] chr3 (36 HSPs)
chr3 (129-578)||(26822184-26822625)
chr3 (108-464)||(11270779-11271135)
chr3 (647-815)||(26821970-26822138)
chr3 (404-576)||(19869001-19869173)
chr3 (109-529)||(46542067-46542473)
chr3 (109-223)||(3305569-3305685)
chr3 (41-223)||(27054528-27054706)
chr3 (109-223)||(28327163-28327279)
chr3 (109-223)||(28330488-28330604)
chr3 (226-354)||(18551509-18551637)
chr3 (201-331)||(26551413-26551543)
chr3 (109-198)||(4250105-4250194)
chr3 (388-573)||(28327446-28327635)
chr3 (388-573)||(28330771-28330960)
chr3 (735-815)||(10960243-10960323)
chr3 (388-573)||(4250388-4250577)
chr3 (735-815)||(10963750-10963830)
chr3 (741-815)||(2775930-2776004)
chr3 (749-815)||(9155178-9155244)
chr3 (388-470)||(10966919-10967001)
chr3 (404-470)||(25888502-25888568)
chr3 (741-815)||(28327801-28327875)
chr3 (741-802)||(2779172-2779233)
chr3 (388-449)||(10959903-10959964)
chr3 (388-449)||(10963410-10963471)
chr3 (404-566)||(27054889-27055056)
chr3 (665-718)||(27055155-27055208)
chr3 (665-721)||(19869261-19869317)
chr3 (734-785)||(20536294-20536345)
chr3 (404-451)||(20536636-20536683)
chr3 (404-470)||(2784140-2784206)
chr3 (404-470)||(4225885-4225951)
chr3 (741-815)||(17531339-17531413)
chr3 (388-470)||(18551671-18551753)
chr3 (741-815)||(19304376-19304450)
chr3 (404-465)||(36036994-36037055)
[»] chr7 (44 HSPs)
chr7 (112-573)||(28577847-28578309)
chr7 (146-475)||(17601445-17601773)
chr7 (404-573)||(3541096-3541268)
chr7 (198-354)||(26075763-26075920)
chr7 (198-354)||(26099550-26099707)
chr7 (386-543)||(26808691-26808848)
chr7 (233-491)||(42858846-42859094)
chr7 (404-718)||(38431411-38431728)
chr7 (109-223)||(44018075-44018191)
chr7 (404-718)||(6964305-6964622)
chr7 (41-223)||(6963944-6964122)
chr7 (664-815)||(17866284-17866436)
chr7 (107-198)||(12803574-12803665)
chr7 (107-223)||(38431110-38431228)
chr7 (107-223)||(43548910-43549028)
chr7 (107-180)||(26152868-26152941)
chr7 (404-573)||(26153169-26153342)
chr7 (404-568)||(16547021-16547189)
chr7 (404-568)||(16618473-16618641)
chr7 (387-470)||(22083477-22083560)
chr7 (404-573)||(44017719-44017892)
chr7 (22-82)||(28578318-28578378)
chr7 (388-470)||(5826742-5826824)
chr7 (664-718)||(6967310-6967364)
chr7 (688-815)||(22232326-22232455)
chr7 (688-815)||(22254284-22254413)
chr7 (429-496)||(21534929-21534996)
chr7 (736-815)||(37415099-37415178)
chr7 (388-447)||(43549195-43549254)
chr7 (741-815)||(1636623-1636697)
chr7 (109-198)||(3541478-3541565)
chr7 (741-815)||(4543145-4543219)
chr7 (741-815)||(4861428-4861502)
chr7 (404-470)||(8257906-8257972)
chr7 (664-718)||(17857909-17857963)
chr7 (741-815)||(22083125-22083199)
chr7 (404-470)||(23467202-23467268)
chr7 (664-718)||(24783572-24783626)
chr7 (404-470)||(26182320-26182386)
chr7 (651-717)||(36842966-36843032)
chr7 (741-815)||(45290180-45290254)
chr7 (404-449)||(20100662-20100707)
chr7 (198-279)||(21535147-21535228)
chr7 (289-354)||(23775784-23775849)
[»] chr2 (18 HSPs)
chr2 (111-576)||(40138846-40139312)
chr2 (110-538)||(24385132-24385560)
chr2 (216-495)||(32074410-32074682)
chr2 (109-223)||(40678055-40678171)
chr2 (107-728)||(38315819-38316448)
chr2 (656-718)||(23673373-23673435)
chr2 (388-470)||(30719777-30719859)
chr2 (665-718)||(29436031-29436084)
chr2 (388-470)||(29435753-29435835)
chr2 (404-450)||(38326319-38326365)
chr2 (651-718)||(32575713-32575780)
chr2 (388-470)||(1506671-1506753)
chr2 (404-470)||(4577843-4577909)
chr2 (404-470)||(11056360-11056426)
chr2 (741-815)||(24235433-24235507)
chr2 (665-815)||(32074086-32074239)
chr2 (741-815)||(35077266-35077340)
chr2 (664-718)||(36327089-36327143)
[»] chr4 (25 HSPs)
chr4 (437-718)||(21217363-21217635)
chr4 (37-578)||(26703413-26703956)
chr4 (611-718)||(2210868-2210974)
chr4 (109-223)||(13978853-13978969)
chr4 (109-223)||(15850892-15851008)
chr4 (109-223)||(19928623-19928739)
chr4 (664-815)||(647134-647286)
chr4 (664-815)||(650406-650558)
chr4 (404-573)||(19928898-19929072)
chr4 (404-573)||(13979152-13979324)
chr4 (656-802)||(26062634-26062782)
chr4 (109-198)||(56089624-56089713)
chr4 (746-815)||(7394553-7394622)
chr4 (388-718)||(15851175-15851509)
chr4 (735-815)||(5670917-5670997)
chr4 (404-470)||(10247834-10247900)
chr4 (293-354)||(11560721-11560782)
chr4 (404-445)||(11560832-11560873)
chr4 (388-449)||(23653277-23653338)
chr4 (747-815)||(15445050-15445118)
chr4 (403-449)||(17670330-17670376)
chr4 (404-470)||(18859797-18859863)
chr4 (741-815)||(19864090-19864164)
chr4 (668-718)||(33400104-33400154)
chr4 (386-492)||(39050584-39050690)
[»] chr8 (20 HSPs)
chr8 (175-575)||(31468053-31468450)
chr8 (404-799)||(39659659-39660057)
chr8 (107-223)||(39660240-39660358)
chr8 (109-357)||(14627167-14627414)
chr8 (107-223)||(13331806-13331924)
chr8 (107-223)||(9466845-9466963)
chr8 (521-638)||(14627484-14627598)
chr8 (388-578)||(13332091-13332284)
chr8 (388-470)||(27863588-27863670)
chr8 (659-815)||(12575231-12575387)
chr8 (741-815)||(22173631-22173705)
chr8 (741-791)||(31981704-31981754)
chr8 (109-198)||(5827746-5827835)
chr8 (404-470)||(5964275-5964341)
chr8 (668-718)||(9467350-9467400)
chr8 (741-815)||(12583370-12583444)
chr8 (404-470)||(14188020-14188086)
chr8 (404-470)||(22654281-22654347)
chr8 (665-718)||(453869-453922)
chr8 (700-785)||(24435338-24435423)
[»] chr1 (26 HSPs)
chr1 (109-573)||(33898045-33898516)
chr1 (665-816)||(49716653-49716805)
chr1 (664-815)||(13493425-13493577)
chr1 (107-223)||(18392110-18392228)
chr1 (107-210)||(34552980-34553085)
chr1 (109-223)||(23441567-23441683)
chr1 (17-197)||(50197227-50197400)
chr1 (404-744)||(34552440-34552784)
chr1 (404-573)||(50196886-50197059)
chr1 (107-210)||(6195535-6195640)
chr1 (404-718)||(18392410-18392728)
chr1 (746-815)||(22456419-22456488)
chr1 (650-717)||(6206149-6206216)
chr1 (207-318)||(13795189-13795300)
chr1 (43-199)||(3088040-3088189)
chr1 (665-718)||(49720135-49720188)
chr1 (664-718)||(10765082-10765136)
chr1 (664-718)||(13496150-13496204)
chr1 (388-470)||(49719857-49719939)
chr1 (388-449)||(28918377-28918438)
chr1 (388-449)||(49716375-49716436)
chr1 (404-475)||(3087754-3087825)
chr1 (411-505)||(5317847-5317941)
chr1 (404-470)||(17902822-17902888)
chr1 (741-815)||(28141784-28141858)
chr1 (482-578)||(6205980-6206077)
[»] scaffold0002 (4 HSPs)
scaffold0002 (121-359)||(468592-468829)
scaffold0002 (429-576)||(468393-468538)
scaffold0002 (735-811)||(118147-118223)
scaffold0002 (21-75)||(468871-468925)
[»] scaffold0273 (1 HSPs)
scaffold0273 (36-210)||(19981-20152)
[»] chr6 (33 HSPs)
chr6 (664-815)||(14790781-14790933)
chr6 (41-198)||(35027443-35027595)
chr6 (107-223)||(28894764-28894882)
chr6 (109-279)||(28974605-28974774)
chr6 (404-698)||(35026936-35027233)
chr6 (110-198)||(33679498-33679586)
chr6 (388-567)||(15578848-15579031)
chr6 (404-573)||(12746827-12747000)
chr6 (109-198)||(12746525-12746614)
chr6 (687-815)||(28894166-28894295)
chr6 (388-718)||(33678972-33679305)
chr6 (107-175)||(11296380-11296448)
chr6 (388-573)||(28894408-28894597)
chr6 (111-181)||(15579209-15579279)
chr6 (746-815)||(23842485-23842555)
chr6 (404-470)||(28117858-28117924)
chr6 (664-717)||(1838638-1838691)
chr6 (750-815)||(32110033-32110098)
chr6 (284-354)||(7560325-7560395)
chr6 (749-815)||(14966582-14966648)
chr6 (656-718)||(19664694-19664756)
chr6 (434-496)||(28974388-28974450)
chr6 (388-449)||(3826873-3826934)
chr6 (404-449)||(7560154-7560199)
chr6 (665-718)||(11411045-11411098)
chr6 (700-815)||(22221920-22222036)
chr6 (700-815)||(22247755-22247871)
chr6 (756-811)||(23848152-23848207)
chr6 (404-446)||(2331300-2331342)
chr6 (411-469)||(6856608-6856666)
chr6 (404-470)||(9313819-9313885)
chr6 (663-717)||(15535217-15535271)
chr6 (404-470)||(34502361-34502427)
[»] scaffold0083 (3 HSPs)
scaffold0083 (41-197)||(28978-29129)
scaffold0083 (109-198)||(52838-52927)
scaffold0083 (485-573)||(42703-42792)
[»] scaffold0401 (2 HSPs)
scaffold0401 (404-573)||(4277-4450)
scaffold0401 (109-177)||(3978-4046)
[»] scaffold0043 (1 HSPs)
scaffold0043 (41-573)||(13248-13783)
[»] scaffold0007 (1 HSPs)
scaffold0007 (404-573)||(92451-92623)
[»] scaffold0911 (1 HSPs)
scaffold0911 (109-175)||(4284-4350)
[»] scaffold0352 (1 HSPs)
scaffold0352 (651-815)||(2550-2714)
[»] scaffold2047 (1 HSPs)
scaffold2047 (746-815)||(466-535)
[»] scaffold0637 (1 HSPs)
scaffold0637 (107-158)||(1976-2027)
[»] scaffold0214 (1 HSPs)
scaffold0214 (404-470)||(20074-20140)
[»] scaffold0014 (1 HSPs)
scaffold0014 (741-791)||(224063-224113)
[»] scaffold0068 (1 HSPs)
scaffold0068 (665-744)||(33732-33811)
[»] scaffold0360 (2 HSPs)
scaffold0360 (404-470)||(2472-2538)
scaffold0360 (746-815)||(2802-2871)


Alignment Details
Target: chr5 (Bit Score: 507; Significance: 0; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 507; E-Value: 0
Query Start/End: Original strand, 17 - 738
Target Start/End: Original strand, 36330378 - 36331074
Alignment:
Q  17 atttctatgttgttaattgttttggttatgagtagctaagcttttagattcactaagccatgagataaatatgttgtaatcaatgagcatagcatgtaat 116  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| ||||||||| ||||     ||||    
T  36330378 atttctatgttattaattgttttggttatgagtagcttagcttttagattcactaagcaatgagatgaatatgttgcaatcaatgaacata-----taat 36330472  T
Q  117 ttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgtgtatgactactagctcta 216  Q
    |||||||||||||||||| |||||          ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36330473 ttgttaagaactctcttccacatc----------taatctttatttaaaattgtttgtgtttaatgattttcatataattgtgtatgactactagctcta 36330562  T
Q  217 acttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatattaagata 316  Q
     ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36330563 ccttttcagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatattaagata 36330662  T
Q  317 gagatagaaaattgtgagttatgacttagggattaacgaactaaagattgcttccgcaattaggaatgaacttaagagtttaagatattataacttagga 416  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||        ||||||||||    
T  36330663 gagatagaaaattgtgagttatgacttagggattaacaaactaaagattgcttccgcaattaggaatggacttaagaggtta--------taacttagga 36330754  T
Q  417 aatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagaggaacaaattatttacagtgcg 516  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||    
T  36330755 aatagttttgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggtgaacattgagagagaagaggagcaaattattcacagtgcg 36330854  T
Q  517 caacagaggattcgaaagcttgttcatctattttaatctaattttcaaaccaatttaattaccgtgtaataagtttaatgcaaccaatccaactttgcct 616  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||    
T  36330855 caacagaggattcgaaagtttgttcatctgttttaatctaattttcaaaccaatttaattaccgtgtaataagtttaatgcaaccgatccaac--tgcct 36330952  T
Q  617 agggcaaccacccaatttaacatatccttgaagttaacaaaattgttgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgat 716  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || |||||| | ||||||||||||||||||||    
T  36330953 agtgcaaccacccaatttaacatatcctttaagttaacaaaattgttgagtagaaattaacaacggtcctcgtggatgcaaattttattattacttcgat 36331052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 224 - 679
Target Start/End: Complemental strand, 36335391 - 36334936
Alignment:
Q  224 agttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatattaagatagagatag 323  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||| ||||| |||| ||||||||||||| ||||||| ||||||||||| |||||||||    
T  36335391 agttgtatgaattgatcttagaatttaattgacaactagccatagttgttacatctgaactaatgattctatttaactatacatattaagctagagatag 36335292  T
Q  324 aaaatt-gtgagttatgacttagggattaacgaactaaagattgcttccgcaattaggaatgaacttaagagtttaagatattataacttaggaaatagt 422  Q
    |||||| ||||||||||||||||||||||||||||||| |  |||||| ||  ||| ||||  ||||||||| |||||| ||||||||||||||||  ||    
T  36335291 aaaatttgtgagttatgacttagggattaacgaactaatgtatgcttctgcggttacgaatcgacttaagagattaagagattataacttaggaaagggt 36335192  T
Q  423 tatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagaggaacaaattatttacagtgcgcaacag 522  Q
    | |||||||| ||||| |||||||||||||||||||  | |||||||| |||| |||||||||||||||||| ||  |||||||| ||| ||| ||   |    
T  36335191 tttgagtcaagagatttatcaaaactattaggttaaatcatcgtaaagctaggtgaacattgagagagaagatgagaaaattattcacaatgcacacttg 36335092  T
Q  523 aggattcgaaagcttgttcatct-attttaatctaattttcaaaccaatttaattaccgtgtaataagtttaatgcaaccaatccaactttgcctagggc 621  Q
    |||||||||| ||||| ||||||  |||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||  | | ||||||    
T  36335091 aggattcgaaggcttgatcatctgtttttaatctaattttcaaaccaatttaattactgtgttataagttttatgcaaccaatccaac--tacttagggc 36334994  T
Q  622 aaccacccaatttaacatatccttgaagttaacaaaattgttgagtagaaattaacaa 679  Q
     ||| |||||||||||||||  || |||| ||| ||||||||||||| ||||||||||    
T  36334993 gaccccccaatttaacatattttttaagtcaacgaaattgttgagtacaaattaacaa 36334936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 388 - 566
Target Start/End: Complemental strand, 35432606 - 35432427
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgaga 487  Q
    ||||||| ||||||  ||||||| | |||||   || |||||||| |||||||||||||||| || |||||||||||||||||||||| | |||||||||    
T  35432606 ttaagagattaagaggttataaccttggaaaggattttgagtcaagagattgatcaaaactaataagttaatccgtcgtaaagttaggtggacattgaga 35432507  T
Q  488 gagaagaggaacaaattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaac 566  Q
    |  ||||||| ||||||||| || ||| |||| ||| ||||||||| ||||| |||||| |||||||| |||| ||||||    
T  35432506 gcaaagaggagcaaattattcacggtgagcaatagatgattcgaaaggcttgatcatctgttttaatccaattatcaaac 35432427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 737 - 818
Target Start/End: Original strand, 36332776 - 36332857
Alignment:
Q  737 atacctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggattcat 818  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36332776 atacctatcaagttttttgcgccgttgttggggacggttgaatcatttcgacttgacaattttgttattatttaggattcat 36332857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 664 - 815
Target Start/End: Original strand, 34406011 - 34406163
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag-attagatacatttgtcaaatacctattaagtttttggcgccgtt 762  Q
    |||||||||||||||||||  |||||||||||||| ||||||| |||||||||||  || | |||| ||| |||||| |||| ||||||||||||||| |    
T  34406011 gagtagaaattaacaacggtccttgtggatacgaactttattactacttcgatagcttttggtacacttgccaaatatctatcaagtttttggcgccgct 34406110  T
Q  763 gtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    | ||||||| ||||||| ||||| |||||  ||||| ||||||| ||||||||    
T  34406111 gccggggactgttgaattatttcaacttggtaatttcgttattatttaggatt 34406163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 411 - 576
Target Start/End: Complemental strand, 1810525 - 1810360
Alignment:
Q  411 ttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagaggaacaaattatttac 510  Q
    ||||||||  ||| |||||||| ||||||||||||||||||  |||||||||||||| ||||||| ||||||||||| |||| |||| ||||||||| ||    
T  1810525 ttaggaaagggttttgagtcaagagattgatcaaaactatttagttaatccgtcgtagagttaggtgaacattgagatagaaaaggagcaaattattcac 1810426  T
Q  511 agtgcgcaacagaggattcgaaagcttgttcatctattttaatctaattttcaaaccaatttaatt 576  Q
     |||  | | ||||||||| || ||||| | |||| ||||| | ||| || |||||||||||||||    
T  1810425 ggtgaacgatagaggattcaaaggcttgattatctgttttattataaattccaaaccaatttaatt 1810360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 41 - 223
Target Start/End: Complemental strand, 2500469 - 2500291
Alignment:
Q  41 gttatgagtagctaagcttttagattcactaagccatgagataaatatgttgtaatcaatgagcatagcatgtaatttgttaagaactctcttcgacatc 140  Q
    ||||||||||||||| || ||||||| | ||||||||||||| ||| | |||| |||  |||||||     ||| |||||||||||||||||| ||||||    
T  2500469 gttatgagtagctaaactcttagattgattaagccatgagatgaattt-ttgtgatctgtgagcat-----gtagtttgttaagaactctctttgacatc 2500376  T
Q  141 aatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgactactagctctaacttctt 223  Q
    |||| |||||||||||||||| |||| | |||||| |||||| ||||| ||| ||||  ||||||||||||| | ||||||||||    
T  2500375 aatgaaaacctaatctttattcagaaatatttgtgcttaatgcttttcttatgattgtttgtatgactactaaccctaacttctt 2500291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 482 - 717
Target Start/End: Complemental strand, 2500027 - 2499792
Alignment:
Q  482 ttgagagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaag-cttgttcatctattttaatctaattttcaaaccaatttaattaccg 580  Q
    ||||||||||||||   ||||||| | || ||| |||| |||||||| ||||| |||| ||||||||||||||| |||| |||||||| |||| ||||      
T  2500027 ttgagagagaagagaggcaaattactcactgtgagcaatagaggatttgaaaggcttgatcatctattttaatccaattatcaaaccattttatttactt 2499928  T
Q  581 tgtaataagtttaatgcaacc-aatccaactttgcctagggcaaccacccaatttaacatatccttgaagttaacaaaattgttgagtagaaattaacaa 679  Q
    |||| ||||||| |||||||| ||||||||  ||| ||||||||||    ||||||  | |||||| |  ||||| || ||| | |||||||||||||||    
T  2499927 tgtattaagttttatgcaaccaaatccaac--tgcttagggcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaa 2499830  T
Q  680 cggctcttgtggatacgaattttattattacttcgata 717  Q
    |||  || ||||||||||| ||||||| ||||||||||    
T  2499829 cggtcctcgtggatacgaactttattactacttcgata 2499792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 26337702 - 26337791
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgt 198  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||||||| || ||||| ||| |||||    
T  26337702 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgtttattgcttttcgtatgattgt 26337791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 33321408 - 33321207
Alignment:
Q  17 atttctatgttgttaattgttttggttatgagtagctaagcttttagattcactaagccatgagataaatatgttgtaatcaatgagcatagcatgtaat 116  Q
    ||||||||||  |||||||||| | |||||||||||||| || ||||||| | |||| |||||||| ||| | |||| |||  |||||||     |||||    
T  33321408 atttctatgtatttaattgtttag-ttatgagtagctaaactcttagattgattaagtcatgagatgaatct-ttgtgatctgtgagcat-----gtaat 33321316  T
Q  117 ttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgactactagctc 214  Q
    ||||||||||||||||| |||||||||| ||||| | | |||||| | |||| |||||| |||||| ||||| ||| ||||  ||||||||||||| | |    
T  33321315 ttgttaagaactctctttgacatcaatgaaaaccgagtatttattcaaaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaaccc 33321216  T
Q  215 taacttctt 223  Q
    |||||||||    
T  33321215 taacttctt 33321207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 33920861 - 33920950
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgt 198  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||||| | || ||||| ||| |||||    
T  33920861 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgttcattgcttttcgtatgattgt 33920950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 573
Target Start/End: Original strand, 26337984 - 26338174
Alignment:
Q  387 cttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcga---acatt 483  Q
    |||||||| |||| |  |||||||||||||||  ||| |||||||| |||||||||||||| | |  ||||||||||||||||  ||||  |    | ||    
