View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13789_high_15 (Length: 450)

Name: NF13789_high_15
Description: NF13789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13789_high_15
NF13789_high_15
[»] chr7 (65 HSPs)
chr7 (77-440)||(47268886-47269251)
chr7 (108-436)||(18237555-18237886)
chr7 (108-440)||(39477125-39477460)
chr7 (108-440)||(48220629-48220962)
chr7 (108-440)||(34140852-34141186)
chr7 (152-432)||(41217609-41217892)
chr7 (108-434)||(17183205-17183537)
chr7 (108-440)||(30360504-30360836)
chr7 (108-440)||(40588536-40588870)
chr7 (157-440)||(20378639-20378923)
chr7 (129-440)||(20564746-20565057)
chr7 (108-440)||(17839310-17839644)
chr7 (154-440)||(48270635-48270925)
chr7 (126-336)||(2205940-2206152)
chr7 (151-440)||(2356276-2356566)
chr7 (129-440)||(10523055-10523367)
chr7 (151-440)||(41048770-41049063)
chr7 (108-440)||(45363138-45363463)
chr7 (151-440)||(46862121-46862414)
chr7 (151-440)||(36393751-36394044)
chr7 (151-440)||(48315107-48315400)
chr7 (151-440)||(15337832-15338125)
chr7 (223-440)||(21187299-21187519)
chr7 (151-439)||(43351027-43351318)
chr7 (223-440)||(28114393-28114613)
chr7 (185-433)||(21614722-21614973)
chr7 (157-433)||(1642525-1642800)
chr7 (151-440)||(42735250-42735542)
chr7 (223-433)||(21650518-21650731)
chr7 (223-406)||(30354815-30355000)
chr7 (129-344)||(9367029-9367243)
chr7 (286-440)||(26603268-26603425)
chr7 (267-440)||(28979066-28979242)
chr7 (151-284)||(26601706-26601839)
chr7 (147-301)||(13920435-13920587)
chr7 (114-235)||(28978943-28979064)
chr7 (312-440)||(13916820-13916949)
chr7 (157-282)||(17320137-17320260)
chr7 (332-440)||(42682943-42683052)
chr7 (185-262)||(34139334-34139411)
chr7 (109-209)||(30360965-30361064)
chr7 (108-210)||(18238013-18238114)
chr7 (108-210)||(48220402-48220503)
chr7 (108-210)||(17183664-17183765)
chr7 (108-210)||(34141313-34141414)
chr7 (149-210)||(28978873-28978934)
chr7 (113-210)||(41218066-41218162)
chr7 (147-210)||(26601436-26601499)
chr7 (153-206)||(48271140-48271193)
chr7 (150-202)||(1642257-1642310)
chr7 (150-206)||(15337567-15337623)
chr7 (174-256)||(3380626-3380707)
chr7 (146-199)||(4230291-4230346)
chr7 (153-206)||(10224559-10224612)
chr7 (153-206)||(20877714-20877767)
chr7 (153-206)||(21186961-21187014)
chr7 (153-206)||(21651015-21651068)
chr7 (150-206)||(20877471-20877527)
chr7 (157-206)||(21614393-21614440)
chr7 (150-206)||(28113813-28113869)
chr7 (147-206)||(21614447-21614506)
chr7 (157-205)||(28113998-28114044)
chr7 (147-206)||(28114055-28114114)
chr7 (150-206)||(30361245-30361301)
chr7 (147-206)||(42683139-42683198)
[»] chr3 (103 HSPs)
chr3 (108-440)||(25576477-25576811)
chr3 (126-440)||(53826599-53826916)
chr3 (108-436)||(47065690-47066021)
chr3 (108-440)||(42383050-42383385)
chr3 (108-440)||(42949905-42950240)
chr3 (112-440)||(48087441-48087772)
chr3 (108-433)||(34693175-34693503)
chr3 (108-440)||(19453114-19453449)
chr3 (151-432)||(39416876-39417160)
chr3 (108-440)||(44835372-44835707)
chr3 (108-440)||(13895755-13896090)
chr3 (108-440)||(44927462-44927797)
chr3 (108-440)||(24702157-24702491)
chr3 (184-440)||(42382270-42382529)
chr3 (147-440)||(3494955-3495249)
chr3 (147-440)||(2268420-2268714)
chr3 (147-440)||(4004013-4004307)
chr3 (183-440)||(49610488-49610748)
chr3 (147-440)||(2646802-2647096)
chr3 (147-440)||(36135007-36135300)
chr3 (112-440)||(43477056-43477386)
chr3 (129-440)||(49139963-49140274)
chr3 (129-440)||(54390441-54390752)
chr3 (129-440)||(34049726-34050037)
chr3 (129-440)||(46403002-46403313)
chr3 (223-440)||(46414334-46414554)
chr3 (151-440)||(51013205-51013498)
chr3 (183-440)||(51695566-51695826)
chr3 (176-440)||(49218689-49218956)
chr3 (223-439)||(51015277-51015496)
chr3 (223-437)||(45100465-45100682)
chr3 (151-440)||(30192537-30192830)
chr3 (151-440)||(43569909-43570202)
chr3 (151-427)||(41577918-41578198)
chr3 (157-440)||(6754203-6754488)
chr3 (151-432)||(34472003-34472288)
chr3 (223-440)||(34647267-34647487)
chr3 (147-375)||(50997453-50997681)
chr3 (223-437)||(55206884-55207101)
chr3 (151-440)||(41803901-41804194)
chr3 (223-440)||(47759891-47760111)
chr3 (157-440)||(6464280-6464565)
chr3 (223-440)||(2428486-2428706)
chr3 (223-440)||(14631444-14631664)
chr3 (223-440)||(37281451-37281671)
chr3 (223-434)||(10053275-10053485)
chr3 (223-440)||(27186947-27187167)
chr3 (223-440)||(49273398-49273618)
chr3 (223-438)||(52569409-52569626)
chr3 (151-440)||(7954202-7954496)
chr3 (152-406)||(7246128-7246385)
chr3 (151-433)||(8633292-8633572)
chr3 (224-440)||(36721390-36721609)
chr3 (151-400)||(42323316-42323568)
chr3 (223-440)||(50458691-50458911)
chr3 (156-405)||(774274-774522)
chr3 (151-440)||(33449082-33449359)
chr3 (157-427)||(20375818-20376089)
chr3 (151-341)||(46346539-46346732)
chr3 (223-440)||(14265407-14265624)
chr3 (156-406)||(25887542-25887795)
chr3 (126-195)||(11378840-11378909)
chr3 (346-440)||(15637023-15637118)
chr3 (157-312)||(18440873-18441028)
chr3 (157-312)||(19485947-19486102)
chr3 (108-210)||(25576249-25576350)
chr3 (113-210)||(24701930-24702026)
chr3 (147-210)||(13895528-13895591)
chr3 (108-206)||(37281913-37282010)
chr3 (113-210)||(44835145-44835241)
chr3 (113-210)||(42383516-42383612)
chr3 (147-210)||(34692948-34693011)
chr3 (147-210)||(44927961-44928024)
chr3 (108-210)||(11378635-11378736)
chr3 (147-204)||(19452811-19452868)
chr3 (150-203)||(20375556-20375610)
chr3 (158-202)||(6464012-6464057)
chr3 (113-210)||(39416605-39416701)
chr3 (108-210)||(3494688-3494790)
chr3 (158-206)||(15637226-15637273)
chr3 (146-206)||(25887273-25887334)
chr3 (147-206)||(34646929-34646988)
chr3 (112-203)||(36721053-36721143)
chr3 (156-206)||(7246601-7246651)
chr3 (156-206)||(18441249-18441299)
chr3 (156-206)||(19486323-19486373)
chr3 (156-206)||(27187820-27187870)
chr3 (128-210)||(50997867-50997948)
chr3 (153-206)||(8633027-8633080)
chr3 (153-206)||(41578409-41578462)
chr3 (176-210)||(47066213-47066247)
chr3 (153-206)||(49273907-49273960)
chr3 (150-202)||(6754703-6754756)
chr3 (385-433)||(11378908-11378957)
chr3 (386-434)||(46346745-46346794)
chr3 (151-200)||(52569336-52569383)
chr3 (147-210)||(2268153-2268216)
chr3 (108-210)||(4003746-4003848)
chr3 (157-205)||(42322995-42323041)
chr3 (393-440)||(42328288-42328336)
chr3 (157-205)||(46346217-46346263)
chr3 (108-210)||(49139713-49139815)
chr3 (153-204)||(52569073-52569124)
[»] chr2 (58 HSPs)
chr2 (108-440)||(12968184-12968519)
chr2 (108-440)||(22493260-22493595)
chr2 (108-440)||(29906571-29906906)
chr2 (112-440)||(42120001-42120332)
chr2 (108-440)||(10360082-10360416)
chr2 (112-440)||(42240985-42241316)
chr2 (108-440)||(32734636-32734971)
chr2 (108-440)||(16581811-16582148)
chr2 (183-440)||(3941726-3941986)
chr2 (151-440)||(35491624-35491917)
chr2 (151-440)||(29111147-29111437)
chr2 (151-440)||(10364562-10364854)
chr2 (129-440)||(3936970-3937281)
chr2 (129-440)||(43982845-43983156)
chr2 (108-440)||(39393880-39394215)
chr2 (157-440)||(5420458-5420742)
chr2 (129-440)||(17424778-17425089)
chr2 (151-436)||(2919289-2919578)
chr2 (147-440)||(29067718-29068012)
chr2 (152-440)||(19471559-19471851)
chr2 (147-440)||(22001823-22002117)
chr2 (151-437)||(34521608-34521898)
chr2 (223-440)||(37312492-37312712)
chr2 (223-440)||(41499091-41499311)
chr2 (151-436)||(6976831-6977118)
chr2 (223-433)||(27130506-27130719)
chr2 (151-440)||(17796034-17796321)
chr2 (158-432)||(33404012-33404286)
chr2 (223-440)||(20148107-20148327)
chr2 (230-440)||(6901955-6902168)
chr2 (290-427)||(18392035-18392179)
chr2 (108-295)||(18393486-18393674)
chr2 (286-440)||(39799902-39800059)
chr2 (223-376)||(40677372-40677527)
chr2 (302-440)||(34638955-34639093)
chr2 (157-440)||(16253465-16253728)
chr2 (113-202)||(32735102-32735191)
chr2 (108-211)||(10359853-10359955)
chr2 (151-284)||(18036088-18036220)
chr2 (151-282)||(43491600-43491732)
chr2 (108-210)||(42120463-42120564)
chr2 (111-210)||(22493725-22493823)
chr2 (174-284)||(31991885-31991994)
chr2 (147-210)||(16582312-16582375)
chr2 (108-243)||(39799753-39799886)
chr2 (113-207)||(18393805-18393898)
chr2 (366-440)||(31770352-31770427)
chr2 (176-301)||(27650378-27650502)
chr2 (372-440)||(40678763-40678832)
chr2 (147-210)||(8557381-8557444)
chr2 (150-206)||(33404502-33404558)
chr2 (153-206)||(10364296-10364349)
chr2 (151-206)||(16253944-16254000)
chr2 (147-210)||(29111601-29111664)
chr2 (153-204)||(35492128-35492179)
chr2 (146-206)||(35492316-35492376)
chr2 (157-205)||(41498696-41498742)
chr2 (153-204)||(43491944-43491995)
[»] chr8 (44 HSPs)
chr8 (110-437)||(33799437-33799767)
chr8 (108-440)||(28706026-28706361)
chr8 (108-440)||(43638561-43638895)
chr8 (108-440)||(42168844-42169179)
chr8 (108-440)||(43693132-43693467)
chr8 (111-440)||(34614948-34615280)
chr8 (108-440)||(38033809-38034144)
chr8 (108-436)||(40415256-40415587)
chr8 (108-437)||(40414608-40414938)
chr8 (147-440)||(15032249-15032543)
chr8 (108-440)||(26452320-26452654)
chr8 (185-440)||(41363651-41363909)
chr8 (108-440)||(24861338-24861672)
chr8 (183-440)||(41275389-41275649)
chr8 (108-440)||(2416910-2417243)
chr8 (129-440)||(485166-485477)
chr8 (223-440)||(44943080-44943300)
chr8 (223-440)||(41856973-41857193)
chr8 (150-440)||(42603449-42603743)
chr8 (223-440)||(18440294-18440514)
chr8 (151-440)||(40702355-40702649)
chr8 (151-440)||(19242088-19242381)
chr8 (151-440)||(19315272-19315565)
chr8 (267-440)||(26484572-26484748)
chr8 (147-440)||(31171740-31172035)
chr8 (147-433)||(3589188-3589478)
chr8 (301-432)||(16575695-16575827)
chr8 (319-440)||(22548258-22548380)
chr8 (108-284)||(22549236-22549408)
chr8 (108-203)||(28705805-28705899)
chr8 (108-210)||(42168616-42168717)
chr8 (147-210)||(40415751-40415814)
chr8 (150-210)||(22549575-22549635)
chr8 (147-210)||(38033582-38033645)
chr8 (149-206)||(16576152-16576209)
chr8 (176-210)||(24861865-24861899)
chr8 (153-206)||(28167338-28167391)
chr8 (113-210)||(44050900-44050996)
chr8 (113-198)||(40415069-40415153)
chr8 (151-200)||(41856900-41856947)
chr8 (408-440)||(12504911-12504943)
chr8 (151-206)||(31171479-31171535)
chr8 (153-204)||(41856635-41856686)
chr8 (153-204)||(42603951-42604002)
[»] chr1 (101 HSPs)
chr1 (108-440)||(47487923-47488258)
chr1 (111-440)||(42571665-42571997)
chr1 (110-440)||(39224085-39224418)
chr1 (108-440)||(27035204-27035539)
chr1 (107-440)||(45689106-45689440)
chr1 (108-440)||(48568290-48568625)
chr1 (108-433)||(35576331-35576659)
chr1 (108-404)||(46180166-46180465)
chr1 (108-440)||(50068145-50068480)
chr1 (146-440)||(12791197-12791494)
chr1 (108-440)||(41874770-41875105)
chr1 (108-440)||(49598777-49599095)
chr1 (108-433)||(49262874-49263202)
chr1 (146-423)||(3658475-3658755)
chr1 (108-440)||(29762108-29762442)
chr1 (108-440)||(51269787-51270121)
chr1 (110-440)||(29435958-29436290)
chr1 (108-440)||(44337206-44337540)
chr1 (181-440)||(27486649-27486911)
chr1 (151-440)||(14173686-14173979)
chr1 (147-440)||(44597686-44597982)
chr1 (151-440)||(13972909-13973202)
chr1 (152-440)||(30309762-30310047)
chr1 (157-433)||(39856843-39857120)
chr1 (185-440)||(49427372-49427630)
chr1 (185-440)||(13635260-13635518)
chr1 (147-440)||(19160302-19160596)
chr1 (151-440)||(21484574-21484864)
chr1 (152-440)||(24270292-24270584)
chr1 (151-440)||(6435757-6436050)
chr1 (223-440)||(18170010-18170230)
chr1 (151-440)||(36909546-36909839)
chr1 (151-440)||(38046362-38046655)
chr1 (223-440)||(35586930-35587150)
chr1 (223-440)||(17686362-17686582)
chr1 (151-440)||(49396689-49396982)
chr1 (151-402)||(37778103-37778357)
chr1 (151-440)||(23342626-23342919)
chr1 (223-440)||(49926381-49926600)
chr1 (146-436)||(17697035-17697326)
chr1 (157-425)||(13283705-13283973)
chr1 (217-432)||(48215191-48215409)
chr1 (151-440)||(41780678-41780971)
chr1 (223-438)||(35184957-35185176)
chr1 (229-440)||(18842424-18842638)
chr1 (184-440)||(5765191-5765449)
chr1 (239-440)||(35526194-35526398)
chr1 (157-440)||(17372712-17372996)
chr1 (157-422)||(24363738-24364003)
chr1 (108-301)||(29707424-29707620)
chr1 (172-433)||(16532042-16532304)
chr1 (276-416)||(16081294-16081437)
chr1 (301-380)||(13148365-13148444)
chr1 (147-249)||(22527686-22527786)
chr1 (108-210)||(47487695-47487796)
chr1 (113-210)||(27034976-27035073)
chr1 (108-208)||(3658919-3659018)
chr1 (113-210)||(30309491-30309587)
chr1 (113-210)||(51270252-51270348)
chr1 (108-210)||(45689566-45689667)
chr1 (108-210)||(46179938-46180039)
chr1 (108-210)||(49262655-49262756)
chr1 (111-210)||(50067917-50068015)
chr1 (113-210)||(29707197-29707293)
chr1 (223-301)||(40533287-40533365)
chr1 (366-433)||(16098078-16098146)
chr1 (108-206)||(12790936-12791033)
chr1 (108-206)||(17697466-17697563)
chr1 (108-206)||(18170472-18170569)
chr1 (131-210)||(41874544-41874622)
chr1 (146-206)||(16081766-16081827)
chr1 (146-206)||(18170668-18170728)
chr1 (113-210)||(39223857-39223952)
chr1 (113-210)||(48568064-48568160)
chr1 (112-210)||(49598546-49598646)
chr1 (147-206)||(38044612-38044671)
chr1 (157-199)||(16098022-16098063)
chr1 (147-204)||(18842937-18842994)
chr1 (149-203)||(42571442-42571496)
chr1 (113-210)||(44336979-44337075)
chr1 (376-440)||(15471503-15471568)
chr1 (150-206)||(24363475-24363531)
chr1 (147-210)||(21484436-21484499)
chr1 (151-206)||(14772462-14772517)
chr1 (188-227)||(48226760-48226799)
chr1 (153-206)||(17686021-17686074)
chr1 (113-210)||(29436423-29436519)
chr1 (153-206)||(37778569-37778622)
chr1 (406-440)||(46181739-46181773)
chr1 (150-206)||(12790693-12790749)
chr1 (157-202)||(13973481-13973524)
chr1 (150-206)||(17685779-17685835)
chr1 (153-204)||(6436262-6436313)
chr1 (157-205)||(12790879-12790925)
chr1 (150-206)||(13284188-13284244)
chr1 (108-210)||(22527951-22528053)
chr1 (153-204)||(23343130-23343181)
chr1 (150-206)||(24269786-24269842)
chr1 (157-205)||(38044798-38044844)
chr1 (153-204)||(38044857-38044908)
chr1 (157-205)||(40532892-40532938)
[»] scaffold0589 (2 HSPs)
scaffold0589 (108-440)||(2254-2589)
scaffold0589 (181-210)||(4805-4834)
[»] chr5 (65 HSPs)
chr5 (108-440)||(19400347-19400682)
chr5 (108-440)||(1971349-1971684)
chr5 (108-440)||(3601325-3601660)
chr5 (129-440)||(7141-7452)
chr5 (129-440)||(8576053-8576364)
chr5 (183-440)||(541598-541858)
chr5 (108-440)||(8537938-8538271)
chr5 (147-440)||(27661306-27661600)
chr5 (108-440)||(11346693-11347026)
chr5 (147-440)||(28880975-28881269)
chr5 (129-440)||(19036586-19036897)
chr5 (212-440)||(40009512-40009743)
chr5 (151-440)||(18308244-18308537)
chr5 (157-440)||(11027761-11028045)
chr5 (151-440)||(1400232-1400525)
chr5 (185-440)||(30709582-30709840)
chr5 (151-440)||(4724004-4724297)
chr5 (108-440)||(38854142-38854474)
chr5 (230-440)||(33370638-33370851)
chr5 (223-440)||(35565256-35565475)
chr5 (151-301)||(7082347-7082497)
chr5 (223-440)||(36350317-36350528)
chr5 (223-440)||(6793389-6793609)
chr5 (108-262)||(3458955-3459109)
chr5 (272-440)||(3169588-3169758)
chr5 (320-440)||(3458820-3458941)
chr5 (253-422)||(35927470-35927642)
chr5 (108-210)||(40011834-40011936)
chr5 (223-432)||(17366739-17366950)
chr5 (151-354)||(1694860-1695066)
chr5 (267-440)||(2599203-2599379)
chr5 (147-294)||(22283704-22283849)
chr5 (108-210)||(19400809-19400910)
chr5 (113-210)||(3169984-3170080)
chr5 (108-196)||(3169766-3169854)
chr5 (174-284)||(17195314-17195423)
chr5 (108-210)||(40012063-40012163)
chr5 (108-210)||(1971811-1971912)
chr5 (108-210)||(3601787-3601888)
chr5 (351-423)||(1693382-1693455)
chr5 (112-210)||(3459240-3459337)
chr5 (146-202)||(12743168-12743225)
chr5 (341-440)||(12742699-12742799)
chr5 (147-202)||(12805987-12806043)
chr5 (156-202)||(12806332-12806379)
chr5 (336-440)||(12805517-12805622)
chr5 (385-440)||(7082276-7082332)
chr5 (156-202)||(12743511-12743558)
chr5 (113-206)||(7082671-7082763)
chr5 (147-204)||(10398273-10398330)
chr5 (157-206)||(12742909-12742957)
chr5 (146-206)||(36311871-36311932)
chr5 (146-206)||(18308742-18308801)
chr5 (147-210)||(33371112-33371175)
chr5 (223-281)||(12742818-12742876)
chr5 (176-206)||(13131035-13131065)
chr5 (153-206)||(36349990-36350043)
chr5 (150-206)||(1695519-1695575)
chr5 (147-195)||(2599483-2599532)
chr5 (157-206)||(12805727-12805775)
chr5 (150-206)||(35566000-35566056)
chr5 (150-206)||(36349745-36349801)
chr5 (157-205)||(4723682-4723728)
chr5 (113-204)||(11347157-11347247)
chr5 (323-442)||(12067697-12067817)
[»] chr4 (89 HSPs)
chr4 (108-436)||(31824516-31824847)
chr4 (108-440)||(51027654-51027989)
chr4 (108-406)||(21711550-21711850)
chr4 (108-440)||(25762583-25762918)
chr4 (108-432)||(45939518-45939846)
chr4 (108-440)||(51428079-51428414)
chr4 (108-435)||(33163431-33163761)
chr4 (108-434)||(14330583-14330910)
chr4 (108-379)||(27759374-27759647)
chr4 (146-440)||(1226145-1226441)
chr4 (151-440)||(242346-242638)
chr4 (112-440)||(46816416-46816745)
chr4 (112-440)||(49063964-49064295)
chr4 (109-440)||(37866391-37866726)
chr4 (151-432)||(20901598-20901882)
chr4 (147-440)||(21017105-21017399)
chr4 (147-440)||(40353701-40353995)
chr4 (129-427)||(55796741-55797039)
chr4 (147-440)||(20778796-20779091)
chr4 (151-432)||(32937834-32938116)
chr4 (108-440)||(1042736-1043068)
chr4 (129-440)||(41794473-41794784)
chr4 (108-440)||(39588914-39589248)
chr4 (151-440)||(43889428-43889721)
chr4 (129-440)||(6177226-6177537)
chr4 (129-440)||(56138895-56139206)
chr4 (151-440)||(22436896-22437189)
chr4 (108-440)||(9489664-9489997)
chr4 (129-440)||(49094730-49095041)
chr4 (151-440)||(21169436-21169729)
chr4 (108-440)||(28082223-28082556)
chr4 (223-440)||(49791938-49792158)
chr4 (151-440)||(957384-957677)
chr4 (223-440)||(26591687-26591907)
chr4 (151-440)||(34153215-34153508)
chr4 (157-433)||(17211258-17211536)
chr4 (223-440)||(47657357-47657577)
chr4 (157-440)||(18412580-18412864)
chr4 (225-440)||(2772994-2773212)
chr4 (150-440)||(49817572-49817866)
chr4 (151-440)||(44560109-44560402)
chr4 (151-440)||(6282252-6282545)
chr4 (223-440)||(34529798-34530018)
chr4 (151-440)||(36776448-36776741)
chr4 (147-440)||(3393289-3393581)
chr4 (223-440)||(4785424-4785644)
chr4 (151-440)||(24606737-24607027)
chr4 (151-440)||(49423686-49423980)
chr4 (216-432)||(11288288-11288506)
chr4 (182-440)||(10312257-10312517)
chr4 (223-433)||(42886255-42886471)
chr4 (174-440)||(13850734-13851002)
chr4 (151-432)||(31324167-31324450)
chr4 (174-440)||(13866248-13866516)
chr4 (108-210)||(20901335-20901436)
chr4 (108-210)||(27759774-27759875)
chr4 (113-210)||(38132779-38132875)
chr4 (147-202)||(17211773-17211829)
chr4 (113-204)||(51427858-51427948)
chr4 (108-210)||(25763045-25763146)
chr4 (108-210)||(45939972-45940073)
chr4 (108-206)||(14330358-14330455)
chr4 (113-210)||(21711981-21712077)
chr4 (113-210)||(39589379-39589475)
chr4 (172-301)||(49817150-49817277)
chr4 (146-206)||(18413073-18413134)
chr4 (341-433)||(21412647-21412740)
chr4 (150-206)||(49817307-49817363)
chr4 (147-210)||(37866891-37866954)
chr4 (131-210)||(46816184-46816262)
chr4 (111-202)||(242105-242194)
chr4 (165-202)||(21411842-21411879)
chr4 (150-206)||(42886753-42886809)
chr4 (153-204)||(26591581-26591632)
chr4 (157-205)||(49423364-49423410)
chr4 (108-199)||(51027437-51027527)
chr4 (167-202)||(21411566-21411601)
chr4 (128-210)||(56139375-56139456)
chr4 (176-210)||(885320-885354)
chr4 (108-193)||(31824305-31824389)
chr4 (113-206)||(49064431-49064523)
chr4 (147-199)||(13855022-13855075)
chr4 (146-206)||(24607211-24607271)
chr4 (147-199)||(31324703-31324756)
chr4 (157-205)||(2773563-2773609)
chr4 (174-202)||(9717840-9717868)
chr4 (153-204)||(22437401-22437452)
chr4 (157-205)||(34529403-34529449)
chr4 (153-204)||(49791602-49791653)
[»] chr6 (39 HSPs)
chr6 (108-417)||(35058620-35058932)
chr6 (108-439)||(801156-801487)
chr6 (108-440)||(29108129-29108463)
chr6 (108-440)||(29066542-29066876)
chr6 (108-440)||(29075555-29075889)
chr6 (129-440)||(27640169-27640480)
chr6 (151-440)||(13402522-13402815)
chr6 (129-440)||(6205473-6205784)
chr6 (108-440)||(29110526-29110861)
chr6 (147-440)||(11692440-11692734)
chr6 (151-440)||(32027555-32027848)
chr6 (223-440)||(12396765-12396985)
chr6 (223-437)||(34802896-34803113)
chr6 (153-433)||(14115033-14115313)
chr6 (223-440)||(32037687-32037907)
chr6 (253-440)||(22305785-22305975)
chr6 (151-371)||(30257506-30257729)
chr6 (108-301)||(3765672-3765866)
chr6 (147-294)||(24021023-24021168)
chr6 (147-294)||(2192535-2192680)
chr6 (147-256)||(34134827-34134935)
chr6 (174-301)||(17465287-17465413)
chr6 (147-210)||(35058393-35058456)
chr6 (113-206)||(801618-801710)
chr6 (145-206)||(20192543-20192605)
chr6 (145-206)||(20242049-20242111)
chr6 (145-206)||(22136033-22136095)
chr6 (145-206)||(22143386-22143448)
chr6 (153-204)||(12397270-12397321)
chr6 (147-206)||(14482746-14482806)
chr6 (128-210)||(6205953-6206034)
chr6 (151-262)||(35021164-35021276)
chr6 (153-202)||(4495397-4495446)
chr6 (157-206)||(13403313-13403362)
chr6 (157-210)||(14123099-14123152)
chr6 (156-206)||(14123421-14123470)
chr6 (113-210)||(29067007-29067103)
chr6 (113-210)||(29108594-29108690)
chr6 (150-206)||(4495615-4495671)
[»] scaffold0192 (2 HSPs)
scaffold0192 (108-427)||(17802-18123)
scaffold0192 (113-204)||(17581-17671)
[»] scaffold0176 (2 HSPs)
scaffold0176 (108-440)||(1777-2111)
scaffold0176 (108-210)||(2238-2339)
[»] scaffold0181 (1 HSPs)
scaffold0181 (304-440)||(24892-25029)
[»] scaffold0004 (2 HSPs)
scaffold0004 (308-440)||(63963-64095)
scaffold0004 (151-281)||(64098-64226)
[»] scaffold0031 (1 HSPs)
scaffold0031 (147-294)||(85462-85607)
[»] scaffold0861 (2 HSPs)
scaffold0861 (108-210)||(2402-2503)
scaffold0861 (151-184)||(2200-2233)
[»] scaffold0268 (1 HSPs)
scaffold0268 (147-282)||(14616-14749)
[»] scaffold0859 (1 HSPs)
scaffold0859 (172-202)||(1169-1199)
[»] scaffold1700 (2 HSPs)
scaffold1700 (108-176)||(46-114)
scaffold1700 (156-208)||(384-436)


Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 77 - 440
Target Start/End: Complemental strand, 47269251 - 47268886
Alignment:
Q  77 tatttgaattaaaactcaaaaagggcggatgaaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatt 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |  || ||||||||||||||||||||||||||    
T  47269251 tatttgaattaaaactcaaaaagggcggatgaaggaaaaacatgaacgtttggcgaaatacttgaattagggtcgtttggcaagtttgaattaccccatt 47269152  T
Q  177 tcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctc 276  Q
    ||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47269151 tcacaggtaagctaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctc 47269052  T
Q  277 agcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgata 374  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47269051 agcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgata 47268952  T
Q  375 ctctcccctcgtcgagcgttggatgtttatacgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  47268951 ctctcccctcgtcgagcgctggacgtttatacgaacgtattccaccctccttgcgtctctggggtt 47268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 108 - 436
Target Start/End: Complemental strand, 18237886 - 18237555
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||| ||||||| ||||| |||||||||| |||| |  ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  18237886 aaggaaaaatatgaacgatgggccaaatgcttgagtcatggccgtttggcaagtttgagttaccccaattcagaggtaagacaattgttgtagttggaat 18237787  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||||||||||||| |||||||||||| || |||| ||||||||||||||||||||||| |||||  |||||    
T  18237786 gcaccttaccctaactaatgacgatcttctggcggaatcaaactgttgatgatatcttcagttgatctcagcaacgttacccgcataccgatccactgga 18237687  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| || |||||||    
T  18237686 acatgatgtgctcccaaaatatgctcgtcatgttttcgtcgttctttaactccacccaagtgaatgatcctctccccttgtcgagcgttagacgtttata 18237587  T
Q  406 -cgaacgtattccaccctccttgcgtctctgg 436  Q
     ||||||||||||||| |||||||||||||||    
T  18237586 ccgaacgtattccaccatccttgcgtctctgg 18237555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 39477125 - 39477460
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||||| || | |  |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  39477125 aaggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagcggtaagataattgttgtagttggaat 39477224  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| |||||||||||| ||||| ||||||| ||||||| ||||||||||||| |||||||||||||||  |||||    
T  39477225 gcaccttaccctaactaatgacgatcttctggcggaatcaagttgttaatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactgga 39477324  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  39477325 acatgttgtgctcccaaaacatgctcgtcatgttttcgtcgttctttaattccacccaagtgaatgatatcctcccctcgtcgagcgttggacgtttata 39477424  T
Q  406 c-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||||| |||||||||||||| || |||||||||    
T  39477425 ctgaacgtgttccaccctccttgtgtatctggggtt 39477460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 48220629 - 48220962
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||||||| |||||||||||| |||| |  ||||| ||||||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  48220629 aaggaaaaacatgaacgttggacgaaatgcttgagtcatggccgtttgacaagtttgaattagcccatttcagagctaagataattgttgtagttggaat 48220728  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||| ||||||||  |||||||||||| || |||| ||||||||| ||| ||| |||||| ||||  |||||    
T  48220729 gcaccttaccctaactaatgacgatcttatggtggaatcaagctgttgatgatatcttcagttgatctcagcaccgtcacctgcatattgatccactgga 48220828  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  48220829 acatgctgtgctccc--aacatgctcgtcacgttttcgtcgttctttaactccaccaaagtgaatgatactctcccctcgtcgagcgttggacgtttata 48220926  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||||||||||||||||||| |||||||||||    
T  48220927 ccgaacgtattccaccctccttgcatctctggggtt 48220962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 34141186 - 34140852
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| ||| |||||||||||| |||| |  ||||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  34141186 aaggaaaaacatgaacgctgg-cgaaatgcttgagtcatggccgtttgacaagtttgaattaccccaattcagaggtaagagaattgttgcagttggaat 34141088  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||||| ||||||| | |||||||||| || |||| ||||||||||||| |||||||||||||||  |||||    
T  34141087 gcaccttaccctaactaatgacgatcttatggcgaaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactgga 34140988  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||  ||||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34140987 acatgttgtgctcccaaaacatgtccgtcacgttttcgtcgtttgttaattccacccaaatgaatgatactctcccctcgtcgagcgttggatgtttata 34140888  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||  | |||||||||||||| |||||| |||||    
T  34140887 ccgaaattgttccaccctccttgtgtctctagggtt 34140852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 152 - 432
Target Start/End: Complemental strand, 41217892 - 41217609
Alignment:
Q  152 tttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaatt 251  Q
    ||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||| ||| |||||||| ||    
T  41217892 tttggtaagtttgaattaccccatatcagaggtaagacaattgctgtagttggaatgcaccttaccctaactaatgacgatcttctggtggaatcaagtt 41217793  T
Q  252 gttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttc 349  Q
    ||||||||||| || |||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| || |||| ||||||||||||    
T  41217792 gttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgttcttcactttttcgtcgttc 41217693  T
Q  350 tttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtct 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||  ||||||||||||||| ||||    
T  41217692 tttaactccacccaagtgaatgatactctcccctcgtcgagcgttgaatttttataccgaactaattccaccctccttgtgtct 41217609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 108 - 434
Target Start/End: Complemental strand, 17183537 - 17183205
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||  ||| |||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17183537 aaggaaaaacatgaacactggacgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaat 17183438  T
Q  208 gcatcttaccctaattaatgac---gatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ct 302  Q
    ||| || ||||||| |||||||   |||||| |||| |||||||| | |||||||||| || |||| ||||||||||| | |||||||||||||||  ||    
T  17183437 gcacctcaccctaactaatgacgatgatcttctggcagaatcaaacttttgatgatatcttcagttgatctcagcaacatcacccgcatatcgatccact 17183338  T
Q  303 ggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgttt 402  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  17183337 ggaacatgttgtgcttccaaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattcttccctcgtcgagtgttggacgttt 17183238  T
Q  403 ata-cgaacgtattccaccctccttgcgtctct 434  Q
    ||| | ||||| || ||||||||||| ||||||    
T  17183237 ataccaaacgtgttacaccctccttgtgtctct 17183205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 30360836 - 30360504
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |||||||||| || ||||    |||| |||||||||||||||||||||| |||||||| |||||||||| ||| ||||||||||    
T  30360836 aaggaaaaacatgaatgttgggcgaa-tg-ttgaggacttgtcgtttggcaagtttgaattacccaatttcagatgtaagacaatagttatagttggaat 30360739  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgga 305  Q
    |||  ||||||||| ||||||||||||| ||||||||||||| | || ||||||| || |||| ||||||||||||  ||||||||||| ||||  | ||    
T  30360738 gcacattaccctaactaatgacgatcttctggcggaatcaaactttttatgatatcttcagttgatctcagcaacgc-acccgcatatcaatccactaga 30360640  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |  ||||||    
T  30360639 acatgttgtgctcccaaaacatgctcgttacgttttcgtcgttttttaattccacccaagtgaatgatactctcccctcgtcgagcgttgtacatttata 30360540  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||||||||||||||||||||| |||| |||||||    
T  30360539 ccgaacgtattccaccctccttgtgtctatggggtt 30360504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 40588870 - 40588536
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||| ||||| |  | ||||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||    
T  40588870 aaggaaaaatatgaatgccgagcgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaa 40588773  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||||| | ||||||||||||| |||| ||||||| ||||||||||||| || |||| |||||| |||||||||||||||||||||||  |||    
T  40588772 tgcaccttaccctgactaatgacgatcttctggccgaatcaagttgttgatgatatcttcagttgatctcaacaacgttacccgcatatcgatccactgg 40588673  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||| |||| |||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  40588672 aacatgttgtgctcccaaaacatgctcatcatgttttcgtcgttcgttaattccacccaagcgaatgaaactctcccctcgtcgagcgttggacgtttat 40588573  T
Q  405 a-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||| || |||||||||||||| |||||| |||||    
T  40588572 accgaaggtgttccaccctccttgtgtctctagggtt 40588536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 157 - 440
Target Start/End: Original strand, 20378639 - 20378923
