View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13787_low_13 (Length: 455)

Name: NF13787_low_13
Description: NF13787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13787_low_13
NF13787_low_13
[»] chr8 (17 HSPs)
chr8 (59-438)||(29585350-29585731)
chr8 (11-191)||(17477920-17478100)
chr8 (28-250)||(4427604-4427826)
chr8 (282-368)||(18324064-18324150)
chr8 (283-369)||(25149365-25149451)
chr8 (284-368)||(23976219-23976302)
chr8 (282-369)||(37543918-37544005)
chr8 (284-364)||(31253977-31254055)
chr8 (297-369)||(21184365-21184436)
chr8 (294-369)||(21124393-21124468)
chr8 (286-369)||(22426912-22426995)
chr8 (314-369)||(41358840-41358895)
chr8 (294-364)||(21124430-21124500)
chr8 (282-369)||(4289051-4289138)
chr8 (141-179)||(4441642-4441680)
chr8 (290-364)||(31254007-31254081)
chr8 (223-275)||(17477836-17477888)
[»] chr5 (13 HSPs)
chr5 (63-257)||(8340909-8341103)
chr5 (282-369)||(10760133-10760220)
chr5 (282-369)||(30100737-30100824)
chr5 (280-369)||(2555505-2555594)
chr5 (284-368)||(30852646-30852730)
chr5 (282-369)||(11298025-11298112)
chr5 (282-369)||(13753355-13753442)
chr5 (282-369)||(17497061-17497148)
chr5 (284-369)||(21943871-21943956)
chr5 (304-364)||(10760123-10760183)
chr5 (282-357)||(19491750-19491825)
chr5 (299-368)||(12895595-12895664)
chr5 (332-369)||(17497171-17497208)
[»] chr7 (16 HSPs)
chr7 (282-369)||(27508642-27508729)
chr7 (282-369)||(38761118-38761205)
chr7 (282-367)||(45012974-45013059)
chr7 (282-369)||(6441470-6441557)
chr7 (282-368)||(5080235-5080321)
chr7 (282-365)||(14197585-14197668)
chr7 (282-358)||(37787813-37787889)
chr7 (290-364)||(27508679-27508753)
chr7 (290-369)||(43257366-43257445)
chr7 (290-364)||(5080211-5080285)
chr7 (285-369)||(3404524-3404607)
chr7 (282-337)||(14197617-14197672)
chr7 (294-356)||(38761098-38761160)
chr7 (290-364)||(45012950-45013024)
chr7 (332-369)||(15272389-15272426)
chr7 (308-364)||(6441464-6441520)
[»] chr3 (18 HSPs)
chr3 (282-369)||(48755393-48755480)
chr3 (282-368)||(15031255-15031341)
chr3 (282-369)||(1426550-1426637)
chr3 (282-353)||(11989171-11989242)
chr3 (282-369)||(14434766-14434853)
chr3 (281-368)||(15005025-15005112)
chr3 (282-368)||(21514811-21514897)
chr3 (281-367)||(33343074-33343159)
chr3 (282-369)||(18445531-18445618)
chr3 (290-369)||(26498650-26498729)
chr3 (282-364)||(15031291-15031373)
chr3 (283-368)||(43562727-43562812)
chr3 (290-364)||(15031323-15031397)
chr3 (332-369)||(20759103-20759140)
chr3 (308-364)||(1426587-1426643)
chr3 (304-364)||(33343108-33343168)
chr3 (313-369)||(38498201-38498257)
chr3 (329-369)||(42453109-42453149)
[»] chr1 (7 HSPs)
chr1 (282-369)||(50335507-50335594)
chr1 (282-369)||(37608038-37608125)
chr1 (282-369)||(13735511-13735598)
chr1 (282-338)||(32374092-32374148)
chr1 (282-369)||(8097841-8097928)
chr1 (293-364)||(50335544-50335615)
chr1 (290-364)||(37608075-37608149)
[»] chr4 (30 HSPs)
chr4 (282-368)||(30470944-30471030)
chr4 (281-367)||(2634149-2634235)
chr4 (282-369)||(18830700-18830787)
chr4 (282-369)||(47943574-47943661)
chr4 (282-369)||(55382682-55382769)
chr4 (281-368)||(1387467-1387555)
chr4 (280-368)||(5448263-5448351)
chr4 (282-369)||(10380721-10380808)
chr4 (282-369)||(3370031-3370118)
chr4 (282-369)||(9826698-9826785)
chr4 (282-361)||(18836405-18836483)
chr4 (282-336)||(10757696-10757750)
chr4 (282-336)||(10970867-10970921)
chr4 (280-364)||(1387402-1387486)
chr4 (284-368)||(2063213-2063297)
chr4 (282-369)||(11821789-11821876)
chr4 (290-369)||(22017984-22018063)
chr4 (290-364)||(18830676-18830750)
chr4 (283-369)||(37695059-37695145)
chr4 (282-364)||(47144760-47144842)
chr4 (291-364)||(10757673-10757746)
chr4 (291-364)||(10970844-10970917)
chr4 (289-369)||(30378808-30378888)
chr4 (290-361)||(18500704-18500775)
chr4 (281-368)||(2232496-2232582)
chr4 (290-361)||(10380697-10380768)
chr4 (290-364)||(2634126-2634200)
chr4 (286-368)||(5324813-5324895)
chr4 (328-373)||(2634132-2634177)
chr4 (299-368)||(8951131-8951200)
[»] scaffold0003 (2 HSPs)
scaffold0003 (284-369)||(314144-314229)
scaffold0003 (290-364)||(314181-314255)
[»] chr6 (12 HSPs)
chr6 (280-369)||(25089218-25089307)
chr6 (282-369)||(13536626-13536714)
chr6 (282-369)||(19295407-19295494)
chr6 (282-369)||(21222591-21222678)
chr6 (299-369)||(10588014-10588084)
chr6 (282-364)||(10862084-10862166)
chr6 (280-369)||(10672742-10672830)
chr6 (284-364)||(26705099-26705179)
chr6 (290-364)||(19295383-19295457)
chr6 (284-338)||(26705093-26705147)
chr6 (280-332)||(19295437-19295489)
chr6 (290-364)||(21222567-21222641)
[»] scaffold0407 (6 HSPs)
scaffold0407 (281-364)||(960-1043)
scaffold0407 (281-364)||(7424-7507)
scaffold0407 (280-369)||(991-1080)
scaffold0407 (280-369)||(7455-7544)
scaffold0407 (290-364)||(937-1011)
scaffold0407 (290-364)||(7401-7475)
[»] chr2 (11 HSPs)
chr2 (282-369)||(39598633-39598720)
chr2 (282-357)||(8219217-8219292)
chr2 (281-368)||(31499475-31499562)
chr2 (282-368)||(22092927-22093013)
chr2 (299-368)||(32092870-32092939)
chr2 (282-357)||(24007006-24007081)
chr2 (286-368)||(31819981-31820063)
chr2 (280-332)||(32092883-32092935)
chr2 (293-364)||(31820017-31820088)
chr2 (293-364)||(39598612-39598683)
chr2 (332-369)||(24006946-24006983)
[»] scaffold0102 (1 HSPs)
scaffold0102 (281-369)||(23958-24046)
[»] scaffold0066 (1 HSPs)
scaffold0066 (284-368)||(15432-15516)
[»] scaffold0024 (1 HSPs)
scaffold0024 (282-369)||(127870-127957)
[»] scaffold0026 (1 HSPs)
scaffold0026 (282-368)||(57516-57602)
[»] scaffold0049 (1 HSPs)
scaffold0049 (290-338)||(59807-59855)
[»] scaffold0011 (2 HSPs)
scaffold0011 (286-350)||(190308-190372)
scaffold0011 (290-364)||(190280-190354)
[»] scaffold1300 (1 HSPs)
scaffold1300 (282-344)||(1441-1503)
[»] scaffold0039 (1 HSPs)
scaffold0039 (280-337)||(27613-27670)