T  26337984 cttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtcgtaaacctaggttattttcttt 26338083  T
Q  484 gagagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    |||||| |||||   ||||||| | |||||| |||| ||||||||||||| ||||| |||||| |||||||| |||| |||||||| ||||    
T  26338084 gagagataagagaggcaaattactcacagtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaaccatttta 26338174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 688 - 815
Target Start/End: Original strand, 26548381 - 26548510
Alignment:
Q  688 gtggatacgaattt-tattattacttcgatagattagatacatttg-tcaaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttc 785  Q
    ||||||||||| || | ||||||||||||||| ||   |||| ||| | ||||| |||| ||||||||||||||| || ||||||| ||| |||||||||    
T  26548381 gtggatacgaacttattttattacttcgatagttttagtacacttgctaaaatatctatcaagtttttggcgccgctgccggggactgttaaatcatttc 26548480  T
Q  786 gacttgacaattttgttattagttaggatt 815  Q
     ||||| |||||||||| ||| ||||||||    
T  26548481 aacttggcaattttgtttttatttaggatt 26548510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 735 - 815
Target Start/End: Complemental strand, 28565709 - 28565629
Alignment:
Q  735 aaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    ||||| |||| ||||||||||||||| || ||||||| ||| ||||||||| ||||| |||||||||| ||| ||||||||    
T  28565709 aaatatctatcaagtttttggcgccgctgccggggactgttaaatcatttcaacttggcaattttgtttttatttaggatt 28565629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 404 - 573
Target Start/End: Original strand, 9690781 - 9690953
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||  ||| |||||||| |||||||||||||| | |  ||||||||||||| ||| ||||  ||     |||||||||||||    ||    
T  9690781 ttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtcgt-aagctaggttaatttatttgagagagaagaaaggca 9690879  T
Q  501 aattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    ||||| | |||||| |||| ||||||||||||| ||||| |||||| |||||||| |||| |||||||| ||||    
T  9690880 aattactcacagtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaaccatttta 9690953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 404 - 534
Target Start/End: Complemental strand, 33321024 - 33320891
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||  ||| |||||||| |||||||||||||| | |  ||||||||||||||||| ||||  ||   | ||||||||||||||   ||    
T  33321024 ttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtcgtaaagctaggttaatttctttgagagagaagagaggca 33320925  T
Q  501 aattatttacagtgcgcaacagaggattcgaaag 534  Q
    ||||| | ||| || |||| ||||||||||||||    
T  33320924 aattactcacaatgagcaatagaggattcgaaag 33320891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 656 - 718
Target Start/End: Complemental strand, 7650032 - 7649970
Alignment:
Q  656 aaattgttgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||||||||||||||||||||||||||  || ||| ||||||||||  |||||||||||||||    
T  7650032 aaattgttgagtagaaattaacaacggtcctcgtgaatacgaatttatttattacttcgatag 7649970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 746 - 815
Target Start/End: Original strand, 2453642 - 2453711
Alignment:
Q  746 aagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    ||||||||||||||| ||||||||||  ||||| |||||| |||||||||||||||| ||  ||||||||    
T  2453642 aagtttttggcgccgctgtcggggacttttgaaacatttcaacttgacaattttgtttttgtttaggatt 2453711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 750 - 815
Target Start/End: Original strand, 18016619 - 18016684
Alignment:
Q  750 ttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||||||||||||||||||||| ||||||||||||| |||||| | ||| ||||||  ||||||||    
T  18016619 ttttggcgccgttgtcggggactgttgaatcatttcaacttgaaattttcgttattgtttaggatt 18016684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 434 - 573
Target Start/End: Original strand, 33921149 - 33921292
Alignment:
Q  434 agattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaacaaattatttacagtgcgcaacagaggattcg 530  Q
    |||||||||||||| | |  ||||||||||||||||| ||||  ||   | || |||||||||||  |||||||| | |||||| |||| |||||||| |    
T  33921149 agattgatcaaaaccacttagttaatccgtcgtaaagctaggttaatttcttttagagagaagagagacaaattactcacagtgagcaatagaggatttg 33921248  T
Q  531 aaa-gcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    ||| | ||| |||||| ||||||||||||| |||||||| ||||    
T  33921249 aaaggtttgatcatctgttttaatctaattatcaaaccatttta 33921292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 735 - 799
Target Start/End: Original strand, 19686520 - 19686584
Alignment:
Q  735 aaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaatttt 799  Q
    ||||| |||||||||||||||||||  ||  |||||| ||||||||||||||||||| |||||||    
T  19686520 aaatatctattaagtttttggcgccactgctggggactgttgaatcatttcgacttggcaatttt 19686584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 664 - 718
Target Start/End: Complemental strand, 14616511 - 14616457
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||||||||||||||||||  || ||||||||||||||  |||||||||||||||    
T  14616511 gagtagaaattaacaacggtcctcgtggatacgaatttatttattacttcgatag 14616457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 34652871 - 34652789
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    ||||||| |||| || |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  34652871 ttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 34652789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 449
Target Start/End: Complemental strand, 4731931 - 4731886
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaacta 449  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||    
T  4731931 ttataacttaggaaagagttttgagtcaagagattgatcaaaacta 4731886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 650 - 718
Target Start/End: Complemental strand, 1810287 - 1810219
Alignment:
Q  650 ttaacaaaattgttgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    ||||| || ||||| ||||||||||||||||||  || ||| ||||||| ||||||| |||||||||||    
T  1810287 ttaacgaacttgttaagtagaaattaacaacggtcctcgtgaatacgaactttattactacttcgatag 1810219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 744
Target Start/End: Original strand, 21680640 - 21680719
Alignment:
Q  665 agtagaaattaacaacggctcttgtggatacgaattttattattacttcgatagattagatacatttgtcaaatacctat 744  Q
    ||||||||||||||||||  || |||||||| || ||||||| ||||||||||| || | |||| ||| |||||| ||||    
T  21680640 agtagaaattaacaacggtcctcgtggatacaaactttattactacttcgatagttttggtacacttgccaaatatctat 21680719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 2453301 - 2453367
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  2453301 ttataacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaag 2453367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 3195112 - 3195178
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  3195112 ttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 3195178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 667 - 760
Target Start/End: Complemental strand, 11988941 - 11988848
Alignment:
Q  667 tagaaattaacaacggctcttgtggatacgaattttattattacttcgataga-ttagatacatttgtcaaatacctattaagtttttggcgccg 760  Q
    ||||| |||| ||||| ||| ||||| ||||||| | ||||||||||||| || || ||| || |||||||||| |||||||||||||| |||||    
T  11988941 tagaagttaagaacggttctcgtggaaacgaattat-ttattacttcgattgaatttgattcacttgtcaaatatctattaagtttttgacgccg 11988848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 688 - 785
Target Start/End: Complemental strand, 15542440 - 15542343
Alignment:
Q  688 gtggatacgaattttattattacttcgataga-ttagatacatttgtcaaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttc 785  Q
    ||||| ||||||||| ||||||||||||| || || | | || ||| |||||| ||||  |||||||||||||| || ||||||| |||||||||||||    
T  15542440 gtggaaacgaatttt-ttattacttcgatcgaatttggttcacttgccaaatatctatatagtttttggcgccgctgccggggactgttgaatcatttc 15542343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 19686188 - 19686254
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  19686188 ttataacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaag 19686254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Original strand, 22036208 - 22036282
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||||||||||||| || ||||||| |||||||||||||  ||||  ||||| ||||||  ||||||||    
T  22036208 ctatcaagtttttggcgccgctgccggggactgttgaatcatttcagcttggaaatttcgttattgtttaggatt 22036282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 28562459 - 28562393
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  28562459 ttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 28562393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 28566027 - 28565961
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  28566027 ttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 28565961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 746 - 815
Target Start/End: Original strand, 30761767 - 30761836
Alignment:
Q  746 aagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||||||||| |||| ||  |||||| ||||||||||||| ||||| |||||||||| ||  ||||||||    
T  30761767 aagtttttggtgccgctgctggggactgttgaatcatttcaacttggcaattttgtttttgtttaggatt 30761836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 718
Target Start/End: Original strand, 33921378 - 33921431
Alignment:
Q  665 agtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||||||||| |||||||  || ||||||||||| ||||||| |||||||||||    
T  33921378 agtagaaattcacaacggtcctcgtggatacgaactttattactacttcgatag 33921431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 129 - 578
Target Start/End: Complemental strand, 26822625 - 26822184
Alignment:
Q  129 ctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgtgtatgactactagctctaacttcttagttg 228  Q
    ||||| |||||||||| |||| || |||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||||  ||||||| | |||||    
T  26822625 ctctttgacatcaatgaaaacttagtctttattcagaattgtttgtgtttaatgtttttcttataattttgtatgactactagacctaacttgtgagttg 26822526  T
Q  229 tatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatattaagatagagatagaaaat 328  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||    
T  26822525 tatgaattgatcttagaatttaattgactattagtcatagctattaaatctgaactaatgattatgtttaactttacatattaagctagagataaaaaat 26822426  T
Q  329 tgtgagttatgacttagggattaacgaactaaagattgcttccgcaattaggaatgaacttaagagtttaagatattataacttaggaaatagttatgag 428  Q
    ||||||||||||||||||||||||||||||||| |||||||||    ||||||||  |||||||||        |||||||||||||||| |||| |||     
T  26822425 tgtgagttatgacttagggattaacgaactaaatattgcttccatggttaggaatcgacttaagag--------attataacttaggaaagagttttgac 26822334  T
Q  429 tcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagaggaacaaattatttacagtgcgcaacagaggatt 528  Q
    |||| | ||||||||||||||||||||||||| || |||||  |||| ||||||||||| ||||||||| ||||||||| |||||| |||| ||| ||||    
T  26822333 tcaagaaattgatcaaaactattaggttaatcagttgtaaaactaggtgaacattgagaaagaagaggagcaaattattcacagtgtgcaatagatgatt 26822234  T
Q  529 cgaaagcttgttcatctattttaatctaattttcaaaccaatttaattac 578  Q
     ||| ||||| |||| ||||||||||||||| ||||||||||||| ||||    
T  26822233 tgaaggcttgatcatttattttaatctaattctcaaaccaatttatttac 26822184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 108 - 464
Target Start/End: Original strand, 11270779 - 11271135
Alignment:
Q  108 gcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgtgtatgacta 207  Q
    ||||||||||| ||||| ||| |||| || ||||||| ||||||| |||||||| | ||||| |||||||||||| |||||| |||||||||| ||||||    
T  11270779 gcatgtaatttattaagtactttctttgatatcaatgaaaacctattctttattcataattggttgtgtttaatgcttttcaaataattgtgtttgacta 11270878  T
Q  208 ctagctctaacttcttagttgtatgaattg-atcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttaca 306  Q
    ||| | |||||||||||||| ||||||||| || || ||  |||||||| | |||| | ||||| ||||| || | ||||| ||| |||||| |||||||    
T  11270879 ctaaccctaacttcttagttatatgaattgaatgttggatattaattgagtgctagccctagctattaaacctgatctaataattttgtttagctttaca 11270978  T
Q  307 tattaagatagagatagaaaattgtgagttatgac-ttagggattaacgaactaaagattgcttccgcaattaggaatgaacttaagagtttaagatatt 405  Q
    ||| |   ||||||||| ||  || |||||||||| |||||| | ||||||||||| |||||||||||| |||  |||   |||||||| ||||||  ||    
T  11270979 tatgatactagagataggaagctgcgagttatgacattaggg-tcaacgaactaaatattgcttccgcagttacaaatcgtcttaagagattaagaggtt 11271077  T
Q  406 ataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtc 464  Q
    |||||||||||||  ||| ||| |  |||||||||||||||||||||||||||||||||    
T  11271078 ataacttaggaaagggttttgact-taaagattgatcaaaactattaggttaatccgtc 11271135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 647 - 815
Target Start/End: Complemental strand, 26822138 - 26821970
Alignment:
Q  647 aagttaacaaaattgttgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatagattagatacatttgtcaaatacctatta 746  Q
    |||||||  ||||||||||||| ||||||||| |||  |||||||||||||||||||||||||||||||||| || | |||| ||  ||||   |||| |    
T  26822138 aagttaatgaaattgttgagtaaaaattaacagcggtccttgtggatacgaattttattattacttcgatagttttggtacactttccaaaagtctatca 26822039  T
Q  747 agtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||  ||||| ||||||| ||| ||||    
T  26822038 agtttttggcaccgttgtcggggactgttggatcatttcgacttggaaatttcgttattatttaagatt 26821970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 404 - 576
Target Start/End: Original strand, 19869001 - 19869173
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagaggaacaaat 503  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||||  ||||||||||| || ||||||| |||||||||||||||||| ||  ||||    
T  19869001 ttataacttaggaaagagttttgagtcaagagattgatcaaaactatttagttaatccgtcatagagttaggtgaacattgagagagaagatgagaaaat 19869100  T
Q  504 tatttacagtgcgcaacagaggattcgaaagcttgttcatctattttaatctaattttcaaaccaatttaatt 576  Q
    |||| || |||  ||| ||||||||| || ||||| | || | ||||| | ||| || |||||||||||||||    
T  19869101 tattcaccgtgaacaatagaggattcaaaggcttgattatatgttttattataaattccaaaccaatttaatt 19869173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 109 - 529
Target Start/End: Original strand, 46542067 - 46542473
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgtgtatgactac 208  Q
    |||||||||||||| |||||||||| ||||| ||||||| |||| | || ||||||  || ||||||||||||| |||| |||| ||| ||||||||| |    
T  46542067 catgtaatttgttatgaactctctttgacattaatggaatcctagtatt-atttagttttatttgtgtttaatgttttttatatgattatgtatgactgc 46542165  T
Q  209 tagctctaacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacata 308  Q
    |||| ||||||||||| || ||||||||||| ||||| ||||||||||||               ||| || | ||||| | | ||||| |||| |||||    
T  46542166 tagccctaacttcttaattatatgaattgattttagaatttaattgacta---------------aaacctgacctaataagtttgtttgacttaacata 46542250  T
Q  309 ttaagatagagatagaaaattgt-gagttatgacttagggattaacgaactaaagattgcttccgcaa-ttaggaatgaacttaagagtttaagatatta 406  Q
    ||||| ||||||||||||||||| |||| ||||| |||| ||||||||||||   ||  |||||  |  ||| || |  ||||||||| |||||  ||||    
T  46542251 ttaagctagagatagaaaattgttgagtaatgacataggaattaacgaactagtaata-cttccaaaggttatgagtcgacttaagagattaagggatta 46542349  T
Q  407 taacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagaggaacaaatta- 505  Q
    ||| ||||||||   || ||| |||| ||||| ||||||||||||  |  ||| |||||||||  ||||  |||||| ||||||||||||  |||||||     
T  46542350 taatttaggaaaggattttgactcaagagattaatcaaaactattgtgccaattcgtcgtaaaactaggtaaacattaagagagaagaggggcaaattat 46542449  T
Q  506 tttacagtgcgcaacagaggattc 529  Q
    ||||||||| |||| |||||||||    
T  46542450 tttacagtgagcaatagaggattc 46542473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 3305569 - 3305685
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgact 206  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| ||||  |||||||||    
T  3305569 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgact 3305668  T
Q  207 actagctctaacttctt 223  Q
    |||| | ||| ||||||    
T  3305669 actaaccctagcttctt 3305685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 41 - 223
Target Start/End: Original strand, 27054528 - 27054706
Alignment:
Q  41 gttatgagtagctaagcttttagattcactaagccatgagataaatatgttgtaatcaatgagcatagcatgtaatttgttaagaactctcttcgacatc 140  Q
    ||||||||||||||| || ||||||| | ||||||||||||| ||| | |||| |||  ||||||     |||||||| |||||||||||||| ||||||    
T  27054528 gttatgagtagctaaactcttagattgattaagccatgagatgaatct-ttgtgatctgtgagca-----tgtaatttattaagaactctctttgacatc 27054621  T
Q  141 aatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgactactagctctaacttctt 223  Q
    |||| ||||||| || ||||| |||||| |||||| |||||| ||||| ||| ||||  ||||||||||||| | ||||||||||    
T  27054622 aatgaaaacctagtcattattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaaccctaacttctt 27054706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 28327163 - 28327279
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgact 206  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| ||||  |||||||||    
T  28327163 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgact 28327262  T
Q  207 actagctctaacttctt 223  Q
    |||| | ||| ||||||    
T  28327263 actaaccctagcttctt 28327279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 28330488 - 28330604
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgact 206  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| ||||  |||||||||    
T  28330488 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgact 28330587  T
Q  207 actagctctaacttctt 223  Q
    |||| | ||| ||||||    
T  28330588 actaaccctagcttctt 28330604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 18551509 - 18551637
Alignment:
Q  226 ttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatattaagatagagatagaa 325  Q
    |||||| ||||||||||||   ||||||||||||||  | ||||| ||||| || || || ||||||||||| ||||||||||| ||  ||||||||| |    
T  18551509 ttgtattaattgatcttaggagttaattgactactaaccctagctattaaacctgaaatagtgattctgtttgactttacatatgaaactagagatagga 18551608  T
Q  326 aattgtgagttatgacttagggattaacg 354  Q
    | ||| ||||||||||||| |||||||||    
T  18551609 agttgcgagttatgacttatggattaacg 18551637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 201 - 331
Target Start/End: Original strand, 26551413 - 26551543
Alignment:
Q  201 atgactactagctctaacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaac 300  Q
    ||||||||| |||||||||| |||  | ||||| ||||||||||| ||| |||||||||||| |||| || |||||||||| |||   | |||| |||||    
T  26551413 atgactactggctctaactttttaaatatatgagttgatcttagaatttcattgactactagccataacttttaaatctaacctaggaaatctgattaac 26551512  T
Q  301 tttacatattaagatagagatagaaaattgt 331  Q
     | |||||||||| |||||||||| ||||||    
T  26551513 gtaacatattaagttagagatagataattgt 26551543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 4250105 - 4250194
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgt 198  Q
    |||||||||||||||| |||||||| |||||||||| ||||||| |||||||| |||||| |||||||| | || ||||| ||| |||||    