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttga 256  Q
    |||||||||||| ||||||  |||||| |||||||||||||||||||||||||| ||||| |||| |||||| |||||| |||||||||||| ||||| |    
T  20378639 caagtttgaattgccccatc-cagagg-aagacaattgttgtagttggaatgcaccttactctaactaatgatgatcttctggcggaatcaagttgttaa 20378736  T
Q  257 tgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaa 354  Q
    | |||| || |||| ||||||||||| | |||||||||||  |||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20378737 ttatatcttcagttgatctcagcaacatcacccgcatatctgtccactggaacatgttgtgctcccaaaacatgttcgtcacgttttcgtcgttctttaa 20378836  T
Q  355 ctccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||||||||||| |||||||||| | || ||||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  20378837 ctccacccaagtgaatgataccctcccctcgttgtgcattggacgtttataccgaacgtattccaccctccttgtgtctctggggtt 20378923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 129 - 440
Target Start/End: Complemental strand, 20565057 - 20564746
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  20565057 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 20564961  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||    
T  20564960 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 20564861  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  20564860 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 20564761  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  20564760 tgtgtctctggggtt 20564746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 17839644 - 17839310
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | |||||||||| || || | ||||||||||| ||||||||| | | |||| || ||| ||||||||||||||||||||||    
T  17839644 aaggaaaaacatgaatgccgagcgaaatgctcgagtcct-gttgtttggcaggtttgaatttatctcatt-caaagg-aagacaattgttgtagttggaa 17839548  T
Q  207 tgcatcttaccctaattaatgacgatctttt-ggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tg 303  Q
    |||| |||||||||| ||||||||||||||| |||||||||||| | |||||||||| || | || |||| |||||| | ||||||||||||||||  ||    
T  17839547 tgcaccttaccctaactaatgacgatctttttggcggaatcaaacttttgatgatatcttcaattgatctaagcaacttcacccgcatatcgatccactg 17839448  T
Q  304 gaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgttta 403  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  17839447 gaacatgctgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcatcgagcgttggacgttta 17839348  T
Q  404 -tacgaacgtattccaccctccttgcgtctctggggtt 440  Q
     | | ||||| ||||||| |||||| ||||||||||||    
T  17839347 ttccaaacgtcttccaccatccttgtgtctctggggtt 17839310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 154 - 440
Target Start/End: Complemental strand, 48270925 - 48270635
Alignment:
Q  154 tggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg--cat-cttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    |||||||||||||||||||||||  | | | ||||||||||||||||||||||||  ||| | | || ||  ||| ||||||||| |||||||||||||     
T  48270925 tggcaagtttgaattaccccatt--aaaagaaagacaattgttgtagttggaatgtgcattcattccgtacctaacgacgatcttctggcggaatcaaac 48270828  T
Q  251 tgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 348  Q
    | |||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  48270827 ttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 48270728  T
Q  349 ctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||| ||||| |||||||||||||||||||||||||||||||||||| || |||| ||||||| |||||||||||||  ||||||||||||    
T  48270727 cgttaattccactcaagtgaatgatactctcccctcgtcgagcgttggacgtctataccgaacgtgttccaccctccttttgtctctggggtt 48270635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 126 - 336
Target Start/End: Original strand, 2205940 - 2206152
Alignment:
Q  126 tgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaa 225  Q
    |||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||    
T  2205940 tgggcgaaatgcttgagtcatggtcgtttgacaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcaccttatcctaactaa 2206039  T
Q  226 tgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaa 323  Q
    |||||||||| ||||||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  2206040 tgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatattgtgctcccaaa 2206139  T
Q  324 acatgctcgtcac 336  Q
    |||||||||||||    
T  2206140 acatgctcgtcac 2206152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 2356566 - 2356276
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaa 248  Q
    |||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||  ||||| |  |||||  |||| ||| |||| | ||||||||||    
T  2356566 gtttagcaagtttgaatttcc--atttcagaggtaagacaattgttgtagttggaagatgcattt--ccctacctaatcacggtcttatagcggaatcaa 2356471  T
Q  249 attgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcg 346  Q
    ||| |||||||||| || |||| |||||| ||||||||| |||||||||||||  ||||||||| ||| ||||||||||||||||||||| |||| ||||    
T  2356470 atttttgatgatatcttcagttgatctcaacaacgttactcgcatatcgatccattggaacatgctgttctcccaaaacatgctcgtcacatttttgtcg 2356371  T
Q  347 ttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||| |||| |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| |||||| |||||    
T  2356370 ttcgttaattccatccaagtgaatgatactctcccctcttcgagcgttggatgtttataccgaacgtgttccaccctccttgtgtctctagggtt 2356276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 129 - 440
Target Start/End: Complemental strand, 10523367 - 10523055
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || || ||||||| ||||||||||||||| |||| || ||| ||||||||||||||||||||||| || |||||||||| ||||||    
T  10523367 gcgaaatgcttgagtcctt-ttgtttgacaagtttgaattaccacatt-caaagg-aagacaattgttgtagttggaatacaccttaccctaactaatga 10523271  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcct---ggaacatgttgtgctcccaaaac 325  Q
    |||| ||  |||||||||||| | |||||||||| || |||| |||| || ||| | ||||||||||||||||    | ||||||| |||||||||||||    
T  10523270 cgattttcaggcggaatcaaacttttgatgatatattcagttgatctaagaaacttcacccgcatatcgatccacaagaaacatgtggtgctcccaaaac 10523171  T
Q  326 atgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcc 424  Q
    |||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||| |||    
T  10523170 atgctcgtcacgttttcgtcgttcgttaattccaacaaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatcc 10523071  T
Q  425 ttgcgtctctggggtt 440  Q
    ||| |||||| |||||    
T  10523070 ttgtgtctctagggtt 10523055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 41049063 - 41048770
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||| ||||||||||||||||||||| || ||| |||||||||||||||| |||||  ||||| | |  | ||  ||||||||||||| |||||||||||    
T  41049063 gttttgcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaaggtgcattcatttcgtacctaatgacgatcttctggcggaatca 41048966  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  41048965 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcgcgttttcgtc 41048866  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| ||||| |||||||  |||||| |||||    
T  41048865 gttcgttaattccacccaagtgaatgatactctcacctcgtcgagcgttggacgtttataccgaacgtgttccatcctccttctgtctctagggtt 41048770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 45363138 - 45363463
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | ||||||||||||| || | |||||||| || ||||||||| | | |||| || ||||||||||||||||| ||||||||    
T  45363138 aaggaaaaacatgaatgccgagcgaaatgcttgagtcct-gttgtttgacaggtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaa 45363235  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||||||| ||||||||||||| |||||||||||| ||||||||||||| || |||| |||||||||||||         ||||||||  |||    
T  45363236 tgcaccttaccctaactaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgt---------atcgatccactgg 45363326  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||| |||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||| ||||||  |||||||||||||||| ||||||    
T  45363327 aacatgatgtgctcccaaaacatgctcgtcacgttttcgtcatttgttaattccacccaagtgaatgaaactctctgctcgtcgagcgttggacgtttat 45363426  T
Q  405 ac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    || ||| || |||||||||||||| ||||||||||||    
T  45363427 actgaaggtgttccaccctccttgtgtctctggggtt 45363463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 46862121 - 46862414
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||||||||||||||||||||||||  | ||  |||||||||||||||  |||||  ||||| | | || ||  | ||||||||||| |||||||||||    
T  46862121 gtttggcaagtttgaattaccccattcaaaag--aagacaattgttgtatctggaaggtgcattcattccgtaccttatgacgatcttctggcggaatca 46862218  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | ||||| |||| || |||||||||||||||||| || |||||||||||||  ||||||||| ||||||||||||||| ||||||||||||||||||    
T  46862219 aacttttgatcatatcttcagttaatctcagcaacgtcactcgcatatcgatccactggaacatgctgtgctcccaaaacaagctcgtcacgttttcgtc 46862318  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||  ||||||||||||    
T  46862319 gttcgttaattccatccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttctgtctctggggtt 46862414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 36393751 - 36394044
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| ||||||||||| |||| |||||  ||||| | | |  ||  |||||| |||||| |||||||||||    
T  36393751 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgtcgtagctggaaggtgcattcattcagtacctaatgaagatcttatggcggaatca 36393848  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||    
T  36393849 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatattgtgctcccaaaacatgctcgtcacgttttcgtc 36393948  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| ||||| ||||||||||||| ||||||||||||||| |||||| ||||||| ||||||| |||||||||||||| |||| |||||||    
T  36393949 gttcgttaattccacacaagtgaatgatattctcccctcgtcgagtgttggacgtttataccgaacgtgttccaccctccttgtgtctttggggtt 36394044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 48315107 - 48315400
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || | | |||||||| ||||||| |||||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  48315107 gtttggcaagtttgaattaccccatt-caaatg-aagacaatcgttgtagctggaaggtgcattcattccgtacctaatgacgatcttatggcggaatca 48315204  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  48315205 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatctactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 48315304  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||| |||||| ||||| |||||||||| ||||||| | ||||| |||||||||||||   |||||||||||    
T  48315305 gttcgttaattccacccaagtgaatgatgctctcctctcgttgagcgttggacgtttataccaaacgtgttccaccctccttctatctctggggtt 48315400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 15337832 - 15338125
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||| ||||| |||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  15337832 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttttagttagaaggtgcattcattccatacctaatgacgatcttctggcggaatca 15337929  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
     | |||| || |||| || |||| ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||||    
T  15337930 gactgtttataatatcttcagttgatctcagcaacgttacccgcatatcgatccactgaaacatgttgtgctcccaaaacatgctcatcacgttttcgtc 15338029  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||  |||| ||||||||| ||||||||||||||||||||| |||||||| |  |||||| ||||||| |||||||||||||| ||||||||||||    
T  15338030 gtttgttaattccacccaactgaatgatactctcccctcgttgagcgttgaacatttataccgaacgtgttccaccctccttgtgtctctggggtt 15338125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 21187299 - 21187519
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| || |||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||  | |||||||||||||||||    
T  21187299 taatgacgatcttctgacggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactagaacatgttgtgctccc 21187398  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||||||||||||||||||||  || |||| || ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || |||    
T  21187399 aaaacatgctcgtcacgttttcgtcaatcgttaattctacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgtttcac 21187498  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  21187499 cctccttgtgtctctggggtt 21187519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 151 - 439
Target Start/End: Original strand, 43351027 - 43351318
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||||||||||||||||||| |||| || ||| |||||||||||||||| |||||  ||||| | | |  ||  ||||||||||||| ||| |||||||    
T  43351027 gtttggcaagtttgaattacctcatt-caaagg-aagacaattgttgtagctggaaggtgcattcattctgtacctaatgacgatcttctggtggaatca 43351124  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
     |   |||||||||| || |||| ||||||||||||| |||| |||||||||||  |||||||||||||||||||||||||||||||||| |||||||||    
T  43351125 gacatttgatgatatcttcagttgatctcagcaacgtcaccc-catatcgatccactggaacatgttgtgctcccaaaacatgctcgtcatgttttcgtc 43351223  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggt 439  Q
    |||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| |||||||||||||| |||||||||||    
T  43351224 gttcgttaattccacccaagtgaatgatactctcccctcatcgagcgttggacgtttatactgaacgtgttccaccctccttgtgtctctggggt 43351318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 28114393 - 28114613
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||| |||||||| | |||||||||| |||||||||| || |||| ||||||||||||| |||| ||| |||||||  ||||||||||||||||||     
T  28114393 taatgacaatcttttgacagaatcaaatttttgatgatatcttcagttgatctcagcaacgtcacccacatttcgatccattggaacatgttgtgctcct 28114492  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||| ||||||    
T  28114493 aaaacatgctcgtcatgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgggcgttggacgtttataccgaacgtgttccac 28114592  T
Q  420 cctccttgcgtctctggggtt 440  Q
    ||||||||  |||||||||||    
T  28114593 cctccttgtttctctggggtt 28114613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 185 - 433
Target Start/End: Original strand, 21614722 - 21614973
Alignment:
Q  185 aagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgt 284  Q
    ||||||||||||||||||| || |    || |||||  |||| |||| ||| ||||||||||||| | |||||||||| || |||| |||||||||||||    
T  21614722 aagacaattgttgtagttgaaaggtgcatttccctacctaatcacgaacttctggcggaatcaaaattttgatgatatcttcagttgatctcagcaacgt 21614821  T
Q  285 tacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccc 382  Q
    |||||||||||||||||  | ||||||| ||||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||||||||||||| |||    
T  21614822 tacccgcatatcgatccactagaacatgatgtgctcccaaaacatgctcgtcgcgttttcgtcgttcgttaattccacccaaatgaatgatactcttccc 21614921  T
Q  383 tcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctc 433  Q
    ||||||||||||| | ||||||| ||||||| |||||||||||||| |||||    
T  21614922 tcgtcgagcgttgaacgtttatatcgaacgtgttccaccctccttgtgtctc 21614973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 157 - 433
Target Start/End: Original strand, 1642525 - 1642800
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgtt 254  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||  |||||    |||||  |||| |||||||| ||||||||||||| ||||    
T  1642525 caagtttgaatt--cccatttca-aggtaagacaattgttgtagttggaaggtgcatt---ccctacctaatcacgatcttctggcggaatcaaactgtt 1642618  T
Q  255 gatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcttt 352  Q
    ||| |||| || |||| |||||| ||||||||| |||||||||||||  | |||||||||||||||||||||||||||| |||||||||| |||||| ||    
T  1642619 gataatatcttcagttgatctcaacaacgttacacgcatatcgatccacttgaacatgttgtgctcccaaaacatgctcctcacgttttcatcgttcgtt 1642718  T
Q  353 aactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctc 433  Q
    || ||||||||| | ||||||| ||||||||||||||| |||| | ||||||| | |||||||||||||||||||| |||||    
T  1642719 aattccacccaactaaatgatattctcccctcgtcgagtgttgaacgtttatatcaaacgtattccaccctccttgtgtctc 1642800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 42735542 - 42735250
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||||||||||||||||||| |||| || ||| |||||||||||||||| |||||  ||||| | | |  ||  ||||||||||||| | |||||||||    
T  42735542 gtttggcaagtttgaattaccacatt-caaagg-aagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatcttcttgcggaatca 42735445  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| |||||||||||||| |  | ||| ||||||||||||||||||||||||||||||||||||||    
T  42735444 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgattcactagaatatgttgtgctcccaaaacatgctcgtcacgttttcgtc 42735345  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| ||||||||||||||||||| ||| ||| | |||||||||||| ||||||| ||||||| |||||||||||||  ||||||||||||    
T  42735344 gttcgttaattccacccaagtgaatgataatcttccc-catcgagcgttggacgtttataccgaacgtgttccaccctccttctgtctctggggtt 42735250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 223 - 433
Target Start/End: Complemental strand, 21650731 - 21650518
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    |||||| |||||| ||||||||||| | ||||||| |||| || |||| |||||||||||||||||| |||||||||||  |||||||||||||| ||||    
T  21650731 taatgatgatcttatggcggaatcagactgttgataatatcttcagttgatctcagcaacgttacccacatatcgatccactggaacatgttgtgatccc 21650632  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat-acgaacgtattccac 419  Q
    | |||||||||||||| |||||||||||| |||| ||| ||||| |||||||||||||||||||||||||||||||| |||||| | |||||| ||||||    
T  21650631 ataacatgctcgtcacattttcgtcgttcgttaattcctcccaactgaatgatactctcccctcgtcgagcgttggacgtttataatgaacgtgttccac 21650532  T
Q  420 cctccttgcgtctc 433  Q
    |||||||| |||||    
T  21650531 cctccttgtgtctc 21650518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 223 - 406
Target Start/End: Original strand, 30354815 - 30355000
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    |||||||||||||||||| |||||||| | |||||||||| || || | ||||||||||||| | || |||||||||||  |||||||||||||||||||    
T  30354815 taatgacgatcttttggcagaatcaaacttttgatgatatcttcagctgatctcagcaacgtcatccacatatcgatccactggaacatgttgtgctccc 30354914  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac 406  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  30354915 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatacgctcccctcgtcgaacgttggacgtttatac 30355000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 129 - 344
Target Start/End: Original strand, 9367029 - 9367243
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  9367029 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 9367125  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | |||||||||||||||  |||||||||| |||||||||||||||    
T  9367126 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 9367225  T
Q  327 tgctcgtcacgttttcgt 344  Q
    || |||||||||||||||    
T  9367226 tggtcgtcacgttttcgt 9367243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 286 - 440
Target Start/End: Original strand, 26603268 - 26603425
Alignment:
Q  286 acccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccct 383  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |    
T  26603268 acccacatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgctctttaattccacccaagtgaatgataccctccctt 26603367  T
Q  384 cgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| ||||||| ||||    
T  26603368 cgtcgagcgttggacgtttataccgaacgtattccaccctccttgtgtctctgaggtt 26603425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 267 - 440
Target Start/End: Original strand, 28979066 - 28979242
Alignment:
Q  267 agttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaa 364  Q
    |||| ||||||||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| |||| || |||| | |||||||    
T  28979066 agttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgtttttgtcgctcgttaatttcacccaa 28979165  T
Q  365 gtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||||| |||||||||||||| |||| |||||||    
T  28979166 gtgaatgatactctcctctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctatggggtt 28979242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 284
Target Start/End: Original strand, 26601706 - 26601839
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||     
T  26601706 gtttgacaagtttgaattaccccatttcagaggtaagataattgttgtagttggaatgcaccttaccctaactaatgacgatcttctggcggaatcaaac 26601805  T
Q  251 tgttgatgatatttttagttaatctcagcaacgt 284  Q
    | |||||||||| || |||| |||||| ||||||    
T  26601806 tattgatgatatcttcagttgatctcaacaacgt 26601839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 147 - 301
Target Start/End: Complemental strand, 13920587 - 13920435
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  13920587 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcatcttaccctaactaatgacgatcttatggcgaaatc 13920490  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc 301  Q
    ||||| |||||||||| || |||| |||| |||||| | ||| ||||||||||||    
T  13920489 aaatttttgatgatatcttcagttgatctaagcaacttcacctgcatatcgatcc 13920435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 28978943 - 28979064
Alignment:
Q  114 aaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatct 213  Q
    ||||||||| || | ||||||||||| | || | | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  28978943 aaacatgaatgtcgagcgaaatgctttagtcctggctgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaatgcacct 28979042  T
Q  214 taccctaattaatgacgatctt 235  Q
    |||||||| |||||||||||||    
T  28979043 taccctaactaatgacgatctt 28979064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 312 - 440
Target Start/End: Complemental strand, 13916949 - 13916820
Alignment:
Q  312 tgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaac 410  Q
    ||||||||||||||||| || |||| |||| ||| ||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||| | ||     
T  13916949 tgtgctcccaaaacatggtcatcacatttttgtcattcgttaattcaacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaat 13916850  T
Q  411 gtattccaccctccttgcgtctctggggtt 440  Q
    || ||||||| |||||| ||||||||||||    
T  13916849 gtgttccaccatccttgtgtctctggggtt 13916820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 282
Target Start/End: Original strand, 17320137 - 17320260
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttga 256  Q
    ||||||||||||||||||||| | ||| |||||||||||||||||||||||||| |||||||||| |||||||||| || |||| |||||||| | ||||    
T  17320137 caagtttgaattaccccatttaa-agg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgattttatggcagaatcaaacttttga 17320234  T
Q  257 tgatatttttagttaatctcagcaac 282  Q
    |||||| || |||| |||| ||||||    
T  17320235 tgatatcttaagttgatctaagcaac 17320260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 440
Target Start/End: Complemental strand, 42683052 - 42682943
Alignment:
Q  332 gtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgt 430  Q
    ||||||||||||| |||| |||| |||||| |||||||||||| |||||||||||||  ||||||| ||||||| ||||||| |||||||||||||| ||    
T  42683052 gtcacgttttcgttgttcgttaattccaccaaagtgaatgatattctcccctcgtcgttcgttggacgtttataccgaacgtgttccaccctccttgtgt 42682953  T
Q  431 ctctggggtt 440  Q
    ||||||||||    
T  42682952 ctctggggtt 42682943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 34139411 - 34139334
Alignment:
Q  185 aagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatat 262  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||||| | ||||||||||    
T  34139411 aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttctggcagaatcaaacttttgatgatat 34139334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 30360965 - 30361064
Alignment:
Q  109 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 208  Q
    |||||||||||||| || ||||||||||||||| || | |||||||||| | ||||||||  |||| |||| ||||||||||||||||||||||||||||    
T  30360965 aggaaaaacatgaatgtcgggcgaaatgcttgagtcct-gttgtttggcgaatttgaatttacccaattcaaaggtaagacaattgttgtagttggaatg 30361063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 18238013 - 18238114
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||||   |||||||||||||| || | |||||||||| |||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  18238013 aaggaaaaacatgaacgcgaggcgaaatgcttgagtcct-gttgtttggctagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 18238110  T
Q  207 tgca 210  Q
    ||||    
T  18238111 tgca 18238114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 48220503 - 48220402
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  ||||||||||||||| || || ||||||||||||||||||||  |||  |||| |||| ||||||||||||||||||||||    
T  48220503 aaggaaaaacatgaatgcggggcgaaatgcttgagtc-ttattgtttggcaagtttgaatttgccccattcaaaggtgagacaattgttgtagttggaat 48220405  T
Q  208 gca 210  Q
    |||    
T  48220404 gca 48220402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 17183664 - 17183765
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |   ||| |||||||||| || | ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  17183664 aaggaaaaacatgaatgcgaggcaaaatgcttgagtcct-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 17183761  T
Q  207 tgca 210  Q
    ||||    
T  17183762 tgca 17183765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 34141313 - 34141414
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||||  ||||||||| ||||| || | |||||| ||| |||||||||| || ||||| || ||||||||||||||||||||||| ||    
T  34141313 aaggaaaaacatgaacgcggggcgaaatacttgagtcct-gttgttaggccagtttgaatttactccatt-caaaggtaagacaattgttgtagttgaaa 34141410  T
Q  207 tgca 210  Q
    ||||    
T  34141411 tgca 34141414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 28978934 - 28978873
Alignment:
Q  149 ttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||| ||||||||||||  |||| |||| ||||||||||||||||| ||||||||||||    
T  28978934 ttgtttgacaagtttgaattgacccaattcaaaggtaagacaattgttggagttggaatgca 28978873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 41218066 - 41218162
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| |  ||| ||||||||||| |||| |||| ||||||||||| ||||   ||  |||| ||||||||||||||||||||||||||||||    
T  41218066 aaaacatgaatgacgggggaaatgcttgagtcat-gttgcttggcaagtttaaatttggcccattcaaaggtaagacaattgttgtagttggaatgca 41218162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 26601499 - 26601436
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||||||||||||| ||||||||  | ||||||||||||||||||| ||||||||||    
T  26601499 tgttgtttggcaagtttgaatttaccccattaaa-aggtaagacaattgttgtacttggaatgca 26601436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 48271140 - 48271193
Alignment:
Q  153 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  48271140 ttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 48271193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 1642310 - 1642257
Alignment:
Q  150 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 202  Q
    ||||| || |||||||||| ||||||||||| ||||||||||||||||||||||    
T  1642310 tgtttagccagtttgaatttaccccatttcataggtaagacaattgttgtagtt 1642257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 15337623 - 15337567
Alignment:
Q  150 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||| |||| ||| |||| |||||||||||||||||||||||||||||    
T  15337623 tgtttggcaagtttaaatttacctcatt-cagaggtaagacaattgttgtagttggaa 15337567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 3380626 - 3380707
Alignment:
Q  174 atttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttga 256  Q
    ||||||||||||||||||||||||| |||||||  ||||   | |||||  |||| |||||||| |||| |||||||||||||||    
T  3380626 atttcagaggtaagacaattgttgtcgttggaaggtgca---ttccctacctaatcacgatcttctggcagaatcaaattgttga 3380707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 4230291 - 4230346
Alignment:
Q  146 ttgttgtttggcaagtttgaatt-accccat-ttcagaggtaagacaattgttgta 199  Q
    ||||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||    
T  4230291 ttgttgtttagcaagtttgaatttaccccaaattcagaggtaagacaattgttgta 4230346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 10224559 - 10224612
Alignment:
Q  153 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  10224559 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 10224612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 20877767 - 20877714
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||| |||||||  ||||||||| |||||||||||||||||||    
T  20877767 ttggcaagtttgaatttaccccatg-cagaggtaacacaattgttgtagttggaa 20877714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 21187014 - 21186961
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  21187014 ttgggaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaa 21186961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 21651015 - 21651068
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||| | |||||| ||||||||| |||||||||||||||||||    
T  21651015 ttggcaagtttgaatttatcccatt-cagaggtaacacaattgttgtagttggaa 21651068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 20877527 - 20877471
Alignment:
Q  150 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| ||||||||||||| ||| ||||| |||||||||| |||||||||||||||||    
T  20877527 tgtttagcaagtttgaatttacctcattt-agaggtaagataattgttgtagttggaa 20877471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 21614393 - 21614440
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  21614393 caagtttgaattaccccatct-agagg-aagacaattgttgtagttggaa 21614440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 28113869 - 28113813
Alignment:
Q  150 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| ||||||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  28113869 tgtttagcaagtttgaatttaccccattt-agaggtaagataattgttgcagttggaa 28113813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 21614506 - 21614447
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||| |||||||||||| ||| |||| || |||||||| |||||||||||||||||    
T  21614506 tgttgtttgacaagtttgaatttacctcatt-caaaggtaagataattgttgtagttggaa 21614447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 28113998 - 28114044
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 205  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  28113998 caagtttgaattaccccattt-agagg-aagacaattgttgcagttgga 28114044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 28114114 - 28114055
Alignment:
Q  147 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| |||||||||||||| |||||||| |||| |||||| |||||||||| ||||||||    
T  28114114 tgttgcttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttggagttggaa 28114055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 30361245 - 30361301
Alignment:
Q  150 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| |||||||||||||  |||  ||||| || ||||||||||||||||||||||    
T  30361245 tgtttagcaagtttgaatttgccccattcaggggcaagacaattgttgtagttggaa 30361301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 42683139 - 42683198
Alignment:
Q  147 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||| ||||||||||| || |||||||| || ||||||| |||||||||||||||||    
T  42683139 tgttgtttagcaagtttgaatttgccccattt-agtggtaagataattgttgtagttggaa 42683198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 103)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 25576477 - 25576811