Alignment Details
Target: chr8 (Bit Score: 317; Significance: 1e-179; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 59 - 438
Target Start/End: Original strand, 29585350 - 29585731
Alignment:
Q  59 attggggaaagacatcaagatacgcttccacgactttgtgtaagttgtgcatgctgaaatcttggccaaatgtgattcgggtaatgttaaggtactcaag 158  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29585350 attggggaaagacatcaagatacgcttccacgactttgtgtaagttgtacatgctgaaatcctggccaaatgtgattcgggtaatgttaaggtactcaag 29585449  T
Q  159 atcaggcgcatttatttcaaggtaaaccccaacttcat---cctcattggcaatttccaaccttcttaaggaaggtgggacacaaactttgtccaagctt 255  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29585450 atcaggcgcatttatttcaaggtaaaccccaacttcatcatcctcattggcaatttccaaccttcttaaggaaggtgggacacaaactttgtccaagctt 29585549  T
Q  256 tgcggagaaaaactaagattagaggaagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacatt 355  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||  ||||||||||| ||||||||||||| ||||||||||||||||    
T  29585550 tgcggagaaaaactaagattagaggaagtctacattcagggactaaattgactaacaaagtctgcattcagggactaaattgaataacaaagtctacatt 29585649  T
Q  356 cagggactattttgacgactccttagctacaaacgtgactaatctccaagaaaagaaaacaattagttcaaacgttatgcatg 438  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29585650 cagggactattttgacgatttcttagctactaacgtgactaatctccaagaaaagaaaacaattagttc-aacgttatgcatg 29585731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 17478100 - 17477920
Alignment:
Q  11 cagagagagcacctagaaggttgtgtaaagggatgacagaaccaaacgattggggaaagacatcaagatacgcttccacgactttgtgtaagttgtgcat 110  Q
    ||||||||||||| || || |||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||||| || ||||| ||||| | |||    
T  17478100 cagagagagcaccaaggagattgtgtaaagcgacgacggaaccaagcgattggggaaagacatcaagatacgcttccaccacattgtgcaagttatacat 17478001  T
Q  111 gctgaaatcttggccaaatgtgattcgggtaatgttaaggtactcaagatcaggcgcatttatttcaaggtaaaccccaac 191  Q
    | ||||| ||||||| |||||||||| |||||||||||||||||||||||  || |||||||||||||||||| |||||||    
T  17478000 ggtgaaaacttggccgaatgtgattccggtaatgttaaggtactcaagattcggtgcatttatttcaaggtaagccccaac 17477920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 250
Target Start/End: Original strand, 4427604 - 4427826
Alignment:
Q  28 aggttgtgtaaagggatgacagaaccaaacgattggggaaagacatcaagatacgcttccacgactttgtgtaagttgtgcatgctgaaatcttggccaa 127  Q
    |||||||  ||||||||||| |||  |||||  ||| |||| |||| |||||  |||||||| || ||||| ||||||| |||||| ||| ||| |||      
T  4427604 aggttgttcaaagggatgacggaagaaaacggctggagaaaaacattaagatgtgcttccaccacattgtgcaagttgtacatgctaaaaacttcgccgg 4427703  T
Q  128 atgtgattcgggtaatgttaaggtactcaagatcaggcgcatttatttcaaggtaaaccccaacttcatcctcattggcaatttccaaccttcttaagga 227  Q
    ||||||||| | | |||| ||||||||||||||| || || || |||||||||||| ||||||||||||  ||| ||   |||  ||||||| | || ||    
T  4427704 atgtgattccgttgatgtaaaggtactcaagatccggtgctttcatttcaaggtaagccccaacttcattatcaatgatgattgtcaaccttttcaaaga 4427803  T
Q  228 aggtgggacacaaactttgtcca 250  Q
    ||||||||| |||||||| ||||    
T  4427804 aggtgggacgcaaactttatcca 4427826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 18324150 - 18324064
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||||||||| | ||| |||||||| ||||||||| ||||||| || |||||||||| ||| |||||||||||||||||||||||||    
T  18324150 agtctacatttaaggactaaattgactaacggagtttgcattcaggaactaaattgactaataaagtctacattcagggactatttt 18324064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 369
Target Start/End: Original strand, 25149365 - 25149451
Alignment:
Q  283 gtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||| |||||||| ||| |||| |||| |||||||||||| | ||||||||||| ||||||||||||||||||| || |||||||    
T  25149365 gtctacgttcagggactaacttgactaacagagtctgcattcagagactaaattgactaacaaagtctacattcagagattattttg 25149451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 368
Target Start/End: Original strand, 23976219 - 23976302
Alignment:
Q  284 tctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||||||||||||  ||||||||  |||||||||||||||| ||| ||||||||| ||||| || ||||||||||||||||||||    
T  23976219 tctacattcaggggctaaattgaccaacggagtctgcattcaggggctaaattgactaacagag-ctacattcagggactatttt 23976302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 37543918 - 37544005
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||| ||||||||| |||||| | ||||||| ||||||||| |||| |||||||| |||||||||||||| |||  ||||||||||    
T  37543918 agtctatattcagggactaaattaactaacggaatctgcattcagggattaaattgactaacaaagtctacaatcaatgactattttg 37544005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 31254055 - 31253977
Alignment:
Q  284 tctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||| ||||| |||||||| |||| |||||||||||| ||||||||||||| ||||  |||||||||||| ||||||    
T  31254055 tctacatttagggactaaattgactaacagagtctgcattcagggactaaattgactaac--agtctacattcatggacta 31253977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 21184436 - 21184365
Alignment:
Q  297 attaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||||||||||||||||||| |||| ||||||||||||| |||  |||| || |||||||||||||||||    
T  21184436 attaaattgattaacggagtctgtattcagggactaaattgactaa-taagtttatattcagggactattttg 21184365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 21124468 - 21124393
Alignment:
Q  294 gggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||| |||||||| ||||| ||||||||||| ||||||||||||| ||| | |||||||||| || ||||||||||    
T  21124468 gggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacatttagagactattttg 21124393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 22426995 - 22426912
Alignment:
Q  286 tacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||||||||  ||||||| |||  ||| || ||||| ||||||||||||| ||||| || |||||||||||||||||||||    
T  22426995 tacattcagggaccaaattgactaaaagagactacattcagggactaaattgactaacagagactacattcagggactattttg 22426912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 41358840 - 41358895
Alignment:
Q  314 agtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||    
T  41358840 agtctgcattcatggactaaattgattaacagagtctacattcagggactattttg 41358895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 21124500 - 21124430
Alignment:
Q  294 gggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||| |||||||| ||||||||||| || | |||||||||||||| |||| |||||| |||||||||||||    
T  21124500 gggactaaattgactaacggagtctacactaggggactaaattgactaacgaagtctgcattcagggacta 21124430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 4289051 - 4289138
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||||||||  || |||||||||||||  ||||||||||  | ||||||||||| ||||| ||||| | ||||  ||||||||||    