T  4250105 catgtaatttgttaagtactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgttcattgcttttcgtatgattgt 4250194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 388 - 573
Target Start/End: Original strand, 28327446 - 28327635
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattg 484  Q
    ||||||| |||| |  |||||||||||||||  ||| || ||||| |||||||||||||| | |  ||||||||||||| ||| ||||  ||   | |||    
T  28327446 ttaagagattaaaaggttataacttaggaaagggttttgtgtcaagagattgatcaaaaccacttagttaatccgtcgtcaagctaggttaatttctttg 28327545  T
Q  485 agagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaag-cttgttcatctattttaatctaattttcaaaccaattta 573  Q
    |||||||||||   ||||||| | |||||| |||| |||| ||||||||| |||| |||||| |||||||| |||| |||||||| ||||    
T  28327546 agagagaagagaggcaaattactcacagtgagcaatagagaattcgaaagacttgatcatctgttttaatccaattatcaaaccatttta 28327635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 388 - 573
Target Start/End: Original strand, 28330771 - 28330960
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattg 484  Q
    ||||||| |||| |  |||||||||||||||  ||| || ||||| |||||||||||||| | |  ||||||||||||| ||| ||||  ||   | |||    
T  28330771 ttaagagattaaaaggttataacttaggaaagggttttgtgtcaagagattgatcaaaaccacttagttaatccgtcgtcaagctaggttaatttctttg 28330870  T
Q  485 agagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaag-cttgttcatctattttaatctaattttcaaaccaattta 573  Q
    |||||||||||   ||||||| | |||||| |||| |||| ||||||||| |||| |||||| |||||||| |||| |||||||| ||||    
T  28330871 agagagaagagaggcaaattactcacagtgagcaatagagaattcgaaagacttgatcatctgttttaatccaattatcaaaccatttta 28330960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 735 - 815
Target Start/End: Original strand, 10960243 - 10960323
Alignment:
Q  735 aaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    ||||| |||| ||||||||||||||| || ||||||| ||||||||||||| ||||| |||||||||| ||  ||||||||    
T  10960243 aaatatctatcaagtttttggcgccgctgccggggactgttgaatcatttcaacttggcaattttgtttttgtttaggatt 10960323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 388 - 573
Target Start/End: Original strand, 4250388 - 4250577
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattg 484  Q
    ||||||| |||| |  ||||||||| |||||  ||| |||||||| |||||||||||||| | |  ||||||||||||||||| ||||  ||   | |||    
T  4250388 ttaagagattaaaaggttataacttcggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtcgtaaagctaggttaatttctttg 4250487  T
Q  485 agagagaagaggaacaaattatttacagtgcgcaacagaggattcg-aaagcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    |||||| ||||   ||||||| | |||||| |||| |||||||| | ||| |||| |||||| |||||||| |||| |||||||| ||||    
T  4250488 agagaggagagaggcaaattaatcacagtgagcaatagaggatttgaaaatcttgatcatctgttttaatccaattatcaaaccatttta 4250577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 735 - 815
Target Start/End: Original strand, 10963750 - 10963830
Alignment:
Q  735 aaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    ||||| |||| ||||||||||||||| || ||||||| ||||||||||||| ||||  |||||||||| ||  ||||||||    
T  10963750 aaatatctatcaagtttttggcgccgctgccggggactgttgaatcatttcaacttagcaattttgtttttgtttaggatt 10963830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 815
Target Start/End: Original strand, 2775930 - 2776004
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||||||||||||| || ||||||| ||||| ||||||| | |||| ||||||||| ||| ||||||||    
T  2775930 ctatcaagtttttggcgccgctgccggggactgttgagtcatttcaatttgaaaattttgtttttatttaggatt 2776004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 749 - 815
Target Start/End: Original strand, 9155178 - 9155244
Alignment:
Q  749 tttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||||||||||| || ||||||| ||||||||||||| ||||| |||||||||| ||  ||||||||    
T  9155178 tttttggcgccgctgccggggactgttgaatcatttcaacttggcaattttgtttttgtttaggatt 9155244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 10966919 - 10967001
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    ||||||| |||| | ||||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  10966919 ttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 10967001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 25888568 - 25888502
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  25888568 ttataacttaggaaatggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 25888502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 815
Target Start/End: Original strand, 28327801 - 28327875
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| |||||||||||||||||| ||||||| ||||| ||||||| | |||  ||||||||| ||| ||||||||    
T  28327801 ctatcaagtttttggcgccgttgccggggactgttgagtcatttcaatttggtaattttgtttttatttaggatt 28327875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 741 - 802
Target Start/End: Original strand, 2779172 - 2779233
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgtt 802  Q
    |||| ||||||||||||||| |||||||||| ||||| ||||||| | |||| |||||||||    
T  2779172 ctatcaagtttttggcgccgctgtcggggactgttgagtcatttcaatttgaaaattttgtt 2779233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 10959903 - 10959964
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaacta 449  Q
    ||||||| |||| | ||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  10959903 ttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaacta 10959964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 10963410 - 10963471
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaacta 449  Q
    ||||||| |||| | ||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  10963410 ttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaacta 10963471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 566
Target Start/End: Original strand, 27054889 - 27055056
Alignment:
Q  404 ttataacttaggaaatagttat-gagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaac 499  Q
    |||||||||||||||  ||| | ||||||| |||||||||||||| | |  ||||||  ||||||||| ||||  ||   | ||||||||||||||   |    
T  27054889 ttataacttaggaaagggtttttgagtcaagagattgatcaaaaccacttagttaatttgtcgtaaagctaggttaatttctttgagagagaagagagcc 27054988  T
Q  500 aaattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaac 566  Q
    |||||| | || ||| |||| ||||||||||||| ||||| |||||| |||||||| |||| ||||||    
T  27054989 aaattactcacggtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaac 27055056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 665 - 718
Target Start/End: Original strand, 27055155 - 27055208
Alignment:
Q  665 agtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    ||||||||||||||||||  || ||||||||||| ||||||| |||||||||||    
T  27055155 agtagaaattaacaacggtcctcgtggatacgaaatttattactacttcgatag 27055208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 665 - 721
Target Start/End: Original strand, 19869261 - 19869317
Alignment:
Q  665 agtagaaattaacaacggctcttgtggatacgaattttattattacttcgatagatt 721  Q
    ||||||||||||||||||  || ||||||||||| ||||||| ||||| ||||||||    
T  19869261 agtagaaattaacaacggtcctcgtggatacgaactttattactactttgatagatt 19869317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 734 - 785
Target Start/End: Complemental strand, 20536345 - 20536294
Alignment:
Q  734 caaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttc 785  Q
    |||||| |||| |||||||||| ||||||||||||||| ||||||| |||||    
T  20536345 caaatatctatcaagtttttggtgccgttgtcggggactgttgaattatttc 20536294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 451
Target Start/End: Complemental strand, 20536683 - 20536636
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactatt 451  Q
    |||||||||||||||  ||| |||||||| ||||||||||||||||||    
T  20536683 ttataacttaggaaagggttttgagtcaagagattgatcaaaactatt 20536636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 2784140 - 2784206
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  2784140 ttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 2784206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 4225951 - 4225885
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  4225951 ttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 4225885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Complemental strand, 17531413 - 17531339
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||||||||||| | || ||||||| ||||| ||||||| | ||| |||||||||| ||| ||||||||    
T  17531413 ctatcaagtttttggcgcagctgccggggactgttgagtcatttcaatttggcaattttgtttttatttaggatt 17531339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 18551671 - 18551753
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    ||||||| |||| |  |||||||||||||||  ||| |||| ||| |||||||||||||| | |  |||||||||||||||||    
T  18551671 ttaagagattaaaaggttataacttaggaaagggttttgagacaagagattgatcaaaaccacttagttaatccgtcgtaaag 18551753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Complemental strand, 19304450 - 19304376
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| |||||||||||||||||| | |||||  || ||||||||| ||||| || ||||||| ||| ||||||||    
T  19304450 ctatcaagtttttggcgccgttgccagggacttttaaatcatttcaacttggcatttttgtttttatttaggatt 19304376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 404 - 465
Target Start/End: Complemental strand, 36037055 - 36036994
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcg 465  Q
    ||||||| |||||||  ||| |||||||| |||||||||||| ||| || ||||||||||||    
T  36037055 ttataacctaggaaagggttttgagtcaagagattgatcaaagctaataagttaatccgtcg 36036994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 183; Significance: 1e-98; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 112 - 573
Target Start/End: Complemental strand, 28578309 - 28577847
Alignment:
Q  112 gtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgtgtatgactactag 211  Q
    ||||||||||||| |||||||| || |||| || ||| ||||| |||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  28578309 gtaatttgttaagtactctctttgatatcagtgaaaatctaatttttattcaaaattgtttgtatttaatgcttttcatataattgtgtatgactactag 28578210  T
Q  212 ctctaacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatatta 311  Q
    | |||||||||||||| ||| ||||||| || ||  ||||||||||| ||| | |  || ||||| || ||||||| ||| ||||||  ||||||||| |    
T  28578209 ccctaacttcttagttatatcaattgattttggatcttaattgactagtagccctgtctattaaacctgaactaataattttgtttacatttacatatga 28578110  T
Q  312 agatagagatagaaaattgtgagttatgacttagggattaacgaactaaagattgcttccgcaattaggaatgaacttaagagtttaagatattataact 411  Q
    |  |||||||||||||||| ||||||||||||  |||||||||||||||| |||||||| ||| ||||||||  ||||||||| |||||| ||||||||     
T  28578109 aactagagatagaaaattgcgagttatgactttaggattaacgaactaaacattgcttcggcagttaggaattgacttaagaggttaagagattataacc 28578010  T
Q  412 taggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagaggaacaaattatttaca 511  Q
    ||||||| |||| ||| |||| ||||||||||||||||||||||||||||||| ||||| ||||  ||| |||||||||||||||  |||||||||  ||    
T  28578009 taggaaagagttttgactcaagagattgatcaaaactattaggttaatccgtcataaagctaggttaactttgagagagaagaggggcaaattattcgca 28577910  T
Q  512 gtgcgcaacagaggattcgaaagcttgttcatct-attttaatctaattttcaaaccaattta 573  Q
    ||| | |  | ||||||| || ||||| ||| || ||||||||||||||||  ||||||||||    
T  28577909 gtgagtagtaaaggattccaaggcttgatcaactgattttaatctaatttttcaaccaattta 28577847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 146 - 475
Target Start/End: Original strand, 17601445 - 17601773
Alignment:
Q  146 aaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgtgtatgactactagctctaacttcttagttgtatgaattgatcttaga 245  Q
    ||||||| ||||||||||||||| ||| |||| | || ||||||| ||||| ||||||||||||||| |||  || |||||| |||||||||||||| ||    
T  17601445 aaacctagtctttatttagaattatttatgttcactgcttttcatgtaattatgtatgactactagccctat-ttattagttatatgaattgatcttgga 17601543  T
Q  246 ctttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatattaagatagagatagaaaattgtgagttatgacttag 345  Q
      ||||||||||||||| | ||||| ||||| || ||||||| ||| |||||  |||||||||| ||  ||||||||| || ||||||||||||||||      
T  17601544 tattaattgactactagccctagctattaaacctgaactaataattttgtttggctttacatatgaaactagagataggaagttgtgagttatgacttca 17601643  T
Q  346 ggattaacgaactaaagattgcttccgcaattaggaatgaacttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaa 445  Q
    |||||||||||| ||| |||||||||||||||||||||  | ||||||| ||||||  ||||||||||||||   ||| ||| | |  ||||||||||||    
T  17601644 ggattaacgaaccaaacattgcttccgcaattaggaatcgagttaagagattaagaggttataacttaggaacgggttttgacttaggagattgatcaaa 17601743  T
Q  446 actattaggttaatccgtcgtaaagttagg 475  Q
    |||| ||||||| |||||||||||| ||||    
T  17601744 actactaggttattccgtcgtaaagctagg 17601773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 404 - 573
Target Start/End: Complemental strand, 3541268 - 3541096
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||  ||| |||||||| |||||||||||||| | | |||||||||||||||||| ||||  ||   | ||||||||||||||   ||    
T  3541268 ttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttggttaatccgtcgtaaagctaggttaatttctttgagagagaagagaggca 3541169  T
Q  501 aattatttacagtgcgcaacagaggattcgaaagcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    ||||| | ||| || |||| |||||||||||||||||| ||||||||||||||| |||| |||||||| ||||    
T  3541168 aattactcacaatgagcaatagaggattcgaaagcttgatcatctattttaatccaattatcaaaccatttta 3541096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 198 - 354
Target Start/End: Complemental strand, 26075920 - 26075763
Alignment:
Q  198 tgtatgactactagctctaacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgttt 297  Q
    ||||||||||||||  ||||||||||| || ||| ||||||||||||| ||||||||||||||||||||||| ||||||||| |  || | | | |||||    
T  26075920 tgtatgactactagacctaacttcttaattatataaattgatcttagaatttaattgactactagtcatagcagttaaatctgacgtagtaaatttgttt 26075821  T
Q  298 aactttacatattaagatagagatagaaaatt-gtgagttatgacttagggattaacg 354  Q
    | ||| |||||||||| |||||||||||||||  ||||||||||  |||| |||||||    
T  26075820 agcttaacatattaagttagagatagaaaattattgagttatgatataggaattaacg 26075763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 198 - 354
Target Start/End: Complemental strand, 26099707 - 26099550
Alignment:
Q  198 tgtatgactactagctctaacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgttt 297  Q
    ||||||||||||||  ||||||||||| || ||| ||||||||||||| ||||||||||||||||||||||| ||||||||| |  || | | | |||||    
T  26099707 tgtatgactactagacctaacttcttaattatataaattgatcttagaatttaattgactactagtcatagcagttaaatctgacgtagtaaatttgttt 26099608  T
Q  298 aactttacatattaagatagagatagaaaatt-gtgagttatgacttagggattaacg 354  Q
    | ||| |||||||||| |||||||||||||||  ||||||||||  |||| |||||||    
T  26099607 agcttaacatattaagttagagatagaaaattattgagttatgatataggaattaacg 26099550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 386 - 543
Target Start/End: Complemental strand, 26808848 - 26808691
Alignment:
Q  386 acttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattga 485  Q
    ||||||||| ||||||  ||||||| ||| |||   || ||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||     
T  26808848 acttaagagattaagaggttataacctagaaaaggattttgagtcaaaagattgatcaaaactaataagttaatccgtcgtaaagttaggtgaacattgg 26808749  T
Q  486 gagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaagcttgttcat 543  Q
    |||  ||||||| ||||||||  || ||| |||| |||||||||||| ||||| ||||    
T  26808748 gagcaaagaggagcaaattatgcacggtgagcaatagaggattcgaaggcttgatcat 26808691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 233 - 491
Target Start/End: Original strand, 42858846 - 42859094
Alignment:
Q  233 aattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatattaagatagagatagaaaattgtg 332  Q
    |||||||| ||||  ||||||||||||||| |||||||||||| ||| | ||||| ||||||||||||||||||||  ||  ||||||||  ||  || |    
T  42858846 aattgatcatagaacttaattgactactagccatagctgttaattctgacctaataattctgtttaactttacatacgaaactagagataagaagctgcg 42858945  T
Q  333 agttatgacttagggattaacgaactaaagattgcttccgcaattaggaatgaacttaagagtttaagatattataacttaggaaatagttatgagtcaa 432  Q
    |||||||||||||||||||||||||  |  | | |||| | | ||||||||  |||||||||        ||||||||||||||||  ||| ||| ||||    
T  42858946 agttatgacttagggattaacgaac-cagtaatacttctgaagttaggaatcgacttaagag--------attataacttaggaaa-ggttttgactcaa 42859035  T
Q  433 aagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagaga 491  Q
     ||||||||||||||||||  |||| |||||||||||  |||| |||||||||||||||    
T  42859036 gagattgatcaaaactattgtgttagtccgtcgtaaaactaggtgaacattgagagaga 42859094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 404 - 718
Target Start/End: Original strand, 38431411 - 38431728
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||| ||||||| ||| |||||||| |||||||||||||| | |  ||||||  ||||||||| ||||  ||   | ||||||||||||||    |    
T  38431411 ttataactgaggaaatggttttgagtcaagagattgatcaaaaccacttagttaatttgtcgtaaagctaggttaatttctttgagagagaagagaggaa 38431510  T
Q  501 aattatttacagtgcgcaacagaggattcgaaag-cttgttcatctattttaatctaattttcaaaccaatttaattaccgtgtaataagtttaatgcaa 599  Q
    |||||   || ||| |||| |||||||||||||| |||| |||||| ||||||||||||| |||||||| |||| ||||  | || ||||||| ||||||    
T  38431511 aattacccactgtgagcaatagaggattcgaaaggcttgatcatctgttttaatctaattatcaaaccattttatttactttatattaagttttatgcaa 38431610  T
Q  600 cc-aatccaactttgcctagggcaaccacccaatttaacatatccttgaagttaacaaaattgttgagtagaaattaacaacggctcttgtggatacgaa 698  Q
    || ||||||||  ||||||||||||||    ||||||  | |||||| |  ||||| || ||| | ||||||||||||||||||  ||  ||||||||||    
T  38431611 ccaaatccaac--tgcctagggcaacccataaatttactacatcctttattttaactaacttgctaagtagaaattaacaacggtcctcatggatacgaa 38431708  T
Q  699 ttttattattacttcgatag 718  Q
     ||||||| |||||||||||    
T  38431709 ctttattactacttcgatag 38431728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 44018191 - 44018075
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgact 206  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||| |||||| |||||| ||||| ||| ||||  |||||||||    
T  44018191 catgtaatttgttaagaactctctttgacatcaatgaaaacctaatctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgact 44018092  T
Q  207 actagctctaacttctt 223  Q
    |||| | ||| ||||||    
T  44018091 actaaccctagcttctt 44018075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 404 - 718
Target Start/End: Original strand, 6964305 - 6964622
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||   || |||||||| |||||||||||||| | |  |||| |  ||||||||| ||||  ||   | ||||||||||||||   ||    
T  6964305 ttataacttaggaaaggattttgagtcaagagattgatcaaaaccacttagttattttgtcgtaaagctaggttaatttctttgagagagaagagaggca 6964404  T
Q  501 aattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaatttaattaccgtgtaataagtttaatgcaa 599  Q
    ||||| | || ||| |||| ||||||||||||| ||||| |||||| |||||||| |||| |||||||| |||| ||||  |||| ||||||| |||| |    
T  6964405 aattactcactgtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaaccattttatttactttgtattaagttttatgcga 6964504  T