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| |||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25576477 aaggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 25576576  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc-tggaa 306  Q
    ||| |||||||||| ||||||||||||| || |||||||||  | |||||||||| || |||| |||||||||||||||||||||||||||||| |||||    
T  25576577 gcaccttaccctaaataatgacgatcttctgacggaatcaagctattgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccatggaa 25576676  T
Q  307 catgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata- 405  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  25576677 catgctgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgataatctcccctcgtcgagcgttggatgtttatac 25576776  T
Q  406 cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||||||||||||||||||||||||||||    
T  25576777 cgaacgtattccaccctccttgcgtctctggggtt 25576811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 126 - 440
Target Start/End: Original strand, 53826599 - 53826916
Alignment:
Q  126 tgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaa 225  Q
    |||||||||||||||| |||| |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  53826599 tgggcgaaatgcttgagtcatggccgtttgacaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcaccttaccctaactaa 53826698  T
Q  226 tgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaa 323  Q
    |||||||||| |||||||||||| ||||||||||||| || |||| ||||||||||||||||  ||||||||||||  ||||||||||||||||||||||    
T  53826699 tgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacatgcatatcgatccattggaacatgttgtgctcccaaa 53826798  T
Q  324 acatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccct 422  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  53826799 acatgctcatcacattttcgtcgttctttaactctacccaagtgaatgatactctcccctcgtcgagcattggacgtttataccgaacgtattccaccct 53826898  T
Q  423 ccttgcgtctctggggtt 440  Q
    ||||||||||||||||||    
T  53826899 ccttgcgtctctggggtt 53826916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 108 - 436
Target Start/End: Complemental strand, 47066021 - 47065690
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||| ||||||| ||| ||||||||| || | || |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47066021 aaggaaaaatatgaacgctggacgaaatgctcgagttatggccgtttggcaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaat 47065922  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| |||||||||||| ||||| ||||||| || |||| |||||||||||||||||||||||||||||  || ||    
T  47065921 gcaccttaccctaactaatgacgatcttctggcggaatcaagttgttaatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactaga 47065822  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  47065821 acatgttgtgctcccaaaacatgctcgtcacattttcctcgttctttaactccacccaagtgaatgatactctcccctcgtcaagcgttggacgtttata 47065722  T
Q  406 c-gaacgtattccaccctccttgcgtctctgg 436  Q
    | ||||||||||||||||||||| ||||||||    
T  47065721 ctgaacgtattccaccctccttgtgtctctgg 47065690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 42383385 - 42383050
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | | |||||| |||| |||| |  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42383385 aaggaaaaacatgaatgccgagtgaaatgtttgagtcatggccgtttggcaagtttgaattaccccattttagaggtaagacaattgttgtagttggaat 42383286  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||  || || ||||||||||||| |||||||||||| ||||||||||||| || |||| |||||||||||||||||||||||||||||  |||||    
T  42383285 gcaccttgtcccaactaatgacgatcttctggcggaatcaacttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactgga 42383186  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  42383185 acatgatgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagtgttggaagtttata 42383086  T
Q  406 c-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    | ||||||| |||||||||||| |||||||||||||    
T  42383085 ctgaacgtagtccaccctccttacgtctctggggtt 42383050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 42949905 - 42950240
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||| || || | || ||||||||||||| || | |  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42949905 aaggaaaaatataaatgctgagcgaaatgcttgagtcctaggcgtttggcaagtttgaattatcccatttcagaggtaagacaattgttgtagttggaat 42950004  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| |||||||||||| ||||||||||||| || |||| ||||||||||||| | |||||||||||||  |||||    
T  42950005 gcaccttaccctaactaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtaaaccgcatatcgatccactgga 42950104  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||  ||||||    
T  42950105 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcattctttaactccatccaagtgaatgatactcttccctcgtcgagcgttggacatttata 42950204  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||||||||||||| |||||||||||||||||    
T  42950205 ccgaacgtattccacccttcttgcgtctctggggtt 42950240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 112 - 440
Target Start/End: Original strand, 48087441 - 48087772
Alignment:
Q  112 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 211  Q
    ||||||||||| | || ||||||||||||| || | |  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  48087441 aaaaacatgaatgctgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccattttagaggtaagacaattgttgtagttggaatgcac 48087540  T
Q  212 cttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacat 309  Q
    |||||||||||||||||||||||| ||| ||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||  |||||| ||    
T  48087541 cttaccctaattaatgacgatcttctggtggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaatat 48087640  T
Q  310 gttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cga 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||    
T  48087641 gttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaggtgaatgatactctcccctcgtcgagcgttggacgtttataccga 48087740  T
Q  409 acgtattccaccctccttgcgtctctggggtt 440  Q
    ||  |||||||| |||||| |||| |||||||    
T  48087741 actaattccaccatccttgtgtctttggggtt 48087772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 108 - 433
Target Start/End: Original strand, 34693175 - 34693503
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| || | ||||||||||||| || | |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34693175 aaggaaaaacatgaatgtcgcgcgaaatgcttgagtcttggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaat 34693274  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| |||||||||||||||  |||||    
T  34693275 gcaccttaccctaactaatgacgatcttctggcggaatcaaagttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactgga 34693374  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||  |||||||||||||||||| |||||||    
T  34693375 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtttgttaattccacccaagtgaatgatactcaaccctcgtcgagcgttggacgtttata 34693474  T
Q  406 c-gaacgtattccaccctccttgcgtctc 433  Q
    | ||| || |||||||||||||| |||||    
T  34693475 ctgaaggtgttccaccctccttgtgtctc 34693503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 19453114 - 19453449
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| || | ||||||||||||| |||| |  ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19453114 aaggaaaaacatgaatgtcgagcgaaatgcttgagtcatggccgtttgacaagtttgaattaccccatttcagaggtaagagaattgttgtagttggaat 19453213  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgga 305  Q
    ||| |||||||||| |||||| |||||| ||| ||||||||| | |||||||||| ||||||| ||||||||||||| ||||||||||||||||  ||||    
T  19453214 gcaccttaccctaactaatgatgatcttctggtggaatcaaacttttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccattgga 19453313  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  19453314 acatgttgtgctcccataacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctccccttgtcgagcattggacgtttata 19453413  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||| |||||||||||||   |||||||||||    
T  19453414 tcgaacgtgttccaccctccttctatctctggggtt 19453449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 151 - 432
Target Start/End: Original strand, 39416876 - 39417160
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| ||||||      
T  39416876 gtttggcaagtttgaattatcccattttagaggtaagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttctggcgaaatcaagc 39416975  T
Q  251 tgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 348  Q
    | |||||||||| || |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39416976 tattgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcatcacgttttcgtcgtt 39417075  T
Q  349 ctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtct 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||||| ||||    
T  39417076 ctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaactaattccaccctccttgtgtct 39417160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 44835372 - 44835707
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||| ||||||| || | |  ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44835372 aaggaaaaacatgaatgccgagcgaagtgcttgagtcctggccgtttgacaagtttgaattaccccatttcaaaggtaagacaattgttgtagttggaat 44835471  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| || |||||||||  ||||||||||||||| |||| |||||| |||| ||||||||||||| |||  |||||    
T  44835472 gcaccttaccctaactaatgacgatcttctgacggaatcaagctgttgatgatattttcagttgatctcaacaaccttacccgcatatccatccactgga 44835571  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  44835572 acattctatgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaaatgaatgatactctcccctcgtcgaacgttgaatgtttata 44835671  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||||||||||||||||||||||||| |||||    
T  44835672 tcgaacgtattccaccctccttgcgtctctagggtt 44835707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 13895755 - 13896090
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||||| || | |  ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13895755 aaggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttgacaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaat 13895854  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||| ||| ||||||||||||| | ||||||||||  | |||||||||| || |||| ||||||||||||| |||||||||||||||  |||||    
T  13895855 gcaccttaccttaactaatgacgatcttctagcggaatcaagcttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactgga 13895954  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||| ||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13895955 acatgctgtgctcccaaaacatgctcgtcacgttttcgtcgctcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttata 13896054  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||| |||||||||||||| |||||| |||||    
T  13896055 ccgaacgtgttccaccctccttgtgtctctagggtt 13896090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 44927797 - 44927462
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||||| || |    |||||||||||||||||||||||||||   ||||||||||||||||| |||||||||    
T  44927797 aaggaaaaacatgaatgccgagcgaaatgcttgagtcctgaccgtttggcaagtttgaattaccccattttttaggtaagacaattgttgcagttggaat 44927698  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||||||||||||| | |||||||||| || |||| |||||| |||||| |||||||||||||||  |||||    
T  44927697 gcaccttaccctaactaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcaacaacgtcacccgcatatcgatccactgga 44927598  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  44927597 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattctcccctcgtcgagcgttggacgtttata 44927498  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||| |||||||||||||| ||||| ||||||    
T  44927497 ccgaacgtgttccaccctccttgtgtctccggggtt 44927462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 24702157 - 24702491
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24702157 aaggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgcagttggaat 24702256  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||||||||||||  | |||||||||| || |||| |||||| |||||| ||| |||||||||||  |||||    
T  24702257 gcaccttaccctaactaatgacgatcttctggcggaatcaagcttttgatgatatcttcagttgatctcaacaacgtcacctgcatatcgatccactgga 24702356  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||  |||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  24702357 acatgttgtgctcccaaaacatgtccgtcacgttttcgtcgttc-gtaattccacccaagtgaatgatattctcccctcgtcgagcgttggacgtttata 24702455  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||| |||||||||||||| |||| |||||||    
T  24702456 ccgaacgtgttccaccctccttgtgtctatggggtt 24702491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 184 - 440
Target Start/End: Complemental strand, 42382529 - 42382270
Alignment:
Q  184 taagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacg 283  Q
    |||||||||||||||||||||||||||  ||  || || ||||||||||||| |||||||||||| ||||||||||||| || |||| ||||||||||||    
T  42382529 taagacaattgttgtagttggaatgcacattgtcccaactaatgacgatcttctggcggaatcaacttgttgatgatatcttcagttgatctcagcaacg 42382430  T
Q  284 ttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctccc 381  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42382429 ttacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctccc 42382330  T
Q  382 ctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||| |||||| |||||||| ||||||| |||||||||||| |||||||||||||    
T  42382329 ctcgtcgagtgttggacgtttatactgaacgtagtccaccctccttacgtctctggggtt 42382270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 147 - 440
Target Start/End: Original strand, 3494955 - 3495249
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    |||||||||  ||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||    
T  3494955 tgttgtttgaaaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttctggcagaatc 3495052  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| | |||| | ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||    
T  3495053 aaacttttgatgatatcttaagttgatctaaacaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtcacgttttcgt 3495152  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||| |||||| ||||||||||||    
T  3495153 cgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttatatcaaacgtgttccaccatccttgtgtctctggggtt 3495249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 147 - 440
Target Start/End: Original strand, 2268420 - 2268714
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  2268420 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttctggcggaatc 2268517  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| |||||| | |||||||||||||||  |||||||||| |||||||||||||||||| ||||||||||||||    
T  2268518 aaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatctactggaacatgatgtgctcccaaaacatgcccgtcacgttttcgt 2268617  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| | ||| | ||||||| |||||| |||| |||||||    
T  2268618 cgttcgttaattccatccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacttgttccaccatccttgtgtctttggggtt 2268714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 147 - 440
Target Start/End: Original strand, 4004013 - 4004307
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| ||||| |||| ||||||||||||| |||| |||||    
T  4004013 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttactctaactaatgacgatcttctggcagaatc 4004110  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| ||    
T  4004111 aaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgtttttgt 4004210  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||||| |||||| ||||||||||||    
T  4004211 cgttcgttaattccacccacgtgaatgatactctcccctcgtcgagcgttgaatgtttataccaaacgtgttccaccatccttgtgtctctggggtt 4004307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 183 - 440
Target Start/End: Complemental strand, 49610748 - 49610488
Alignment:
Q  183 gtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaac 282  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||||||| || |||| |||||||||||    
T  49610748 gtaagacaattgttgcagttggaatgcaccttaccctaactaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaac 49610649  T
Q  283 gttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcc 380  Q
    || ||||||||||||| |  |||||||||  |||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||| |||||||    
T  49610648 gtcacccgcatatcgacccactggaacatactgtgctcccaaaacatgctcgtcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcc 49610549  T
Q  381 cctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||||||| ||||||| |||| || |||||||||||||| ||||||||||||    
T  49610548 cctcgtcgagcgttggacgtttatatcgaaggtgttccaccctccttgtgtctctggggtt 49610488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 147 - 440
Target Start/End: Original strand, 2646802 - 2647096
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| || ||||||||||||||||| || | | |||||||||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||    
T  2646802 tgttgtttgacaggtttgaattaccccatt-caaatg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttctagcggaatc 2646899  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||    
T  2646900 aaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttcgt 2646999  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||| ||||||| |||||| ||||||||||||    
T  2647000 cgttcgttaattccacccaagtgaatgatactctcccatcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctggggtt 2647096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 147 - 440
Target Start/End: Complemental strand, 36135300 - 36135007
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||    
T  36135300 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcatcttactctaactaatgacaatcttctggcggaatc 36135203  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| |||||| | |||||||||||||||  ||| |||||| |||||||||||||||||||||||||||||||||    
T  36135202 aaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatctactgaaacatgatgtgctcccaaaacatgctcgtcacgttttcgt 36135103  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| | ||||| ||||||| |||||| |||||| |||||    
T  36135102 cgttcgttaattccacccaagtgaatgatact-tcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctagggtt 36135007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 112 - 440
Target Start/End: Complemental strand, 43477386 - 43477056
Alignment:
Q  112 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||||| |  | ||||||||||||| || | ||||||||||| ||||||||| | | |||| || |||||||||| |||||| ||||||||||||    
T  43477386 aaaaacatgaatgccgagcgaaatgcttgactcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacagttgttgaagttggaatgca 43477289  T
Q  211 tcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaaca 308  Q
      ||||||||||||||||||||||| |||||||||||| ||||||||||||| ||  ||| |||||| |||||| ||| ||||||||||||  |||||||    
T  43477288 cattaccctaattaatgacgatcttctggcggaatcaagttgttgatgatatcttcggttgatctcatcaacgtcacctgcatatcgatccactggaaca 43477189  T
Q  309 tgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cg 407  Q
    || ||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||| |     
T  43477188 tgctgtgctcccaaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttatacca 43477089  T
Q  408 aacgtattccaccctccttgcgtctctggggtt 440  Q
    || || |||||||||||||| ||||||||||||    
T  43477088 aaggtgttccaccctccttgtgtctctggggtt 43477056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 129 - 440
Target Start/End: Original strand, 49139963 - 49140274
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  49139963 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 49140059  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||    
T  49140060 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 49140159  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  49140160 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 49140259  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  49140260 tgtgtctctggggtt 49140274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 129 - 440
Target Start/End: Complemental strand, 54390752 - 54390441
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  54390752 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 54390656  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||    
T  54390655 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 54390556  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  54390555 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 54390456  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  54390455 tgtgtctctggggtt 54390441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 129 - 440
Target Start/End: Complemental strand, 34050037 - 34049726
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  34050037 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 34049941  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||    
T  34049940 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 34049841  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||| | ||||||| | || || ||||||| ||||    
T  34049840 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttgaacgtttataccaaatgtgttccaccatcct 34049741  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  34049740 tgtgtctctggggtt 34049726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 129 - 440
Target Start/End: Complemental strand, 46403313 - 46403002
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  46403313 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 46403217  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||    
T  46403216 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 46403117  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  46403116 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 46403017  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  46403016 tgtgtctctggggtt 46403002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 46414334 - 46414554
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||  | |||||||||||||||||    
T  46414334 taatgacgatcttctggcggaatcaaacttttgatgatatcttaagttgatctcagcaacgtcacccgcatatcgatccactagaacatgttgtgctccc 46414433  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||    
T  46414434 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctccactcgtcgagcgttggatgtttataccgaacgtgttccac 46414533  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  46414534 cctccttgtgtctctggggtt 46414554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 51013205 - 51013498
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |||||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  51013205 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatcttctggcggaatca 51013302  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| |||| |||||||| |||||||||||||| |  |||||||||||||| |||||||||||||||||||||||||||||    
T  51013303 aacttttgatgatatcttcagttgatcttagcaacgtcacccgcatatcgatacactggaacatgttgtgttcccaaaacatgctcgtcacgttttcgtc 51013402  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| ||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  51013403 gttcgttaattccacccaagtgaatgatactctcccctcgttgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 51013498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 183 - 440
Target Start/End: Original strand, 51695566 - 51695826
Alignment:
Q  183 gtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaac 282  Q
    ||||||||||| ||| |||||||||||| |||||||||| |||||| |||||| |||||||||||| ||||||||||||| || |||| |||||||||||    
T  51695566 gtaagacaattattgcagttggaatgcaccttaccctaactaatgatgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaac 51695665  T
Q  283 gttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcc 380  Q
    || |||||||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||||||  |||| ||||||||||||||||| ||| | |    
T  51695666 gtcacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgtattcgtcgtttgttaattccacccaagtgaatgaaacttttc 51695765  T
Q  381 cctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||||||| ||||||| |||| || |||||||||||||| ||||||||||||    
T  51695766 cctcgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctggggtt 51695826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 176 - 440
Target Start/End: Original strand, 49218689 - 49218956
Alignment:
Q  176 ttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatct 275  Q
    |||| ||||||||||||||||| ||||||||||||  ||||||||| ||||||||||||| |||||||||||| |||||||| |||| || |||| ||||    
T  49218689 ttcaaaggtaagacaattgttgcagttggaatgcactttaccctaactaatgacgatcttctggcggaatcaagttgttgataatatcttcagttgatct 49218788  T
Q  276 cagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgat 373  Q
    ||||||||| || ||||||||||||  ||||||||||||| |||||||||||||| |||||||||||||| ||||  |||| ||||||||||||||||||    
T  49218789 cagcaacgtcactcgcatatcgatccactggaacatgttgcgctcccaaaacatgttcgtcacgttttcgccgtttgttaattccacccaagtgaatgat 49218888  T
Q  374 actctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||||||||||||||||||||| ||||||| | || || |||||||||||||| |||||| |||||    
T  49218889 attctcccctcgtcgagcgttggacgtttataccaaaggtgttccaccctccttgtgtctctagggtt 49218956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 223 - 439
Target Start/End: Complemental strand, 51015496 - 51015277
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| || |||| |||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  51015496 taatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtttcccgcatatcgatccactggaacatgttgtgctccc 51015397  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||    
T  51015396 aaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatacactcccctcgtcgagcgttggacgtttataccgaacgtgttccac 51015297  T
Q  420 cctccttgcgtctctggggt 439  Q
    |||||||| |||| ||||||    
T  51015296 cctccttgtgtctttggggt 51015277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 223 - 437
Target Start/End: Original strand, 45100465 - 45100682
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    |||||||||| || ||||||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  45100465 taatgacgatattatggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctccc 45100564  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||| ||||||    
T  45100565 aaaacatgctcgtcacatttttgtcgttctttaactccacccaagtgaatgatactctcccttcgtcgagcgttggacgtttataccgaacgtgttccac 45100664  T
Q  420 cctccttgcgtctctggg 437  Q
    |||||||| |||| ||||    
T  45100665 cctccttgtgtctatggg 45100682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 30192830 - 30192537
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||| |||| |||| || ||| |||| |||||||||||||||||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  30192830 gtttggcaagtttgaaatacctcatt-caaagg-aagaaaattgttgtagttggaaggtgcattcattccgtacctaatgacgatcttctggcggaatca 30192733  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||||||||||||||||  | ||||||| ||| ||||||||||||||| | ||||||||||||    
T  30192732 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactagaacatgatgtactcccaaaacatgctagacacgttttcgtc 30192633  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  30192632 gttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 30192537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 43570202 - 43569909
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgca-tcttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||||||||||||||||||| |||| || ||| |||||||||||||||| |||||  |||| || | || ||  ||| ||||||||| ||||| |||||    
T  43570202 gtttggcaagtttgaattacctcatt-caaagg-aagacaattgttgtagctggaaggtgcagtcattccgtacataaagacgatcttctggcgaaatca 43570105  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || | || ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  43570104 aacttttgatgatatcttcaattgatctcagcaacgttacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttcgtc 43570005  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||  ||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||  ||||||||||||    
T  43570004 gttcgttagttccacccaagtaaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttctgtctctggggtt 43569909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 151 - 427
Target Start/End: Complemental strand, 41578198 - 41577918
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||||||||||||||||||| |||| || ||| |||||||||||||||| || ||  ||||| | | || ||  |||||| |||||| |||||||||||    
T  41578198 gtttggcaagtttgaattaccacatt-caaagg-aagacaattgttgtagctgaaaggtgcattcattccgtacctaatgatgatcttctggcggaatca 41578101  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| || ||||||| |||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  41578100 aacttttgatgatatcttcagttgatctcagcaacgtcactcgcatattgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttcgtc 41578001  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttg 427  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  41578000 gttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctccttg 41577918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 157 - 440
Target Start/End: Complemental strand, 6754488 - 6754203
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttga 256  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||| |    || |||||  |||| |||||||| | || |||||| | ||||||    
T  6754488 caagtttgaattaccccatttcagag-taagacagttgttgtagttggaaggtgcatttccctacataatcacgatcttctagcagaatcagactgttga 6754390  T
Q  257 tgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaa 354  Q
    | |||| || |||| |||||||||||||||||||||||||||||  || ||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  6754389 taatatcttcagttgatctcagcaacgttacccgcatatcgatcaactagaacatgttgtactcccaaaacatgatcgtcacgttttcgtcgttcgttaa 6754290  T
Q  355 ctccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||||| | ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| ||| ||||| ||||||    
T  6754289 ttccacccaacttaatgatattctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctctttgtgtctccggggtt 6754203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 151 - 432
Target Start/End: Original strand, 34472003 - 34472288
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca---tcttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| ||||||||| |||||| ||||| | |   || | |  ||  ||||||||||||| ||||||||| |    
T  34472003 gtttggcaagtttgaattaccccatt-caaagg-aagacaatttttgtagctggaaggaacattcattcggtacctaatgacgatcttctggcggaataa 34472100  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  34472101 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 34472200  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtct 432  Q
    |||| |||| ||||||||||||||||||||||||||||||| |||||||||| ||||||| |||| || |||||||||||||| ||||    
T  34472201 gttcgttaattccacccaagtgaatgatactctcccctcgtagagcgttggacgtttataccgaatgtgttccaccctccttgtgtct 34472288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 34647267 - 34647487