T  4289051 agtctacattcaaagactaaattgattaacatagtctgcatttagagactaaattgactaacatagtctgcgttcaaagactattttg 4289138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 4441680 - 4441642
Alignment:
Q  141 aatgttaaggtactcaagatcaggcgcatttatttcaag 179  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  4441680 aatgttaaggtactcaagatctggtgcatttatttcaag 4441642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 31254081 - 31254007
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||||||||||| ||| ||||  | ||| ||||  ||||||||||||| ||||| ||||| |||||||||||||    
T  31254081 ttcagggattaaagtgactaacaaaatctacatttagggactaaattgactaacagagtctgcattcagggacta 31254007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 17477888 - 17477836
Alignment:
Q  223 aaggaaggtgggacacaaactttgtccaagctttgcggagaaaaactaagatt 275  Q
    |||| ||||||||  ||||||||||| ||||||||||||||||| | ||||||    
T  17477888 aagggaggtgggatgcaaactttgtctaagctttgcggagaaaagccaagatt 17477836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 9e-37; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 63 - 257
Target Start/End: Complemental strand, 8341103 - 8340909
Alignment:
Q  63 gggaaagacatcaagatacgcttccacgactttgtgtaagttgtgcatgctgaaatcttggccaaatgtgattcgggtaatgttaaggtactcaagatca 162  Q
    ||||||||||||||||||||||||||| || ||| | ||| ||| || ||||||| ||| ||| ||||||||| |||||||||||||||| | ||||||     
T  8341103 gggaaagacatcaagatacgcttccaccacgttgggcaagctgtacaagctgaaaccttcgccgaatgtgatttgggtaatgttaaggtattgaagatcc 8341004  T
Q  163 ggcgcatttatttcaaggtaaaccccaacttcatcctcattggcaatttccaaccttcttaaggaaggtgggacacaaactttgtccaagctttg 257  Q
    |||||||||| ||| | |||| | ||||| |||| |||| |||  |||| ||||||| | |||||||| |||||||||||||| |||||||||||    
T  8341003 ggcgcatttacttccaagtaagctccaacatcattctcaatggtgattttcaaccttttcaaggaaggcgggacacaaactttatccaagctttg 8340909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 10760133 - 10760220
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| | ||| |||||||||| |||||||||||||    
T  10760133 agtctacattcagggactaaattgactaacggagtctgcattcagggactaaattgacttacagagtctacatttagggactattttg 10760220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 30100737 - 30100824
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||||| || ||||| ||| ||||||||||||| ||||||||| ||| ||||| ||||| |||||| |||||||||||    
T  30100737 agtctacattcagggactatattgactaatggagtctgcattcagggactaaagtgattaacagagtctgcattcatggactattttg 30100824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 280 - 369
Target Start/End: Complemental strand, 2555594 - 2555505
Alignment:
Q  280 gaagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||||| |||||||| ||| |||| ||||| |||||||||||   ||||||||||| ||||| ||||||||||||| ||||||||||    
T  2555594 gaagtctacgttcagggactaatttgactaacgaagtctgcattcaacgactaaattgactaacagagtctacattcagagactattttg 2555505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 368
Target Start/End: Complemental strand, 30852730 - 30852646
Alignment:
Q  284 tctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    ||||||||||| || |||||||| | ||| ||||||||||| ||||||||||||| ||||| ||| |||||||||| ||||||||    
T  30852730 tctacattcagagactaaattgacttacgaagtctgcattcagggactaaattgactaacagagtttacattcaggaactatttt 30852646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 11298112 - 11298025
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||| | |||||||| ||| ||||||||||||| | ||||||||||| ||||| ||||||  |||||||| |||||||    
T  11298112 agtctacattcaggaactaaattgactaatggagtctgcattcagagactaaattgactaacagagtctatgttcagggattattttg 11298025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 13753355 - 13753442
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||| |||||||  |||||||| ||||||||||||||||   |||||||||||| | ||| |||||||||| |||||||||||||    
T  13753355 agtctactttcaggggctaaattgactaacggagtctgcatttaaggactaaattgacttacagagtctacatttagggactattttg 13753442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 17497148 - 17497061
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||||| |||||| | |||| || |||||||||  |||||||||||| ||||| || ||||||||| |||||||||||    
T  17497148 agtctacattcagggactaaattaactaacagaatctgcattcaaggactaaattgactaacagagactacattcacggactattttg 17497061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 369
Target Start/End: Original strand, 21943871 - 21943956
Alignment:
Q  284 tctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||||||  || |||||||| ||||  ||| ||||||| ||||||||||||| ||||| |||||||||||| | |||||||||    
T  21943871 tctacattcaaagactaaattgactaacaaagtatgcattcagggactaaattgattaacagagtctacattcatgaactattttg 21943956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 10760123 - 10760183
Alignment:
Q  304 tgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||||||||||||| ||||| ||||||||||||| ||||  ||||| |||||||||||||    
T  10760123 tgattaacggagtctacattcagggactaaattgactaacggagtctgcattcagggacta 10760183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 19491825 - 19491750
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattca 357  Q
    |||||| ||||||||| |||||||||||||| ||||||||||| |  ||||| |||| ||||| ||| ||||||||    
T  19491825 agtctaaattcagggactaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacattca 19491750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 12895664 - 12895595
Alignment:
Q  299 taaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||||||| |||| |||||||||||   ||| |||||||| ||||||||||||||||| | |||||||||    
T  12895664 taaattgactaacagagtctgcatttaaggattaaattgactaacaaagtctacattcggagactatttt 12895595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 369
Target Start/End: Original strand, 17497171 - 17497208
Alignment:
Q  332 aaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||  |||||||||||||||||||||||||||||    
T  17497171 aaattgaccaacaaagtctacattcagggactattttg 17497208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 8e-28; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 27508729 - 27508642
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||||| |||||||| |||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  27508729 agtctacattcagggactaaattgactaacagagtctgcattcagggactaaattgactaacatagtctacattcagggactattttg 27508642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 38761118 - 38761205
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||| |||||||||| |||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  38761118 agtctgcattcagggactaaattgactaacagagtctgcattcgaggactaaattgattaacaaagtctacattcagggactattttg 38761205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 367
Target Start/End: Original strand, 45012974 - 45013059
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattt 367  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||    