Q  600 cc-aatccaactttgcctagggcaaccacccaatttaacatatccttgaagttaacaaaattgttgagtagaaattaacaacggctcttgtggatacgaa 698  Q
    || ||||||||  | ||||||||||||    ||||||  | |||||| |  ||||| || ||| | ||||||||||||||||||| || |||||||||||    
T  6964505 ccaaatccaac--tacctagggcaacccataaatttactacatcctttattttaacgaacttgctaagtagaaattaacaacggccctcgtggatacgaa 6964602  T
Q  699 ttttattattacttcgatag 718  Q
     || |||| |||||||||||    
T  6964603 cttcattactacttcgatag 6964622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 41 - 223
Target Start/End: Original strand, 6963944 - 6964122
Alignment:
Q  41 gttatgagtagctaagcttttagattcactaagccatgagataaatatgttgtaatcaatgagcatagcatgtaatttgttaagaactctcttcgacatc 140  Q
    ||||||||||||||| || ||||||| | ||||||||||||| ||| | |||| |||  ||||||     ||||||||||||||||||||||| ||||||    
T  6963944 gttatgagtagctaaactcttagattgattaagccatgagatgaatct-ttgtgatctgtgagca-----tgtaatttgttaagaactctctttgacatc 6964037  T
Q  141 aatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgactactagctctaacttctt 223  Q
    |||| ||||||| |||||||| |||||| || ||| |||||| ||||| ||| ||||  ||||||||||||| | ||| ||||||    
T  6964038 aatgaaaacctagtctttattcagaattattggtgcttaatgtttttcttatgattgtttgtatgactactaaccctaccttctt 6964122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 664 - 815
Target Start/End: Complemental strand, 17866436 - 17866284
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatagatta-gatacatttgtcaaatacctattaagtttttggcgccgtt 762  Q
    |||||||||||||||||||  || ||||||||||| ||||||| ||||||||||| ||  | |||| ||| |||||| |||| ||||||||||||||| |    
T  17866436 gagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatagcttttggtacacttgccaaatatctatcaagtttttggcgccgct 17866337  T
Q  763 gtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    | ||||||| |||||||  |||| |||||  ||||| ||||||| ||||||||    
T  17866336 gccggggactgttgaattgtttcaacttggtaatttcgttattatttaggatt 17866284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 12803665 - 12803574
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgt 198  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| |||||    
T  12803665 agcatgtaatttgttaagaactctctttgacatcaatgtaaacctagtctttattcagaattatttgtgcttaatgcttttcttatgattgt 12803574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 38431110 - 38431228
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatga 204  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| ||| || ||||| ||| ||||  |||||||    
T  38431110 agcatgtaatttgttaagaactctctttgacatcaatgtaaacctagtctttattcagaattatttgtgcttactgcttttcttatgattgtttgtatga 38431209  T
Q  205 ctactagctctaacttctt 223  Q
    |||||| | ||| ||||||    
T  38431210 ctactaaccctagcttctt 38431228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 43548910 - 43549028
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatga 204  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||| |||||||| | |||| |||||| |||||| ||||| ||| ||||  |||||||    
T  43548910 agcatgtaatttgataagaactctctttgacatcaatgaaaacctagtctttattcaaaattatttgtgcttaatgcttttcttatgattgtttgtatga 43549009  T
Q  205 ctactagctctaacttctt 223  Q
    |||||| | ||| ||||||    
T  43549010 ctactaaccctagcttctt 43549028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 26152868 - 26152941
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaa 180  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| | |||| |||||| ||||    
T  26152868 agcatgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcataattatttgtgcttaa 26152941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 404 - 573
Target Start/End: Original strand, 26153169 - 26153342
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||| ||||||||||  ||| |||||||| ||||| |||||||| | |  ||||||||||||||||| ||||  ||   | ||||||||||||||   ||    
T  26153169 ttatgacttaggaaagggttttgagtcaagagattaatcaaaaccacttagttaatccgtcgtaaagctaggttaatttctttgagagagaagagaggca 26153268  T
Q  501 aattatttacagtgcgcaacagaggattcgaaag-cttgttcatctattttaatctaattttcaaaccaattta 573  Q
    ||||| | || ||| |||| |||| |||| |||| |||| |||||| |||||||||||||||||||||| ||||    
T  26153269 aattactcacggtgagcaatagagaattcaaaaggcttgatcatctgttttaatctaattttcaaaccatttta 26153342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 404 - 568
Target Start/End: Original strand, 16547021 - 16547189
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||||||||||||| ||||  ||   | ||| ||||||||||   ||    
T  16547021 ttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatccgtcgtaaagctaggttaatttctttgtgagagaagagaggca 16547120  T
Q  501 aattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaacca 568  Q
    ||||  | |||||| |||| ||||||||||||| ||||| |||| | ||||| || |||| ||||||||    
T  16547121 aattcctcacagtgagcaatagaggattcgaaaggcttgatcattttttttagtccaattgtcaaacca 16547189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 404 - 568
Target Start/End: Complemental strand, 16618641 - 16618473
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||||||||||||| ||||  ||   | ||| ||||||||||   ||    
T  16618641 ttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatccgtcgtaaagctaggttaatttctttgtgagagaagagaggca 16618542  T
Q  501 aattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaacca 568  Q
    ||||  | |||||| |||| ||||||||||||| ||||| |||| | ||||| || |||| ||||||||    
T  16618541 aattcctcacagtgagcaatagaggattcgaaaggcttgatcattttttttagtccaattgtcaaacca 16618473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 387 - 470
Target Start/End: Complemental strand, 22083560 - 22083477
Alignment:
Q  387 cttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||| |||| || |||||||||||||||  ||| |||||||| ||||||||||||  || || |||||||||||||||||    
T  22083560 cttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaagttaataagttaatccgtcgtaaag 22083477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 404 - 573
Target Start/End: Complemental strand, 44017892 - 44017719
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||| ||||||||  ||| || ||||| |||||||||||||| | |  ||||||||||||| ||| ||||  ||   | ||||||||||||||   ||    
T  44017892 ttataatttaggaaagggttttgtgtcaagagattgatcaaaaccacttagttaatccgtcgtcaagctaggttaatttctttgagagagaagagaggca 44017793  T
Q  501 aattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    ||||| | |||||| |||| |||| |||||||| ||||| |||||| |||||||| |||| |||||||| ||||    
T  44017792 aattactcacagtgagcaatagagaattcgaaaggcttgatcatctgttttaatccaattatcaaaccatttta 44017719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 28578378 - 28578318
Alignment:
Q  22 tatgttgttaattgttttggttatgagtagctaagcttttagattcactaagccatgagat 82  Q
    ||||||||||||||| || ||||||||||||||| |||||||||| | | |||||||||||    
T  28578378 tatgttgttaattgtcttagttatgagtagctaaacttttagattgattgagccatgagat 28578318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 5826824 - 5826742
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    ||||||| |||| | ||||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  5826824 ttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 5826742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 664 - 718
Target Start/End: Original strand, 6967310 - 6967364
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||||||||||||||||||  || ||||||||||| ||||||| |||||||||||    
T  6967310 gagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatag 6967364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 688 - 815
Target Start/End: Complemental strand, 22232455 - 22232326
Alignment:
Q  688 gtggatacgaattt-tattattacttcgatagattagatacatttg-tcaaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttc 785  Q
    ||||||||||| || | ||||||||||||||| ||   |||| ||| | ||||| |||| ||||||||||||||| || ||||||| ||||| |||||||    
T  22232455 gtggatacgaacttattttattacttcgatagttttagtacacttgctaaaatatctatcaagtttttggcgccgctgccggggactgttgagtcatttc 22232356  T
Q  786 gacttgacaattttgttattagttaggatt 815  Q
     | |||  ||||||||| ||| ||||||||    
T  22232355 aatttggtaattttgtttttatttaggatt 22232326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 688 - 815
Target Start/End: Original strand, 22254284 - 22254413
Alignment:
Q  688 gtggatacgaattt-tattattacttcgatagattagatacatttg-tcaaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttc 785  Q
    ||||||||||| || | ||||||||||||||| ||   |||| ||| | ||||| |||| ||||||||||||||| || ||||||| ||||| |||||||    
T  22254284 gtggatacgaacttattttattacttcgatagttttagtacacttgctaaaatatctatcaagtttttggcgccgctgccggggactgttgagtcatttc 22254383  T
Q  786 gacttgacaattttgttattagttaggatt 815  Q
     | |||  ||||||||| ||| ||||||||    
T  22254384 aatttggtaattttgtttttatttaggatt 22254413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 496
Target Start/End: Complemental strand, 21534996 - 21534929
Alignment:
Q  429 tcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagagg 496  Q
    |||| |||||||||||| | |||  |||||| | |||||||| |||| ||||||||||||||||||||    
T  21534996 tcaagagattgatcaaatccattgtgttaattcatcgtaaagctaggtgaacattgagagagaagagg 21534929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 736 - 815
Target Start/End: Complemental strand, 37415178 - 37415099
Alignment:
Q  736 aatacctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| |||| ||||||||||||||| || ||||||| ||||| ||||||| | |||  ||||||||| ||| ||||||||    
T  37415178 aatatctatcaagtttttggcgccgctgccggggactgttgagtcatttcaatttggtaattttgtttttatttaggatt 37415099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 447
Target Start/End: Original strand, 43549195 - 43549254
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaac 447  Q
    ||||||| |||| || |||||||||||||||  ||| |||||||| ||||||||||||||    
T  43549195 ttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaac 43549254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Complemental strand, 1636697 - 1636623
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||||||||||||| || ||||||| |||||||||||||  ||||  ||||| ||||||  ||||||||    
T  1636697 ctatcaagtttttggcgccgctgccggggactgttgaatcatttcagcttggaaatttcgttattgtttaggatt 1636623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 3541565 - 3541478
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgt 198  Q
    |||||||||||  ||||||||||||  ||||||||| ||||||| |||| ||| |||||| |||||||| | || ||||| ||| |||||    
T  3541565 catgtaatttg--aagaactctctttaacatcaatgaaaacctagtcttcattcagaattatttgtgttcattgcttttcgtatgattgt 3541478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Original strand, 4543145 - 4543219
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||||||||||||| || |||| || ||||| ||||||| | ||| |||||||||| ||| ||||||||    
T  4543145 ctatcaagtttttggcgccgctgccgggaactgttgagtcatttcaatttggcaattttgtttttatttaggatt 4543219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Original strand, 4861428 - 4861502
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||||||||||||| || ||||||| ||| | ||||||| | |||| ||||||||| ||| ||||||||    
T  4861428 ctatcaagtttttggcgccgctgccggggactgttaagtcatttcaatttgataattttgtttttatttaggatt 4861502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 8257906 - 8257972
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  8257906 ttataacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaag 8257972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 664 - 718
Target Start/End: Complemental strand, 17857963 - 17857909
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||||||||||||||||||  || ||||||||||| ||||||| || ||||||||    
T  17857963 gagtagaaattaacaacggtcctcgtggatacgaactttattactatttcgatag 17857909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Complemental strand, 22083199 - 22083125
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||||||||||||| || ||||||| ||| ||||||||| | ||| ||||| |||| ||| ||||||||    
T  22083199 ctatcaagtttttggcgccgctgccggggactgttaaatcatttcaatttggcaattgtgtttttatttaggatt 22083125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 23467268 - 23467202
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  23467268 ttataacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaag 23467202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 664 - 718
Target Start/End: Original strand, 24783572 - 24783626
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||||||||||||||||||  || |||||||| |||||  |||||||||||||||    
T  24783572 gagtagaaattaacaacggtcctcgtggatacaaatttatttattacttcgatag 24783626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 26182320 - 26182386
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| ||| |||| |||||||||||||||| |  |||||| ||||||||||    
T  26182320 ttataacttaggaaagggttttgactcaagagattgatcaaaactaatttgttaattcgtcgtaaag 26182386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 651 - 717
Target Start/End: Complemental strand, 36843032 - 36842966
Alignment:
Q  651 taacaaaattgttgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgata 717  Q
    |||| |||||| ||||||||||||||||||||  ||||||||| |||  ||  ||||||||||||||    
T  36843032 taacgaaattgctgagtagaaattaacaacggtccttgtggattcgatcttatttattacttcgata 36842966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Complemental strand, 45290254 - 45290180
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||||||||||||| || ||||||| ||||| ||||||| | |||  ||||||||| ||| ||||||||    
T  45290254 ctatcaagtttttggcgccgctgccggggactgttgagtcatttcaatttggtaattttgtttttatttaggatt 45290180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 404 - 449
Target Start/End: Original strand, 20100662 - 20100707
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaacta 449  Q
    |||||||||||||||  ||| |||||||| ||||||||||||||||    
T  20100662 ttataacttaggaaagggttttgagtcaagagattgatcaaaacta 20100707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 279
Target Start/End: Complemental strand, 21535228 - 21535147
Alignment:
Q  198 tgtatgactactagctctaacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatct 279  Q
    |||||||||||| || ||| | |||||||| ||| ||||||||||  | ||||||| |||||||| ||||| | ||||||||    
T  21535228 tgtatgactacttgccctagcatcttagttatataaattgatcttgtaatttaattaactactagccatagttattaaatct 21535147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 23775784 - 23775849
Alignment:
Q  289 attctgtttaactttacatattaagatagagatagaaaattgtgagttatgacttagggattaacg 354  Q
    |||||| |||||||||||||| ||  | ||||||| || ||||||||||||| ||||| |||||||    
T  23775784 attctgcttaactttacatatgaaacttgagataggaagttgtgagttatgatttaggaattaacg 23775849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 3e-93; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 111 - 576
Target Start/End: Original strand, 40138846 - 40139312
Alignment:
Q  111 tgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatata--attgtgtatgactac 208  Q
    |||||||||||| |||||||||| |||||||||| || |||||| || ||  ||  || |||||||||||||  ||| | | |  ||| |||||||||||    
T  40138846 tgtaatttgttatgaactctctttgacatcaatgtaatcctaatatt-atccagttttatttgtgtttaatgccttttaaaaatgattatgtatgactac 40138944  T
Q  209 tagctctaacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacata 308  Q
    ||||  |||||||||| || ||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||| | |||||||||||| |||||    
T  40138945 tagccataacttcttaattatatgaattgatcttataatttaattgactactagtcatagctgttaaatctgacctaataaatctgtttaacttaacata 40139044  T
Q  309 ttaagatagagatagaaaattgtgagttatgacttagggattaacgaactaaagattgcttccg-caattaggaatgaacttaagagtttaagatattat 407  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| || |  |||  ||| | ||  | |||||  ||||||||| |||||  |||||    
T  40139045 ttaagctagagatagaaaattgtgagttatgacttagggattaacgagct-agtattaattctgacagctgggaatcgacttaagagattaagggattat 40139143  T
Q  408 aacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagaggaacaaattatt 507  Q
    ||||||| ||| |||| ||| |||| ||||||||||||||||||  ||||||| ||||||||  |||  ||||||||||  |||||||||||||||||||    
T  40139144 aacttagaaaagagttttgactcaagagattgatcaaaactattgtgttaatctgtcgtaaaactagatgaacattgagcaagaagaggaacaaattatt 40139243  T
Q  508 tacagtgcgcaacagaggattcgaaagcttgttcatctattttaatctaattttcaaaccaatttaatt 576  Q
     |||||| |||| |||||||||||| ||||| |||| | ||||||| ||||||||||||||| ||||||    
T  40139244 cacagtgagcaatagaggattcgaaggcttgatcatttgttttaatataattttcaaaccaacttaatt 40139312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 110 - 538
Target Start/End: Complemental strand, 24385560 - 24385132
Alignment:
Q  110 atgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgtgtatgactact 209  Q
    ||||||||||||| |||||||||| ||||| ||||||| |||| | || ||| ||  || |||||||| |||| |||| |||| ||| ||| |||||||     
T  24385560 atgtaatttgttatgaactctctttgacatgaatggaatcctagtatt-attcaggtttatttgtgttcaatgttttttatatgattatgtgtgactacc 24385462  T
Q  210 agctctaacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatat 309  Q
    |||  || ||||||| || ||||| ||||| ||||| ||||||||||||||||| ||| ||||||||||||| ||||| | | ||||| |||| ||||||    
T  24385461 agccttagcttcttaattatatgagttgattttagaatttaattgactactagtaatatctgttaaatctaacctaataaatttgtttgacttaacatat 24385362  T
Q  310 taagatagagatagaaaattgtgagttatgacttagggattaacgaactaaagattgcttccgca-attaggaatgaacttaagagtttaagatattata 408  Q
    || | |||||||||||| |  |||||||||||  ||| ||||||||||||  || | |||||  |  ||| ||||  ||||||| | |||    ||||||    
T  24385361 tacgctagagatagaaattgttgagttatgacaaaggaattaacgaactagtga-tacttccaaaggttatgaatcgacttaagtgattagaggattata 24385263  T
Q  409 acttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagaggaacaaatt-att 507  Q
    | |||||||| | || ||| |||| ||||| ||||||||||||| |||||| |||||||||  |||  ||||||||||||||||||||  |||||| |||    
T  24385262 atttaggaaagaattttgactcaagagattaatcaaaactattatgttaattcgtcgtaaaactagctgaacattgagagagaagaggtgcaaattaatt 24385163  T
Q  508 tacagtgcgcaacagaggattcgaaagcttg 538  Q
    |||| || |||  |||||||| ||| |||||    
T  24385162 tacaatgagcagtagaggatttgaaggcttg 24385132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 216 - 495
Target Start/End: Complemental strand, 32074682 - 32074410
Alignment:
Q  216 aacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatattaagat 315  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||| |||| ||||||||||  | || || ||||||||| |||| || ||||||| |    
T  32074682 aacttcttaattatatgaattgatcttagaatttaattgactactagccatatctgttaaatcccacctcataattctgtttgacttaacgtattaaggt 32074583  T
Q  316 agagatagaaaattg-tgagttatgacttagggattaacgaactaaagattgcttcc-gcaattaggaatgaacttaagagtttaagatattataactta 413  Q
    ||||||| ||||||| |||||||||||||| | ||||||  ||| |  | | |||||  |  ||| ||||  |||||||||        ||||||| |||    
T  32074582 agagataaaaaattgttgagttatgacttatgaattaacagact-agtaatacttccaacggttatgaatcgacttaagag--------attataattta 32074492  T
Q  414 ggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagag 495  Q
    ||||  |||| ||| |||||||||||||||||||||||  ||||||  ||||||||  |||| |||||||||||||||||||    