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| | ||| ||||||| | |||||||||| || |||| ||||||||||||| ||||||||||| ||||  |||||||||||||||||||    
T  34647267 taatgacgatcttctagcgtaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatccactggaacatgttgtgctccc 34647366  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccac 419  Q
     |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  34647367 gaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttatactgaacgtgttccac 34647466  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||| ||||||    
T  34647467 cctccttgtgtctcgggggtt 34647487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 147 - 375
Target Start/End: Complemental strand, 50997681 - 50997453
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| ||||||||||||||||||||  | ||  || ||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  50997681 tgttgtttgacaagtttgaattaccccattcaaaag--aatacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttctggcggaatc 50997584  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| |||||| | |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  50997583 aaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatcaactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 50997484  T
Q  345 cgttctttaactccacccaagtgaatgatac 375  Q
    ||||| |||| ||||| ||||||||||||||    
T  50997483 cgttcgttaattccactcaagtgaatgatac 50997453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 223 - 437
Target Start/End: Original strand, 55206884 - 55207101
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  55206884 taatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctccc 55206983  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||| || |||    
T  55206984 aaaacatgctcgtcacattttcgtcgttcgttaattccacccaagtgaatgatactctcacctcgtcgagcattggacgtttataccgaacgtgtttcac 55207083  T
Q  420 cctccttgcgtctctggg 437  Q
    |||||||  |||||||||    
T  55207084 cctccttctgtctctggg 55207101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 41804194 - 41803901
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |  ||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  41804194 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctaaaaagtgcattcattccgtacctaatgacgatcttctggcggaatca 41804097  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | ||||| |||| || | || |||||| |||||| || | |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  41804096 aacttttgattatatcttcatttgatctcatcaacgtcactctcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 41803997  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| |||||||||||||  ||||||||||||    
T  41803996 gttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttgaacgtttataccgaacgtgttccaccctccttttgtctctggggtt 41803901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 47759891 - 47760111
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| ||||||| ||||||||||||| ||||| | ||||||||  ||||||||| |||| ||||    
T  47759891 taatgacgatcttctggcggaatcaaacttttgatgatatctttagttgatctcagcaacgtcacccgtacatcgatccactggaacatgctgtgttccc 47759990  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccac 419  Q
    |||||||| | |||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  47759991 aaaacatgtttgtcacgttttcgtcgttcgttaattccacccaggtgaatgatactctcccctcgtcgagcgttggacgtttatacggaacgtgttccac 47760090  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  47760091 cctccttgtgtctctggggtt 47760111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 157 - 440
Target Start/End: Original strand, 6464280 - 6464565
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttga 256  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||||||| |    || |||||  |||| |||||||| | || |||||| | ||||||    
T  6464280 caagtttgaattaccccatttcagag-taagagagttgttgtagttggaaggtgcatttccctatataatcacgatcttcttgcagaatcagactgttga 6464378  T
Q  257 tgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaa 354  Q
    | |||| || |||| |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||| ||||    
T  6464379 taatatcttcagttgatctcagcaacgttacccacatatcgatccactggaacatgttgtgctcccaaaacatgattgtcacgttttcgtcgttcattaa 6464478  T
Q  355 ctccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||||| ||||||||| |||||||||||||||||||||| ||||||| | |||||||||||||||| ||| ||| | ||||||    
T  6464479 ttccacccaactgaatgatattctcccctcgtcgagcgttggacgtttataccaaacgtattccaccctctttgtgtcaccggggtt 6464565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 223 - 440
Target Start/End: Complemental strand, 2428706 - 2428486
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| | ||||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||  | ||| |||||||||||||    
T  2428706 taatgacgatcttctagcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactagaaaatgttgtgctccc 2428607  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||| |||||||||||||||||||| |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||| ||||||| ||||||    
T  2428606 aaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattatcccctcgtcgagcgttggacgtttataccgaacgtgttccac 2428507  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||  ||||||||||||    
T  2428506 cctccttctgtctctggggtt 2428486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 223 - 440
Target Start/End: Complemental strand, 14631664 - 14631444
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| |||| |||||||| | |||||||||| ||||||| |||||| |||||| ||||||||||| ||||  ||||||||||| |||||||    
T  14631664 taatgacgatcttctggcagaatcaaacttttgatgatatctttagttgatctcaacaacgtcacccgcatatcaatccactggaacatgttttgctccc 14631565  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||   |||||||||||||||| ||||||| ||||||| ||||||    
T  14631564 aaaacatgctcgtcacgttttcgttgttcgttaattccacccaagtgaatgatactctttactcgtcgagcgttggacgtttataccgaacgtgttccac 14631465  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||| ||||    
T  14631464 cctccttgtgtctctgaggtt 14631444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 223 - 440
Target Start/End: Complemental strand, 37281671 - 37281451
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||| ||| | |||||||||| ||  ||| ||||||||||||| ||||||||||||||||  || ||||||||||||||||    
T  37281671 taatgacgatcttctggcggaattaaacttttgatgatatcttccgttgatctcagcaacgtcacccgcatatcgatccactgaaacatgttgtgctccc 37281572  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| |||||| ||||||| ||||||| |||||     
T  37281571 aaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgataccctaccctcgtcgagtgttggacgtttataccgaacgtgttccat 37281472  T
Q  420 cctccttgcgtctctggggtt 440  Q
    | |||||| |||| |||||||    
T  37281471 catccttgtgtctatggggtt 37281451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 223 - 434
Target Start/End: Original strand, 10053275 - 10053485
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | ||||||||||||  |||| ||||||||||||| ||||||||||||||||  ||||||||||   ||||||    
T  10053275 taatgacgatcttctggcggaatcaaacttttgatgatatttc-agttgatctcagcaacgtcacccgcatatcgatccactggaacatgt---gctccc 10053370  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||  |||||| |||| |||||||||    
T  10053371 aaaacatgctcatcacgttttcgtcgttcgttaattccacccaattgaatgatactctcccctcgtcgagcgttggacatttataccgaatgtattccac 10053470  T
Q  420 cctccttgcgtctct 434  Q
    |||||||| ||||||    
T  10053471 cctccttgtgtctct 10053485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 223 - 440
Target Start/End: Complemental strand, 27187167 - 27186947
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    |||| ||||| || ||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  27187167 taatcacgatattatggcggaatcagattgttgataatatctttagttgatctcagcaacgttacccgcatatcgatccaatggaacatgttgtgctccc 27187068  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccac 419  Q
    |||||||| |||||| ||||||||||||| |||| ||||||||| | ||||||| |||||||||  ||||| |||||  |||||||  ||||||||||||    
T  27187067 aaaacatgttcgtcatgttttcgtcgttcgttaattccacccaactaaatgatattctcccctctacgagcattggacatttatactaaacgtattccac 27186968  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  27186967 cctccttgtgtctctggggtt 27186947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 223 - 440
Target Start/End: Complemental strand, 49273618 - 49273398
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctccc 320  Q
    |||||||||| || |||  |||||||| | |||||||||| || |||| ||||||||||||| |||| ||||| ||||  ||||||||||||||||||||    
T  49273618 taatgacgatattctggaagaatcaaacttttgatgatatattcagttgatctcagcaacgtcacccacatattgatcaactggaacatgttgtgctccc 49273519  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    | ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||| || ||||||    
T  49273518 agaacatgctcgtcacgttttcgtcgttcattaattccacccaagtgaatgatactctgccctcgtcgagcgttggacgtttataccgaatgtgttccac 49273419  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| |||||| |||||    
T  49273418 cctccttgtgtctctagggtt 49273398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 223 - 438
Target Start/End: Original strand, 52569409 - 52569626
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcct--ggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| || |||| |||||||||| || |||||||||||||| |   ||||||||||||||||||    
T  52569409 taatgacgatcttctggcggaatcaaactcttgatgatatcttcagttgatctcagcaatgtcacccgcatatcgattcaccggaacatgttgtgctccc 52569508  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||||||||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| |||| || ||||||    
T  52569509 aaaacatgctcgtcac-ttttcgtcgttcgttaattccacccaagcgaatgatactctcccctcgtcgagcgttggacgtttataccgaatgtgttccac 52569607  T
Q  420 cctccttgcgtctctgggg 438  Q
    | |||||  ||||||||||    
T  52569608 catccttttgtctctgggg 52569626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 7954496 - 7954202
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||||||||||||||||||| |||| || ||| |||||||||||||||||| |||  ||||| | | || ||  ||||||||||||| | |||||||||    
T  7954496 gtttggcaagtttgaattacctcatt-caaagg-aagacaattgttgtagttagaaggtgcattcattccgtacctaatgacgatcttctagcggaatca 7954399  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
     ||||||||| |||| || |||| |||| |||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||    
T  7954398 gattgttgataatatcttcagttgatcttagcaactttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacattttcgtc 7954299  T
Q  346 gttctttaactccacccaagtgaatgatactct-cccctcgtcgagcgttggatgtttat-acgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||  |||| ||||||||| | |||||||| || |||||| ||||| |||||| ||||||  |||||||||||||||||||||| ||||| ||||||    
T  7954298 gtttgttaattccacccaactaaatgataccctccccctcatcgagtgttggacgtttatgccgaacgtattccaccctccttgtgtctccggggtt 7954202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 152 - 406
Target Start/End: Complemental strand, 7246385 - 7246128
Alignment:
Q  152 tttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatct-taccctaattaatgacgatcttttggcggaatcaa 248  Q
    ||||||||||||||||||||||||| || ||| |||||||| ||||||| |||||  ||||| | | || ||  ||||||||||||| ||||||||||||    
T  7246385 tttggcaagtttgaattaccccatt-caaagg-aagacaatcgttgtagctggaaggtgcatttattccatacctaatgacgatcttctggcggaatcaa 7246288  T
Q  249 attgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcg 346  Q
    | | |||||||||| || |||| |||| |||||||| |||||||||||||| |  ||||||||||| |  ||||||||||||||||||||||||||||||    
T  7246287 acttttgatgatatcttcagttgatctaagcaacgtcacccgcatatcgatacactggaacatgttataatcccaaaacatgctcgtcacgttttcgtcg 7246188  T
Q  347 ttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac 406  Q
    ||| |||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  7246187 ttcgttaattccacccaagtcaatgatattctcccctcgtcgagcgttggacgtttatac 7246128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 151 - 433
Target Start/End: Original strand, 8633292 - 8633572
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    ||||| ||||||||||||||| |||| || ||| ||||||||||||||||||||  |||||    |  ||  ||||||||||||| ||||||||||| |     
T  8633292 gtttgacaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggggtgcatt---cggtacctaatgacgatcttctggcggaatcagac 8633386  T
Q  251 tgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 348  Q
    ||||||| |||| || || | ||| || |||||||||||||||||||||||  ||||||| |||||  |||||||| ||  |||||||||||||||||||    
T  8633387 tgttgataatatcttcagatgatcgcaacaacgttacccgcatatcgatccactggaacacgttgtcatcccaaaaaatattcgtcacgttttcgtcgtt 8633486  T
Q  349 ctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctc 433  Q
    | |||| ||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  8633487 cgttaattccacccaactgaatgatactctcccctcgtcgagcgttggatgtttataccaaacgtattccaccctccttgtgtctc 8633572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 224 - 440
Target Start/End: Original strand, 36721390 - 36721609
Alignment:
Q  224 aatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccca 321  Q
    |||||||||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| ||| ||||||||||||  | ||||||||||||||||||    
T  36721390 aatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcaccagcatatcgatccactagaacatgttgtgctccca 36721489  T
Q  322 aaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccacc 420  Q
    ||   ||||||||||||||||||||||| || | ||||  ||||||||||||||||||| ||||||||||||||||  |||||| ||||||| |||||||    
T  36721490 aacattgctcgtcacgttttcgtcgttcgtttattccaatcaagtgaatgatactctcctctcgtcgagcgttggacatttataccgaacgtgttccacc 36721589  T
Q  421 ctccttgcgtctctggggtt 440  Q
    ||||||| |||| |||||||    
T  36721590 ctccttgtgtctttggggtt 36721609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 151 - 400
Target Start/End: Original strand, 42323316 - 42323568
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||||||| |||||  ||||| | | |  ||  |||||||||||||   | |||||||    
T  42323316 gtttgccaagtttgaattaccccatt-cagagg-aagacaattgttgtagctggaaggtgcattcattcagtacctaatgacgatcttccagtggaatca 42323413  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||| ||||||||||||  || ||||| ||| |||||||||||||||||||||||||||||||    
T  42323414 aacttttgatgatatcttcagttgatctcagcaacgtcaccagcatatcgatccactgaaacattttgagctcccaaaacatgctcgtcacgttttcgtc 42323513  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgt 400  Q
    |||| |||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  42323514 gttcgttaattccacccaagtgaatgatactctcccctcgtcaagcgttggatgt 42323568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 50458691 - 50458911
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    |||||||||||||  |||||||||||| | |||||||||| || |||| |||||| |||||| ||||||||||| ||||  |||||||||||||||||||    
T  50458691 taatgacgatcttcaggcggaatcaaacttttgatgatatcttcagtttatctcaacaacgtcacccgcatatctatccactggaacatgttgtgctccc 50458790  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||||||| ||||||||||||| |  | ||||||||| | || |||||||||||||||||||||||||||   ||||| ||| ||| | ||||    
T  50458791 aaaacatgctcgtcaagttttcgtcgttcgtagattccacccaattaaacgatactctcccctcgtcgagcgttggacacttatatcgaccgtgtcccac 50458890  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  50458891 cctccttgtgtctctggggtt 50458911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 156 - 405
Target Start/End: Original strand, 774274 - 774522
Alignment:
Q  156 gcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgt 253  Q
    ||||||||||||| ||  |||||||||||||||||||||||| ||||||||  |||||    |||||  |||| |||||||| ||| ||||||| | | |    
T  774274 gcaagtttgaatttcc--atttcagaggtaagacaattgttgcagttggaaggtgcatt---ccctacctaatcacgatcttctggtggaatcagactct 774368  T
Q  254 tgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctt 351  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||||  |||||||||  ||||||| |||||||| || |||||||||| |||||| |    
T  774369 tgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgcagtgctccgaaaacatgttcttcacgttttcatcgttcgt 774468  T
Q  352 taactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||| |||| |||| ||||||||| |||||| ||||||||||||||| |||||||    
T  774469 taattccatccaactgaatgatattctcccgtcgtcgagcgttggacgtttata 774522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 33449082 - 33449359
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaa 248  Q
    ||||| |||||||||||||||||||  |||||| || |||||||||||||||||||  |||||    |||||  |||| |||||||| ||||||||||||    
T  33449082 gtttgacaagtttgaattaccccatc-cagaggaaa-acaattgttgtagttggaaggtgcatt---ccctacctaattacgatcttctggcggaatcaa 33449176  T
Q  249 attgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcg 346  Q
    | | | |||||||| || |||| |||||||||            |||||||||  ||||||||| ||||||||||||||||| || ||||||||||||||    
T  33449177 actttggatgatatcttcagttgatctcagca------------tatcgatccactggaacatgatgtgctcccaaaacatgttcttcacgttttcgtcg 33449264  T
Q  347 ttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||| ||||||||||| |||| |||||||    
T  33449265 ttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgtttgacgtttatatcgaacgtatttcaccctccttgtgtctttggggtt 33449359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 157 - 427
Target Start/End: Original strand, 20375818 - 20376089
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgtt 254  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||||||||  |||||    |||||  |||| ||||| ||||||||||||||||  |||    
T  20375818 caagtttgaattaacccatttcagag-taagacaatttttgtagttggaaggtgcatt---ccctacctaatcacgatattttggcggaatcaaacagtt 20375913  T
Q  255 gatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcttt 352  Q
    | |  ||| || | || |||||||||||||||| ||||||||||||  || ||||||||||||||| |||||||| ||| ||||||| ||||||||||||    
T  20375914 gttattatcttaaattgatctcagcaacgttacacgcatatcgatctacttgaacatgttgtgctctcaaaacatactcctcacgttatcgtcgttcttt 20376013  T
Q  353 aactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttg 427  Q
    || ||||||||| ||||||||| |||||| ||||||||| || || ||||||| ||||| ||||||| | ||||||    
T  20376014 aattccacccaactgaatgatattctcccatcgtcgagcattagacgtttataccgaacatattccatcttccttg 20376089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 151 - 341
Target Start/End: Original strand, 46346539 - 46346732
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||| ||| || ||| |||||||||||||||| |||||  ||||| | | || ||  ||||||| ||||| |||||||||||    
T  46346539 gtttggcaagtttgaattacccaatt-caaagg-aagacaattgttgtagctggaaggtgcattcattccgtacataatgacaatcttctggcggaatca 46346636  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgtttt 341  Q
    || | |||||||||| || |||| ||||||||||||| |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  46346637 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccagaacatgctcgtcacgtttt 46346732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 223 - 440
Target Start/End: Complemental strand, 14265624 - 14265407
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcctgg--aacatgttgtgctccc 320  Q
    |||| ||||||||  |||||||||||| | | ||  |||| ||||||||||||||| |||||||| | || ||||||||  |  ||||||||||| ||||    
T  14265624 taatcacgatcttcaggcggaatcaaactctggagaatatctttagttaatctcagtaacgttacacacaaatcgatccacggtaacatgttgtggtccc 14265525  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||| |||||||||   |||||||| |||| | || |||| ||||||||| || ||| ||||||| ||||||||||||||| ||||||||||||||    
T  14265524 aaaacatgttcgtcacgt---cgtcgttccttaatttcatccaactgaatgatattcacccatcgtcgaacgttggatgtttataccgaacgtattccac 14265428  T
Q  420 cctccttgcgtctctggggtt 440  Q
    | |||||| ||||||||||||    
T  14265427 cttccttgtgtctctggggtt 14265407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 156 - 406
Target Start/End: Original strand, 25887542 - 25887795
Alignment:
Q  156 gcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat--cttaccctaattaatgacgatcttttggcggaatcaaatt 251  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||  |||||  | |||| |||| ||| ||||| || | ||||||||||| |    
T  25887542 gcaagtttgaattatcccatttcataggtaagacaattgttgtagttggaaggtgcattccctacc-taat-aatcacgatattctagcggaatcaaact 25887639  T
Q  252 gttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcctgga--acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttc 349  Q
    || ||  |||| || |||| |||||| ||||||| | | ||||| |||||  ||  ||||||||||||||||||||||| || |||| |  ||||||||     
T  25887640 gtggagaatatcttcagttgatctcaacaacgttccacacatat-gatccacgagaacatgttgtgctcccaaaacatggtcctcacatcctcgtcgttt 25887738  T
Q  350 tttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac 406  Q
     |||| ||||||||| ||| ||||| |||||| ||||||| ||||||| ||||||||    
T  25887739 gttaattccacccaactgagtgatattctcccatcgtcgaacgttggacgtttatac 25887795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 126 - 195
Target Start/End: Original strand, 11378840 - 11378909
Alignment:
Q  126 tgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgt 195  Q
    |||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||||||    
T  11378840 tgggcgaaatgcttgagtcatggtcgtttgacaagtttgaattaccccatttcagaggtaagacaattgt 11378909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 15637118 - 15637023
Alignment:
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| ||||||||| ||||||||| |||||| |||||||| |||||| |||||||| ||||||||||||||||||||| |||| |||||||    
T  15637118 gttcattaattccacccaactgaatgatattctcccatcgtcgagtgttggacgtttataccgaacgtattccaccctccttgtgtctatggggtt 15637023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 312
Target Start/End: Complemental strand, 18441028 - 18440873
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgtt 254  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||  |||||  |   |||  |||| |||||||| ||| ||||||||| ||||    
T  18441028 caagcttgaattacccaatttcagag-taagacaattgttgtagttggaaggtgcattct---ctacctaatcacgatcttctggtggaatcaaactgtt 18440933  T
Q  255 gatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgtt 312  Q
    ||| |||| || |||| |||||||||||||||| | ||||||||||  ||||||||||||    
T  18440932 gataatatcttcagttgatctcagcaacgttacacacatatcgatccactggaacatgtt 18440873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 312
Target Start/End: Complemental strand, 19486102 - 19485947
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgtt 254  Q
    |||| ||||||||||| ||||||||| |||||||||||||||||||||||  |||||  |   |||  |||| |||||||| ||| ||||||||| ||||    
T  19486102 caagcttgaattacccaatttcagag-taagacaattgttgtagttggaaggtgcattct---ctacctaatcacgatcttctggtggaatcaaactgtt 19486007  T
Q  255 gatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgtt 312  Q
    ||| |||| || |||| |||||||||||||||| | ||||||||||  ||||||||||||    
T  19486006 gataatatcttcagttgatctcagcaacgttacacacatatcgatccactggaacatgtt 19485947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 25576350 - 25576249
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||||   ||||||||||||||| || | |||||||||| |||||||||| |||||||| || ||||||||||||||||||||||||||    
T  25576350 aaggaaaaacatgaacacggggcgaaatgcttgagtcct-gttgtttggccagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaa 25576253  T
Q  207 tgca 210  Q
    ||||    
T  25576252 tgca 25576249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 24702026 - 24701930
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| |  ||| ||||||||||| |||  ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  24702026 aaaacatgaatgccgggtgaaatgcttgagtcag-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatgca 24701930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 13895591 - 13895528
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  13895591 tgttgtttggcaagtttgaattgaccccatt-caaaggtaagacaattgttgtagttggaatgca 13895528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 37281913 - 37282010
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  ||||||||||||||| || | |||||||||| |||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  37281913 aaggaaaaacatgaatgccgggcgaaatgcttgagtcct-gttgtttggccagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 37282010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 44835241 - 44835145
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| |  |||||||||| |||| || | ||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  44835241 aaaacatgaatgccgggcgaaatgtttgagtcct-gttgtttggtaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatgca 44835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 42383516 - 42383612
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| |  ||| ||||||||||| || | |||||||||||||||||||||   ||| |||| || |||||||||||||||||||||||||||    
T  42383516 aaaacatgaatgccgggtgaaatgcttgagtcct-gttgtttggcaagtttgaatttatccaattcaaagataagacaattgttgtagttggaatgca 42383612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 34693011 - 34692948
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||    
T  34693011 tgttgtttggcaagtttgaattgaccccatt-cacaggtaagacaattgttggagttggaatgca 34692948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 44927961 - 44928024
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||| |||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  44927961 tgttgcttggcaagtttgaattgacccca-ttcaaaggtaagacaattgttgtagttggaatgca 44928024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 11378736 - 11378635
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |   ||| |||||||||| || | ||||||||||||||||||||| |||||||| || ||| ||||||||||||| ||||||||    
T  11378736 aaggaaaaacatgaatgcgaggcaaaatgcttgagtcct-gttgtttggcaagtttgaatttaccccatt-caaaggcaagacaattgttggagttggaa 11378639  T
Q  207 tgca 210  Q
    ||||    
T  11378638 tgca 11378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 19452868 - 19452811
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  19452868 tgttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttgg 19452811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 20375610 - 20375556
Alignment:
Q  150 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttg 203  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  20375610 tgtttagcaagtttgaatttaccccatttcagaggtaagacaattattgtagttg 20375556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 6464057 - 6464012
Alignment:
Q  158 aagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 202  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  6464057 aagtttgaatttaccccatttcagaggtaagacaattgttgtagtt 6464012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 39416701 - 39416605
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| |  ||| |||||| |||| |||| ||||||||| |||||||||||  |||  |||| |||||||| |||||||||||||||||||||    
T  39416701 aaaacatgaatgcggggtgaaatgtttgagtcat-gttgtttgggaagtttgaatttgccccattcaaaggtaagataattgttgtagttggaatgca 39416605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 3494790 - 3494688
Alignment:
Q  108 aaggaaaaacatgaac-gttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgga 205  Q
    |||||||||||||||  | | |||||||||||||| |||| ||||||| ||||||||||||| | |||||| || |||||| ||||||||||| ||||||    
T  3494790 aaggaaaaacatgaagtgctcggcgaaatgcttgagtcat-gttgttttgcaagtttgaatttatcccatt-caaaggtaacacaattgttgttgttgga 3494693  T
Q  206 atgca 210  Q
    |||||    
T  3494692 atgca 3494688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 15637273 - 15637226
Alignment:
Q  158 aagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||    
T  15637273 aagtttgaattacctcatttcagag-taagacaattgttgtagttggaa 15637226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 25887334 - 25887273
Alignment:
Q  146 ttgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||| |||| ||||||||||||| ||| ||||||| |||||||| |||||||||||||||||    
T  25887334 ttgtcgtttagcaagtttgaatttacctcatttcaaaggtaagataattgttgtagttggaa 25887273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 34646988 - 34646929
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||| |||||||||||| |||||||| || |||||| |||||||||||||||||||    
T  34646988 tgttgtttgacaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttggaa 34646929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 36721143 - 36721053
Alignment:
Q  112 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttg 203  Q
    ||||||||||| || ||||||||||||||| || | |||||||||  || ||||||| ||| |||| || |||||||||||||||||||||||    
T  36721143 aaaaacatgaatgtcgggcgaaatgcttgagtcct-gttgtttgggcagattgaatttacctcatt-caaaggtaagacaattgttgtagttg 36721053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 7246601 - 7246651
Alignment:
Q  156 gcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  7246601 gcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 7246651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 18441249 - 18441299
Alignment:
Q  156 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  18441249 gcaagtttgaatttatcccatttcagaggtaa-acaattgttgtagttggaa 18441299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 19486323 - 19486373
Alignment:
Q  156 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||||||||    
T  19486323 gcaagtttgaatttatcccatttcagaggtaa-acaattgttgtagttggaa 19486373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 27187820 - 27187870
Alignment:
Q  156 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||||||||    
T  27187820 gcaagtttgaatttacctcatt-cagaggtaagacaattgttgtagttggaa 27187870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 50997867 - 50997948
Alignment:
Q  128 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || ||||||||||||||||| ||||||||||||    
T  50997867 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaagacaattgttggagttggaatgca 50997948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 8633080 - 8633027
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||| |||||||| || |||||| |||||||||||||||||||    
T  8633080 ttggcaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttggaa 8633027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 41578409 - 41578462
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||| ||| |||| || ||||||||||||||||||||||||||    
T  41578409 ttggcaagtttgaatttacctcatt-caaaggtaagacaattgttgtagttggaa 41578462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 47066213 - 47066247
Alignment:
Q  176 ttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||| ||||||||||||||||||||||||||||||    
T  47066213 ttcaaaggtaagacaattgttgtagttggaatgca 47066247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 49273907 - 49273960
Alignment:
Q  153 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  49273907 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 49273960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 6754703 - 6754756
Alignment:
Q  150 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 202  Q
    ||||| ||||| ||||||| ||| |||||| |||||||||||||||||||||||    
T  6754703 tgtttagcaagattgaatttaccacatttcggaggtaagacaattgttgtagtt 6754756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 433