T  45012974 agtctacattcagagattaaattgactaacggagtctgcattcagggactaaattgactaacaaactctacattcaggaactattt 45013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 6441470 - 6441557
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||| || || |||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||    
T  6441470 agtctacatttagagactaaattgactaacagagtctgcattcagggactaaattgactaacaaagtctacattcagggattattttg 6441557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 5080235 - 5080321
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| ||| | ||| ||||||||| |||||||||    
T  5080235 agtctacattcaggtactaaattgattaacggagtctgcattcagggactaaattgactaatatagtttacattcagagactatttt 5080321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 365
Target Start/End: Original strand, 14197585 - 14197668
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactat 365  Q
    |||||||||| || || |||||||| ||||||||||||||||| |||| |||||||| ||||| ||||||||||||||||||||    
T  14197585 agtctacattgagagactaaattgactaacggagtctgcattcagggattaaattgactaacagagtctacattcagggactat 14197668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 37787813 - 37787889
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcag 358  Q
    ||||||||||||  || |||||||| |||| |||| ||||||| ||||||||||||| |||||||||||||||||||    
T  37787813 agtctacattcaacgactaaattgactaacagagtatgcattcagggactaaattgactaacaaagtctacattcag 37787889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 27508753 - 27508679
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||| ||| |||| ||| ||||||||||| ||||| ||||||||||||| ||||| ||||| |||||||||||||    
T  27508753 ttcatggactaaagtgactaacggagtctacattcagggactaaattgactaacagagtctgcattcagggacta 27508679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 369
Target Start/End: Original strand, 43257366 - 43257445
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||| |||||||| ||||| ||||| ||||  ||||||||||||| ||||| |||||| ||||| ||| |||||||    
T  43257366 ttcagggagtaaattgactaacgaagtctacatttagggactaaattgactaacagagtctatattcaaggattattttg 43257445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 5080211 - 5080285
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||| ||| |||| ||||||||||||||| ||||| || |||||||||| ||||  ||||| |||||||||||||    
T  5080211 ttcaaggactaaaatgattaacggagtctacattcaggtactaaattgattaacggagtctgcattcagggacta 5080285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 369
Target Start/End: Complemental strand, 3404607 - 3404524
Alignment:
Q  285 ctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||| ||||||| |||||||| |||| ||| |||||||  ||||||||||||| ||||| ||| |||||||| |||||| ||||    
T  3404607 ctacactcagggactaaattgactaacagag-ctgcatttagggactaaattgactaacagagtgtacattcatggactactttg 3404524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 337
Target Start/End: Original strand, 14197617 - 14197672
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattg 337  Q
    ||||| ||||||||||||||||||| |||| |||||| ||||| ||||||| ||||    
T  14197617 agtctgcattcagggattaaattgactaacagagtctacattcagggactatattg 14197672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 38761098 - 38761160
Alignment:
Q  294 gggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattc 356  Q
    |||| |||| ||| |||| |||||||||||| ||||||||||||| ||||| ||||| |||||    
T  38761098 gggactaaagtgactaacagagtctgcattcagggactaaattgactaacagagtctgcattc 38761160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 45012950 - 45013024
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||| |||| |||||| |||||||| ||||| | || |||||||| ||||  ||||| |||||||||||||    
T  45012950 ttcagggactaaagtgattagcggagtctacattcagagattaaattgactaacggagtctgcattcagggacta 45013024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 369
Target Start/End: Complemental strand, 15272426 - 15272389
Alignment:
Q  332 aaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||  |||||||||||||||||||||||||||||    
T  15272426 aaattgaccaacaaagtctacattcagggactattttg 15272389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 6441464 - 6441520
Alignment:
Q  308 taacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||||||||| ||||  | ||||||||||| ||||| ||||| |||||||||||||    
T  6441464 taacggagtctacatttagagactaaattgactaacagagtctgcattcagggacta 6441520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 8e-28; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 48755480 - 48755393
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  48755480 agtctacattcatggactaaattgactaacggagtctgcattcagggactaaattgactaacagagtctacattcagggactattttg 48755393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 15031341 - 15031255
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    ||||||||||||| || |||||||| ||||||||| ||||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  15031341 agtctacattcagtgactaaattgactaacggagtttgcattcagggactaaattgactaacagagtctacattcagggactatttt 15031255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 1426637 - 1426550
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||| | |||||||||||| |||||||||    
T  1426637 agtctacatttagggactaaattgactaacggagtctgcattcagggactaaattgactaacataatctacattcaggaactattttg 1426550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 353
Target Start/End: Original strand, 11989171 - 11989242
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctaca 353  Q
    |||||||||| | ||| |||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||    
T  11989171 agtctacatttaaggactaaattgattaacggagtctgcattcagggactagattgactaacagagtctaca 11989242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 14434766 - 14434853
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||||||||| || |||||| | || | |||| ||||||| ||||||||||||| ||||| |||||||||||| |||||||||||    
T  14434766 agtctacattcagagactaaattaactatctgagtttgcattcagggactaaattgactaacagagtctacattcatggactattttg 14434853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 281 - 368
Target Start/End: Complemental strand, 15005112 - 15005025
Alignment:
Q  281 aagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||| |||||||| ||| |||||| | |||| |||||||||||| |||| |||||||| ||||| |||||||||||| ||||||||||    
T  15005112 aagtatacattcaaggactaaattaactaactgagtctgcattcagggattaaattgactaacagagtctacattcaaggactatttt 15005025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 21514897 - 21514811
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||| ||||||| ||| |||||||| ||||| |||| |||||| ||||||||||| | ||||| |||||||||||| ||||||||||    
T  21514897 agtccacattcaaggactaaattgactaacgaagtccgcattcagggactaaattaactaacagagtctacattcaaggactatttt 21514811  T