T  32074491 ggaacgagttttgattcaaaagattgatcaaaactattgtgttaatttgtcgtaaaactaggtgaacattgagagagaagag 32074410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 40678171 - 40678055
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgact 206  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| ||||  |||||||||    
T  40678171 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgact 40678072  T
Q  207 actagctctaacttctt 223  Q
    |||| | ||| ||||||    
T  40678071 actaaccctagcttctt 40678055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 107 - 728
Target Start/End: Complemental strand, 38316448 - 38315819
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatga 204  Q
    ||||||||| ||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| ||||  |||||||    
T  38316448 agcatgtaaattgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgcttaatgtttttcttatgattgtttgtatga 38316349  T
Q  205 ctactagctctaacttctt--agttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactt 302  Q
    |||||| |  || ||||||  | |   || ||||||||||||   || | |||||||||  | ||||| ||||  || || || | ||||||||||| |     
T  38316348 ctactaaccgtagcttctttcaatcacataaattgatcttaggaattgaatgactactaaccctagcttttaatcctgaaatagtaattctgtttaattc 38316249  T
Q  303 tacatattaagatagagatagaaaattgtgagttatgacttagggattaacgaactaaagattgcttccgcaatta-ggaatgaacttaagagtttaaga 401  Q
     |||||  ||  ||||||||| |||||| |  |||||||||| | |||||||  || |  | |||||||||| |||   |||    ||||||  |||| |    
T  38316248 aacataggaacttagagataggaaattgaggattatgacttatgaattaacgttctcacca-tgcttccgcagttattcaatcggtttaagatattaaaa 38316150  T
Q  402 tattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaa 498  Q
      |||||||||||||||  ||| ||||| || ||||||||||| || | |  ||||||  ||||||||| || |  ||   | ||||||||||||||       
T  38316149 ggttataacttaggaaagggttttgagtgaagagattgatcaataccacttagttaatttgtcgtaaagctaagttaatttctttgagagagaagagagg 38316050  T
Q  499 caaattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaatttaattaccgtgtaataagtttaatgc 597  Q
    ||||||| | || ||| |||| ||||||||||||| ||||| |||||| |||||||| |||| |||||||| |||| ||||  |||| ||||||| ||||    
T  38316049 caaattactcactgtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaaccattttatttactttgtattaagttttatgc 38315950  T
Q  598 aacc-aatccaactttgcctagggcaaccac--ccaatttaacatatccttgaagttaacaaaattgttgagtagaaattaacaacggctcttgtggata 694  Q
    |||| ||||||||  |||||||| ||||| |    ||||||  | |||||| |  ||||| || ||| | ||||| ||||||||||||  || |||||||    
T  38315949 aaccaaatccaac--tgcctaggacaaccccgtaaaatttactacatccttaattttaacgaacttgctaagtag-aattaacaacggtcctcgtggata 38315853  T
Q  695 cgaattttattattacttcgatagattagataca 728  Q
    |||| ||||||| ||||||||||| || ||||||    
T  38315852 cgaactttattactacttcgatagttttgataca 38315819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 656 - 718
Target Start/End: Complemental strand, 23673435 - 23673373
Alignment:
Q  656 aaattgttgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||||||||||||||||||||||||||  || ||||||||||||||  |||||||||||||||    
T  23673435 aaattgttgagtagaaattaacaacggtcctcgtggatacgaatttatttattacttcgatag 23673373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 30719777 - 30719859
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    ||||||| |||| || |||||||||||||||  ||| |||||||| |||||||||||| ||| || |||||| ||||||||||    
T  30719777 ttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaagctaataagttaatacgtcgtaaag 30719859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 665 - 718
Target Start/End: Original strand, 29436031 - 29436084
Alignment:
Q  665 agtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    ||||||||||||||||||  || ||||||||||| |||||||||||||||||||    
T  29436031 agtagaaattaacaacggtcctcgtggatacgaactttattattacttcgatag 29436084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 29435753 - 29435835
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    ||||||| |||| || |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  29435753 ttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 29435835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 38326365 - 38326319
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactat 450  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||||    
T  38326365 ttataacttaggaaagagttttgagtcaagagattgatcaaaactat 38326319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 651 - 718
Target Start/End: Complemental strand, 32575780 - 32575713
Alignment:
Q  651 taacaaaattgttgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||| |||| ||||||||||| ||||||||||  || ||||||||||||||  |||||||||| ||||    
T  32575780 taacgaaatcgttgagtagaagttaacaacggtcctcgtggatacgaatttatttattacttcaatag 32575713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 1506753 - 1506671
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    ||||||| |||| || || ||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  1506753 ttaagagattaaaatgttttaacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaag 1506671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 4577843 - 4577909
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  4577843 ttataacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaag 4577909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 11056360 - 11056426
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  11056360 ttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 11056426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Original strand, 24235433 - 24235507
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||||||||||||| || ||||||| ||||| ||||||| | |||  ||||||||| ||| ||||||||    
T  24235433 ctatcaagtttttggcgccgctgccggggactgttgagtcatttcaatttggtaattttgtttttatttaggatt 24235507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 665 - 815
Target Start/End: Complemental strand, 32074239 - 32074086
Alignment:
Q  665 agtagaaattaacaacggctcttgtggatacgaattt--tattattacttcgatagattagatacatttgtcaaatacctattaagtttttggcgccgtt 762  Q
    ||||||||||||||||  |  | |||||||| |||||  ||||||||||||||||  || | || | |||||||||| |||| ||||||| |||| || |    
T  32074239 agtagaaattaacaacaaccatcgtggatacaaatttattattattacttcgataattttggtatacttgtcaaatatctatcaagttttaggcgtcgct 32074140  T
Q  763 gtcggggacggttgaatcatttcgactt-gacaattttgttattagttaggatt 815  Q
    | |||||   |||||||||||| || || || || |||||||||| ||||||||    
T  32074139 gccgggggttgttgaatcattttgatttggaaaagtttgttattatttaggatt 32074086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Original strand, 35077266 - 35077340
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||||||||||||| || ||||||| |||||||||||||  ||||  ||||| ||||||  ||||||||    
T  35077266 ctatcaagtttttggcgccgctgccggggactgttgaatcatttcagcttggaaatttcgttattgtttaggatt 35077340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 664 - 718
Target Start/End: Original strand, 36327089 - 36327143
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||||||| ||||||||||  || ||||||||||||||  |||||||||||||||    
T  36327089 gagtagaagttaacaacggtcctcgtggatacgaatttatttattacttcgatag 36327143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 5e-49; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 437 - 718
Target Start/End: Complemental strand, 21217635 - 21217363
Alignment:
Q  437 ttgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaagct 536  Q
    |||||||||||||||||||||||||||||||||  ||||  |||||||||||||||||  | ||||||||| ||||||||||| |||||||| ||| | |    
T  21217635 ttgatcaaaactattaggttaatccgtcgtaaaactaggttaacattgagagagaagaaaatcaaattattcacagtgcgcaatagaggatttgaaggat 21217536  T
Q  537 tgttcatctattttaatctaattttcaaaccaatttaattaccgtgtaataagtttaatgcaaccaatccaactttgcctagggcaaccacccaatttaa 636  Q
    || | |||| ||||||||||||||||||||||||||| ||||  ||| |||||| | ||  |||||| |||||  |||||||||||||   |||||        
T  21217535 tgattatctgttttaatctaattttcaaaccaatttatttacattgttataagtgttatcgaaccaaaccaac--tgcctagggcaac--tccaat---- 21217444  T
Q  637 catatccttgaagttaacaaaattgttgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
     | || ||| |||||||||||||| ||||||||||||||| |||||  || ||| ||||||||||||||||||||| |||||    
T  21217443 -acattctttaagttaacaaaattattgagtagaaattaataacggtcctcgtgaatacgaattttattattactttgatag 21217363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 37 - 578
Target Start/End: Complemental strand, 26703956 - 26703413
Alignment:
Q  37 tttggttatgagtagctaagcttttagattcactaagccatgagataaatatgttgtaatcaatgagcatagcatgtaatttgttaagaactctcttcga 136  Q
    ||||||||||||||||||| || ||||||| | ||||||||||||| ||| | |||| |||  |||   | |  |||||||||||||||||||||||  |    
T  26703956 tttggttatgagtagctaaactcttagattgattaagccatgagatgaatct-ttgtgatctgtga---tgg--tgtaatttgttaagaactctctttaa 26703863  T
Q  137 catcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgactactagctctaacttctt--agttgtatg 232  Q
    |||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| ||||  ||||||||||||| ||||| ||||||  | |  |||     
T  26703862 catcaatgaaaacctagtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactactaactctagcttctttcaatcatata 26703763  T
Q  233 aattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatattaagatagagatagaaaattgtg 332  Q
    ||||||||||||   || | |||||||||  | ||||| ||||  || || || | ||| ||||||| |  |||||  ||  ||||||||  |||||| |    
T  26703762 aattgatcttaggaattgaatgactactaaccctagcttttaatcctgaaatagtaattatgtttaattcaacataggaacctagagataagaaattgag 26703663  T
Q  333 agttatgacttagggattaacgaactaaagattgcttccgcaatta-ggaatgaacttaagagtttaagatattataacttaggaaatagttatgagtca 431  Q
    |||||||||||| |||||||||  || |  | |||||||||| |||   |||    ||||||| |||| |  ||||||||||||||| |||| |||||||    
T  26703662 agttatgacttatggattaacgttctcacca-tgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagagttttgagtca 26703564  T
Q  432 aaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaacaaattatttacagtgcgcaacagaggatt 528  Q
    | |||||||||||||| | |  ||||||||||||||||| ||||  ||     ||||||||||||||   ||||||| | |||||| |||| ||||||||    
T  26703563 agagattgatcaaaaccacttagttaatccgtcgtaaagctaggttaatttatttgagagagaagagagccaaattactcacagtgagcaatagaggatt 26703464  T
Q  529 cgaaa-gcttgttcatctattttaatctaattttcaaaccaatttaattac 578  Q
    | ||| ||||| |||||| |||||||| |||| |||||||| |||| ||||    
T  26703463 caaaaggcttgatcatctgttttaatccaattatcaaaccattttatttac 26703413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 611 - 718
Target Start/End: Original strand, 2210868 - 2210974
Alignment:
Q  611 ttgcctagggcaaccacccaatttaacatatccttgaagttaacaaaattgttgagtagaaattaacaacggctcttgtggatacgaattttattattac 710  Q
    ||||||||||| ||| |||||||||| |||||||| || ||||| |||||||||||||||| | |||||||| ||| ||||||| |||||||||||||||    
T  2210868 ttgcctagggccacc-cccaatttaatatatcctttaaattaacgaaattgttgagtagaattcaacaacggttctcgtggatatgaattttattattac 2210966  T
Q  711 ttcgatag 718  Q
    || |||||    
T  2210967 tttgatag 2210974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 13978853 - 13978969
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgact 206  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| | | ||||  |||||||||    
T  13978853 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgcttaatgcttttcttctgattgtttgtatgact 13978952  T
Q  207 actagctctaacttctt 223  Q
    |||| | ||| ||||||    
T  13978953 actaaccctagcttctt 13978969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 15850892 - 15851008
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgact 206  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| | |||| |||||| |||||| ||||| ||| ||||  |||||||||    
T  15850892 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcaaaattatttgtgcttaatgcttttcttatgattgtttgtatgact 15850991  T
Q  207 actagctctaacttctt 223  Q
    | || | ||||||||||    
T  15850992 aataaccctaacttctt 15851008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 19928623 - 19928739
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgact 206  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| | | ||||  |||||||||    
T  19928623 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgcttaatgcttttcttctgattgtttgtatgact 19928722  T
Q  207 actagctctaacttctt 223  Q
    |||| | ||| ||||||    
T  19928723 actaaccctagcttctt 19928739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 664 - 815
Target Start/End: Complemental strand, 647286 - 647134
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatagatta-gatacatttgtcaaatacctattaagtttttggcgccgtt 762  Q
    |||||||||||||||||||  || |||||||| || ||||||| ||||||||||| ||  | |||| ||| ||||||  ||| ||||||||||||||| |    
T  647286 gagtagaaattaacaacggtcctcgtggatacaaactttattactacttcgatagcttttggtacacttgccaaatatttatcaagtttttggcgccgct 647187  T
Q  763 gtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    | ||||||| ||||||| ||||| |||||  ||||| ||||||| ||||||||    
T  647186 gccggggactgttgaattatttcaacttggtaatttcgttattatttaggatt 647134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 664 - 815
Target Start/End: Complemental strand, 650558 - 650406
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatagatta-gatacatttgtcaaatacctattaagtttttggcgccgtt 762  Q
    |||||||||||||||||||  || |||||||| || ||||||| ||||||||||| ||  | |||| ||| ||||||  ||| ||||||||||||||| |    
T  650558 gagtagaaattaacaacggtcctcgtggatacaaactttattactacttcgatagcttttggtacacttgccaaatatttatcaagtttttggcgccgct 650459  T
Q  763 gtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    | ||||||| ||||||| ||||| |||||  ||||| ||||||| ||||||||    
T  650458 gccggggactgttgaattatttcaacttggtaatttcgttattatttaggatt 650406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 404 - 573
Target Start/End: Original strand, 19928898 - 19929072
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||  ||| |||||||| |||||||||||||| | |  ||||||||||||||||||||||  ||   | ||||||||||||||   ||    
T  19928898 ttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtcgtaaagttaggttaatttctttgagagagaagagaggca 19928997  T
Q  501 aattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctatttt-aatctaattttcaaaccaattta 573  Q
    ||||| | |||||| |||| ||||||||||||| ||||| |||||| |||| |||| |||| |||||||| ||||    
T  19928998 aattactcacagtgagcaatagaggattcgaaaggcttgatcatctgttttaaatccaattatcaaaccatttta 19929072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 404 - 573
Target Start/End: Original strand, 13979152 - 13979324
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa--cattgagagagaagaggaacaa 501  Q
    |||||||||||||||  ||| |||||||| |||||||||||||| | |  ||||||||||||||||| ||||  ||    ||||||||||||||   |||    
T  13979152 ttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtcgtaaagctaggttaatttcttgagagagaagagaggcaa 13979251  T
Q  502 attatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    |||| | ||||||  ||| ||||||||||||| ||||| |||||| |||||||| |||| |||||||| ||||    
T  13979252 attactcacagtgaacaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaaccatttta 13979324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 656 - 802
Target Start/End: Complemental strand, 26062782 - 26062634
Alignment:
Q  656 aaattgttgagtagaaattaacaacggct--cttgtggatacgaattttattattacttcgatagattagatacatttgtcaaatacctattaagttttt 753  Q
    |||||||||||||||| ||||||||||    || ||||||||||||||  |||||| |||||||| || | | || ||| |||||   ||| ||||||||    
T  26062782 aaattgttgagtagaagttaacaacggggtcctcgtggatacgaatttatttattatttcgatagttttggttcacttgccaaatctttatcaagttttt 26062683  T
Q  754 ggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgtt 802  Q
    ||||||| |||||| ||| ||| ||||||||| ||||||||||||||||    
T  26062682 ggcgccgctgtcggagactgttaaatcatttcaacttgacaattttgtt 26062634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 56089713 - 56089624
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgt 198  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||||| | || ||||| ||| |||||    
T  56089713 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgttcattgcttttcgtatgattgt 56089624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 746 - 815
Target Start/End: Complemental strand, 7394622 - 7394553
Alignment:
Q  746 aagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    ||||||||||||| |||| ||||||| ||||||||||||| |||||  ||||| ||||||| ||||||||    
T  7394622 aagtttttggcgcagttgccggggactgttgaatcatttcaacttggtaatttcgttattatttaggatt 7394553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 388 - 718
Target Start/End: Original strand, 15851175 - 15851509
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattg 484  Q
    ||||||| |||| |  |||||||||||||||  ||| ||||||||||||||||||||||| | |  ||||||  ||||||||| ||||  ||   | |||    
T  15851175 ttaagagattaaaaggttataacttaggaaagggttttgagtcaaaagattgatcaaaaccacttagttaatttgtcgtaaagctaggttaatttctttg 15851274  T
Q  485 agagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaatttaattaccgtgt 583  Q
    |||||||||||   ||||||| | || | | |||| ||||||||| ||| ||||| |||||| |||||| | |||| |||||||| |||| ||||  |||    
T  15851275 agagagaagagagccaaattactcacggagagcaatagaggattcaaaaggcttgatcatctgttttaacccaattatcaaaccattttatttactttgt 15851374  T
Q  584 aataagtttaatgcaacc-aatccaactttgcctagggcaa--ccacccaatttaacatatccttgaagttaacaaaattgttgagtagaaattaacaac 680  Q
      || |||| ||  |||| ||||||||   |||||||||||  |||   ||||||  | |||||| |  ||||| || ||| | ||||||||||||||||    
T  15851375 -ttacgttttataaaaccaaatccaac--agcctagggcaaccccataaaatttactacatcctttattttaacgaacttgctaagtagaaattaacaac 15851471  T
Q  681 ggctcttgtggatacgaattttattattacttcgatag 718  Q
    ||  || ||||||||||| |||| ||||||||||||||    
T  15851472 ggtcctcgtggatacgaactttactattacttcgatag 15851509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 735 - 815
Target Start/End: Original strand, 5670917 - 5670997
Alignment:
Q  735 aaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    ||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||| |||  ||||||||| ||| ||||||||    
T  5670917 aaatatctatcaagtttttggcgccgctgccggggactgttgagtcatttcgatttggtaattttgtttttatttaggatt 5670997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 10247834 - 10247900
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  10247834 ttataacttaggaaatggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaag 10247900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 293 - 354
Target Start/End: Original strand, 11560721 - 11560782
Alignment:
Q  293 tgtttaactttacatattaagatagagatagaaaattgtgagttatgacttagggattaacg 354  Q
    ||||||||||||||||| ||  ||||||||| || ||| ||||||||||||||| |||||||    
T  11560721 tgtttaactttacatatgaaactagagataggaagttgcgagttatgacttaggaattaacg 11560782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 445
Target Start/End: Original strand, 11560832 - 11560873
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaa 445  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  11560832 ttataacttaggaaagagttttgagtcaaaagattgatcaaa 11560873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 23653277 - 23653338