Target Start/End: Original strand, 11378908 - 11378957
Alignment:
Q  385 gtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctc 433  Q
    ||||||||||||| |||||||| |||||| |||||||||||||| |||||    
T  11378908 gtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctc 11378957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 46346745 - 46346794
Alignment:
Q  386 tcgagcgttggatgtttatacg-aacgtattccaccctccttgcgtctct 434  Q
    |||||||||||| ||||||||| ||||| |||||||||||||| ||||||    
T  46346745 tcgagcgttggacgtttatacggaacgtgttccaccctccttgtgtctct 46346794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 52569336 - 52569383
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 200  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  52569336 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 52569383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 2268216 - 2268153
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||| ||| ||||||||| | |||||| || ||||||||||||||| ||||||||||||||    
T  2268216 tgttgttttgcaggtttgaatttatcccatt-caaaggtaagacaattgtcgtagttggaatgca 2268153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 4003848 - 4003746
Alignment:
Q  108 aaggaaaaacatgaac-gttgggcgaaatgcttgaatcattgttgtttggcaagtttgaat-taccccatttcagaggtaagacaattgttgtagttgga 205  Q
    |||| ||||||||||  ||| |||||||||||||| |||| |||||||| || |||||||| || | |||| || |||||| |||||||||| |||||||    
T  4003848 aagggaaaacatgaagtgtttggcgaaatgcttgagtcat-gttgtttgacaggtttgaatctatctcatt-caaaggtaacacaattgttggagttgga 4003751  T
Q  206 atgca 210  Q
    |||||    
T  4003750 atgca 4003746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 42322995 - 42323041
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 205  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  42322995 caagtttgaattaccccattt-agagg-aagacaattgttgcagttgga 42323041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 440
Target Start/End: Original strand, 42328288 - 42328336
Alignment:
Q  393 ttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||||||| |||||| |||||||||||||| ||||||||||||    
T  42328288 ttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 42328336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 46346217 - 46346263
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 205  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  46346217 caagtttgaattacccca-ttcagagg-aagacaattgttgcagttgga 46346263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 49139815 - 49139713
Alignment:
Q  108 aaggaaaaacatgaac-gttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgga 205  Q
    |||| ||||||||||  ||| |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| ||||||||||| ||||||    
T  49139815 aagggaaaacatgaagtgtttggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtggttgga 49139718  T
Q  206 atgca 210  Q
    |||||    
T  49139717 atgca 49139713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 52569124 - 52569073
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||||||||| ||| |||| || ||||||||||||||||||||||||    
T  52569124 ttggcaagtttgaatttacctcatt-cacaggtaagacaattgttgtagttgg 52569073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 12968184 - 12968519
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| |||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  12968184 aaggaaaaacatgaacgctgggcgaaatgcttgagtcatggtcgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggagt 12968283  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgga 305  Q
    ||| |||||||||| ||||||||||||| ||| |||||||| ||||||||||||| || |||| ||||||||||||||||||||||||||||||  ||||    
T  12968284 gcaccttaccctaactaatgacgatcttctggaggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccaatgga 12968383  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  12968384 acatgttgtgctcccaaaacatgctcgtaacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcattggacgtttata 12968483  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||||||||||||||||||||| ||||||||||||    
T  12968484 ccgaacgtattccaccctccttgtgtctctggggtt 12968519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 22493595 - 22493260
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| |||||||||||| ||| |||| |  ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  22493595 aaggaaaaacatgaacgctgggcgaaatgcctgagtcatggccgtttggcaagtttgaattaccccatttcagaagtaagacagttgttgtagttggaat 22493496  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||| ||||||| ||||||||||||||||| |||  |||||    
T  22493495 gcatcttaccctaactaatgacgatcttctggcggaatcaagttgttgatgatatctttagttgatctcaggaacgttacccgcatatcaatccactgga 22493396  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||  ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22493395 acattctgtactcccaaaacatgctcgtcacgttttcgccgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttata 22493296  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||||||||||||||||||||||||||||||||||    
T  22493295 ccgaacgtattccaccctccttgcgtctctggggtt 22493260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 29906906 - 29906571
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| |||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29906906 aaggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacagttgttgtagttggaat 29906807  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| |||||  |||||| |||| ||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||  |||||    
T  29906806 gcaccttaccctaactaatgctgatcttctggcagaatcaagttgttgatgatattttcagttgatctcagcaacgttacccgcatatcgatccactgga 29906707  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||    
T  29906706 acatgttgtgctcccaaaacatgtttgtcacgttttcgtcgttctttaacttcacccaagtgaatgatactctccccacgtcgagcgttggacgtttata 29906607  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||||||||||||||||||| |||||||||||    
T  29906606 ccgaacgtattccaccctccttgcatctctggggtt 29906571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 112 - 440
Target Start/End: Complemental strand, 42120332 - 42120001
Alignment:
Q  112 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 211  Q
    ||||||||||||| |||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  42120332 aaaaacatgaacgctgggcgaaatgcttgattcatggtcgtttgacaagtttgaattaccccatttcagaggtaagacaatcgttgtagttggaatgcac 42120233  T
Q  212 cttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacat 309  Q
    |||||||||| ||||||||||||| ||||||||||||  |||||||||||| || |||| |||||||||||||||||| |||||| |||  |||||||||    
T  42120232 cttaccctaactaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccacatatcaatccactggaacat 42120133  T
Q  310 gttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cga 408  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||| |||    
T  42120132 gttgtgctcccaaaacatgctcgtcacattttcgtcgttctttaactccgcccaagtgaatgatactctcccctcgtcgagcgttggacatttataccga 42120033  T
Q  409 acgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||||||||||||| |||||||||||    
T  42120032 acgtattccaccctccttgcatctctggggtt 42120001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 10360082 - 10360416
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    |||||||||||||||||||||||||||||||||| |||| |  |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  10360082 aaggaaaaacatgaacgttgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttt-gaggtaagacaattgttgtagttggaat 10360180  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgga 305  Q
    ||| |||||||||| ||||||||||||| ||||||||||||  ||||||||| || || |||| ||||||||||| ||||||||||||||||||  ||||    
T  10360181 gcaccttaccctaactaatgacgatcttctggcggaatcaagctgttgatgaaatcttcagttgatctcagcaacattacccgcatatcgatccactgga 10360280  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10360281 acatgttgtgctcccaaaacatgctcgtcacgttttcatcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttata 10360380  T
Q  406 c-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||||| |||||||||||||| || || ||||||    
T  10360381 cagaacgtgttccaccctccttgtgtttccggggtt 10360416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 112 - 440
Target Start/End: Original strand, 42240985 - 42241316
Alignment:
Q  112 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 211  Q
    ||||||||||| |  | ||||||||||||| || | |  ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  42240985 aaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttgacaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaatgcac 42241084  T
Q  212 cttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacat 309  Q
    |||||||||| ||||||||||||| |||| |||||||| | ||| |||||| || |||| ||||||||||||| |||||||||||||||  ||| |||||    
T  42241085 cttaccctaactaatgacgatcttatggcagaatcaaacttttggtgatatcttcagttgatctcagcaacgtcacccgcatatcgatcaactgaaacat 42241184  T
Q  310 gttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cga 408  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||    
T  42241185 gttgtgctcccaaaacatgctcgtcacgttttcgttgttctttaattccacccaagtgaatgataccctcccctcgtcgagcgttggacgtttataccga 42241284  T
Q  409 acgtattccaccctccttgcgtctctggggtt 440  Q
    | || || ||||||||||| ||||||||||||    
T  42241285 atgtgtttcaccctccttgtgtctctggggtt 42241316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 32734971 - 32734636
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||| ||||||| |||||||||||  ||||||||||||||||    
T  32734971 aaggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattatcccattttagaggtaagactgttgttgtagttggaat 32734872  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||| ||| ||||||| ||||||||||||||||||  |||||||||||| || |||| || ||| ||||||||||||||||||||||  ||| |    
T  32734871 gcaccttaccttaactaatgactatcttttggcggaatcaagctgttgatgatatcttcagttgatatcaacaacgttacccgcatatcgatccactgta 32734772  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  32734771 acatgttgtgctcccaaaacatgcttgtcacattttcgtagttctttaactccacccaagtgaatgataccctcccctcgtcgagcgttgaacgtttata 32734672  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     | |||||||||||||||||||| ||||||||||||    
T  32734671 ccaaacgtattccaccctccttgtgtctctggggtt 32734636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 16582148 - 16581811
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||| ||||| || | |  ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  16582148 aaggaaaaacatgaatgccgagcgaaatacttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagccaattgttgcagttggaat 16582049  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcata--tcgatcc--tg 303  Q
    ||| |||||||||| |||||| |||||| | ||||||||||  | |||||||||| || |||| ||||||||||||| |||||||||  |||||||  ||    
T  16582048 gcaccttaccctaactaatgaagatcttctagcggaatcaagcttttgatgatatcttcagttgatctcagcaacgtcacccgcatatctcgatccaatg 16581949  T
Q  304 gaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgttta 403  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||| || |||| |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  16581948 gaacatgatgtgctcccaaaacatgctcgacacattttcgtcgctcgttaattccacccaagtgaatgatactctcccctcgtcgagcattggacgttta 16581849  T
Q  404 ta-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    || ||||||| |||||||||||||| ||||||||||||    
T  16581848 taccgaacgtgttccaccctccttgtgtctctggggtt 16581811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 183 - 440
Target Start/End: Complemental strand, 3941986 - 3941726
Alignment:
Q  183 gtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaac 282  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||||||| || |||| |||||| ||||    
T  3941986 gtaagacaattgttgaagttggaatgcaccttaccctaactaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcatcaac 3941887  T
Q  283 gttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcc 380  Q
    || ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||    
T  3941886 gtcacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgaaactctcc 3941787  T
Q  381 cctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||||||| |||||||| ||| || |||||||||||||| ||||||||||||    
T  3941786 cctcgtcgagcgttggacgtttatactgaaggtgttccaccctccttgtgtctctggggtt 3941726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 35491917 - 35491624
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |||||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  35491917 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatcttctggcggaatca 35491820  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  35491819 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 35491720  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  35491719 gttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 35491624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 29111437 - 29111147
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    ||||| ||||||||||||||| |||| || ||| |||| |||||||||||||||||||||  ||||||||  || ||||| | || ||||||||| ||||    
T  29111437 gtttgacaagtttgaattaccacatt-caaagg-aagataattgttgtagttggaatgcactttaccctacctagtgacgttattctggcggaattaaat 29111340  T
Q  251 tgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 348  Q
    | |||||||||| ||  ||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  29111339 ttttgatgatatcttcggttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 29111240  T
Q  349 ctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| |||| |||||||    
T  29111239 cgttaattccacccaactgaatgatactctcccctcgtcgagcgttggacgtttatactgaacgtgttccaccctccttgtgtctttggggtt 29111147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 10364562 - 10364854
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaa 248  Q
    ||||||||||||||||||||||||||| | ||| |||||||||||||||| |||||  |||||     ||||  ||||||||||||| ||||||||||||    
T  10364562 gtttggcaagtttgaattaccccatttaa-agg-aagacaattgttgtagctggaaggtgcattcattcctacgtaatgacgatcttctggcggaatcaa 10364659  T
Q  249 attgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcg 346  Q
    | | |||||||||| || | || ||||||||||| | ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  10364660 acttttgatgatatcttcaattgatctcagcaacatcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcg 10364759  T
Q  347 ttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  10364760 ttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 10364854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 129 - 440
Target Start/End: Original strand, 3936970 - 3937281
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  3936970 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 3937066  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||    
T  3937067 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 3937166  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  3937167 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 3937266  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  3937267 tgtgtctctggggtt 3937281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 129 - 440
Target Start/End: Complemental strand, 43983156 - 43982845
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  43983156 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 43983060  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||    
T  43983059 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 43982960  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  43982959 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 43982860  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  43982859 tgtgtctctggggtt 43982845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 39394215 - 39393880
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaa-tgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgga 205  Q
    ||||||||||||||| | || |||||| ||||||| |||| |||||||| || ||||||||| | | |||| || ||||||||||||||||| |||||||    
T  39394215 aaggaaaaacatgaatgctgagcgaaaatgcttgagtcat-gttgtttgacatgtttgaatttatctcatt-caaaggtaagacaattgttgcagttgga 39394118  T
Q  206 atgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tg 303  Q
    ||||| |||| ||||| ||||||||||||| || ||||||||| ||||| ||||||| || |||| ||||||||||||| ||||||||||||||||  |     
T  39394117 atgcaccttatcctaactaatgacgatcttctgacggaatcaagttgttaatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccacta 39394018  T
Q  304 gaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgttta 403  Q
    |||||||||||||||||||||||||||||||||||||||||||||  || | ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  39394017 gaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtttgttgattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgttta 39393918  T
Q  404 ta-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    || |||| || || ||||||||||| ||||||| ||||    
T  39393917 taccgaaggtgttacaccctccttgtgtctctgaggtt 39393880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 157 - 440
Target Start/End: Complemental strand, 5420742 - 5420458
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttga 256  Q
    |||||||||||| ||||||  ||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||  || ||||||||| | ||||    
T  5420742 caagtttgaattgccccatc-cagag-taagacaattgttgcagttggaatgcaccttaccctaactaatgacgatcttcaggtggaatcaaacttttga 5420645  T
Q  257 tgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaa 354  Q
    |||||| || |||| || |||||||||| ||||||||||||||||  ||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||    
T  5420644 tgatatcttcagttgatatcagcaacgtcacccgcatatcgatccattggaacatgctgtgctcacaaaacatgttcgtcacgttttcgtcgttcgttaa 5420545  T
Q  355 ctccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||| ||||||    
T  5420544 ttccactcaagtgaatgatactctcccctcgtcgagcgttggacgtttatatcgaacgtgttccaccctccttgtgtctccggggtt 5420458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 129 - 440
Target Start/End: Complemental strand, 17425089 - 17424778
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| ||||||| |||||||||||||||||| |||||||||| ||||||    
T  17425089 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aagacaaatgttgtagttggaatgcaccttaccctaactaatga 17424993  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  | |||||||||||||||||||||||    
T  17424992 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactagaacatgttgtgctcccaaaaca 17424893  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  17424892 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 17424793  T
Q  426 tgcgtctctggggtt 440  Q
    || |||||| |||||    
T  17424792 tgtgtctctagggtt 17424778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 151 - 436
Target Start/End: Original strand, 2919289 - 2919578
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||||||||||||||||||| |||| || ||| |||||||||||||||| |||||  ||||| | | || ||  |||||||||||||||||||||||||    
T  2919289 gtttggcaagtttgaattaccacatt-caaagg-aagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatcttttggcggaatca 2919386  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | || ||||||| || |||| ||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  2919387 aacttttaatgatatcttcagttgatctcagcaacgtcacccgcatatcgatctactgtaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 2919486  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctgg 436  Q
    |||| |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| |||||||||||||| ||||||||    
T  2919487 gttcgttaattccacccaagtgaatgatactctcccctcatcgagcgttggacgtttatacagaacgtgttccaccctccttgtgtctctgg 2919578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 147 - 440
Target Start/End: Complemental strand, 29068012 - 29067718
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||||||||    
T  29068012 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaatgcaccttaccctaactaatgacgatcttctggcggaatc 29067915  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| ||||||||||||||||| ||||||| |||||||    
T  29067914 aaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacattttcgt 29067815  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | ||| |||| | ||||||||||||||||| |||||||||||||||||||||| ||||||| | ||||| ||||||| |||||| |||| |||||||    
T  29067814 cattcgttaattgcacccaagtgaatgatattctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctttggggtt 29067718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 152 - 440
Target Start/End: Original strand, 19471559 - 19471851
Alignment:
Q  152 tttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatcaa 248  Q
    |||| |||||||||||||||| ||| |||||| |||||||||||||||| |||||  ||||| | | || ||  ||||||||||||| ||||||||||||    
T  19471559 tttgacaagtttgaattacccaatt-cagagg-aagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatcttctggcggaatcaa 19471656  T
Q  249 attgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcg 346  Q
    | | |||||||||| || |||| |||| |||||||| |||||||||||||| |  ||||||||| |||||||||||||||||||||||||||||||||||    
T  19471657 acttttgatgatatcttcagttgatcttagcaacgtcacccgcatatcgatacactggaacatgctgtgctcccaaaacatgctcgtcacgttttcgtcg 19471756  T
Q  347 ttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  19471757 ttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 19471851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 147 - 440
Target Start/End: Complemental strand, 22002117 - 22001823
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| ||||||||||||||| |||| || ||| |||||||||||||||||||||||||| |||||  ||| ||||||| ||||| ||||||||||    
T  22002117 tgttgtttgacaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatgcaacttacaataactaatgacaatcttctggcggaatc 22002020  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| || |||||||||||||| |||||||||||||||    
T  22002019 aaacttttgatgatatcttaagttgatctaagcaacttcacccgcatatcgatccattggaacatgctgagctcccaaaacatggtcgtcacgttttcgt 22001920  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| ||| ||||||||||||||| |||||||||||||||||||||| ||||||| | ||||| ||| ||| |||||| ||||||||||||    
T  22001919 cgttcgttaattcctcccaagtgaatgatattctcccctcgtcgagcgttggacgtttataccaaacgtgttctaccatccttgtgtctctggggtt 22001823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 151 - 437
Target Start/End: Original strand, 34521608 - 34521898
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |||||  ||||| | | |  ||  ||||||||||||| ||  |||||||    
T  34521608 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatcttatgagggaatca 34521705  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| |||||| |||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  34521706 aacttttgatgatatcttcagttgatctcaacaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 34521805  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggg 437  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||||| || ||||||| ||||||| || ||||||||||| |||||||||    
T  34521806 gttcgttaattccacccaagtgaatgatactctcccctcgttgagcgtttgacgtttataccgaacgtgtttcaccctccttgtgtctctggg 34521898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 37312492 - 37312712
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| |||| |||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  37312492 taatgacgatcttctggcagaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctccc 37312591  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||||||||||||| ||||||| ||||||| |||||     
T  37312592 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaactgaatgataatctcccctcgtcgagcgttggacgtttataccgaacgtgttccat 37312691  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||| ||||||    
T  37312692 cctccttgtgtctcgggggtt 37312712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 41499091 - 41499311
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| |||| |||||||||||  ||||||||| |||||||||    
T  41499091 taatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcaccctcatatcgatccactggaacatgctgtgctccc 41499190  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||||||||||||||||||||| |||| |||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  41499191 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaggttaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 41499290  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||  ||||||||||||    
T  41499291 cctccttctgtctctggggtt 41499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 151 - 436
Target Start/End: Complemental strand, 6977118 - 6976831
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||  ||||| | | |  ||  ||||||||||||| | |||||||||    
T  6977118 gtttggcaagtttgaattaccccatt-cagagg-aagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatcttctcgcggaatca 6977021  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  6977020 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttcgtc 6976921  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctgg 436  Q
    |||| |||| | |||||||||||||||||| ||  ||||||||||||||||| ||||||| ||||| | |||||||||||||| ||||||||    
T  6976920 gttcgttaatttcacccaagtgaatgatacact--cctcgtcgagcgttggacgtttataccgaacatgttccaccctccttgtgtctctgg 6976831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 223 - 433
Target Start/End: Original strand, 27130506 - 27130719
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||| ||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  27130506 taatgactatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctccc 27130605  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| |||||||||| ||||||| |||| || ||||||    
T  27130606 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattctcccctcgttgagcgttggacgtttataccgaatgtgttccac 27130705  T
Q  420 cctccttgcgtctc 433  Q
    |||||||| |||||    
T  27130706 cctccttgtgtctc 27130719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 17796034 - 17796321
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    ||||||||||||||||||||| |||| || ||| ||||||||||||||||||||||  ||  || |||||  ||||||||| ||| || ||||| ||||     
T  17796034 gtttggcaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaagacacatttccctacctaatgacgagcttctgacggaaccaaac 17796131  T
Q  251 tgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 348  Q
    | |||||||||| || |||| |||||||||||||||||||||||||||||  || |||||   |||||||||||||||||||| ||||||||||||||||    
T  17796132 ttttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactagaaca---tgtgctcccaaaacatgctcttcacgttttcgtcgtt 17796228  T
Q  349 ctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||  ||||| ||||||||||| || ||||| ||||||    
T  17796229 cgttaattccacccaactgaatgatactctccactcgtcgagcgttggatgtttatacttaacgtgttccaccctccctgtgtctccggggtt 17796321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 158 - 432
Target Start/End: Complemental strand, 33404286 - 33404012
Alignment:
Q  158 aagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttg 255  Q
    |||||||||||||| |||| || ||| ||||||||||||||||||||||  |||||    |||||  |||| |||||||| |||||  |||| | |||||    
T  33404286 aagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaaggtgcatt---ccctacctaatcacgatcttctggcgacatcagactgttg 33404192  T
Q  256 atgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcttta 353  Q
    || |||| || |||| ||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  33404191 ataatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatcttgtgctcccaaaacatgctcgtcacgttttcgtcgttcgtta 33404092  T
Q  354 actccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtct 432  Q
    | ||||| ||| ||||||||||| | |||||||||||||||||| ||||||| |||||||||||||||||| ||| ||||    
T  33404091 attccacacaactgaatgatactattccctcgtcgagcgttggacgtttataccgaacgtattccaccctctttgtgtct 33404012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 223 - 440
Target Start/End: Complemental strand, 20148327 - 20148107
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctccc 320  Q
    |||| |||||||| ||||||||||| | ||||||  |||| || || |||||||||||||||||||||||||||||||  |||||||||||||||||||     
T  20148327 taatcacgatcttctggcggaatcagactgttgaaaatatcttcagctaatctcagcaacgttacccgcatatcgatctactggaacatgttgtgctcct 20148228  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||||| |||| |||||||||||||||||| ||| ||||| | ||||||| ||||||||||| |||||||||| ||||||| ||||| |||| |||    
T  20148227 aaaacatgctagtcatgttttcgtcgttctttaattccccccaactaaatgatattctcccctcgttgagcgttggacgtttataccgaacatatttcac 20148128  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||| ||||||    
T  20148127 cctccttgtgtctccggggtt 20148107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 230 - 440
Target Start/End: Complemental strand, 6902168 - 6901955
Alignment:
Q  230 gatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacat 327  Q
    |||||| | ||||||||| | ||||||| |||| || |||| |||||| ||||||||| ||||||||||| |  ||||||||||||||||||||||||||    
T  6902168 gatcttctcgcggaatcagactgttgataatatcttcagttgatctcaacaacgttactcgcatatcgattcactggaacatgttgtgctcccaaaacat 6902069  T
Q  328 gctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat-acgaacgtattccaccctcctt 426  Q
    |||||||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||||||||||||| ||||||  |||| || ||| |||||||||    
T  6902068 gctcgtcacgttttcgtcgttcgttaattccacccaactgaatgatattctcccctcgtcgagcgttggacgtttatgccgaatgtgttcaaccctcctt 6901969  T
Q  427 gcgtctctggggtt 440  Q
    | ||||| ||||||    
T  6901968 gtgtctccggggtt 6901955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 290 - 427
Target Start/End: Complemental strand, 18392179 - 18392035
Alignment:
Q  290 gcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtc 387  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18392179 gcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtaaatgatactctcccctcgtc 18392080  T
Q  388 gagcgttggatgtttat-----acgaacgtattccaccctccttg 427  Q
     ||||||||| ||||||     |||||||||||||||||||||||    
T  18392079 aagcgttggacgtttataccgaacgaacgtattccaccctccttg 18392035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 108 - 295
Target Start/End: Complemental strand, 18393674 - 18393486
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattacccc-atttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | ||||||| ||||| || | || ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  18393674 aaggaaaaacatgaatgccgagcgaaatacttgagtcctagtcgtttggcaagtttgaattaccccnatttcagaggtaagacaatttttgtagttggaa 18393575  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatat 295  Q
    |||| |||||||| | ||||||||||||| |||| ||||||| ||||| ||||||| || |||| |||||||||||||||| |||||||    
T  18393574 tgcaccttaccctcactaatgacgatcttctggcagaatcaagttgtttatgatatcttcagttgatctcagcaacgttacacgcatat 18393486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 286 - 440
Target Start/End: Original strand, 39799902 - 39800059
Alignment:
Q  286 acccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccct 383  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  39799902 acccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtgacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccct 39800001  T
Q  384 cgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||||||||| ||||||| | ||||| ||||||| |||||| |||| |||||||    
T  39800002 tgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctttggggtt 39800059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 223 - 376
Target Start/End: Original strand, 40677372 - 40677527
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| | ||||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||  | |||||||| ||||||||    
T  40677372 taatgacgatcttctagcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactagaacatgtcgtgctccc 40677471  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatact 376  Q
    | ||||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  40677472 agaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtggatgatact 40677527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 302 - 440
Target Start/End: Complemental strand, 34639093 - 34638955
Alignment:
Q  302 tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtt 401  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||| ||||||||||||| |||||||||| |||    
T  34639093 tggaacatgctgtgctcccaaaacatgctcgtcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgttgagcgttggacgtt 34638994  T
Q  402 tata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| || ||||| |||||||| ||||||||||||    
T  34638993 tataccgaaggtgttcca-cctccttgtgtctctggggtt 34638955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 440
Target Start/End: Complemental strand, 16253728 - 16253465
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttga 256  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||| |  | || |||||  |||| |||||||| ||| ||||||||| ||| ||    
T  16253728 caagtttgaattacctcatttcagag-taagacaattgttgtagttggaaggtgtatt-ccctacctaatcacgatcttctggtggaatcaaactgtcga 16253631  T
Q  257 tgatatttttagttaatctcagcaacgttacccgcatatcgatcctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaact 356  Q
    | |||| ||||||| ||||||||||||||||          ||    |||     |||||||||||||||||||  ||||||| |||||||||||||| |    
T  16253630 taatatctttagttgatctcagcaacgttac----------at----gaa-----tgtgctcccaaaacatgctgctcacgttatcgtcgttctttaatt 16253550  T
Q  357 ccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||| | ||||||| |||||| ||||  || |||||  ||||||| |||||||||||||||||||||| ||| | ||||||    
T  16253549 ccacccaacttaatgatattctcccatcgttaagtgttgggcgtttataccgaacgtattccaccctccttgtgtcccgggggtt 16253465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 32735102 - 32735191
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 202  Q
    |||||||||| || ||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32735102 aaaacatgaatgtcgggggaaatgcttgagtcat-gttgtttggcaagtttgaatttaccccatttcagaggtaagacaattgttgtagtt 32735191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 10359955 - 10359853
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  |||| |||||||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  10359955 aaggaaaaacatgaatgcggggcaaaatgcttgagtcat-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaa 10359858  T
Q  207 tgcat 211  Q
    |||||    
T  10359857 tgcat 10359853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 151 - 284
Target Start/End: Original strand, 18036088 - 18036220
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaa 248  Q
    |||| |||||||| || || | ||||||||||||||||||||||||||||||||||  ||||| |   ||||  |||| |||||||| ||||||||||||    
T  18036088 gtttagcaagtttaaaatatctcatttcagaggtaagacaattgttgtagttggaaggtgcattt---cctacctaatcacgatcttctggcggaatcaa 18036184  T
Q  249 attgttgatgatatttttagttaatctcagcaacgt 284  Q
    ||||||||  |||||||||||| ||||| |||||||    
T  18036185 attgttgagaatatttttagttgatctctgcaacgt 18036220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 151 - 282
Target Start/End: Complemental strand, 43491732 - 43491600
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| ||| ||||||||||||||||||  ||||| ||| || ||  ||||||||||||| |||||||||||    
T  43491732 gtttggcaagtttgaattaccccatt-caaagg-aaggcaattgttgtagttggaaggtgcattctttccgtacctaatgacgatcttctggcggaatca 43491635  T
Q  248 aattgttgatgatatttttagttaatctcagcaac 282  Q
    || | |||||||||| || |||| |||||||||||    
T  43491634 aacttttgatgatatcttcagttgatctcagcaac 43491600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 42120463 - 42120564
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  ||| | ||||||||| |||| |||||||||||||||||||||  |||  |||| |||||||||||||||||||||||||||    
T  42120463 aaggaaaaacatgaatgcggggtgcaatgcttgagtcat-gttgtttggcaagtttgaattttccccattcaaaggtaagacaattgttgtagttggaat 42120561  T
Q  208 gca 210  Q
    |||    
T  42120562 gca 42120564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 111 - 210
Target Start/End: Original strand, 22493725 - 22493823
Alignment:
Q  111 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgt-ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 209  Q
    |||||||||||| |  ||||||||||||||| |||| ||||| ||||||||||||||||  |||||| || |||||||||||||||||||||||||||||    
T  22493725 gaaaaacatgaatgcggggcgaaatgcttgagtcat-gttgtgttggcaagtttgaattttcccatt-caaaggtaagacaattgttgtagttggaatgc 22493822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 284
Target Start/End: Original strand, 31991885 - 31991994
Alignment:
Q  174 atttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagtta 271  Q
    |||||||||||||||||||||||||||||||||  ||||   | |||||  |||| |||||||| ||||||||||||||||||||  |||| || ||||     
T  31991885 atttcagaggtaagacaattgttgtagttggaaggtgca---ttccctacctaatcacgatcttctggcggaatcaaattgttgagaatatcttcagttg 31991981  T
Q  272 atctcagcaacgt 284  Q
    ||||| |||||||    
T  31991982 atctctgcaacgt 31991994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 16582312 - 16582375
Alignment:
Q  147 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||||||||||| | |||||| |||| ||||||||||||||||||||||||||||||    
T  16582312 tgttgtttggcaagtttgaactgacccca-ttcaaaggtaagacaattgttgtagttggaatgca 16582375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 39799753 - 39799886
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | |||||||||| || || | ||||||||||| ||||||||| | | |||| || ||| |||||||||||||| |||||||    
T  39799753 aaggaaaaacatgaatgccgagcgaaatgctcgagtcct-gttgtttggcaggtttgaatttatctcatt-caaagg-aagacaattgttgtggttggaa 39799849  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcgga 243  Q
    ||||  ||||||||| ||||||||||||| |||||||    
T  39799850 tgcacattaccctaactaatgacgatcttctggcgga 39799886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 18393805 - 18393898
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    |||||||||| |  ||| ||||||||||| || | |||||||| |||||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  18393805 aaaacatgaatgccgggggaaatgcttgagtcct-gttgtttgacaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaat 18393898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 440
Target Start/End: Complemental strand, 31770427 - 31770352
Alignment:
Q  366 tgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||| |||| || |||||||| |||| |||||||    
T  31770427 tgaatgatactctcccctcgtcgaacgttggacgtttataccgaacatattacatcctccttgtgtctatggggtt 31770352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 301
Target Start/End: Original strand, 27650378 - 27650502
Alignment:
Q  176 ttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaat 273  Q
    |||||||||||| ||||||||||||||||||  |||||    |||||  |||| |||||||| ||||||||||||| ||||||  |||| || |||| ||    
T  27650378 ttcagaggtaagtcaattgttgtagttggaaggtgcatt---ccctacctaatcacgatcttctggcggaatcaaactgttgagaatatcttcagttgat 27650474  T
Q  274 ctcagcaacgttacccgcatatcgatcc 301  Q
    ||||||||||| ||   |||||||||||    
T  27650475 ctcagcaacgtgacaaacatatcgatcc 27650502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 440
Target Start/End: Original strand, 40678763 - 40678832
Alignment:
Q  372 atactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||| |||||||| |||||| |||||||| |||||  |||||||||||||| ||||||||||||    
T  40678763 atactctcccttcgtcgagtgttggacgtttataccgaacgcgttccaccctccttgtgtctctggggtt 40678832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 8557444 - 8557381
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||| ||||||||| | |||||| || ||||||||||||||||||||||||||||||    
T  8557444 tgttgtttggcaggtttgaatttatcccatt-caaaggtaagacaattgttgtagttggaatgca 8557381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 33404502 - 33404558
Alignment:
Q  150 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| |||||||||||||  |||| |||||||||||||||||||||||| ||||||    
T  33404502 tgtttagcaagtttgaatttacccaattcagaggtaagacaattgttgtatttggaa 33404558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 10364349 - 10364296
Alignment:
Q  153 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||||  |||  |||| ||||||||||||||||||||||||||    
T  10364349 ttggcaagtttgaattttccccattcaaaggtaagacaattgttgtagttggaa 10364296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 16253944 - 16254000
Alignment:
Q  151 gtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||| ||| ||||||||| |||||||||||||  |||||||||||||||||||||||    
T  16253944 gtttagcaggtttgaatttaccccatttcagatataagacaattgttgtagttggaa 16254000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 29111601 - 29111664
Alignment:
Q  147 tgttgtttggcaagtttgaattaccc-catttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||||| ||||||||||  || ||||| | |||||||| |||||||||||||||||||||    
T  29111601 tgttgtttggcgagtttgaatttgcctcatttaa-aggtaagataattgttgtagttggaatgca 29111664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 35492128 - 35492179
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||||||||| ||| |||| || ||||||||||||||||||||||||    
T  35492128 ttggcaagtttgaatttaccacatt-caaaggtaagacaattgttgtagttgg 35492179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 35492316 - 35492376
Alignment:
Q  146 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||| |||||||||||||  |||  ||||| ||||||| |||||||| ||||||||    
T  35492316 ttgttgtttagcaagtttgaatttgccccattcagtggtaagataattgttgcagttggaa 35492376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 41498696 - 41498742
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 205  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  41498696 caagtttgaattgccccatt-cagagg-aagacaattgttgtagttgga 41498742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 43491944 - 43491995
Alignment:
Q  153 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  43491944 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttgg 43491995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 110 - 437
Target Start/End: Original strand, 33799437 - 33799767
Alignment:
Q  110 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 209  Q
    ||||||||||||||| |||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33799437 ggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 33799536  T
Q  210 atcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaac 307  Q
    | |||||||||| ||||||||||||| |||||||||||| ||||||||||||| || |||| ||||||||||||||| |||||||||||||  |||||||    
T  33799537 accttaccctaactaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttatccgcatatcgatccactggaac 33799636  T
Q  308 atgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat-ac 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  33799637 atgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataac 33799736  T
Q  407 gaacgtattccaccctccttgcgtctctggg 437  Q
    |||| ||||||||||||||||| ||| ||||    
T  33799737 gaacatattccaccctccttgcatctatggg 33799767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 28706026 - 28706361
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    |||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  28706026 aaggaaaaacatgaacgttgggcgaaatgcttgagtcattgccgtttggcaagtttgaattaccccatttcacaagtaagacaattgttgtagttggaat 28706125  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||| ||||| ||||||||||||   ||||||||||| || |||| |||||| ||||||||| ||||||||||||  ||  |    
T  28706126 gcaccttaccctaactaatgacaatcttctggcggaatcaagcggttgatgatatcttcagttgatctcaacaacgttacacgcatatcgatccactaaa 28706225  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||    
T  28706226 acatgttgtgctcccaaaacatgctcgtcacgttttcgttgttctttaactccactcaagtgaatgatattctcccctcgtcgagcgttggacgtttata 28706325  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||||||||||||||||||||||||||||||||||    
T  28706326 ccgaacgtattccaccctccttgcgtctctggggtt 28706361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 43638561 - 43638895
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||||| || | | | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43638561 aaggaaaaacatgaatgccgagcgaaatgcttgagtcctggctatttggcaagtttgaattaccccatttcagaggtaagacaattattgtagttggaat 43638660  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgat--cctgga 305  Q
    ||| |||||||||| ||||||||||||| ||||| |||||| ||||||||||||| || |||| |||||||||||||||| |||||||||||   |||||    
T  43638661 gcaccttaccctaactaatgacgatcttctggcgaaatcaagttgttgatgatatcttcagttgatctcagcaacgttacgcgcatatcgatgcactgga 43638760  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  43638761 acatgttgtgctcccaaaacatgctcgtcacattttcgtcgttctttaactccacccaagtgaaggatactctcccctcgtcgagcgttggacgtttata 43638860  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||||||||||||||||||||||| ||||||||||    
T  43638861 ccgaacgtattccaccctccttgcg-ctctggggtt 43638895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 42168844 - 42169179
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| |||||||||||||||| |||| |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42168844 aaggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcaaaggtaagacaattgttgtagttggaat 42168943  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    |||||||| ||||| ||||||||||||| ||||||||||||  |||||||||||| || |||| ||||| |||||||||||||||||||||||  |||||    
T  42168944 gcatcttatcctaactaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctctgcaacgttacccgcatatcgatccactgga 42169043  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||||||| |||||||||||||||||||| |||||||    
T  42169044 acatgttgtgctcccaaaacatgctcgtcacgttttcgttgttcgttaattccacccaagggaatgatactttcccctcgtcgagcgttggacgtttata 42169143  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||  |||||||||||| | ||||| ||||||    
T  42169144 ccgaacgcgttccaccctcctcgtgtctccggggtt 42169179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 43693467 - 43693132
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||||| || |||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43693467 aaggaaaaacatgaatgccgagcgaaatgcttgagtccttgccgtttggcaagtttgaattaccccatttcagaggtaagaaaattgttgtagttggaat 43693368  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||| |||||||| ||||||||||||| || |||| ||||||||||||| |||||||||||||||  |||||    
T  43693367 gcaccttaccctaactaatgacgatcttctggaggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactgga 43693268  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||  ||||||||| ||||||||||| |||||||    
T  43693267 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaattccacccaaatgaatgatatcctcccctcgccgagcgttggacgtttata 43693168  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||| |||||||||||||| ||||||||||||    
T  43693167 ccgaacgtgttccaccctccttgtgtctctggggtt 43693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 111 - 440
Target Start/End: Complemental strand, 34615280 - 34614948
Alignment:
Q  111 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||||||||||||||||||||||||| |||| || ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34615280 gaaaaacatgaacgttgggcgaaatgcttgagtcatggtcgtttgtcaagtttgaattaccccatttaagaggtaagacaattgttgtagttggaatgca 34615181  T
Q  211 tcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaaca 308  Q
     |||||||||| |||| || ||||| ||| |||||||| ||||||||||||| || |||| ||||||||||||||||||||||||| |||  ||||| ||    
T  34615180 ccttaccctaactaattactatcttctggtggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcaatccactggatca 34615081  T
Q  309 tgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cg 407  Q
    |||||||||||||||||||| |||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| ||||||| ||    
T  34615080 tgttgtgctcccaaaacatgttcgtcacgttttcgtcgttcgttaatttcacccaagtgaatgatactttcccctcgtcgagcgttggacgtttataccg 34614981  T
Q  408 aacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||||||||||||| ||||| ||||||    
T  34614980 aacgtgttccaccctccttgtgtctccggggtt 34614948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 38033809 - 38034144
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| |||||||||||||||| |||| |  ||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38033809 aaggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttatcaagtttgaattacccaatttcagaggtaagacaattgttgtagttggaat 38033908  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| |||||||||||||  |||||||||||  | |||||||||| || |||| |||||||||||||||||||||||||||||  || ||    
T  38033909 gcaccttaccctaactaatgacgatcttccggcggaatcaagctattgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactaga 38034008  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||| |||||||| | |||||||    
T  38034009 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaggtgaatgatactctcccctcgtagagcgttgaacgtttata 38034108  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||| |||||||||||||| |||| |||||||    
T  38034109 ccgaacgtgttccaccctccttgtgtctttggggtt 38034144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 108 - 436
Target Start/End: Complemental strand, 40415587 - 40415256
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||| | | || |  |||||| |||||||||||||||||||||| |||||||| |||||||||||||| |||    
T  40415587 aaggaaaaacatgaatgccgagcgaaatgcttaagttatggccgtttggtaagtttgaattaccccatttcataggtaagagaattgttgtagttgaaat 40415488  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcct--gga 305  Q
    ||| |||||||||| ||||||||||||| || |||||||||  |||||||||||| || |||| |||||| |||||| ||| ||||||||||||   |||    
T  40415487 gcaccttaccctaactaatgacgatcttctgacggaatcaagctgttgatgatatcttaagttgatctcaacaacgtcacctgcatatcgatccacggga 40415388  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  40415387 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgataccctcccctcgtcgagcgttggacgtttata 40415288  T
Q  406 -cgaacgtattccaccctccttgcgtctctgg 436  Q
     ||||||| |||||||||||||| ||||||||    
T  40415287 ccgaacgtgttccaccctccttgtgtctctgg 40415256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 108 - 437
Target Start/End: Complemental strand, 40414938 - 40414608
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||||| || | |  |||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40414938 aaggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttgataagtttgaattaccccatttcagaggtaagagaattgttgtagttggaat 40414839  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| ||||||||   ||||||||||||| ||| ||||||||  |||||||||||| || |||| ||||||||||||| ||||||||||| |||  ||| |    
T  40414838 gcaccttaccctc--taatgacgatcttctggtggaatcaagctgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatcaactgaa 40414741  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||| || |||||||    
T  40414740 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgataccctcccctcgtcgagtgttagacgtttata 40414641  T
Q  406 -cgaacgtattccaccctccttgcgtctctggg 437  Q
     ||||||| ||||||| |||||| |||||||||    
T  40414640 ccgaacgtgttccaccttccttgtgtctctggg 40414608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 147 - 440
Target Start/End: Original strand, 15032249 - 15032543
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  15032249 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaaatgttgtagttggaatgcaccttaccctaactaatgacgatcttctggcggaatc 15032346  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  15032347 aaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 15032446  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||| | |||| ||||||||||||    
T  15032447 cgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatacttgtgtctctggggtt 15032543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 26452654 - 26452320
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||| || || | |||||||| |||| || | ||||||||||| ||||||||| | | |||| || ||||| ||||||||||| ||||||||    
T  26452654 aaggaaaaacataaatgtcgagcgaaatgtttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtatgacaattgttgcagttggaa 26452557  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    | || |||||||||| ||||||||||||| | |||||||||| ||||||||||||| || |||| ||||||||||||| ||||||||||||||||  |||    
T  26452556 tacaccttaccctaactaatgacgatcttctagcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactgg 26452457  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  26452456 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttat 26452357  T
Q  405 a-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||| || |||||||||||||| ||||||||||||    
T  26452356 accgaaggtgttccaccctccttgtgtctctggggtt 26452320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 185 - 440
Target Start/End: Complemental strand, 41363909 - 41363651
Alignment:
Q  185 aagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgt 284  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||| |||||||| ||||||||||||| || |||| |||||||||||||    
T  41363909 aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttctggaggaatcaagttgttgatgatatcttcagttgatctcagcaacgt 41363810  T
Q  285 tacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccc 382  Q
     ||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  41363809 aacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacattttcgtcgttcgttaattccacccaagtgaatgatactctcccc 41363710  T
Q  383 tcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||||| || || |||| ||||||| |||||||||||||| ||||| ||||||    
T  41363709 tcgtcgagcgttagacgtgtataccgaacgtgttccaccctccttgtgtctccggggtt 41363651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 24861672 - 24861338
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| | | |||| || ||||||||||||||||| || |||||    
T  24861672 aaggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcagatggaa 24861575  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||||||| ||||||||||||| |||| ||||||| ||||||||||||| || |||| ||||||||||| | ||||||||||| ||||  | |    
T  24861574 tgcaccttaccctaactaatgacgatcttctggcagaatcaagttgttgatgatatcttcagttgatctcagcaacatcacccgcatatcaatccaattg 24861475  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  24861474 aacatgttgtgctcccaaaacatgctcgtcacattttcgtcgtttgttaattccacccaagtgaatgatactctccccccgtcgagcgttggacgtttat 24861375  T
Q  405 a-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||| || |||||||||||||| |||||| |||||    
T  24861374 accgaaggtgttccaccctccttgtgtctctagggtt 24861338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 183 - 440
Target Start/End: Complemental strand, 41275649 - 41275389
Alignment:
Q  183 gtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaac 282  Q
    ||||||||||| ||| |||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||||||| || |||| |||||||||||    
T  41275649 gtaagacaattattgcagttggaatgcaccttaccctaactaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaac 41275550  T
Q  283 gttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcc 380  Q
    || ||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||| |||||||    
T  41275549 gtcacccgcatatcgatccattggaacatgttgtgctctcaaaacatgctcgtcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcc 41275450  T
Q  381 cctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||||||| || ||||||| |||| || |||||||||||||| ||||||||||||    
T  41275449 cctcgtcgagcgtttgacgtttataccgaaggtgttccaccctccttgtgtctctggggtt 41275389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 2417243 - 2416910
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||||| || |  |||||||||| |||| | ||| | |||| || ||||||||||||||||| |||||||||    
T  2417243 aaggaaaaacatgaatgccgagcgaaatgcttgagtccta-ttgtttggcaggtttaatttatctcatt-caaaggtaagacaattgttgaagttggaat 2417146  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||| |||||||| ||||||||||||| ||  ||| |||||| |||||| ||| |||||||||||  |||||    
T  2417145 gcaccttaccctaactaatgacgatcttctggtggaatcaagttgttgatgatatcttcggttgatctcatcaacgtcacctgcatatcgatcaactgga 2417046  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| |||||  |||||| |||||||    
T  2417045 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgaaactctccccttgtcgaatgttggacgtttata 2416946  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||| || |||||||||||||| || |||||||||    
T  2416945 ccgaaggtgttccaccctccttgtgtttctggggtt 2416910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 129 - 440
Target Start/End: Original strand, 485166 - 485477
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||||||| |||||||||| ||||||    
T  485166 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaattgttgtagttggaatgcaccttaccctaactaatga 485262  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | | ||||||||||||||  | ||||||| |||||||||||||||    
T  485263 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcatccgcatatcgatccactagaacatgctgtgctcccaaaaca 485362  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  485363 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 485462  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  485463 tgtgtctctggggtt 485477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 44943080 - 44943300
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||| ||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  44943080 taatgacaatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctccc 44943179  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || |||    
T  44943180 aaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttatatcgaacgtgttacac 44943279  T
Q  420 cctccttgcgtctctggggtt 440  Q
    | |||||| ||||||||||||    
T  44943280 catccttgtgtctctggggtt 44943300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 41856973 - 41857193
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  41856973 taatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctccc 41857072  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||| ||||||||||| |||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  41857073 aaaatatgctcgtcacattttcgtcgttcgttaattccacccaagttaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 41857172  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||  ||||||||||||    
T  41857173 cctccttctgtctctggggtt 41857193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 150 - 440
Target Start/End: Complemental strand, 42603743 - 42603449
Alignment:
Q  150 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||||||||||||||||||||| || ||| |||||||||||||||| |  ||  ||||| | | || ||  ||||||||||||||||||||||||    
T  42603743 tgtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctaaaaggtgcattcattccgtacctaatgacgatcttttggcggaatc 42603646  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| ||  ||| || |||||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||    
T  42603645 aaacttttgatgatatattcggttgatttcagcaacgtcacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttcgt 42603546  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| |||||||||||||||||||| ||||||||||||||| ||||| ||||||| ||||||| |||| ||||||||  ||||||||||||    
T  42603545 cgttcgttaattccacccaagtgaatgataccctcccctcgtcgagcattggacgtttataccgaacgtgttccgccctccttctgtctctggggtt 42603449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 18440294 - 18440514
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| | ||| ||||||| | |||||||||| || |||| ||||||||||||| |||| |||||||||||  ||||||||||||||||||     
T  18440294 taatgacgatcttctcgcgtaatcaaacttttgatgatatcttcagtttatctcagcaacgtcaccctcatatcgatccactggaacatgttgtgctcct 18440393  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||||||||||||||||| |||||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  18440394 aaaacatgctcgtcacgttttcatcgttcgttaattctacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 18440493  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  18440494 cctccttgtgtctctggggtt 18440514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 40702649 - 40702355
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg--cat-cttaccctaattaatgac-gatcttttggcggaatc 246  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |  ||||  ||| | | || ||  ||||||| |||||||||||||||||    
T  40702649 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctaaaatgtgcattcattccgtacctaatgaccgatcttttggcggaatc 40702552  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| ||||||||||||| | ||||||||||||||  ||||||||||| || ||||||||||||||||||||||||||||    
T  40702551 aaacttttgatgatatattcagttgatctcagcaacgtcatccgcatatcgatccactggaacatgttttgttcccaaaacatgctcgtcacgttttcgt 40702452  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| ||||||||||||||||||| |||||| ||||||| ||||||| |||||||| |||||| |||||| ||||||  ||||||||||||    
T  40702451 cgttcgttaattccacccaagtgaatgatattctcccttcgtcgaacgttggacgtttatactgaacgtgttccactctccttctgtctctggggtt 40702355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 19242088 - 19242381
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||  ||||| | | |  ||  ||||||| ||||| | |  ||||||    
T  19242088 gtttggcaagtttgaactaccccatt-cagaga-aagacaattgttgtagttggaaggtgcattcattcggtacctaatgacaatcttctcgtagaatca 19242185  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| |||| |||||||| ||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||| |||    
T  19242186 aacttttgatgatatcttcagttgatcttagcaacgtcacccgcatatcgatccactggaacatgttgtattcccaaaacatgctcgtcacgtttttgtc 19242285  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| | |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||| |||||    
T  19242286 gttccttaattacacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctcgggtt 19242381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 19315272 - 19315565
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||  ||||| | | |  ||  ||||||| ||||| | |  ||||||    
T  19315272 gtttggcaagtttgaactaccccatt-cagaga-aagacaattgttgtagttggaaggtgcattcattcggtacctaatgacaatcttctcgtagaatca 19315369  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| |||| |||||||| ||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||| |||    