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Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 33343159 - 33343074
Alignment:
Q  281 aagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattt 367  Q
    ||||||||||||||||| |||||||| ||||  ||| ||||||| |||||| |||||| ||||| ||||||||||||||||| ||||    
T  33343159 aagtctacattcagggactaaattgactaacatagtttgcattcagggact-aattgactaacatagtctacattcagggaccattt 33343074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 18445531 - 18445618
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||| |||| ||||||||||||||||||| ||||||||||| |  ||||| |||| ||||| ||| |||||||||  |||||||||    
T  18445531 agtctaaattctgggattaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacattcagaaactattttg 18445618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 369
Target Start/End: Original strand, 26498650 - 26498729
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||| |||| ||| ||||||||| ||||||| | ||||||||||| ||||  |||||||||||| |||||||||||    
T  26498650 ttcagggactaaagtgactaacggagtatgcattcagtgactaaattgactaaccgagtctacattcatggactattttg 26498729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 15031373 - 15031291
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||||||||||| || |||||||| ||||||||||| ||||| | ||||||||||| ||||  ||| | |||||||||||||    
T  15031373 agtctacattcagtgactaaattgactaacggagtctacattcagtgactaaattgactaacggagtttgcattcagggacta 15031291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 368
Target Start/End: Original strand, 43562727 - 43562812
Alignment:
Q  283 gtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||||||||||||||||||||||| ||| | |||||||||||   || ||||||||  |||| | |||||||||| ||||||||||    
T  43562727 gtctacattcagggattaaattgactaatgaagtctgcattcaacgattaaattgacaaacagaatctacattcaaggactatttt 43562812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 15031397 - 15031323
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||| |||| ||| ||||||||||| ||||| | ||||||||||| ||||  ||||||||||||| |||||    
T  15031397 ttcagggactaaagtgactaacggagtctacattcagtgactaaattgactaacggagtctacattcagtgacta 15031323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 369
Target Start/End: Original strand, 20759103 - 20759140
Alignment:
Q  332 aaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  20759103 aaattgactaacaaagtctacattcaaggactattttg 20759140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 1426643 - 1426587
Alignment:
Q  308 taacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||||||||| ||||  ||||||||||||| ||||  ||||| |||||||||||||    
T  1426643 taacggagtctacatttagggactaaattgactaacggagtctgcattcagggacta 1426587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 33343168 - 33343108
Alignment:
Q  304 tgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||||||  ||||| ||||| ||||||||||||| ||||| ||| | |||||||||||||    
T  33343168 tgattaacaaagtctacattcagggactaaattgactaacatagtttgcattcagggacta 33343108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 38498257 - 38498201
Alignment:
Q  313 gagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||| ||||| ||||||||||||| ||||||||| || ||| | |||||||||||    
T  38498257 gagtctacattcagggactaaattgactaacaaagtttatatttatggactattttg 38498201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 369
Target Start/End: Complemental strand, 42453149 - 42453109
Alignment:
Q  329 actaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||| ||||| |||||||||| |||||||||||||    
T  42453149 actaaattgactaacagagtctacatttagggactattttg 42453109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 8e-28; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 50335594 - 50335507
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||||| ||||||||  |||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  50335594 agtctacattcagggactaaattgacgaacggagtctgcattcagggactaaattgactaacaaagtctacattcatggactattttg 50335507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 37608125 - 37608038
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||| ||| |||||||| |||| ||||||||||||  |||||||||||| ||||| |||||||||||| |||||||||||    
T  37608125 agtctacattcaaggactaaattgactaacagagtctgcattcaaggactaaattgactaacagagtctacattcaaggactattttg 37608038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 13735598 - 13735511
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||| |  || |||||||| ||||||||||||||||| | ||||||||||| ||||| ||||||||||  ||||||||||||    
T  13735598 agtctacatttattgactaaattgactaacggagtctgcattcagagactaaattgactaacagagtctacattgtgggactattttg 13735511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 32374092 - 32374148
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattga 338  Q
    |||||||||||||||| |||||||| |||| |||| ||||||| |||||||||||||    
T  32374092 agtctacattcagggactaaattgactaacagagtttgcattcagggactaaattga 32374148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 8097841 - 8097928
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||| | |||||||| ||| ||||| || ||||  |||||||||||| ||||| | |||| ||||| |||||||||||    
T  8097841 agtctacattcaggaactaaattgactaatggagtatgtattcaaggactaaattgactaacagaatctatattcatggactattttg 8097928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 50335615 - 50335544
Alignment:
Q  293 agggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||| |||| |||||| |||||||| ||||| |||||||||||||  |||  ||||| |||||||||||||    
T  50335615 agggactaaagtgattagcggagtctacattcagggactaaattgacgaacggagtctgcattcagggacta 50335544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 37608149 - 37608075
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||||||  ||| ||| ||||||||||| |||||  |||||||||||| ||||| ||||| |||||| ||||||    
T  37608149 ttcagggaccaaagtgactaacggagtctacattcaaggactaaattgactaacagagtctgcattcaaggacta 37608075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 30470944 - 30471030
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    ||||||||||||  || |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  30470944 agtctacattcaatgactaaattgattaacggagtctgcattcagggactaaattgattaacatagtctacattcagggactatttt 30471030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 281 - 367
Target Start/End: Original strand, 2634149 - 2634235
Alignment:
Q  281 aagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattt 367  Q
    ||||||||||||||||| ||||||||  ||| |||||||||||| ||||||||||||| ||||| ||||||||||||| ||||||||    
T  2634149 aagtctacattcagggactaaattgacgaacagagtctgcattcagggactaaattgactaacagagtctacattcagagactattt 2634235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 18830700 - 18830787
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||||| |||||||| ||||| ||||||||||| |||||||||| || ||||| | |||||||||| |||||||||||    
T  18830700 agtctacattcagggactaaattgactaacgaagtctgcattcagggactaaatggactaacagaatctacattcaaggactattttg 18830787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 47943574 - 47943661
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||||||||||||||||||||| ||||||   ||||||||  | |||||||||| |||| |||||||||||||||||||||||||    
T  47943574 agtctacattcagggattaaattgactaacggttcctgcattcaagaactaaattgactaaccaagtctacattcagggactattttg 47943661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 55382682 - 55382769
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||||| |||||| |||||||| ||||||| ||||||||  ||||| ||||||| ||||||||||||||||||| ||||||||||    
T  55382682 agtctacatccagggactaaattgactaacggaatctgcatttagggacaaaattgactaacaaagtctacattcagagactattttg 55382769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 281 - 368
Target Start/End: Original strand, 1387467 - 1387555
Alignment:
Q  281 aagtctacattcagggattaaattgattaacggagtctgcattc-ggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||||||||||||| || |||||||| |||| |||||||||||| ||||||||||||||  |||||| |||||||||||||| ||||||    