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaacta 449  Q
    ||||||| |||| || |||||||||||||||  ||| |||||||||| ||||||||||||||    
T  23653277 ttaagagattaaaatgttataacttaggaaagggttttgagtcaaaaaattgatcaaaacta 23653338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 747 - 815
Target Start/End: Complemental strand, 15445118 - 15445050
Alignment:
Q  747 agtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    ||||||||||||||||| ||||||| ||||| ||||||| | |||  ||||||||| ||| ||||||||    
T  15445118 agtttttggcgccgttgccggggactgttgagtcatttcaatttggaaattttgtttttatttaggatt 15445050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 403 - 449
Target Start/End: Original strand, 17670330 - 17670376
Alignment:
Q  403 attataacttaggaaatagttatgagtcaaaagattgatcaaaacta 449  Q
    ||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  17670330 attataacttaggaaagggttttgagtcaagagattgatcaaaacta 17670376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 18859797 - 18859863
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  18859797 ttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 18859863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Complemental strand, 19864164 - 19864090
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| |||||||||| || | || ||||||| ||||||||||||| | |||  ||||||||||||| ||||||||    
T  19864164 ctatcaagtttttggtgcagctgccggggactgttgaatcatttcaatttggtaattttgttattatttaggatt 19864090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 668 - 718
Target Start/End: Complemental strand, 33400154 - 33400104
Alignment:
Q  668 agaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    ||||||||||||||| ||| ||||||||||| ||||||| ||| |||||||    
T  33400154 agaaattaacaacggttctcgtggatacgaactttattactacctcgatag 33400104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 386 - 492
Target Start/End: Original strand, 39050584 - 39050690
Alignment:
Q  386 acttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattga 485  Q
    ||||||||| |||||  ||||||| ||| ||||  ||| ||| |||||||||||||||||||||||  |||||| |  ||||||  ||||  ||||||||    
T  39050584 acttaagagattaagggattataatttaagaaagggttttgactcaaaagattgatcaaaactattgtgttaattcaacgtaaaactaggtcaacattga 39050683  T
Q  486 gagagaa 492  Q
    || ||||    
T  39050684 gaaagaa 39050690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 7e-36; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 175 - 575
Target Start/End: Complemental strand, 31468450 - 31468053
Alignment:
Q  175 gtttaatgattttcatataattgtgtatgactactagctctaacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgtta 274  Q
    ||||||||  ||| |||| ||| ||| ||||||||||| | || |||||| |  ||||||||||| ||||| ||| ||||||||||||  ||||||||||    
T  31468450 gtttaatgccttttatattattatgtgtgactactagccccaatttcttaatcatatgaattgattttagaatttcattgactactagctatagctgtta 31468351  T
Q  275 aatctaaactaatgattctgtttaactttacatattaagatagagatagaaaattg-tgagttatgacttagggattaacgaactaaagattgcttccgc 373  Q
    ||||||| ||||| | ||||||| |||| |||||||||| |||||||||||||||| |||||||||||||| | |||||   ||| |  | | |||||      
T  31468350 aatctaacctaataaatctgtttgacttaacatattaagctagagatagaaaattgttgagttatgacttatgaattaagagact-attaatacttccat 31468252  T
Q  374 aa--ttaggaatgaacttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagt 471  Q
    ||  ||| ||||  | |||||||     ||||| || | ||||||||  ||| ||| |||| |||||||| |||||||||  |||||| ||| |||||      
T  31468251 aaggttatgaattgatttaagag-----gatataattaattaggaaagtgttttgactcaagagattgatgaaaactattgagttaattcgtggtaaaac 31468157  T
Q  472 taggcgaacattgagagagaagaggaacaaatt-atttacagtgcgcaacagaggattcgaaagcttgttcatctattttaatctaattttcaaaccaat 570  Q
    |||| ||||||||||||||||||||| ||||||  |||||| || |||| | |||||||||| ||||  ||||||  ||||| ||||||||||||||||     
T  31468156 taggtgaacattgagagagaagaggagcaaattgttttacaatgagcaataaaggattcgaaggcttaatcatct-gtttaacctaattttcaaaccaac 31468058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 404 - 799
Target Start/End: Complemental strand, 39660057 - 39659659
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||  ||| |||||||| |||||||||||||| | || || |||  ||||||||| ||||  ||   | ||||||||||||||   ||    
T  39660057 ttataacttaggaaagggttttgagtcaagagattgatcaaaaccactaagt-aatttgtcgtaaagctaggttaatttctttgagagagaagagagcca 39659959  T
Q  501 aattatttacagtgcgcaacagaggattcgaaag-cttgttcatctattttaatctaattttcaaaccaatttaattaccgtgtaataagtttaatgcaa 599  Q
    ||||| | || ||| |||| |||||||||||||| || | |||||| |||||||| |||| |||||||| |||| ||||  |||  || |||| ||  ||    
T  39659958 aattactcacggtgagcaatagaggattcgaaaggctagatcatctgttttaatccaattatcaaaccattttatttactttgtt-tacgttttataaaa 39659860  T
Q  600 ccaa-tccaactttgcctagggcaaccacccaa--tttaacatatccttgaagttaacaaaattgttgagtagaaattaacaacggctcttgtggatacg 696  Q
    |||| |||||||  ||||||||||||| |  ||  ||||  | |||||| |  ||||| || ||| | ||||||||||||||| ||  || |||||||||    
T  39659859 ccaaatccaact--gcctagggcaaccccataaaatttactacatcctttattttaacgaacttgctaagtagaaattaacaatggtcctcgtggatacg 39659762  T
Q  697 aattttattattacttcgatagattagatacatttgtcaaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaat 796  Q
    || ||||||| ||||||||||| || | |||| ||| |||||| |||| ||||||||||||||| || ||||||| ||||||||||||| ||||||||||    
T  39659761 aactttattactacttcgatagtttcggtacacttgccaaatatctatcaagtttttggcgccgctgccggggactgttgaatcatttcaacttgacaat 39659662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 39660358 - 39660240
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatga 204  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| ||||  |||||||    
T  39660358 agcatgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatga 39660259  T
Q  205 ctactagctctaacttctt 223  Q
    |||||| | ||||||||||    
T  39660258 ctactaaccctaacttctt 39660240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 109 - 357
Target Start/End: Original strand, 14627167 - 14627414
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgtgtatgactac 208  Q
    |||||||||||||  |||||| ||| || |||| |||||||||| || ||||| | |||| ||| | ||||||| ||||||| ||||| |||||||||||    
T  14627167 catgtaatttgttt-gaactccctttgatatcattggaaacctagtcattattcataattatttatatttaatgcttttcatgtaattatgtatgactac 14627265  T
Q  209 tagctctaacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacata 308  Q
    |||| ||| |||||||||| |||||||   || |    |||||||||||||||| | || || |||||| | ||||||| |||||||||  |||||||||    
T  14627266 tagccctatcttcttagttatatgaatcagtcatgctttttaattgactactagccctatctattaaatttgaactaataattctgtttggctttacata 14627365  T
Q  309 ttaagatagagatagaaaattgtgagttatgacttagggattaacgaac 357  Q
    | ||| || | |||| || ||| ||||||||||||   |||||||||||    
T  14627366 tgaagctacatataggaagttgcgagttatgactttatgattaacgaac 14627414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 13331806 - 13331924
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgt--gtatga 204  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| | |||| |||||| |||||| ||||| ||| |||||  ||||||    
T  13331806 agcatgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcataattatttgtgcttaatgcttttcttatgattgttcgtatga 13331905  T
Q  205 ctactagctctaacttctt 223  Q
    |||||| | ||| ||||||    
T  13331906 ctactaaccctagcttctt 13331924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 9466845 - 9466963
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatga 204  Q
    ||||||||||||||||||||||||||| |||||||||| ||| | | |||||||| | |||| |||||| |||||| ||||| ||| ||||  |||||||    
T  9466845 agcatgtaatttgttaagaactctctttgacatcaatgaaaaaccagtctttattcataattatttgtgcttaatgcttttcttatgattgtttgtatga 9466944  T
Q  205 ctactagctctaacttctt 223  Q
    |||||| | ||||||||||    
T  9466945 ctactaaccctaacttctt 9466963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 521 - 638
Target Start/End: Original strand, 14627484 - 14627598
Alignment:
Q  521 agaggattcgaaagcttgttcatctattttaatctaattttcaaaccaatttaattaccgtgtaataagtttaatgcaaccaatccaactttgcctaggg 620  Q
    ||||| || ||| ||||| |||||| ||||||||||||||| ||||||||||| ||||  | | ||||||||| ||||||||| |||||  |||||||||    
T  14627484 agagggtttgaaggcttgatcatctgttttaatctaatttttaaaccaatttatttacattattataagtttattgcaaccaaaccaac--tgcctaggg 14627581  T
Q  621 caaccacccaatttaaca 638  Q
    ||||| |||| |||||||    
T  14627582 caacc-cccattttaaca 14627598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 388 - 578
Target Start/End: Original strand, 13332091 - 13332284
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa--cattga 485  Q
    ||||||| |||| || |||||||||||||||  ||| |||||||| |||||||||||||| | |  ||||||  ||||||||| ||||  ||    ||||    
T  13332091 ttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatttgtcgtaaagctaggttaattttttga 13332190  T
Q  486 gagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaatttaattac 578  Q
    |||||||||| |  |||||| | || ||| |||| ||||||||||||| ||||| |||| | |||||||  |||| |||||||| |||| ||||    
T  13332191 gagagaagagaacaaaattactcacggtgagcaatagaggattcgaaaggcttgatcatatgttttaattcaattatcaaaccattttatttac 13332284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 27863670 - 27863588
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    ||||||| |||| || |||||||||||||||  ||| |||||||| ||||||||||||||||||  ||||||  |||||||||    
T  27863670 ttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaactatttagttaatttgtcgtaaag 27863588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 659 - 815
Target Start/End: Complemental strand, 12575387 - 12575231
Alignment:
Q  659 ttgttgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgataga-ttagatacatttgtcaaatacctattaagtttttggcg 757  Q
    ||||||||||||| |||||||| |  || ||||||||||||| | ||||||||||||| || || | |||| ||| ||||||  ||| ||||||||||||    
T  12575387 ttgttgagtagaagttaacaacagtcctcgtggatacgaattat-ttattacttcgattgaatttggtacacttgccaaatatttatcaagtttttggcg 12575289  T
Q  758 ccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    ||||||  |||||| ||| ||| ||||| ||  | |||||| ||||||| ||| ||||    
T  12575288 ccgttgctggggactgttaaattatttcaacgaggcaatttcgttattatttacgatt 12575231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 815
Target Start/End: Complemental strand, 22173705 - 22173631
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| |||||||||||||||||| ||||||| ||||| ||||||| | |||  ||||||||| ||| ||||||||    
T  22173705 ctatcaagtttttggcgccgttgccggggactgttgagtcatttcaatttggtaattttgtttttatttaggatt 22173631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 791
Target Start/End: Original strand, 31981704 - 31981754
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttg 791  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||| |||||    
T  31981704 ctatcaagtttttggcgccgctgtcggggactgttgaatcatttcaacttg 31981754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 5827746 - 5827835
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgt 198  Q
    |||||| ||||||||||| ||||||  ||||||| | ||||||| |||||||| |||||| |||||||| | || ||||| ||| |||||    
T  5827746 catgtagtttgttaagaattctcttttacatcaaagaaaacctagtctttattcagaattatttgtgttcattgcttttcttatgattgt 5827835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 5964275 - 5964341
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||| ||| |||||||| |||||||||||| ||| |  ||||||  |||||||||    
T  5964275 ttataacttaggaaatggttttgagtcaagagattgatcaaatctacttagttaatttgtcgtaaag 5964341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 668 - 718
Target Start/End: Original strand, 9467350 - 9467400
Alignment:
Q  668 agaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||||||||||||||  || ||||||||||| ||||||| |||||||||||    
T  9467350 agaaattaacaacggtcctcgtggatacgaactttattactacttcgatag 9467400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Original strand, 12583370 - 12583444
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||||||||||||| || | ||||| ||| ||||||||  ||||| |||||||||| ||| ||||||||    
T  12583370 ctatcaagtttttggcgccgctgccagggactgttaaatcatttaaacttggcaattttgtttttatttaggatt 12583444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 14188020 - 14188086
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  14188020 ttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 14188086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 22654281 - 22654347
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||| ||||||||  ||| |||||||| |||||||||||||||| |  |||||| ||||||||||    
T  22654281 ttataatttaggaaagggttttgagtcaagagattgatcaaaactacttagttaattcgtcgtaaag 22654347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 718
Target Start/End: Original strand, 453869 - 453922
Alignment:
Q  665 agtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    ||||||||||||||||||  || ||||||||||| ||||||| |||||| ||||    
T  453869 agtagaaattaacaacggtcctcgtggatacgaactttattagtacttccatag 453922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 785
Target Start/End: Original strand, 24435338 - 24435423
Alignment:
Q  700 tttattattacttcgatagattagatacatttgtcaaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttc 785  Q
    ||||||| |||||||||||  | | |||| ||| ||| || |||| ||||||||||||||| || ||||||| ||||||| |||||    
T  24435338 tttattactacttcgatagtattggtacacttgccaattatctatcaagtttttggcgccgctgccggggactgttgaattatttc 24435423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 3e-32; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 109 - 573
Target Start/End: Original strand, 33898045 - 33898516
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgact 206  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| ||||  |||||||||    
T  33898045 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgact 33898144  T
Q  207 actagctctaacttctt--agttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaacttta 304  Q
    |||| | ||| ||||||  | |   || ||||||| ||||   || | |||||||||  | ||||| ||||   | || || | ||||||||||| |  |    
T  33898145 actaaccctagcttctttcaatcacataaattgatgttaggaattgaatgactactaaccctagcttttaatcttgaattagtaattctgtttaattcaa 33898244  T
Q  305 catattaagatagagatagaaaattgtgagttatgacttagggattaacgaactaaagattgcttccgcaatta-ggaatgaacttaagagtttaagata 403  Q
    ||||  ||  |||||||||||||||| ||||||||| ||| | ||||||| ||| |  | |||||||||| |||   |||    ||||||| |||| |      
T  33898245 cataggaacctagagatagaaaattgagagttatgaattatgaattaacgtactcacca-tgcttccgcagttattcaatcggtttaagagattaaaagg 33898343  T
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa--cattgagagagaagaggaacaa 501  Q
    |||||||||||||||  ||| |||||||| |||||||||||||| | |  ||||||||||||||||| ||||  ||    ||||||||||||||   |||    
T  33898344 ttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtcgtaaagctaggttaatttcttgagagagaagagaggcaa 33898443  T
Q  502 attatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    |||| | |||||| |||| ||||||||||||| | ||| |||||| |||||||| |||| |||||||| ||||    
T  33898444 attactcacagtgagcaatagaggattcgaaaggattgatcatctgttttaatccaattatcaaaccatttta 33898516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 665 - 816
Target Start/End: Original strand, 49716653 - 49716805
Alignment:
Q  665 agtagaaattaacaacggctcttgtggatacgaattttattattacttcgatagatta-gatacatttgtcaaatacctattaagtttttggcgccgttg 763  Q
    ||||||||||||||||||  || ||||||||||| ||||||||||||||||||| ||  | |||| ||||||| || |||| ||||||||||||||  ||    
T  49716653 agtagaaattaacaacggtcctcgtggatacgaactttattattacttcgatagtttttggtacacttgtcaattatctatcaagtttttggcgccactg 49716752  T
Q  764 tcggggacggttgaatcatttcgacttgacaattttgttattagttaggattc 816  Q
     ||||||| ||||||||||||| ||||| |||||||||| ||| |||||||||    
T  49716753 ccggggactgttgaatcatttcaacttggcaattttgtttttatttaggattc 49716805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 664 - 815
Target Start/End: Original strand, 13493425 - 13493577
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatagatta-gatacatttgtcaaatacctattaagtttttggcgccgtt 762  Q
    |||||||||||||||||||  || ||||||||||| ||||||| ||||||||||| ||  | |||| ||| |||||| |||| ||||||||||||||| |    
T  13493425 gagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatagcttttggtacacttgccaaatatctatcaagtttttggcgccgct 13493524  T
Q  763 gtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    | ||||||| ||||||| ||||| |||||  ||||| ||||||| ||||||||    
T  13493525 gccggggactgttgaattatttcaacttggtaatttcgttattatttaggatt 13493577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 107 - 223
Target Start/End: Original strand, 18392110 - 18392228
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatga 204  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| ||||  |||||||    
T  18392110 agcatgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgcttaatggttttcttatgattgtttgtatga 18392209  T
Q  205 ctactagctctaacttctt 223  Q
    |||||| | ||| ||||||    
T  18392210 ctactaaccctagcttctt 18392228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 107 - 210
Target Start/End: Complemental strand, 34553085 - 34552980
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatga 204  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||  ||| ||||  |||||||    
T  34553085 agcatgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgcttaatgttttttttatgattgtttgtatga 34552986  T
Q  205 ctacta 210  Q
    ||||||    
T  34552985 ctacta 34552980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 23441683 - 23441567
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgact 206  Q
    |||||||||||||||||||||| || ||| |||||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| ||||  |||||||||    
T  23441683 catgtaatttgttaagaactctttttgacttcaatgaaaacctagtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgact 23441584  T
Q  207 actagctctaacttctt 223  Q
    |||| | ||| ||||||    
T  23441583 actaaccctagcttctt 23441567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 197
Target Start/End: Complemental strand, 50197400 - 50197227
Alignment:
Q  17 atttctatgttgttaattgttttggttatgagtagctaagcttttagattcactaagccatgagataaatatgttgtaatcaatgagcatagcatgtaat 116  Q
    ||||||||||  |||||||||| | ||||||||| |||| || ||||||| | ||||||||||||| ||| | |||| |||| ||     ||||||||||    
T  50197400 atttctatgtatttaattgtttag-ttatgagtaactaaactcttagattgattaagccatgagatgaatct-ttgtgatcagtg-----agcatgtaat 50197308  T
Q  117 ttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg 197  Q
    ||||||||||||| ||| |||||||||| ||||||| |||||||  |||||| |||||| | |||| ||||| ||| ||||    
T  50197307 ttgttaagaactccctttgacatcaatgaaaacctagtctttatacagaattatttgtgctcaatgcttttcttatgattg 50197227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 404 - 744
Target Start/End: Complemental strand, 34552784 - 34552440
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    ||||||||| |||||  ||| |||||||| |||||||||||||| | |  ||||||  ||||||||| ||||  ||   | || |||||||||||   ||    