T  1387467 aagtctacattcagcgactaaattgactaacagagtctgcattcaggggactaaattgatgaacaaaatctacattcagggaatatttt 1387555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 280 - 368
Target Start/End: Complemental strand, 5448351 - 5448263
Alignment:
Q  280 gaagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||||||| ||||||||| ||||||||  |||||||||||||| | ||||||||||||| ||||| ||| ||||||||||| |||||||    
T  5448351 gaagtctatattcagggactaaattgaccaacggagtctgcatccagggactaaattgactaacagagtttacattcaggggctatttt 5448263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 10380721 - 10380808
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||| ||||| |||||||| ||||| ||||||||||| |||| |||||||| ||||| |||||||||| || ||||||||||    
T  10380721 agtctacatttagggactaaattgactaacgaagtctgcattcagggattaaattgactaacagagtctacatttagagactattttg 10380808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 3370118 - 3370031
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||| || || |||||||| ||||| ||||||||||| ||||||||||||| ||||| |||||||||| |  ||||||||||    
T  3370118 agtctacattaagagactaaattgactaacgaagtctgcattcagggactaaattgactaacagagtctacatttaatgactattttg 3370031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 9826785 - 9826698
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||| |||||||||||||||||||||||| ||||||||||| |  ||||| |||| ||||| ||| |||||||||  |||||||||    
T  9826785 agtctaaattcagggattaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacattcagaaactattttg 9826698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 361
Target Start/End: Original strand, 18836405 - 18836483
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcaggga 361  Q
    |||||||||||||||| ||||| || ||||||||||||||||| |||||||||| || ||||| ||||||| ||||||||    
T  18836405 agtctacattcagggactaaat-gactaacggagtctgcattcagggactaaatggactaacagagtctacgttcaggga 18836483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 10757696 - 10757750
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaatt 336  Q
    |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  10757696 agtctacattcagggactaaattgactaacggagtctgcattcagggactaaatt 10757750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 10970867 - 10970921
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaatt 336  Q
    |||||||||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  10970867 agtctacattcagggactaaattgactaacggagtctgcattcagggactaaatt 10970921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 364
Target Start/End: Original strand, 1387402 - 1387486
Alignment:
Q  280 gaagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||||||||||| || | |||||||| |||||| || ||||||| || |||||| ||| ||||||||||||||||||| |||||    
T  1387402 gaagtctacattccggaactaaattgactaacggggtttgcattcaggaactaaagtgactaacaaagtctacattcagcgacta 1387486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 368
Target Start/End: Complemental strand, 2063297 - 2063213
Alignment:
Q  284 tctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||||||| ||||| |||||||| ||||||||| ||||||| | ||||||||||| ||||| ||| ||||||||  |||||||||    
T  2063297 tctacatttagggactaaattgactaacggagtttgcattcagagactaaattgactaacatagtttacattcaatgactatttt 2063213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 11821876 - 11821789
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||||||||  || |||||||| ||||| | ||||||||| ||||||||||| | ||||| ||||||||||||  ||||||||||    
T  11821876 agtctacattcatagactaaattgactaacgaaatctgcattcagggactaaattaactaacagagtctacattcaaagactattttg 11821789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 369
Target Start/End: Original strand, 22017984 - 22018063
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||| ||| |||| ||||||||||||| | ||||| | |||||||| || ||||| ||||||||||||||||||||||||    
T  22017984 ttcaaggactaaagtgattaacggagtatacattcagagactaaatagactaacatagtctacattcagggactattttg 22018063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 18830676 - 18830750
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||| |||| ||| ||| ||||||| ||||| ||||||||||||| |||| |||||| |||||||||||||    
T  18830676 ttcagggactaaagtgactaatggagtctacattcagggactaaattgactaacgaagtctgcattcagggacta 18830750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 283 - 369
Target Start/End: Original strand, 37695059 - 37695145
Alignment:
Q  283 gtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||| |||| |||||||||||||| |||| ||||||||||||   || |||||||| ||||| ||||||||||||| || |||||||    
T  37695059 gtctgcatttagggattaaattgactaacagagtctgcattcaacgattaaattgactaacagagtctacattcagagattattttg 37695145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 47144842 - 47144760
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||| |||||||| | ||||||||||||||||||||  ||||  |||||||||||| ||||  |||||||||||||| ||||    
T  47144842 agtctgcattcaggaactaaattgattaacggagtctttattcaaggactaaattgactaactgagtctacattcaggaacta 47144760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 10757673 - 10757746
Alignment:
Q  291 tcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||||| | |||||||| |||||| ||||| ||||||||||||| ||||  ||||| |||||||||||||    
T  10757673 tcagggattatagtgattaacagagtctacattcagggactaaattgactaacggagtctgcattcagggacta 10757746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 10970844 - 10970917
Alignment:
Q  291 tcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||||| | |||||||| |||||| ||||| ||||||||||||| ||||  ||||| |||||||||||||    
T  10970844 tcagggattatagtgattaacagagtctacattcagggactaaattgactaacggagtctgcattcagggacta 10970917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 369
Target Start/End: Complemental strand, 30378888 - 30378808
Alignment:
Q  289 attcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||||| | |||||| |||| |||||||||||| | |||| |||||| ||||| ||||| ||||||| ||||||||||    
T  30378888 attcagggactgaattgactaacagagtctgcattcagagactgaattgactaacagagtctgcattcagagactattttg 30378808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 361
Target Start/End: Complemental strand, 18500775 - 18500704
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcaggga 361  Q
    ||||| || |||| |||||||| ||||||  |||| ||||||||||||| ||||| ||||||||||||||||    
T  18500775 ttcagagactaaagtgattaacagagtctaaattcagggactaaattgactaacagagtctacattcaggga 18500704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 368
Target Start/End: Original strand, 2232496 - 2232582
Alignment:
Q  281 aagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    ||||||||||||||||| |||||||  |||| |||||| ||  | |||| |||||||| ||||| |||||||||| | ||||||||||    
T  2232496 aagtctacattcagggactaaattggctaacagagtct-caaccagggattaaattgactaacatagtctacattgaaggactatttt 2232582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 361
Target Start/End: Original strand, 10380697 - 10380768
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcaggga 361  Q
    |||||||| |||| ||| |||| |||||| ||||  ||||||||||||| |||| |||||| ||||||||||    
T  10380697 ttcagggactaaagtgactaactgagtctacatttagggactaaattgactaacgaagtctgcattcaggga 10380768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 2634126 - 2634200
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||| || |||| ||||||||  ||||| ||||| |||||||||||||  |||| ||||| |||||||||||||    
T  2634126 ttcagcgactaaagtgattaacaaagtctacattcagggactaaattgacgaacagagtctgcattcagggacta 2634200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 5324813 - 5324895
Alignment:
Q  286 tacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||||||| ||| |||||||| |||| ||||||||||||  | |||||||||| ||||| ||||| || ||||  ||||||||    
T  5324813 tacattcaaggactaaattgactaacagagtctgcattcatgaactaaattgactaacagagtctgcaatcagaaactatttt 5324895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 2634132 - 2634177
Alignment:
Q  328 gactaaattgagtaacaaagtctacattcagggactattttgacga 373  Q
    ||||||| ||| |||||||||||||||||||||||||  |||||||    
T  2634132 gactaaagtgattaacaaagtctacattcagggactaaattgacga 2634177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 368
Target Start/End: Original strand, 8951131 - 8951200
Alignment:
Q  299 taaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||| ||| ||||| ||||| ||||  || |||||||||| ||||||| |||||||||||| ||||||||    
T  8951131 taaaatgactaacgaagtctacattaaggaactaaattgactaacaaaatctacattcaggaactatttt 8951200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 369
Target Start/End: Complemental strand, 314229 - 314144
Alignment:
Q  284 tctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||    
T  314229 tctacattcagggactaaattgactaacggagtctgcattcagggactaaattgactaacagagtctacatttagggactattttg 314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 314255 - 314181
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||| |||| ||| |||| || ||| ||||| ||||||||||||| ||||  ||||| |||||||||||||    
T  314255 ttcagggactaaagtgactaacagactctacattcagggactaaattgactaacggagtctgcattcagggacta 314181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 280 - 369
Target Start/End: Complemental strand, 25089307 - 25089218
Alignment:
Q  280 gaagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||||||| |||||||| ||| |||||||||||||   ||||||||||| ||||| ||||||||||||||||||||||||    
T  25089307 gaagtctacattcagggactaaattgactaatggagtctgcattcaatgactaaattgactaacagagtctacattcagggactattttg 25089218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 13536714 - 13536626
Alignment:
Q  282 agtctacattcagggat-taaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||||   |||||||| ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  13536714 agtctacattcagggggctaaattgactaacggagtctgcattcagggactaaattgactaacagagtctacattcagggactattttg 13536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 19295407 - 19295494
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||||| |||||||| ||| | ||||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||    
T  19295407 agtctacattcagggactaaattgactaatgaagtctgcattcagggactaaattgactaacagagtctgcattcagggactattttg 19295494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 21222591 - 21222678
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||||| |||||||| ||||| ||||||||||| | |||||| |||| ||||| ||| ||||||||| ||||||||||    
T  21222591 agtctacattcagggactaaattgactaacgaagtctgcattcagagactaagttgactaacatagtatacattcagagactattttg 21222678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 10588014 - 10588084
Alignment:
Q  299 taaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||| |||||||||||||||||  |||||||||||| ||| |||||||||||||| |||||||||||    
T  10588014 taaattgactaacggagtctgcattcaaggactaaattgactaataaagtctacattcatggactattttg 10588084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 10862166 - 10862084
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||| ||||||||| |||||||| ||||||||||||| ||| |||| | |||||| ||||| |||||||||||||||||||    
T  10862166 agtctatattcagggactaaattgactaacggagtctgccttcagggattgaattgactaacagagtctacattcagggacta 10862084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 280 - 369
Target Start/End: Original strand, 10672742 - 10672830
Alignment:
Q  280 gaagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||||||| |||||||| ||||| | | ||||||| | ||||||||||| ||||||| |||||||||||| |||||||||    
T  10672742 gaagtctacattcagggactaaattgactaacgaaatatgcattcagagactaaattgattaacaaa-tctacattcaggaactattttg 10672830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 364
Target Start/End: Complemental strand, 26705179 - 26705099
Alignment:
Q  284 tctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||||||||| |||||||| ||||||| |||  |||| ||||||||||||| |||| || ||| |||||||||||||    
T  26705179 tctacattcagggactaaattgactaacggattctatattcagggactaaattgattaacgaaatctgcattcagggacta 26705099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 19295383 - 19295457
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||| |||| |||  |||||||||| ||||| ||||||||||||| |||  |||||| |||||||||||||    
T  19295383 ttcagggactaaagtgaccaacggagtctacattcagggactaaattgactaatgaagtctgcattcagggacta 19295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 26705147 - 26705093
Alignment:
Q  284 tctacattcagggattaaattgattaacggagtctgcattcggggactaaattga 338  Q
    |||| ||||||||| |||||||||||||| | ||||||||| |||||||||||||    
T  26705147 tctatattcagggactaaattgattaacgaaatctgcattcagggactaaattga 26705093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 19295437 - 19295489
Alignment:
Q  280 gaagtctacattcagggattaaattgattaacggagtctgcattcggggacta 332  Q
    ||||||| |||||||||| |||||||| |||| |||||||||||| |||||||    
T  19295437 gaagtctgcattcagggactaaattgactaacagagtctgcattcagggacta 19295489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 21222567 - 21222641
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||| |||||||  ||| |||| |||||| ||||| ||||||||||||| |||| |||||| ||||||| |||||    
T  21222567 ttcaaggattaatgtgactaactgagtctacattcagggactaaattgactaacgaagtctgcattcagagacta 21222641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 56; Significance: 5e-23; HSPs: 6)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 281 - 364
Target Start/End: Original strand, 960 - 1043
Alignment:
Q  281 aagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||| || ||| |||||||||||||    
T  960 aagtctacattcagggattaaattgactaacgaagtctgcattcagggactaaattgactaacgaaatctgcattcagggacta 1043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 281 - 364
Target Start/End: Original strand, 7424 - 7507
Alignment:
Q  281 aagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||| || ||| |||||||||||||    
T  7424 aagtctacattcagggattaaattgactaacgaagtctgcattcagggactaaattgactaacgaaatctgcattcagggacta 7507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 280 - 369
Target Start/End: Original strand, 991 - 1080
Alignment:
Q  280 gaagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||| |||||||||| |||||||| ||||| | ||||||||| ||||||||||||| ||| ||||||||| ||||||||||||||||    
T  991 gaagtctgcattcagggactaaattgactaacgaaatctgcattcagggactaaattgaataataaagtctacgttcagggactattttg 1080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 280 - 369
Target Start/End: Original strand, 7455 - 7544
Alignment:
Q  280 gaagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||| |||||||||| |||||||| ||||| | ||||||||| ||||||||||||| ||| ||||||||| ||||||||||||||||    
T  7455 gaagtctgcattcagggactaaattgactaacgaaatctgcattcagggactaaattgaataataaagtctacgttcagggactattttg 7544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 937 - 1011
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||| |||| ||| ||||  ||||| ||||| |||| |||||||| |||| |||||| |||||||||||||    
T  937 ttcagggactaaagtgactaacaaagtctacattcagggattaaattgactaacgaagtctgcattcagggacta 1011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 7401 - 7475
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    |||||||| |||| ||| ||||  ||||| ||||| |||| |||||||| |||| |||||| |||||||||||||    
T  7401 ttcagggactaaagtgactaacaaagtctacattcagggattaaattgactaacgaagtctgcattcagggacta 7475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 39598633 - 39598720
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||||||||||||| |||||||| ||||||||| | ||||| | |||||||||||  |||||||||||||||||||||||||||||    
T  39598633 agtctacattcagggactaaattgactaacggagtatacattcagcgactaaattgaccaacaaagtctacattcagggactattttg 39598720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 8219292 - 8219217
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattca 357  Q
    |||| |||||||||||||||||||| ||||||||||||||||| |  |||||||||| ||||| ||||||||||||    
T  8219292 agtccacattcagggattaaattgactaacggagtctgcattcagaaactaaattgactaacagagtctacattca 8219217  T