T  34552784 ttataactttggaaagggttttgagtcaagagattgatcaaaaccacttagttaatttgtcgtaaagctaggttaatttctttaagagagaagagaggca 34552685  T
Q  501 aattatttacagtgcgcaacagaggattcgaaag-cttgttcatctattttaatctaattttcaaaccaatttaattaccgtgtaataagtttaatgcaa 599  Q
    ||||| | || ||| |||| |||||||||||||| |||| ||||||  ||||||| |||| |||||||| |||| ||||  |||  || |||| ||  ||    
T  34552684 aattactcacggtgagcaatagaggattcgaaaggcttgatcatctgctttaatccaattatcaaaccattttatttactttgtt-tacgttttataaaa 34552586  T
Q  600 ccaa-tccaactttgcctagggcaaccacccaa--tttaacatatccttgaagttaacaaaattgttgagtagaaattaacaacggctcttgtggatacg 696  Q
    |||| |||||||  ||||||||||||| |  ||  ||||  | |||||| |  |||||||| ||| | ||||||||||||||||||  || |||||||||    
T  34552585 ccaaatccaact--gcctagggcaaccccataaaatttactacatcctttattttaacaaacttgctaagtagaaattaacaacggtcctcgtggatacg 34552488  T
Q  697 aattttattattacttcgatagattagatacatttgtcaaatacctat 744  Q
    || ||||||| ||||||||||| || | |||| |||||||||| ||||    
T  34552487 aactttattactacttcgatagttttggtacacttgtcaaatatctat 34552440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 404 - 573
Target Start/End: Complemental strand, 50197059 - 50196886
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||  ||| |||||||| |||||||||||||| |||  ||||||||||||||||| ||||  ||   | ||||||||||||||   ||    
T  50197059 ttataacttaggaaagggttttgagtcaagagattgatcaaaaccatttagttaatccgtcgtaaagctaggttaatttctttgagagagaagagaggca 50196960  T
Q  501 aattatttacagtgcgcaacagaggattcgaaag-cttgttcatctattttaatctaattttcaaaccaattta 573  Q
    ||||| | ||| || |||| |||| ||| ||||| |||| |||||| |||||||| |||| |||||||| ||||    
T  50196959 aattactcacattgagcaatagagtatttgaaagtcttgatcatctgttttaatccaattatcaaaccatttta 50196886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 6195535 - 6195640
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatga 204  Q
    |||||||||||||||| |||| ||||| |||||| ||| ||||||| |||||||| |||||| |||||| |||| | ||||| ||| ||||  |||||||    
T  6195535 agcatgtaatttgttacgaacgctctttgacatcgatgaaaacctagtctttattcagaattatttgtgcttaacgcttttcttatgattgtttgtatga 6195634  T
Q  205 ctacta 210  Q
    ||||||    
T  6195635 ctacta 6195640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 718
Target Start/End: Original strand, 18392410 - 18392728
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||  ||| |||||||| |||||||||||||| | |  ||||||  ||||||||| ||||  ||   | |||||||||||||    ||    
T  18392410 ttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatttgtcgtaaagctaggttaatttctttgagagagaagataggca 18392509  T
Q  501 aattatttacagtgcgcaacagaggattcgaaag-cttgttcatctattttaatctaattttcaaaccaatttaattaccgtgtaataagtttaatgcaa 599  Q
    ||||| | |  ||| |||| |||||||||||||| |||| |||||| |||||||| |||| |||||||| |||| ||||  |||  || |||| ||  ||    
T  18392510 aattactcatggtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaaccattttatttactttgtt-tacgttttataaaa 18392608  T
Q  600 ccaa-tccaactttgcctagggcaaccacccaa--tttaacatatccttgaagttaacaaaattgttgagtagaaattaacaacggctcttgtggatacg 696  Q
    |||| |||||||  | ||||||||||| |  ||  ||||  | |||||| |  |||||||| ||| | ||||||||||||||||||  || |||||||||    
T  18392609 ccaaatccaact--ggctagggcaaccccataaaatttactagatcctttattttaacaaacttgctaagtagaaattaacaacggtcctcgtggatacg 18392706  T
Q  697 aattttattattacttcgatag 718  Q
    || ||||||| |||||||||||    
T  18392707 aactttattactacttcgatag 18392728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 746 - 815
Target Start/End: Complemental strand, 22456488 - 22456419
Alignment:
Q  746 aagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||||||||||||||||| ||||||| ||||||||||||| |||||  ||||| ||||||| ||||||||    
T  22456488 aagtttttggcgccgttgccggggactgttgaatcatttcaacttggtaatttcgttattatttaggatt 22456419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 650 - 717
Target Start/End: Original strand, 6206149 - 6206216
Alignment:
Q  650 ttaacaaaattgttgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgata 717  Q
    ||||| || ||||| |||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||    
T  6206149 ttaacgaacttgttaagtagaaattaacaacggttctcgtggatacgaactttattactacttcgata 6206216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 207 - 318
Target Start/End: Complemental strand, 13795300 - 13795189
Alignment:
Q  207 actagctctaacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttaca 306  Q
    |||||| ||| ||||||| || ||||||| ||| ||||| |||||||||||||||  |||| ||||||||| | | ||||| | | |||||||||| |||    
T  13795300 actagccctagcttcttaattatatgaatcgattttagaatttaattgactactaaccatatctgttaaatatgacctaataaatatgtttaacttaaca 13795201  T
Q  307 tattaagataga 318  Q
    ||||||| ||||    
T  13795200 tattaagctaga 13795189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 199
Target Start/End: Complemental strand, 3088189 - 3088040
Alignment:
Q  43 tatgagtagctaagcttttagattcactaagccatgagataaatatgttgtaatcaatgagcatagcatgtaatttgttaagaactctcttcgacatcaa 142  Q
    ||||||||| |||||||||||||| | ||||||||||||| ||| |  ||||||   |||||||     ||||||||||||||||||| || ||||||||    
T  3088189 tatgagtagttaagcttttagattgattaagccatgagatgaattt--tgtaatgtgtgagcat-----gtaatttgttaagaactctatttgacatcaa 3088097  T
Q  143 tggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgtg 199  Q
    |  ||||| | |||||||| | |||| | |||| |||||| ||||| ||| ||||||    
T  3088096 taaaaacccagtctttattcataattatctgtgcttaatgcttttcttatgattgtg 3088040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 665 - 718
Target Start/End: Original strand, 49720135 - 49720188
Alignment:
Q  665 agtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    ||||||||||||||||||  || ||||||||||| |||||||||||||||||||    
T  49720135 agtagaaattaacaacggtcctcgtggatacgaactttattattacttcgatag 49720188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 664 - 718
Target Start/End: Original strand, 10765082 - 10765136
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||||||||||||||||||  || ||||||||||| ||||||| |||||||||||    
T  10765082 gagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatag 10765136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 664 - 718
Target Start/End: Original strand, 13496150 - 13496204
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||||||||||||||||||  || ||||||||||||||  |||||||||||||||    
T  13496150 gagtagaaattaacaacggtcctcgtggatacgaatttatttattacttcgatag 13496204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 49719857 - 49719939
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    ||||||| |||| | ||||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  49719857 ttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 49719939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 28918377 - 28918438
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaacta 449  Q
    ||||||| |||| | ||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  28918377 ttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaacta 28918438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 49716375 - 49716436
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaacta 449  Q
    ||||||| |||| | ||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  49716375 ttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaacta 49716436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 475
Target Start/End: Complemental strand, 3087825 - 3087754
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttagg 475  Q
    ||||||||||| ||| |||| |||||| | |||||||||||||| | |  ||||||||||||||||| ||||    
T  3087825 ttataacttagtaaagagttttgagtcgagagattgatcaaaaccacttagttaatccgtcgtaaagctagg 3087754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 411 - 505
Target Start/End: Complemental strand, 5317941 - 5317847
Alignment:
Q  411 ttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagaggaacaaatta 505  Q
    |||||||| |||| ||| |||| ||||||||||||||||||  |||||| | |||||||  |||| ||||| ||| ||| ||||||  |||||||    
T  5317941 ttaggaaaaagttttgattcaagagattgatcaaaactattttgttaattcatcgtaaaactaggtgaacaatgatagaaaagaggtgcaaatta 5317847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 17902888 - 17902822
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  17902888 ttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 17902822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 741 - 815
Target Start/End: Complemental strand, 28141858 - 28141784
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||||||||||||| || ||||||| |||||||||||||  ||||  ||||| ||||||  ||||||||    
T  28141858 ctatcaagtttttggcgccgctgccggggactgttgaatcatttcagcttggaaatttcgttattgtttaggatt 28141784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 482 - 578
Target Start/End: Original strand, 6205980 - 6206077
Alignment:
Q  482 ttgagagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaatttaattac 578  Q
    ||||||||||||||   ||||||| | || ||| |||| ||||||||| ||| ||||| |||||| |||||||| |||| |||||||| |||| ||||    
T  6205980 ttgagagagaagagagccaaattactcacggtgagcaatagaggattcaaaaggcttgatcatctgttttaatccaattatcaaaccattttatttac 6206077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 63; Significance: 6e-27; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 121 - 359
Target Start/End: Complemental strand, 468829 - 468592
Alignment:
Q  121 taagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgtgtatgactactagctctaactt 220  Q
    ||||||||||||| |||||||||| || |||| | || ||| || ||| |||||||||||||  ||| || | ||| ||||||||||||||| |||||||    
T  468829 taagaactctctttgacatcaatgaaatcctagtatt-attcagtattatttgtgtttaatgccttttatttgattatgtatgactactagccctaactt 468731  T
Q  221 cttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatattaagatagaga 320  Q
    |||  || ||| |||||| ||||||  || |||||||||||| |||| || || | |||   ||||| || ||  || |||| | |||||||| ||||||    
T  468730 cttgattatataaattgaccttagaaattgattgactactagccataactattgattctggcctaataatgctcgttgacttaatatattaagctagaga 468631  T
Q  321 tagaaaattgtgagttatgacttagggattaacgaacta 359  Q
    ||| |||||| ||||||||||||| ||||||||||||||    
T  468630 taggaaattgagagttatgacttatggattaacgaacta 468592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 429 - 576
Target Start/End: Complemental strand, 468538 - 468393
Alignment:
Q  429 tcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagaggaacaaattatttacagtgcgcaacagaggatt 528  Q
    |||| |||||||||||||||||| |||||||| ||||||||  |||| |||||||||||||  |||||| ||||||||| |||||| |||| |||  |||    
T  468538 tcaagagattgatcaaaactattgggttaatctgtcgtaaaactaggtgaacattgagaga--agaggagcaaattattcacagtgagcaatagacaatt 468441  T
Q  529 cgaaagcttgttcatctattttaatctaattttcaaaccaatttaatt 576  Q
    |||| ||||| |||| | |||||||||||| |||| ||||| ||||||    
T  468440 cgaaggcttgatcatatgttttaatctaatcttcataccaagttaatt 468393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 735 - 811
Target Start/End: Complemental strand, 118223 - 118147
Alignment:
Q  735 aaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttag 811  Q
    ||||| |||| ||||||||||||||| || ||||||| ||||||||||||| |||||  ||||| ||||||| ||||    
T  118223 aaatatctataaagtttttggcgccgctgccggggactgttgaatcatttcaacttggtaatttcgttattatttag 118147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 468925 - 468871
Alignment:
Q  21 ctatgttgttaattgttttggttatgagtagctaagcttttagattcactaagcc 75  Q
    |||||||||||||||| || |||| ||||||||||||||||||||| | ||||||    
T  468925 ctatgttgttaattgtcttagttaagagtagctaagcttttagattgattaagcc 468871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 36 - 210
Target Start/End: Complemental strand, 20152 - 19981
Alignment:
Q  36 ttttggttatgagtagctaagcttttagattcactaagccatgagataaatatgttgtaatcaatgagcatagcatgtaatttgttaagaactctcttcg 135  Q
    |||| ||||||||||||||| || ||||||| | ||||||||||||| ||| | |||| |||  ||| |    ||||||||||||||||||||||||| |    
T  20152 ttttagttatgagtagctaaactcttagattgattaagccatgagatgaatct-ttgtgatctgtgaac----catgtaatttgttaagaactctctttg 20058  T
Q  136 acatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatgactacta 210  Q
    ||||||||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| ||||  |||||||||||||    
T  20057 acatcaatgaaaacctagtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatgactacta 19981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 9e-26; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 664 - 815
Target Start/End: Original strand, 14790781 - 14790933
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatagatta-gatacatttgtcaaatacctattaagtttttggcgccgtt 762  Q
    |||||||||||||||||||  || ||||||||||| ||||||| ||||||||||| ||  | |||| ||| |||||| |||| ||||||||||||||| |    
T  14790781 gagtagaaattaacaacggtcctcgtggatacgaactttattactacttcgatagcttttggtacacttgccaaatatctatcaagtttttggcgccgct 14790880  T
Q  763 gtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    | ||||||| ||||||| ||||| |||||  ||||| ||||||| ||||||||    
T  14790881 gccggggactgttgaattatttcaacttggtaatttcgttattatttaggatt 14790933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 41 - 198
Target Start/End: Complemental strand, 35027595 - 35027443
Alignment:
Q  41 gttatgagtagctaagcttttagattcactaagccatgagataaatatgttgtaatcaatgagcatagcatgtaatttgttaagaactctcttcgacatc 140  Q
    |||||||||||||||||| ||||||| | ||||||||||||| ||| | |||| |||  ||| |    ||||||||||||||||||||||||| ||||||    
T  35027595 gttatgagtagctaagctcttagattgattaagccatgagatgaatct-ttgtgatctgtgaac----catgtaatttgttaagaactctctttgacatc 35027501  T
Q  141 aatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgt 198  Q
    |||| ||||||| |||||||| |||||| |||||| |||||| ||||| ||| |||||    
T  35027500 aatgaaaacctagtctttattcagaattatttgtgcttaatgcttttcttatgattgt 35027443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 28894882 - 28894764
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg--tgtatga 204  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||| |||||||| |||||| |||||| |||||| ||||| ||| ||||  |||||||    
T  28894882 agcatgtaatttgttaagaactctctttgacatcaataaaaacctagtctttattcagaattatttgtgcttaatgcttttcttatgattgtttgtatga 28894783  T
Q  205 ctactagctctaacttctt 223  Q
    |||||| | ||||||||||    
T  28894782 ctactaaccctaacttctt 28894764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 109 - 279
Target Start/End: Complemental strand, 28974774 - 28974605
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgtgtatgactac 208  Q
    |||||||||||||| |||||||||| |||||||||||||  ||| | || ||| ||  || ||| || |||||   ||| |||| ||| |||||||||||    
T  28974774 catgtaatttgttatgaactctctttgacatcaatggaatactagtatt-attcagttttatttatgcttaataccttttatatgattatgtatgactac 28974676  T
Q  209 tagctctaacttcttagttgtatgaattgatcttagactttaattgactactagtcatagctgttaaatct 279  Q
    || | ||||||||||| || |||||||||| |||||| |||||||||||||||| ||||||| ||||||||    
T  28974675 taaccctaacttcttaattatatgaattgaacttagaatttaattgactactagccatagctattaaatct 28974605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 404 - 698
Target Start/End: Complemental strand, 35027233 - 35026936
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||  ||| |||||||| |||||||||||||| | |  ||||||| ||||||||| ||||  ||   | ||||||||||||||   ||    
T  35027233 ttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatctgtcgtaaagctaggttaatttctttgagagagaagagaggca 35027134  T
Q  501 aattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaatttaattaccgtgtaata-agtttaatgca 598  Q
    ||||| | | |||| |||| ||||||||||||| ||||| |||||| |||||||| |||| |||||||| |||| || |||| || ||   |||| ||||    
T  35027133 aattactcatagtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaaccattttattttccgt-tattactttttattgca 35027035  T
Q  599 acc-aatccaactttgcctagggcaaccacccaatttaacatatccttgaagttaacaaaattgttgagtagaaattaacaacggctcttgtggatacga 697  Q
    ||| ||||||||  ||||||||||||||    ||||||| | |||||| |  ||||| || ||||| |||||||||||||||||   |||||||||||||    
T  35027034 accaaatccaac--tgcctagggcaacccataaatttaatacatcctttattttaacgaacttgttaagtagaaattaacaacgttccttgtggatacga 35026937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 110 - 198
Target Start/End: Complemental strand, 33679586 - 33679498
Alignment:
Q  110 atgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgt 198  Q
    |||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||||| | || ||||| ||| |||||    
T  33679586 atgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttatttagaattatttgtgttcattgcttttcgtatgattgt 33679498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 388 - 567
Target Start/End: Complemental strand, 15579031 - 15578848
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattg 484  Q
    ||||||| |||| | ||||||||||||||||  ||| |||||||| |||||||||||||| | |  |||||||||||| |||| ||||  ||   | |||    
T  15579031 ttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtcgaaaagctaggttaacttctttg 15578932  T
Q  485 agagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaacc 567  Q
    |||||||||||   ||||||| | |||||  |||| ||||||||||||| ||||| |||||| |||||||| |||| |||||||    
T  15578931 agagagaagagagccaaattactcacagtaagcaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaacc 15578848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 404 - 573
Target Start/End: Original strand, 12746827 - 12747000
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||  ||| |||||||| |||||||||||||| | |  ||||||||||||||||| ||||  ||   | ||||||||||||||   ||    
T  12746827 ttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtcgtaaagctaggttaatttctttgagagagaagagaggca 12746926  T
Q  501 aattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    ||||| | ||| || |||| |||||||| |||| ||||| |||||| |||||||| |||| |||||||| ||||    
T  12746927 aattactcacaatgagcaatagaggatttgaaaggcttgatcatctgttttaatccaattatcaaaccatttta 12747000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 12746525 - 12746614
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgt 198  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||| |||||||| |||||| |||||||| | || ||||| ||| |||||    
T  12746525 catgtaatttgttaataactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgttcattgcttttcgtatgattgt 12746614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 687 - 815
Target Start/End: Complemental strand, 28894295 - 28894166
Alignment:
Q  687 tgtggatacgaattttattattacttcgatagatta-gatacatttgtcaaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttc 785  Q
    |||||||||||| ||||||| ||||||||||| ||  | |||| |||||||||| |||| ||||||||||||||| || ||| ||| ||| |||||||||    
T  28894295 tgtggatacgaactttattactacttcgatagcttttgttacacttgtcaaatatctatcaagtttttggcgccgctgccggagactgttaaatcatttc 28894196  T
Q  786 gacttgacaattttgttattagttaggatt 815  Q
     | ||| ||||| |||| ||| ||||||||    
T  28894195 aatttggcaattgtgtttttatttaggatt 28894166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 388 - 718
Target Start/End: Complemental strand, 33679305 - 33678972