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Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 281 - 368
Target Start/End: Original strand, 31499475 - 31499562
Alignment:
Q  281 aagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||| |  |||||| ||| ||||| | |||||||||||||||||||||    
T  31499475 aagtctacattcaaggactaaattgactaacggagtctgcattcagaaactaaaatgactaacagattctacattcagggactatttt 31499562  T

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Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 22093013 - 22092927
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||||| ||||||||| ||||||||  || ||||||||||||| || |||||| ||| ||||| |||||||||||||||||||||||    
T  22093013 agtctatattcagggactaaattgacgaatggagtctgcattcaggaactaaactgactaacagagtctacattcagggactatttt 22092927  T

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Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 368
Target Start/End: Original strand, 32092870 - 32092939
Alignment:
Q  299 taaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||| ||| ||||| ||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  32092870 taaagtgactaacgaagtctacattcagggactaaattgactaacagagtctacattcagggactatttt 32092939  T

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Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 24007006 - 24007081
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattca 357  Q
    |||||||||||||| | || |||||| |||||| |||||||||  |||||||||||| ||||| ||||||||||||    
T  24007006 agtctacattcaggtactacattgatcaacggaatctgcattcatggactaaattgactaacagagtctacattca 24007081  T

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Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 368
Target Start/End: Complemental strand, 31820063 - 31819981
Alignment:
Q  286 tacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    ||||||||| || |||||||| |||   |||||||||||  ||||||||| || ||||| ||||||||||||| |||||||||    
T  31820063 tacattcagagactaaattgactaagaaagtctgcattcaaggactaaatggactaacagagtctacattcagtgactatttt 31819981  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 32092883 - 32092935
Alignment:
Q  280 gaagtctacattcagggattaaattgattaacggagtctgcattcggggacta 332  Q
    |||||||||||||||||| |||||||| |||| |||||| ||||| |||||||    
T  32092883 gaagtctacattcagggactaaattgactaacagagtctacattcagggacta 32092935  T

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Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 31820088 - 31820017
Alignment:
Q  293 agggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||| |||| ||||||||||||| | ||||| | ||||||||||| ||| ||||||| |||||| ||||||    
T  31820088 agggactaaagtgattaacggagtatacattcagagactaaattgactaagaaagtctgcattcaaggacta 31820017  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 39598612 - 39598683
Alignment:
Q  293 agggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||| |||| ||| ||||||||||| ||||| ||||||||||||| ||||  ||| ||||||||| |||||    
T  39598612 agggactaaagtgactaacggagtctacattcagggactaaattgactaacggagtatacattcagcgacta 39598683  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 369
Target Start/End: Complemental strand, 24006983 - 24006946
Alignment:
Q  332 aaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  24006983 aaattgagtaacagagtctacattcagggactgttttg 24006946  T

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Target: scaffold0102 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 369
Target Start/End: Complemental strand, 24046 - 23958
Alignment:
Q  281 aagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    ||||||||||||| ||| ||||||||  ||| |||||||||||| ||||||||||||| ||||  ||||||||||| ||||| ||||||    
T  24046 aagtctacattcaaggactaaattgaccaacagagtctgcattcagggactaaattgactaacgtagtctacattcggggaccattttg 23958  T

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Target: scaffold0066 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 368
Target Start/End: Complemental strand, 15516 - 15432
Alignment:
Q  284 tctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    ||||||||||| || |||||||  ||||||||||| ||||| | || |||||||| ||||| ||||||||||||| |||||||||    
T  15516 tctacattcagagactaaattggctaacggagtctacattcagagattaaattgactaacagagtctacattcagagactatttt 15432  T

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Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 127957 - 127870
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactattttg 369  Q
    |||||| |||| ||||||||||||||||||| ||||||||||| |  ||||| |||| ||||| ||| |||||||||  |||||||||    
T  127957 agtctaaattctgggattaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacattcagaaactattttg 127870  T

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Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 57602 - 57516
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggactatttt 368  Q
    |||||| ||||||||| |||||||||||||| ||||||||||| |  ||||| |||| ||||| ||| |||||||||  ||||||||    
T  57602 agtctaaattcagggactaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacattcagaaactatttt 57516  T

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Target: scaffold0049 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 338
Target Start/End: Original strand, 59807 - 59855
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattga 338  Q
    |||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  59807 ttcagggactaaattgactaacggagtctgcattcagggactaaattga 59855  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 190308 - 190372
Alignment:
Q  286 tacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtct 350  Q
    |||||| ||||| |||||||| |||| ||||||| |||| || |||||||||| |||||||||||    
T  190308 tacatttagggactaaattgactaacagagtctgtattcaggaactaaattgactaacaaagtct 190372  T

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Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 190280 - 190354
Alignment:
Q  290 ttcagggattaaattgattaacggagtctgcattcggggactaaattgagtaacaaagtctacattcagggacta 364  Q
    ||||||||||||||||||||||  ||| | ||||  ||||||||||||| ||||| |||||  ||||||| ||||    
T  190280 ttcagggattaaattgattaacatagtttacatttagggactaaattgactaacagagtctgtattcaggaacta 190354  T

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Target: scaffold1300 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 344
Target Start/End: Complemental strand, 1503 - 1441
Alignment:
Q  282 agtctacattcagggattaaattgattaacggagtctgcattcggggactaaattgagtaaca 344  Q
    |||||||||||||||| |||||| | ||||| ||||||||||| | |||||| |||| |||||    
T  1503 agtctacattcagggactaaattaactaacgaagtctgcattcagagactaagttgattaaca 1441  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Original strand, 27613 - 27670
Alignment:
Q  280 gaagtctacattcagggattaaattgattaacggagtctgcattcggggactaaattg 337  Q
    |||||||||||||||| | |||||||| |||||| || || |||| ||||||||||||    
T  27613 gaagtctacattcaggaagtaaattgactaacggggtatgtattcagggactaaattg 27670  T

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