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattg 484  Q
    ||||||| |||| || |||||||||| ||||  ||| ||||| || |||||||||||||| | |  ||||||||||||||||| |||   ||   | |||    
T  33679305 ttaagagattaaaatgttataacttacgaaagggttttgagttaagagattgatcaaaaccacttagttaatccgtcgtaaagctagattaatttctttg 33679206  T
Q  485 agagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaatttaattaccgtgt 583  Q
    |||||||||||   ||||||| | |||||| |||| | || |||||||| ||||| |||||| |||||||| |||| |||| ||| |||| ||||  |||    
T  33679205 agagagaagagagccaaattactcacagtgagcaataaagaattcgaaaggcttgatcatctgttttaatccaattatcaacccattttatttactttgt 33679106  T
Q  584 aataagtttaatgcaacc-aatccaactttgcctagggcaaccacccaatttaacatatccttgaagttaacaaaattgttgagtagaaattaacaacgg 682  Q
      ||||||| ||  |||| ||||||||| | ||||||||||||    ||||| | | |||||| |  ||||| || ||||| ||||||||||||||||||    
T  33679105 -ttaagttttataaaaccaaatccaactgt-cctagggcaacccataaatttcatacatcctttattttaactaacttgttaagtagaaattaacaacgg 33679008  T
Q  683 ctcttgtggatacgaattttattattacttcgatag 718  Q
      || ||||||| ||| |||| || |||||||||||    
T  33679007 tcctcgtggatatgaactttagtactacttcgatag 33678972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 11296448 - 11296380
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtg 175  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| | |||| ||||||    
T  11296448 agcatgtaatttgttaagaactctctttgacatcaatgaaaacctattctttattcaaaattatttgtg 11296380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 388 - 573
Target Start/End: Complemental strand, 28894597 - 28894408
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattg 484  Q
    ||||||| |||| || |||||||||||||||  ||| |||||||| |||||||||||||| |    ||||||||  ||||||| ||||  ||   | |||    
T  28894597 ttaagagattaaaatgttataacttaggaaagggttttgagtcaagagattgatcaaaaccacatagttaatccaccgtaaagctaggttaatttctttg 28894498  T
Q  485 agagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    |||||||||||   ||||||| | |||||| |||| |||| |||| ||| ||||| |||||| |||||||| |||| |||||||| ||||    
T  28894497 agagagaagagaggcaaattactcacagtgagcaatagagaattcaaaatgcttgatcatctgttttaatccaattatcaaaccatttta 28894408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 15579279 - 15579209
Alignment:
Q  111 tgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaat 181  Q
    |||||||||||||||||||||||  ||||||||| || ||||||||||||| | |||| |||||| |||||    
T  15579279 tgtaatttgttaagaactctctttaacatcaatgaaaccctaatctttattcataattatttgtgcttaat 15579209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 746 - 815
Target Start/End: Complemental strand, 23842555 - 23842485
Alignment:
Q  746 aagtttttggcgccgttgtcgggg-acggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    ||||||||||||||||||| |||| || ||| ||||||||| |||||||||||||||| ||| ||||||||    
T  23842555 aagtttttggcgccgttgttgggggactgttaaatcatttcaacttgacaattttgtttttatttaggatt 23842485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 28117858 - 28117924
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||| ||| || |||||||||||||||||    
T  28117858 ttataacttaggaaagggttttgagtcaagagattgatcaaagctaataagttaatccgtcgtaaag 28117924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 664 - 717
Target Start/End: Original strand, 1838638 - 1838691
Alignment:
Q  664 gagtagaaattaacaacggctcttgtggatacgaattttattattacttcgata 717  Q
    |||||||||||||||||||  |||||||||||||||||  ||||||||||||||    
T  1838638 gagtagaaattaacaacggtccttgtggatacgaatttatttattacttcgata 1838691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 750 - 815
Target Start/End: Original strand, 32110033 - 32110098
Alignment:
Q  750 ttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||||||||||||| ||||||| ||| ||||||||| |||||| ||||| ||||||| ||||||||    
T  32110033 ttttggcgccgttgccggggactgttaaatcatttcaacttgataatttcgttattatttaggatt 32110098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 7560395 - 7560325
Alignment:
Q  284 taatgattctgtttaactttacatattaagatagagatagaaaattgtgagttatgacttagggattaacg 354  Q
    |||| |||||| |||||||||||||| ||  ||||||||| || ||| ||||||||||||||| |||||||    
T  7560395 taataattctgattaactttacatatgaaactagagataggaagttgcgagttatgacttaggaattaacg 7560325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 749 - 815
Target Start/End: Original strand, 14966582 - 14966648
Alignment:
Q  749 tttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||||||||||| |||||||||| ||| ||||||||| | ||| |||||||||| ||| ||||||||    
T  14966582 tttttggcgccgatgtcggggactgttaaatcatttcaatttggcaattttgtttttatttaggatt 14966648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 656 - 718
Target Start/End: Complemental strand, 19664756 - 19664694
Alignment:
Q  656 aaattgttgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    |||||||||||||||||| ||||||||  || |||||||| |||||  |||||||||||||||    
T  19664756 aaattgttgagtagaaataaacaacggtcctcgtggatacaaatttatttattacttcgatag 19664694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 434 - 496
Target Start/End: Complemental strand, 28974450 - 28974388
Alignment:
Q  434 agattgatcaaaactattaggttaatccgtcgtaaagttaggcgaacattgagagagaagagg 496  Q
    ||||||||||||||||||| || ||| | |||||||  |||| ||||||||||||||||||||    
T  28974450 agattgatcaaaactattaagtcaattcatcgtaaaactaggtgaacattgagagagaagagg 28974388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 3826934 - 3826873
Alignment:
Q  388 ttaagagtttaagatattataacttaggaaatagttatgagtcaaaagattgatcaaaacta 449  Q
    ||||||| |||| | ||||||||||||||||  ||| |||||||| ||||||||||||||||    
T  3826934 ttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaacta 3826873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 449
Target Start/End: Complemental strand, 7560199 - 7560154
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaacta 449  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||    
T  7560199 ttataacttaggaaagagttttgagtcaagagattgatcaaaacta 7560154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 665 - 718
Target Start/End: Original strand, 11411045 - 11411098
Alignment:
Q  665 agtagaaattaacaacggctcttgtggatacgaattttattattacttcgatag 718  Q
    ||||||||||||||| ||  || ||||||||||| |||||||||||||||||||    
T  11411045 agtagaaattaacaatggtactcgtggatacgaactttattattacttcgatag 11411098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 700 - 815
Target Start/End: Original strand, 22221920 - 22222036
Alignment:
Q  700 tttattattacttcgatagatta-gatacatttgtcaaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattt 798  Q
    ||||||| ||||||||||| ||  | |||| ||| |||||  |||| ||||||||||||||| || ||||||| ||||||||||||| ||  | ||||      
T  22221920 tttattactacttcgatagcttttggtacacttgccaaatttctatcaagtttttggcgccgctgccggggactgttgaatcatttcaacgaggcaatag 22222019  T
Q  799 tgttattagttaggatt 815  Q
    |||||||| ||||||||    
T  22222020 tgttattaattaggatt 22222036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 700 - 815
Target Start/End: Original strand, 22247755 - 22247871
Alignment:
Q  700 tttattattacttcgatagatta-gatacatttgtcaaatacctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattt 798  Q
    ||||||| ||||||||||| ||  | |||| ||| |||||  |||| ||||||||||||||| || ||||||| ||||||||||||| ||  | ||||      
T  22247755 tttattactacttcgatagcttttggtacacttgccaaatttctatcaagtttttggcgccgctgccggggactgttgaatcatttcaacgaggcaatag 22247854  T
Q  799 tgttattagttaggatt 815  Q
    |||||||| ||||||||    
T  22247855 tgttattaattaggatt 22247871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 756 - 811
Target Start/End: Original strand, 23848152 - 23848207
Alignment:
Q  756 cgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttag 811  Q
    |||||||||||||||| ||| ||||||||| ||||| |||||||||| ||| ||||    
T  23848152 cgccgttgtcggggactgttaaatcatttcaacttggcaattttgtttttatttag 23848207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 446
Target Start/End: Original strand, 2331300 - 2331342
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaa 446  Q
    |||||||||||||||| ||| |||||||| |||||||||||||    
T  2331300 ttataacttaggaaatggttttgagtcaagagattgatcaaaa 2331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 411 - 469
Target Start/End: Original strand, 6856608 - 6856666
Alignment:
Q  411 ttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaa 469  Q
    ||||||||  ||| ||| |||| ||||||||||||| ||||| ||||||||||||||||    
T  6856608 ttaggaaagggttttgaatcaagagattgatcaaaattattaagttaatccgtcgtaaa 6856666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 9313885 - 9313819
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||| ||| || |||||||| || |||||    
T  9313885 ttataacttaggaaagggttttgagtcaagagattgatcaaagctaataagttaatccttcctaaag 9313819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 663 - 717
Target Start/End: Original strand, 15535217 - 15535271
Alignment:
Q  663 tgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgata 717  Q
    ||||||||| ||||||||||  || ||||||||||||||  ||||||||||||||    
T  15535217 tgagtagaagttaacaacggtcctcgtggatacgaatttatttattacttcgata 15535271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 34502361 - 34502427
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  34502361 ttataacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaag 34502427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 60; Significance: 4e-25; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 28978 - 29129
Alignment:
Q  41 gttatgagtagctaagcttttagattcactaagccatgagataaatatgttgtaatcaatgagcatagcatgtaatttgttaagaactctcttcgacatc 140  Q
    ||||||||||||||| || ||||||| | ||||||||||||| ||| | |||| |||  ||| |    ||||||||||||||||||||||||| ||||||    
T  28978 gttatgagtagctaaactcttagattgattaagccatgagatgaatct-ttgtgatctgtgaac----catgtaatttgttaagaactctctttgacatc 29072  T
Q  141 aatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattg 197  Q
    |||| ||||||| |||||||| |||||| |||||||| || ||||||||||| ||||    
T  29073 aatgaaaacctagtctttattcagaattatttgtgttcaaagattttcatatgattg 29129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 52838 - 52927
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgt 198  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| |||||||| || | ||||| ||| |||||    
T  52838 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgttcaaagcttttcgtatgattgt 52927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 485 - 573
Target Start/End: Original strand, 42703 - 42792
Alignment:
Q  485 agagagaagaggaacaaattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    |||||||||||   ||||||| | |||||| |||| ||||||||||||| ||||| |||||| |||||||| |||| |||||||| ||||    
T  42703 agagagaagagaggcaaattactcacagtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaaccatttta 42792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 56; Significance: 9e-23; HSPs: 2)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 404 - 573
Target Start/End: Original strand, 4277 - 4450
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaaca 500  Q
    |||||||||||||||  ||| ||||||||||||||||||||||| | |  ||||||||||| ||||| ||||  ||   | |||||||||||||    ||    
T  4277 ttataacttaggaaagggttttgagtcaaaagattgatcaaaaccacttagttaatccgtcataaagctaggttaatttctttgagagagaagacaggca 4376  T
Q  501 aattatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    ||||| |||||||| |||| ||||||||||||| ||||| |||||| |||||||| |||| |||||||| ||||    
T  4377 aattacttacagtgagcaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaaccatttta 4450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 3978 - 4046
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtgtt 177  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| ||||||||    
T  3978 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtgtt 4046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 41 - 573
Target Start/End: Original strand, 13248 - 13783
Alignment:
Q  41 gttatgagtagctaagcttttagattcactaagccatgagataaatatgttgtaatcaatgagcatagcatgtaatttgttaagaactctcttcgacatc 140  Q
    ||||||||||||||| || ||||||| | ||||||||||||| ||| | |||| |||  ||| |    ||||||||||||||||||||||||| ||||||    
T  13248 gttatgagtagctaaactcttagattgattaagccatgagatgaatct-ttgtgatctgtgaac----catgtaatttgttaagaactctctttgacatc 13342  T
Q  141 aatggaaacctaatctttatttagaattgtttgtgtttaatgattttcatataattgtgt--atgactactagctctaacttctt--agttgtatgaatt 236  Q
    |||| ||||||| |||||||| |||||| |||||||| | || ||||  ||||||||| |  ||||||| || | ||||||||||  | |   || ||||    
T  13343 aatgaaaacctagtctttattcagaattatttgtgttcattgctttttgtataattgtttgcatgactattaaccctaacttctttcaatcacataaatt 13442  T
Q  237 gatcttagactttaattgactactagtcatagctgttaaatctaaactaatgattctgtttaactttacatattaagatagagatagaaaattgtgagtt 336  Q
    ||||||||   |||| |||||||||  | ||||| ||||  || || || | ||||| ||||| |  |||||  ||  ||||||||| |||||| |||||    
T  13443 gatcttaggaattaaatgactactaaccctagcttttaatcctgaaatagtaattctatttaattcaacataggaacctagagataggaaattgagagtt 13542  T
Q  337 atgacttagggattaacgaactaaagattgcttccgcaattagg-aatgaacttaagagtttaagatattataacttaggaaatagttatgagtcaaaag 435  Q
    |||||||| | |||| ||  || |  || |||||| |  |||   |||    ||||||| |||| |   ||||||||||||||  ||| |||||||| ||    
T  13543 atgacttatgaattagcgttctgac-atagcttccacggttattcaatcggtttaagagattaaaagggtataacttaggaaagggttttgagtcaatag 13641  T
Q  436 attgatcaaaactattaggttaatccgtcgtaaagttaggcgaa---cattgagagagaagaggaacaaattatttacagtgcgcaacagaggattc-ga 531  Q
    |||||||||||| | |  ||||||||||||||||| ||||  ||   | ||||||||||||||   ||||||| | | |||| |||| ||||||||| ||    
T  13642 attgatcaaaaccacttagttaatccgtcgtaaagctaggttaatttctttgagagagaagagaggcaaattactcatagtgagcaatagaggattcgga 13741  T
Q  532 aagcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    | ||||| |||||| |||||||| |||| |||||||| ||||    
T  13742 aggcttgatcatctgttttaatccaattatcaaaccatttta 13783  T

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Target: scaffold0007 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 404 - 573
Target Start/End: Original strand, 92451 - 92623
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaagttaggcgaa--cattgagagagaagaggaacaa 501  Q
    |||||||||||||||  ||| |||||||| |||||||||||||| | |  ||||||||||||||||| ||||  ||    ||||||||||||||   |||    
T  92451 ttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatccgtcgtaaagctaggttaatttcttgagagagaagagaggcaa 92550  T
Q  502 attatttacagtgcgcaacagaggattcgaaa-gcttgttcatctattttaatctaattttcaaaccaattta 573  Q
    |||| | ||||||  ||| ||||||||||||| ||||| |||||| |||||||| |||| |||||||| ||||    
T  92551 attactcacagtgaacaatagaggattcgaaaggcttgatcatctgttttaatccaattatcaaaccatttta 92623  T

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Target: scaffold0911 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0911
Description:

Target: scaffold0911; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 4284 - 4350
Alignment:
Q  109 catgtaatttgttaagaactctcttcgacatcaatggaaacctaatctttatttagaattgtttgtg 175  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||| ||||||    
T  4284 catgtaatttgttaagaactctctttgacatcaatgaaaacctagtctttattcagaattatttgtg 4350  T

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Target: scaffold0352 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 651 - 815
Target Start/End: Complemental strand, 2714 - 2550
Alignment:
Q  651 taacaaaattgttgagtagaaattaacaacggctcttgtggatacgaattttattattacttcgatagattagatacatttgtcaaatacctattaagtt 750  Q
    |||| |||||| ||||||||| ||||||||||  || ||||||||||  ||  ||||||||||||||| || | | || ||| |||||  | || |||||    
T  2714 taacgaaattgctgagtagaagttaacaacggtcctcgtggatacgatcttatttattacttcgatagttttggtccacttgccaaatctccatcaagtt 2615  T
Q  751 tttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| ||||| || ||||| | ||||||| ||||| ||  | |||||||||||||| ||||||||    
T  2614 tttgacgccgctgccggggtctgttgaattatttcaacgaggcaattttgttattatttaggatt 2550  T

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Target: scaffold2047 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold2047
Description:

Target: scaffold2047; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 746 - 815
Target Start/End: Complemental strand, 535 - 466
Alignment:
Q  746 aagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||||||||||||||||| |||||||  |||||||||||| |||||  ||||| ||||||| ||||||||    
T  535 aagtttttggcgccgttgccggggactattgaatcatttcaacttggtaatttcgttattatttaggatt 466  T

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Target: scaffold0637 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 1976 - 2027
Alignment:
Q  107 agcatgtaatttgttaagaactctcttcgacatcaatggaaacctaatcttt 158  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||| |||||    
T  1976 agcatgtaatttgttaagaactctctttgacataaatgaaaacctattcttt 2027  T

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Target: scaffold0214 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 20074 - 20140
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  20074 ttataacttaggaaagagttttgagtcaagagattgatcaaaactaatttgttaatttgtcgtaaag 20140  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 741 - 791
Target Start/End: Original strand, 224063 - 224113
Alignment:
Q  741 ctattaagtttttggcgccgttgtcggggacggttgaatcatttcgacttg 791  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||| |||||    
T  224063 ctatcaagtttttggcgccgctgtcggggactgttgaatcatttcaacttg 224113  T

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Target: scaffold0068 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 744
Target Start/End: Complemental strand, 33811 - 33732
Alignment:
Q  665 agtagaaattaacaacggctcttgtggatacgaattttattattacttcgatagattagatacatttgtcaaatacctat 744  Q
    ||||||||||||||||||  || |||||||| || ||||||| ||||||||||| || | |||| ||| |||||| ||||    
T  33811 agtagaaattaacaacggtcctcgtggatacaaactttattactacttcgatagttttggtacacttgccaaatatctat 33732  T

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Target: scaffold0360 (Bit Score: 31; Significance: 0.00000008; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 404 - 470
Target Start/End: Original strand, 2472 - 2538
Alignment:
Q  404 ttataacttaggaaatagttatgagtcaaaagattgatcaaaactattaggttaatccgtcgtaaag 470  Q
    |||||||||||||||  ||| |||||||| |||||||||||||||| |  ||||||  |||||||||    
T  2472 ttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaag 2538  T

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Target: scaffold0360; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 746 - 815
Target Start/End: Original strand, 2802 - 2871
Alignment:
Q  746 aagtttttggcgccgttgtcggggacggttgaatcatttcgacttgacaattttgttattagttaggatt 815  Q
    |||| |||||||| | || ||||||| ||||||||||||| ||||| |||||||||| ||  ||||||||    
T  2802 aagtatttggcgctgctgccggggactgttgaatcatttcaacttggcaattttgtttttgtttaggatt 2871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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