T  19315370 aacttttgatgatatcttcagttgatcttagcaacgtcacccgcatatcgatccactggaacatgttgtattcccaaaacatgctcgtcacgtttttgtc 19315469  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| | |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||| |||||    
T  19315470 gttccttaattacacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctcgggtt 19315565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 267 - 440
Target Start/End: Complemental strand, 26484748 - 26484572
Alignment:
Q  267 agttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaa 364  Q
    |||| |||||||||| ||||  |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  26484748 agttgatctcagcaatgttatgcgcatatcgatccactggaacatgctgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaa 26484649  T
Q  365 gtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||| |||||||    
T  26484648 gtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctttggggtt 26484572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 147 - 440
Target Start/End: Original strand, 31171740 - 31172035
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaa 244  Q
    ||||||||  ||||||||||||| | ||||||||||||||||||||||||||||||||||  |||||    || ||  |||| |||||||| ||||||||    
T  31171740 tgttgtttaacaagtttgaattatctcatttcagaggtaagacaattgttgtagttggaaggtgcatt---ccatacctaatcacgatcttctggcggaa 31171836  T
Q  245 tcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcctgg--aacatgttgtgctcccaaaacatgctcgtcacgttttc 342  Q
    ||||| ||||||| ||||||| |||| ||||||||||||| |||| |||||||||||  |  |||||| |||||| |  ||| ||| | |||| ||  ||    
T  31171837 tcaaactgttgataatattttcagttgatctcagcaacgtcacccacatatcgatccacggtaacatgctgtgcttctgaaaaatgtttgtcatgtcgtc 31171936  T
Q  343 gtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||| |||| ||||||||| ||||||||| |||||| ||||||| ||||||| |||||||| ||||||||||||||||||||| ||||| ||||||    
T  31171937 gtcgttcattaattccacccaactgaatgatattctcccatcgtcgaacgttggacgtttataccgaacgtattccaccctccttgtgtctccggggtt 31172035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 147 - 433
Target Start/End: Original strand, 3589188 - 3589478
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagag--gtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcgg 242  Q
    |||||||| |||||||||||||| | ||||||||||  |||||||||||||||||||| |||  |||||    |||||  |||| |||||||| ||||||    
T  3589188 tgttgtttagcaagtttgaattatctcatttcagagaggtaagacaattgttgtagtttgaaggtgcatt---ccctacctaatcacgatcttctggcgg 3589284  T
Q  243 aatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttt 340  Q
    ||||||| ||||||| || | || |||| |||||| ||| ||||| |||||||||||||  ||||||||  |||||||||||||||||| | |||||||     
T  3589285 aatcaaactgttgataatgtcttcagttgatctcaacaatgttacacgcatatcgatccactggaacatcctgtgctcccaaaacatgcccatcacgtta 3589384  T
Q  341 tcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctc 433  Q
    ||||||||| |||| ||||||||| ||||||||| |||||| | | | | |||| || ||||||| |||||||||||||||||||||| |||||    
T  3589385 tcgtcgttcattaattccacccaactgaatgatattctcccatagacaatcgtttgacgtttataccgaacgtattccaccctccttgtgtctc 3589478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 301 - 432
Target Start/End: Complemental strand, 16575827 - 16575695
Alignment:
Q  301 ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgt 400  Q
    ||||||||||||||| ||||||||||||||| || ||||||||| |||| |||| ||||||||| ||||||| ||||||| |||||||||||||||| ||    
T  16575827 ctggaacatgttgtggtcccaaaacatgctcatcccgttttcgttgttcgttaattccacccaactgaatgaaactctcctctcgtcgagcgttggacgt 16575728  T
Q  401 ttata-cgaacgtattccaccctccttgcgtct 432  Q
    ||||| |||||||||||||||||||||| ||||    
T  16575727 ttataccgaacgtattccaccctccttgtgtct 16575695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 319 - 440
Target Start/End: Complemental strand, 22548380 - 22548258
Alignment:
Q  319 ccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattcc 417  Q
    ||||||||||||||||||||||||||| ||  |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||| |||| || ||||    
T  22548380 ccaaaacatgctcgtcacgttttcgtcatttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttatatcgaatgtgttcc 22548281  T
Q  418 accctccttgcgtctctggggtt 440  Q
    |||||||||| ||||||||||||    
T  22548280 accctccttgtgtctctggggtt 22548258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 108 - 284
Target Start/End: Complemental strand, 22549408 - 22549236
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| | || ||||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||    
T  22549408 aaggaaaaacatgaatgctgagcgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaa 22549311  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgt 284  Q
    | || |||||||||| ||||||||||||| ||||||||||||   ||||||||||| || |||| || ||||||||||    
T  22549310 tacaccttaccctaactaatgacgatcttctggcggaatcaa---gttgatgatatcttcagttgatgtcagcaacgt 22549236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 203
Target Start/End: Complemental strand, 28705899 - 28705805
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttg 203  Q
    ||||||||||| ||| || ||||||||||||||| || | |||||||| ||||||||||||  |||  |||| |||||||||||||||||||||||    
T  28705899 aaggaaaaacacgaatgtggggcgaaatgcttgagtcct-gttgtttgacaagtttgaattttccccattcaaaggtaagacaattgttgtagttg 28705805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 42168717 - 42168616
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaat-taccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  ||||||||||||||| || | |||||||||||||||||| | |||||||||  | ||||| ||||||||||||||||||||    
T  42168717 aaggaaaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttggcaagtttgactgtaccccattcga-aggtaggacaattgttgtagttggaa 42168620  T
Q  207 tgca 210  Q
    ||||    
T  42168619 tgca 42168616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 40415751 - 40415814
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||| |||||||||  |||  |||| ||||||||||||||||||||||||||||||    
T  40415751 tgttgtttggcaggtttgaatttaccctattcaaaggtaagacaattgttgtagttggaatgca 40415814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 22549575 - 22549635
Alignment:
Q  150 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||||||    
T  22549575 tgtttggcaagtttgaattgaccccatttaa-aggtaagacaattgttgcagttggaatgca 22549635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 38033645 - 38033582
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| ||||||||||| ||  |||| || ||||||||||||||||||||||||||||||    
T  38033645 tgttgtttggtaagtttgaatttactacatt-caaaggtaagacaattgttgtagttggaatgca 38033582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 16576152 - 16576209
Alignment:
Q  149 ttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||||||| ||| |||| || |||||||| |||||||||||||||||    
T  16576152 ttgtttggcaagtttgaatttacctcatt-caaaggtaagataattgttgtagttggaa 16576209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 24861865 - 24861899
Alignment:
Q  176 ttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||| ||||||||||||||||||||||||||||||    
T  24861865 ttcaaaggtaagacaattgttgtagttggaatgca 24861899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 28167338 - 28167391
Alignment:
Q  153 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||||    
T  28167338 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttggaa 28167391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 44050900 - 44050996
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| || | ||||||||||||| || |||||||||| || ||||||||| | | |||| || ||||||||||||||| | ||||||||||||    
T  44050900 aaaacatgaatgtcgagcgaaatgcttgagtc-ttgttgtttgacaggtttgaatttatctcatt-caaaggtaagacaattgtggcagttggaatgca 44050996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 40415069 - 40415153
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgt 198  Q
    |||||||||| || ||| |||||| |||| || | ||||||||||| |||||||||  |||  |||| ||||||||||||||||||    
T  40415069 aaaacatgaatgtcgggtgaaatgattgagtcct-gttgtttggcaggtttgaatttaccctattcaaaggtaagacaattgttgt 40415153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 41856900 - 41856947
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtag 200  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  41856900 gtttggcaagtttgaattacccca-ttcaaagg-aagacaattgttgtag 41856947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 440
Target Start/End: Original strand, 12504911 - 12504943
Alignment:
Q  408 aacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||||||||||||| ||||||||||||    
T  12504911 aacgtattccaccctccttgtgtctctggggtt 12504943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 31171535 - 31171479
Alignment:
Q  151 gtttggcaagtttgaattaccc-catttcagaggtaagacaattgttgtagttggaa 206  Q
    |||| |||||||||||||| || ||||| |||||| ||| |||||||||||||||||    
T  31171535 gtttagcaagtttgaattaacctcattttagaggttagataattgttgtagttggaa 31171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 41856686 - 41856635
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||| ||||||||||| |||||||| || ||||||||||||||||||||||||    
T  41856686 ttggtaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttgg 41856635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 42603951 - 42604002
Alignment:
Q  153 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  42603951 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttgg 42604002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 101)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 47487923 - 47488258
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| |||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47487923 aaggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 47488022  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||| ||| ||||||||||||| ||||| ||||||  ||||||||| || || |||| |||||||||||||||||||||||||||||  || ||    
T  47488023 gcaccttaccataactaatgacgatcttctggcgaaatcaagctgttgatgacatcttcagttgatctcagcaacgttacccgcatatcgatcaactaga 47488122  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  47488123 aaatattgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatattctcccctcgtcgagcgttggacgtttata 47488222  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||||||||||||||||||| |||||||||||    
T  47488223 ccgaacgtattccaccctccttgcatctctggggtt 47488258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 111 - 440
Target Start/End: Original strand, 42571665 - 42571997
Alignment:
Q  111 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||| || | |||||||| |||| || | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42571665 gaaaaacatgaatgtcgagcgaaatgtttgagtcttggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 42571764  T
Q  211 tcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaaca 308  Q
     |||||| ||| ||||||||||||| |||||||||||| ||||||||||||| || |||| |||||||||||||||||||||||||||||  ||||||||    
T  42571765 ccttaccttaagtaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaaca 42571864  T
Q  309 tgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cg 407  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||    
T  42571865 tgttgtgctcccaaaacatgctcttcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcattggacgtttataccg 42571964  T
Q  408 aacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||||||||||||| ||||||| ||||    
T  42571965 aacgtgttccaccctccttgtgtctctgaggtt 42571997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 110 - 440
Target Start/End: Original strand, 39224085 - 39224418
Alignment:
Q  110 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgc 209  Q
    ||||||||||||| |  | ||||||||||||| || | |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39224085 ggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagagaattgttgtagttggaatgc 39224184  T
Q  210 atcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaac 307  Q
    | |||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||  |||||||    
T  39224185 accttaccctaactaatgacgatcttctggcggaatcaagttgttgatgatatatttagttgatctcagcaacgtcacccgcatatcgatccactggaac 39224284  T
Q  308 atgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-c 406  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| ||||||| || ||||||| |    
T  39224285 atgttgtgctcccaaaacatgctcgtcacgttttcgtcattctttaattccacccaagtgaatgataccctcccctcgttgagcgttagacgtttatacc 39224384  T
Q  407 gaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||| |||||||||||||| ||||||||||||    
T  39224385 gaacgtgttccaccctccttgtgtctctggggtt 39224418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 27035204 - 27035539
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| || | |||||||| |||| || | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27035204 aaggaaaaacatgaatgtcgagcgaaatgtttgagtcctggctgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 27035303  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||| ||||| ||||||||||||| ||| |||||||| ||||||||||||| || |||| |||||||||||||||||||||||||||||  |||||    
T  27035304 gcaccttatcctaactaatgacgatcttctggtggaatcaagttgttgatgatatcttaagttgatctcagcaacgttacccgcatatcgatccactgga 27035403  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    | ||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  27035404 atatggtgttctcccaaaacatactcgtcacgttttcgtcattctttaactccacccaagtgaatgatacccttccctcgtcgagcgttggacgtttata 27035503  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     || ||||||||||||||||||| ||||||||||||    
T  27035504 ccggacgtattccaccctccttgtgtctctggggtt 27035539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 107 - 440
Target Start/End: Complemental strand, 45689440 - 45689106
Alignment:
Q  107 gaaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||||||||||||||||||||||| |||| |  ||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  45689440 gaaggaaaaacatgaacgttgggcgaaatgcttgagtcatggccgtttggcaagtttgaattatccaatttcagaggtaagacaattgttgtagttggaa 45689341  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgg 304  Q
    |||| |||||||||| ||||||||||||| ||||||||||||  |||||||||||| || |||| ||||||||||||| ||||||||||| |||  ||||    
T  45689340 tgcaccttaccctaactaatgacgatcttatggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgtcacccgcatatccatccactgg 45689241  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||| |||||||||||||| | |||     
T  45689240 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattctccccccgtcgagcgttggacg-ttaa 45689142  T
Q  405 acgaacgtattccaccctccttgcgtctctggggtt 440  Q
     | ||| |||||||||||||||| |||| |||||||    
T  45689141 ccaaacatattccaccctccttgtgtctttggggtt 45689106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 48568290 - 48568625
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| | || |||||||||||||||| | |   |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  48568290 aaggaaaaacatgaatgctgagcgaaatgcttgaatcctggccatttggcaagtttgagttacccaatttcagaggtaagacaattgttgtagttggaat 48568389  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||| ||||| ||||| |||||| ||||||||||||| || |||| |||||||||||||||||||||||||||||  |||||    
T  48568390 gcaccttaccctaactaatgacaatcttctggcgaaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactgga 48568489  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  48568490 acatgttgtgctcccaaaacatgctcgtcacgttttcatcattctttaactccacccaagtgaatgatattctcccctcgtcgagcgttggacgtttata 48568589  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||||  ||||||||||||||| |||| |||||||    
T  48568590 ccgaactaattccaccctccttgtgtctttggggtt 48568625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 108 - 433
Target Start/End: Complemental strand, 35576659 - 35576331
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    |||| |||||||||||| | |||||||||||||| |||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35576659 aagggaaaacatgaacgctaggcgaaatgcttgagtcatggccgtttggcaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaat 35576560  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| |||||||||||||||  | |||    
T  35576559 gcaccttaccctaactaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccaccgga 35576460  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  35576459 acatgctgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatattctcccctcatcgagcgttggacgtttata 35576360  T
Q  406 -cgaacgtattccaccctccttgcgtctc 433  Q
     ||||||| |||||||||||||| |||||    
T  35576359 ccgaacgtgttccaccctccttgtgtctc 35576331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 108 - 404
Target Start/End: Original strand, 46180166 - 46180465
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| |||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46180166 aaggaaaaacatgaacgctgggcgaaatgcttgagtcatggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 46180265  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| |||| |||||||  |||||||||||| || | || |||||| ||||||||||| ||||||||||  |||||    
T  46180266 gcaccttaccctaactaatgacgatcttctggcagaatcaagctgttgatgatatcttcaattgatctcaacaacgttacccacatatcgatccactgga 46180365  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccaccca-agtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  46180366 acatgctgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccagagtgaatgatactctcccctcgtcgagcgttggacgtttat 46180465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 50068145 - 50068480
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| |||||||||||||||| |||| |  ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  50068145 aaggaaaaacatgaacgatgggcgaaatgcttgagtcatggccgtttgacaagtttgcattaccccatttcagagctaagacaattgttgtagttggaat 50068244  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| ||||| |||| ||||||||||||| ||||||||||||  |||||| ||||| || |||| |||||||||||||||||||||||||||||  |||||    
T  50068245 gcaccttactctaactaatgacgatcttctggcggaatcaagctgttgacgatatcttcagttgatctcagcaacgttacccgcatatcgatccactgga 50068344  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||| ||||||||||||||||| ||||||| |||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||  || |||    
T  50068345 acatgatgtgctcccaaaacatgttcgtcacatttttgtcgttctttaaatccacccaagtgaatgatactctccactcgtcgagtgttggaccttcata 50068444  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||| |||||||||||||||||||||||||||||    
T  50068445 ccgaacatattccaccctccttgcgtctctggggtt 50068480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 146 - 440
Target Start/End: Original strand, 12791197 - 12791494
Alignment:
Q  146 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaat 245  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| |||||||||    
T  12791197 ttgtcgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcaccttatcctaactaatgacgatcttctggcggaat 12791296  T
Q  246 caaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcg 343  Q
    |||| | |||||||||| || |||| ||||||  ||||| |||||||||||||||  ||||||||||||||||||| |||| ||||||||||||||||||    
T  12791297 caaacttttgatgatatcttcagttgatctcaaaaacgtcacccgcatatcgatccactggaacatgttgtgctccaaaaaaatgctcgtcacgttttcg 12791396  T
Q  344 tcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| |||| ||||||||||||    
T  12791397 tcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctacttgtgtctctggggtt 12791494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 41874770 - 41875105
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||| ||| | || || |||||||||| || | |  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41874770 aaggaaaaacacgaatgctgagcaaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagtttgaat 41874869  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| |||| |||||||| |||||||||||| ||| | ||||||| ||||||| ||||||||||| |||||||||||||||||  || ||    
T  41874870 gcaccttaccctaactaataacgatcttctggcggaatcaagttgctaatgatatctttagttgatctcagcaacattacccgcatatcgatccactaga 41874969  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| |||    
T  41874970 acatgttgtgctcccaaaacatgctcgtcacattttcgtcgttatttaactccacccaagtgaatgatactctcccctcttcgagcattggacgttgata 41875069  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||||  ||||||||||||||| |||| |||||||    
T  41875070 ccgaactaattccaccctccttgtgtctttggggtt 41875105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 49598777 - 49599095
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| ||||| |||| ||||| |||| |  |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  49598777 aaggaaaaacatgaacgatgggcaaaatccttgagtcatggccgtttggcaagtttgaattacccgatttcagaggtaagacgattgttgtagttggaat 49598876  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgga 305  Q
    ||| |||||||||| ||||||||||||| |||||||||||| ||||||||                ||||||||||||||||||||||||||||  ||||    
T  49598877 gcaccttaccctaactaatgacgatcttctggcggaatcaagttgttgat----------------ctcagcaacgttacccgcatatcgatccactgga 49598960  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||    
T  49598961 acatgttgtgctcccaaaacatgcttgtcacgttt-cgtcattctttaactccactcaagtgaatgatactctcccctcgtcgagtgttgaacgtttata 49599059  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||||||||||||||||||||||||||||||||||    
T  49599060 ccgaacgtattccaccctccttgcgtctctggggtt 49599095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 108 - 433
Target Start/End: Original strand, 49262874 - 49263202
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| ||||||||||||| || |||| |  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  49262874 aaggaaaaacatgaacgctgggcgaaatgctggagtcatggccgtttggcaagtttgaatcaccccatttcagaggtaagacaattgttgtagttggaat 49262973  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||| ||| |||||| ||| || | | ||||||||  |||||||||||| || |||| |||||| |||||||||| |||||| ||||  |||||    
T  49262974 gcaccttaccataactaatgaagatattctagaggaatcaagatgttgatgatatcttcagttgatctcaacaacgttaccagcatatagatccactgga 49263073  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||||||||||||||| ||  |||| ||||| ||||||||||||||||||||||||| |||||||||| |||||||    
T  49263074 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcttttgttaattccactcaagtgaatgatactctcccctcgttgagcgttggacgtttata 49263173  T
Q  406 -cgaacgtattccaccctccttgcgtctc 433  Q
     ||||||| ||||||||| |||| |||||    
T  49263174 ccgaacgtgttccaccctacttgtgtctc 49263202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 146 - 423
Target Start/End: Complemental strand, 3658755 - 3658475
Alignment:
Q  146 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaat 245  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||  ||||||||||||| |||||||||    
T  3658755 ttgtcgtttggcaagtttgaattaccccatttcagaggtaagacgattgttgtagttggaatgcaccttaccctacctaatgacgatcttctggcggaat 3658656  T
Q  246 caaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcg 343  Q
    |||| | |||||||||| || |||| ||||||||||||||||  |||||||||||  || ||||||||||||||||||||||| | |||||||||||| |    
T  3658655 caaacttttgatgatatcttcagttgatctcagcaacgttacttgcatatcgatccactagaacatgttgtgctcccaaaacacgttcgtcacgtttttg 3658556  T
Q  344 tcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctc 423  Q
    |||||| |||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| ||||||||||    
T  3658555 tcgttcgttaattccacccaagtgaatgatactctctcctcgtcgagcgttggacgtttataccgaacgtgttccaccctc 3658475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 29762108 - 29762442
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||    | ||||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||    
T  29762108 aaggaaaaacatgaattccgagcgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaa 29762205  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||||||| |||||| |||||| |||||||||||| |||||||||||||||| |||| |||||| |||||| ||||| ||||||||||  |||    
T  29762206 tgcaccttaccctaactaatgatgatcttctggcggaatcaagttgttgatgatattttcagttgatctcatcaacgtcacccgtatatcgatccactgg 29762305  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  29762306 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttat 29762405  T
Q  405 a-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||| || |||||||||||||| |||||| |||||    
T  29762406 accgaaggtgttccaccctccttgtgtctctagggtt 29762442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 51270121 - 51269787
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | ||||||||||||| || | ||||||| ||| ||||||||| | | |||| || ||||||||||||||||| ||||||||    
T  51270121 aaggaaaaacatgaatgccgagcgaaatgcttgagtcct-gttgtttagcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaa 51270024  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgg 304  Q
    |||| |||||||||| ||||||||||||| |||||||||||| ||||||||||||| || |||| ||| ||||||||| |||||||||||||||  ||||    
T  51270023 tgcaccttaccctaactaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatcccagcaacgtcacccgcatatcgatccactgg 51269924  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||| ||||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  51269923 aacatgctgtgctcccaaaacatgctcgtcacgttttcgtcgtttgttaattccacccaactgaatgaaactctcccctcgtcgagcgttggacgtttat 51269824  T
Q  405 ac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    || ||| || |||||||||||||| ||||||||||||    
T  51269823 acagaaggtgttccaccctccttgtgtctctggggtt 51269787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 110 - 440
Target Start/End: Complemental strand, 29436290 - 29435958
Alignment:
Q  110 ggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatg 208  Q
    ||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| |   |||| || |||||||| |||||||| ||||||||||    
T  29436290 ggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatttcatt-caaaggtaagaaaattgttgcagttggaatg 29436193  T
Q  209 catcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaa 306  Q
    || |||||||||| ||||||||||||| ||||  |||||| ||||||||||||| || |||| ||||||||||||| |||||| |||||||||  |||||    
T  29436192 caccttaccctaactaatgacgatcttctggcttaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcgtatcgatccactggaa 29436093  T
Q  307 catgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata- 405  Q
    |||| ||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||| |||||||     
T  29436092 catgctgtactcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccatcgtcgagcgttggacgtttatac 29435993  T
Q  406 cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||| |||||||||||||| ||||||||||||    
T  29435992 cgaacgtgttccaccctccttgtgtctctggggtt 29435958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 44337206 - 44337540
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| || | ||||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| | ||| ||    
T  44337206 aaggaaaaacatgaatgtcgagcgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcatttgaaa 44337303  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgg 304  Q
    |||| |||||||||| ||||||||||||| ||||||||||| |||||||||||||| || |||| ||||||||||||| |||||||||||||||  |||     
T  44337304 tgcaccttaccctaactaatgacgatcttctggcggaatcatattgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactga 44337403  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||||||||| |||||||||||||||||||||||||||||||  | || ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  44337404 aacatgttgtgcacccaaaacatgctcgtcacgttttcgtcgtttgtgaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttat 44337503  T
Q  405 a-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||| || ||||||| |||||| ||||||||||||    
T  44337504 accgaaggtgttccaccatccttgtgtctctggggtt 44337540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 181 - 440
Target Start/End: Original strand, 27486649 - 27486911
Alignment:
Q  181 aggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagca 280  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||  ||||||||||| ||||||||||||| || |||| |||||||||    
T  27486649 aggtaagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttcaggcggaatcaagttgttgatgatatcttcagttgatctcagca 27486748  T
Q  281 acgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactct 378  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||| | |||||    
T  27486749 acgtcacccgcatatcgatccaatggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtttgttaattccacccaagtgaattaaactct 27486848  T
Q  379 cccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||||||||| ||||||| |||| ||  || |||||||||| ||||||||||||    
T  27486849 cccctcgtcgagcgttggacgtttataccgaaggtgatctaccctccttgtgtctctggggtt 27486911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 14173686 - 14173979
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |||||  ||||| | |||| ||  ||||||||||||| |||||||||||    
T  14173686 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaaggtgcattcataccgtacctaatgacgatcttctggcggaatca 14173783  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||    
T  14173784 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtcctcccaaaacatgctcgtcacgttttcgtc 14173883  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| ||||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  14173884 gttcgttaattccacccaagtgaatgatattctcccctcatcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 14173979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 147 - 440
Target Start/End: Complemental strand, 44597982 - 44597686
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaat 245  Q
    |||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||||||  ||||||||| |||||||||||||  ||||||||    
T  44597982 tgttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaatgcactttaccctaactaatgacgatcttccggcggaat 44597884  T
Q  246 caaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcg 343  Q
    ||| ||||||||||||| || |||| |||||| |||||| |||| |||||||||||  ||||||||| |||||||||||||||| ||| |||||||||||    
T  44597883 caagttgttgatgatatcttcagttgatctcatcaacgtcacccacatatcgatccactggaacatgctgtgctcccaaaacatactcatcacgttttcg 44597784  T
Q  344 tcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||| |||| || |||||||||||||| ||||||||||||    
T  44597783 tcgttcgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctggggtt 44597686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 13973202 - 13972909
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |||||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  13973202 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatcttatggcggaatca 13973105  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || | || |||||||||| || |||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  13973104 aacttttgatgatatcttcaattgatctcagcaatgtcacccgcatattgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 13973005  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  13973004 gttcgttaattccacccaagtgaatgatactctcccctagtcgagtgttggacgtttatactgaacgtattccaccctccttgcgtctctggggtt 13972909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 152 - 440
Target Start/End: Original strand, 30309762 - 30310047
Alignment:
Q  152 tttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaatt 251  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||  |    
T  30309762 tttggcaagtttgaattaccccatttcggaggtaagataattgttgtagttggaatgcaccttaccctaactaatgacgatcttctggcggaatcaagct 30309861  T
Q  252 gttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttc 349  Q
    ||||||||||| || |||| |||||      || ||||||||||||||||  || ||| |  ||||||||||||||||||||||||||||||||||||||    
T  30309862 gttgatgatatattcagttgatctc------gtcacccgcatatcgatccactgaaacgtcctgtgctcccaaaacatgctcgtcacgttttcgtcgttc 30309955  T
Q  350 tttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||||||||||||||||||| |||||| ||||||| |||||| ||||||| ||||||| |||||||||||||  |||| |||||||    
T  30309956 tttaattccacccaagtgaatgataccctccccccgtcgagtgttggacgtttataccgaacgtgttccaccctccttatgtctatggggtt 30310047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 157 - 433
Target Start/End: Original strand, 39856843 - 39857120
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttga 256  Q
    |||||||||||| ||||||  ||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||||| | ||||    
T  39856843 caagtttgaattgccccatc-cagag-taagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttctggcagaatcaaacttttga 39856940  T
Q  257 tgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaa 354  Q
    |||||| || |||| ||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  39856941 tgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgtcgtgctcccaaaacatgatcgtcacgttttcgtcgttcgttaa 39857040  T
Q  355 ctccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctc 433  Q
     |||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||| | ||||||||| |||| |||||    
T  39857041 ttccacccaagtggatgatactctcccctcgtcgagcattggacgtttataccgaacatgttccacccttcttgtgtctc 39857120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 185 - 440
Target Start/End: Complemental strand, 49427630 - 49427372
Alignment:
Q  185 aagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgt 284  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| |    
T  49427630 aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaactt 49427531  T
Q  285 tacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccc 382  Q
     ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||    
T  49427530 cacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccgcccaagtgaatgatactctcccc 49427431  T
Q  383 tcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||||||||  |||||| ||||||| |  |||| ||||||  |||||||||||    
T  49427430 tcgtcgagcgttggacatttataccgaacgtgtaacaccatccttgtatctctggggtt 49427372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 185 - 440
Target Start/End: Original strand, 13635260 - 13635518
Alignment:
Q  185 aagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgt 284  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||| | |||||||||| || |||| |||| | |||| |    
T  13635260 aagacaattgttgtggttggaatgcaccttaccctaactaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaaccaactt 13635359  T
Q  285 tacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccc 382  Q
     ||||||||||||||||  ||||||||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||||||||||||||||||||    
T  13635360 cacccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtgacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccc 13635459  T
Q  383 tcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||||| ||||||| | ||||| ||||||| |||||| |||| |||||||    
T  13635460 tcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctttggggtt 13635518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 147 - 440
Target Start/End: Complemental strand, 19160596 - 19160302
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||||||||    
T  19160596 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacaatcttctggcggaatc 19160499  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || | || |||| |||||| | ||||||||||||||||  ||||||||| |||| |||||||||||  |||||||||||||||    
T  19160498 aaacttttgatgatatcttcaattgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgttcccaaaacatagtcgtcacgttttcgt 19160399  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| |||||||||||||||||||||||||||| ||| ||||||||| ||||||| | ||||| ||||||| |||| | ||||||||||||    
T  19160398 cgttcgttaattccacccaagtgaatgatactctccccttgtcaagcgttggacgtttataccaaacgtgttccaccatcctcgtgtctctggggtt 19160302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 21484574 - 21484864
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    |||||||||||||||||||||  ||| || ||| |||||||||||||||||||||||||| |||||||||  ||||||||||||| ||| | |||||||     
T  21484574 gtttggcaagtttgaattaccatatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctacctaatgacgatcttctggtgaaatcaaac 21484671  T
Q  251 tgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 348  Q
    | |||||||||| || |||| ||||||||||||| || |||||||||||||  |||||||||||||||||| |||||||||||||||| |||||||||||    
T  21484672 ttttgatgatatcttcagttgatctcagcaacgtcactcgcatatcgatccactggaacatgttgtgctccaaaaacatgctcgtcacattttcgtcgtt 21484771  T
Q  349 ctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||   || ||||||||||| |||| |||||||    
T  21484772 cgttaattccacccaactgaatgatactctcccctcgtcgagcgttggacgtttataccgaacaagtttcaccctccttgtgtctttggggtt 21484864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 152 - 440
Target Start/End: Original strand, 24270292 - 24270584
Alignment:
Q  152 tttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatcaa 248  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||| |||||  ||||| | | |  ||  || ||| |||||| ||||||||||||    
T  24270292 tttggcaagtttgaattaccccatt-cagagg-aagacaattgttgtagctggaaggtgcattcattcggtacctattgatgatcttctggcggaatcaa 24270389  T
Q  249 attgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcg 346  Q
    | | |||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  24270390 acttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcctaaaacatgctcgtcacgttttcgtcg 24270489  T
Q  347 ttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||| |||| ||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  24270490 ttcgttaattccacccaagtgaatgatactctcccctcatcgagtgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 24270584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 6436050 - 6435757
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||||||||||||||||||| |||| || ||| |||||||||||||||| |||||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  6436050 gtttggcaagtttgaattacctcatt-caaagg-aagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatcttctggcggaatca 6435953  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || | || |||||| |||||| || | |||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  6435952 aacttttgatgatatcttcacttgatctcaacaacgtcactcacatatcgatccactggaacatgttgtgctcccaaaacttgctcgtcacgttttcgtc 6435853  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  6435852 gttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgttttccaccctccttgtgtctctggggtt 6435757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 223 - 440
Target Start/End: Complemental strand, 18170230 - 18170010
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctccc 320  Q
    ||||||||||||| |||||||||||||   |||||||||| || |||| | |||||||| || |||||||||||||||  |||||||||| |||||||||    
T  18170230 taatgacgatcttctggcggaatcaaacctttgatgatatcttcagttgagctcagcaatgtcacccgcatatcgatctactggaacatgatgtgctccc 18170131  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||||||    
T  18170130 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttgaacgtttataccgaacgtgttccac 18170031  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  18170030 cctccttgtgtctctggggtt 18170010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 36909839 - 36909546
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| ||||||| |||||||| |||||  ||||| | | |  ||  ||||||||||||| |||||||||||    
T  36909839 gtttggcaagtttgaattaccccatt-caaagg-aagacaactgttgtagctggaaggtgcattcattctgtacctaatgacgatcttctggcggaatca 36909742  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  36909741 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 36909642  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||| |||| |||||||||||||||||| ||||| | |||||||||||||||||||||  |||||| |||||    
T  36909641 gttcgttaattccacccaagtgaatgatgctcttccctcgtcgagcgttggacgtttacaccgaacgtattccaccctccttatgtctctagggtt 36909546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 38046362 - 38046655
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |  ||  ||||| | | || ||  ||||||||||||| ||| |||||||    
T  38046362 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctaaaaggtgcattcattccgtacctaatgacgatcttctggtggaatca 38046459  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||| |||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  38046460 aacttttgatgatatcttcagttgatctcagcaacgtcaccggcatattgatcgactggaacatgttgtgctcccaaaacatgcttgtcacgttttcgtc 38046559  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  38046560 gttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 38046655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 35586930 - 35587150
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| || | || |||||||||| || ||||||||||||||||  |||||||||||||||||||    
T  35586930 taatgacgatcttctggcggaatcaaacttttgatgatatcttcaattgatctcagcaaggtcacccgcatatcgatccactggaacatgttgtgctccc 35587029  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||| |||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  35587030 aaaacatgttcgtcacgttttcgtcgtttgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 35587129  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  35587130 cctccttgtgtctctggggtt 35587150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 17686362 - 17686582
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| || |||| |||||||| |||| ||||||||||||||||  ||||| |||||||||||||    
T  17686362 taatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagctacgtcacccgcatatcgatccactggaagatgttgtgctccc 17686461  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||| ||||||||||||| ||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| ||    
T  17686462 aaaacatgctcttcacgttttcgtcattcgttaattcaacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttctac 17686561  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  17686562 cctccttgtgtctctggggtt 17686582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 49396982 - 49396689
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |||||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  49396982 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaaggtgcattcattccatacctaatgacgatcttctggcggaatca 49396885  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | ||| |||||| || |||| ||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||     
T  49396884 aacttttgttgatatcttcagttgatctcagcaacgtcacccgcatatcaatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtt 49396785  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| ||||| |||||||||||||||||||||||||  | ||||||| ||||||| ||||||| |||||||||||||  |||| |||||||    
T  49396784 gttcgttaattccactcaagtgaatgatactctcccctcgtaaatcgttggacgtttataccgaacgtgttccaccctccttatgtctatggggtt 49396689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 151 - 402
Target Start/End: Complemental strand, 37778357 - 37778103
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||||  ||||  ||||| | | |  ||  ||||||||||||| |||||||||||    
T  37778357 gtttggcaagtttgaattaccccatt-cagagg-aagaaaattgttgtaggcggaaggtgcattcattcggtacctaatgacgatcttctggcggaatca 37778260  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||    
T  37778259 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatcaactggaacatgttgttctcccaaaacatgctcgtcacgttttcgtc 37778160  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgttt 402  Q
    || |||||| |||||||||||||||||||||||||||||||| |||||||| |||||    
T  37778159 gtcctttaattccacccaagtgaatgatactctcccctcgtcaagcgttggttgttt 37778103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 23342919 - 23342626
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||| ||| || ||| |||||||||||||||| |||||  ||||| | | |  ||  ||||||||||||| ||| |||||||    
T  23342919 gtttggcaagtttgaattacccaatt-caaagg-aagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatcttctggaggaatca 23342822  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||||||||||||||||||||  | ||||||  |||||||| |||||||||||||||||||||||||    
T  23342821 aacttttgatgatatcttcagtttatctcagcaacgttacccgcatatcgatccactcgaacataatgtgctccaaaaacatgctcgtcacgttttcgtc 23342722  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| || ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || |||| |||||| |||| |||||||    
T  23342721 gttcgttaattcaacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgtttcaccttccttgtgtctttggggtt 23342626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 49926381 - 49926600
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| ||| ||||||||||||  |||||||||||||||||||    
T  49926381 taatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacctgcatatcgatccactggaacatgttgtgctccc 49926480  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||| ||||||||||||||||| |||| ||| | ||||||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  49926481 aaaacatgctcctcacgttttcgtcgttcgttaattccgcacaagtgaatgacactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 49926580  T
Q  420 cctccttgcgtctctggggtt 440  Q
    || ||||  ||||||||||||    
T  49926581 cc-ccttctgtctctggggtt 49926600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 146 - 436
Target Start/End: Complemental strand, 17697326 - 17697035
Alignment:
Q  146 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat--cttaccctaattaatgacgatcttttggcg 241  Q
    |||| ||||| |||||||||||||||||  || | ||| ||||||| ||||||||||||||  |||||  ||||||     |||| |||||||| |||||    
T  17697326 ttgtcgtttgacaagtttgaattacccccatttaaagg-aagacaactgttgtagttggaaggtgcattccttacc-----taatcacgatcttctggcg 17697233  T
Q  242 gaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgtt 339  Q
    |||||| | | ||||| |||| || |||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  17697232 gaatcagactcttgataatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgtt 17697133  T
Q  340 ttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctgg 436  Q
    |||||||| ||||||||||||||||||||||||||| || |||| ||||||| ||||| ||||||| | ||||| |||||||||||||  ||||||||    
T  17697132 ttcgtcgtactttaactccacccaagtgaatgataccctacccttgtcgagcattggacgtttataccaaacgtgttccaccctccttatgtctctgg 17697035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 157 - 425
Target Start/End: Complemental strand, 13283973 - 13283705
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgtt 254  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||  |||||  |   |||  |||| |||||||| ||||||||||| | ||||    
T  13283973 caagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaaggtgcattct---ctacctaatcacgatcttctggcggaatcagactgtt 13283879  T
Q  255 gatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcttt 352  Q
    ||| |||| || |||| ||||||||||||||||| ||||||||||||  | ||||||| || ||||||||||||||||||||| |||||| |||||| ||    
T  13283878 gataatatattcagttgatctcagcaacgttacctgcatatcgatccactagaacatgctgcgctcccaaaacatgctcgtcatgttttcatcgttcgtt 13283779  T
Q  353 aactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || | ||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  13283778 aatttcacccaactaaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtattccaccctcct 13283705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 217 - 432
Target Start/End: Complemental strand, 48215409 - 48215191
Alignment:
Q  217 cctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgt 314  Q
    ||||| ||||||| ||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||    
T  48215409 cctaactaatgactatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgt 48215310  T
Q  315 gctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgta 413  Q
    ||||| |||| |||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||     
T  48215309 gctccaaaaatatgctcgtcatgttttcgtcgttcgttaattccactcaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtg 48215210  T
Q  414 ttccaccctccttgcgtct 432  Q
    ||||||| |||||| ||||    
T  48215209 ttccaccatccttgtgtct 48215191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 41780971 - 41780678
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| || ||  ||||| | | || ||  ||||||||| ||| ||||| |||||    
T  41780971 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctgcaaggtgcattcattccgtacctaatgacgaacttctggcgaaatca 41780874  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| |||| |||||||| ||| ||||||| |||  |||||||||| ||||||||||||| ||  ||||||||||||||||    
T  41780873 aacttttgatgatatattcagttgatcttagcaacgtcacctgcatatctatctactggaacatgctgtgctcccaaaatatattcgtcacgttttcgtc 41780774  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| ||||||||||||||||||| | ||| |||||||||||||||| ||||||| ||||||| ||||||||| |||| ||||||||||||    
T  41780773 gttcgttaattccacccaagtgaatgatattatcctctcgtcgagcgttggacgtttataccgaacgtgttccacccttcttgtgtctctggggtt 41780678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 223 - 438
Target Start/End: Complemental strand, 35185176 - 35184957
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| || | || || |||||||||| ||| ||||||||||||  |||||||||  ||||||||    
T  35185176 taatgacgatcttctggcggaatcaaacttttgatgatatcttcaattgatttcagcaacgtcacctgcatatcgatccactggaacatgccgtgctccc 35185077  T
Q  321 -aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattcca 418  Q
     |||||||| |||||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  35185076 caaaacatgttcgtcacgttttcgtcgttcgttaattccatcaaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttcca 35184977  T
Q  419 ccctccttgcgtctctgggg 438  Q
    ||||||||| |||| |||||    
T  35184976 ccctccttgtgtctttgggg 35184957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 229 - 440
Target Start/End: Complemental strand, 18842638 - 18842424
Alignment:
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| |||||| |||| | | ||||  |||| || |||| ||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||    
T  18842638 cgatcttctggcgggatcagactcttgacaatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgccgtgctcccaaaaca 18842539  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    ||||||||||||||||||||||| |||| ||||||||| | ||||||| ||| ||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  18842538 tgctcgtcacgttttcgtcgttcgttaattccacccaactaaatgatattcttccctcatcgagcgttggacgtttataccgaacgtattccaccctcct 18842439  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||| ||||||    
T  18842438 tgtgtctccggggtt 18842424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 184 - 440
Target Start/End: Complemental strand, 5765449 - 5765191
Alignment:
Q  184 taagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaa 281  Q
    |||||||||||||||||||||||  |||||    |||||  |||| |||||||| ||||||||||| |  |||||| |||| || | || ||||||||||    
T  5765449 taagacaattgttgtagttggaaggtgcatt---ccctacctaatcacgatcttctggcggaatcagacggttgataatatcttcatttgatctcagcaa 5765353  T
Q  282 cgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctc 379  Q
    ||||||||||||||||||||  | ||||||||| |||||||||||||||||| ||| ||||| ||||||| |||| ||||||||| ||||||||| |||     
T  5765352 cgttacccgcatatcgatccactagaacatgttctgctcccaaaacatgctcatcaagtttttgtcgttcgttaattccacccaactgaatgatattctt 5765253  T
Q  380 ccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    || ||||||||||||||| ||||||| ||||||||||||||||||||||  |||| ||||||    
T  5765252 ccatcgtcgagcgttggacgtttataccgaacgtattccaccctccttgtatctccggggtt 5765191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 239 - 440
Target Start/End: Original strand, 35526194 - 35526398
Alignment:
Q  239 gcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcac 336  Q
    ||||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||  || |||||  ||||||||||||||||| ||||| |    
T  35526194 gcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactgcaacattctgtgctcccaaaacatggtcgtctc 35526293  T
Q  337 gttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctg 435  Q
    ||||||| ||||| |||| |||||||| ||||||||||||||| ||||||||||||||||| ||||||| ||||||  ||||||||||| || ||||| |    
T  35526294 gttttcgacgttcgttaattccacccaggtgaatgatactctctcctcgtcgagcgttggacgtttataccgaacgcgttccaccctccctgtgtctccg 35526393  T
Q  436 gggtt 440  Q
    |||||    
T  35526394 gggtt 35526398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 157 - 440
Target Start/End: Complemental strand, 17372996 - 17372712
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttga 256  Q
    ||||||||||||||| |||| || ||| |||||||||||||||||||||| |    || || ||  ||||||||||||| ||||| ||| ||| | | ||    
T  17372996 caagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaaggtgcatttccatacctaatgacgatcttctggcgaaattaaactttcga 17372899  T
Q  257 tgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaa 354  Q
    |||||| || |||| |||||| ||||||||| || ||||||||||  ||||| ||| ||||||||||||||||| || |||| ||||||||||||  |||    
T  17372898 tgatatcttcagttgatctcatcaacgttacacgtatatcgatccactggaatatggtgtgctcccaaaacatgttcttcacattttcgtcgttcgctaa 17372799  T
Q  355 ctccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||||| ||||| || ||| |||||||||||||||||||||| ||||||| ||||| |||| ||||||| ||||||||||||||||    
T  17372798 ttccacctaagtggattatattctcccctcgtcgagcgttggacgtttataccgaacatatttcaccctctttgcgtctctggggtt 17372712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 157 - 422
Target Start/End: Original strand, 24363738 - 24364003
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgtt 254  Q
    ||||||||||||||| |||| || ||| ||||||||||||||||||||||  |||||    |||||  |||| |||||||| |  |||||||||| | ||    
T  24363738 caagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaaggtgcatt---ccctacctaatcacgatcttctaacggaatcaaactctt 24363832  T
Q  255 gatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcttt 352  Q
    ||| |||| || ||||  ||||| |||||||| ||||||||||||||  | ||||||  ||||| ||||||||||| || ||||||||||||||||| ||    
T  24363833 gataatatcttcagttgctctcaacaacgttaaccgcatatcgatccactagaacatactgtgcccccaaaacatgttcttcacgttttcgtcgttcatt 24363932  T
Q  353 aactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccct 422  Q
    || || |||||||||| ||||| |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  24363933 aattctacccaagtgattgatattctcccctcgtcgagcgttggacgtttataccgaacgtattccaccct 24364003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 108 - 301
Target Start/End: Original strand, 29707424 - 29707620
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaaga---caattgttgtagttgg 204  Q
    ||||||||||||||| |  | ||||||||||||| || |    ||||||||||||||||||||||||||||||||||||||   ||||||||| |||||     
T  29707424 aaggaaaaacatgaatgccgagcgaaatgcttgagtcctgaccgtttggcaagtttgaattaccccatttcagaggtaagaagacaattgttgcagttgt 29707523  T
Q  205 aatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc 301  Q
    |||||| ||| |||||| | ||||||||||| | ||||||||||| | |||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  29707524 aatgcaccttgccctaacttatgacgatcttctagcggaatcaaacttttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatcc 29707620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 172 - 433
Target Start/End: Original strand, 16532042 - 16532304
Alignment:
Q  172 ccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagt 269  Q
    ||||||||| |||||||||||||||||||||||||  |||||    || ||  |||| |||||||| | ||| ||||| | | ||||| |||| || |||    
T  16532042 ccatttcag-ggtaagacaattgttgtagttggaagatgcatt---ccatacctaatcacgatcttctagcgaaatcagactattgataatatcttcagt 16532137  T
Q  270 taatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtg 367  Q
    | |||||||||||||||| |||||||| ||||  | || |||| | |||||||| || |||||| |||| |||||||||||| |||| ||||||||| |     
T  16532138 tgatctcagcaacgttacacgcatatcaatccattagagcatgctctgctcccataatatgctcatcacattttcgtcgttcgttaattccacccaactt 16532237  T
Q  368 aatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctc 433  Q
    ||||||| |||| |||| |||||||||| | ||||||| ||||||||||||| |||||||| |||||    
T  16532238 aatgatattctctcctcatcgagcgttgtacgtttatatcgaacgtattccatcctccttgtgtctc 16532304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 276 - 416
Target Start/End: Complemental strand, 16081437 - 16081294
Alignment:
Q  276 cagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgat 373  Q
    |||||||||||| ||||||||||||  || |||||||||||||||| ||||||||||| ||| ||| ||||||||| |||| |||||| || ||||||||    
T  16081437 cagcaacgttacacgcatatcgatcaactagaacatgttgtgctccaaaaacatgctcctcatgttatcgtcgttcgttaattccacctaactgaatgat 16081338  T
Q  374 actctcccctcgtcgagcgttggatgtttata-cgaacgtattc 416  Q
    |  ||||||||||||||||||| | ||||||| |||||||||||    
T  16081337 atcctcccctcgtcgagcgttgaacgtttataccgaacgtattc 16081294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 301 - 380
Target Start/End: Complemental strand, 13148444 - 13148365
Alignment:
Q  301 ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcc 380  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||| |||| |||||||||||||||||||||||||    
T  13148444 ctggaacatgttgtgctctcaaaacatgttcttcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcc 13148365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 22527786 - 22527686
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| |||||| |||||| ||||| ||||    
T  22527786 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgatgatcttctggcgaaatc 22527689  T
Q  247 aaa 249  Q
    |||    
T  22527688 aaa 22527686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 47487796 - 47487695
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  ||||||||||||||| || | ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  47487796 aaggaaaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaa 47487699  T
Q  207 tgca 210  Q
    ||||    
T  47487698 tgca 47487695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 27035073 - 27034976
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| |  ||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  27035073 aaaacatgaatgccgggtgaaatgcttgagtcat-gttgtttggcaagtttgaatttaccccatttcaaaggtaagacaattattgtagttggaatgca 27034976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 108 - 208
Target Start/End: Original strand, 3658919 - 3659018
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| || ||||||||||||||| || | ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||    
T  3658919 aaggaaaaacatgaatgtcgggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttgtaa 3659016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 30309587 - 30309491
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| | |||| ||||||||||| |||| ||||||||||| ||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  30309587 aaaacatgaatgatgggtgaaatgcttgagtcat-gttgtttggcaggtttgaatttaccccatt-cacaggtaagacaattgttgtagttggaatgca 30309491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 51270252 - 51270348
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| | |||| |||||| |||| || ||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  51270252 aaaacatgaatgctgggtgaaatgtttgagtc-ttgttgtttggcaagtttgaattgacccca-ttcaaaggtaagacaattgttgtagttggaatgca 51270348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 45689566 - 45689667
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  ||||||||||||||| || | ||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| ||||    
T  45689566 aaggaaaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttagcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagtaggaa 45689663  T
Q  207 tgca 210  Q
    ||||    
T  45689664 tgca 45689667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 46180039 - 46179938
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||| ||||||  ||||||||||||||| |||| |||||||||| |||||||||| ||| |||| || ||||||||||||||||||||||| ||    
T  46180039 aaggaaaaacgtgaacgcggggcgaaatgcttgagtcat-gttgtttggccagtttgaatttacctcatt-caaaggtaagacaattgttgtagttgaaa 46179942  T
Q  207 tgca 210  Q
    ||||    
T  46179941 tgca 46179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 49262756 - 49262655
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||| |||||||||| |  ||||||||||||||| || | ||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||||    
T  49262756 aagggaaaacatgaatgcggggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattcttgtagttggaa 49262659  T
Q  207 tgca 210  Q
    ||||    
T  49262658 tgca 49262655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 50068015 - 50067917
Alignment:
Q  111 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||| |  |||| |||||||||| || | |||||||||||||||||||||  |||  |||| ||||||||||||||||||||||||||||||    
T  50068015 gaaaaacatgaatgaggggcaaaatgcttgagtcct-gttgtttggcaagtttgaatttgccccattcaaaggtaagacaattgttgtagttggaatgca 50067917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 29707293 - 29707197
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| |  ||| ||||||||||| |||| ||||||| ||||||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  29707293 aaaacatgaatggcgggtgaaatgcttgagtcat-gttgtttagcaagtttgaattgaccccatt-caaaggtaagacaattgttgtagttggaatgca 29707197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 40533287 - 40533365
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc 301  Q
    ||||||||||||| ||||||||| ||| | |||||||||| || |||| ||||| ||||||||||||||||||||||||    
T  40533287 taatgacgatcttctggcggaattaaacttttgatgatatcttcagttgatctcggcaacgttacccgcatatcgatcc 40533365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 433
Target Start/End: Original strand, 16098078 - 16098146
Alignment:
Q  366 tgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctc 433  Q
    ||||||||| |||||| ||||||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  16098078 tgaatgatattctcccatcgtcgagcgttggacgtttataccgaacgtattccaccctccttgtgtctc 16098146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 12791033 - 12790936
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| || ||||||||| ||||| || | ||||||||| ||||||||||| |||||||| ||||||||| |||||||||| ||||||||    
T  12791033 aaggaaaaacatgaatgtcgggcgaaattcttgagtcct-gttgtttggtaagtttgaatttaccccatt-cagaggtaacacaattgttggagttggaa 12790936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 17697466 - 17697563
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||| || || ||||||||||||||| ||| ||||||||||| |||||||| ||| |||| ||||| || ||||||||||||||||||||||    
T  17697466 aaggaaaaacataaatgtcgggcgaaatgcttgagtca-tgttgtttggcgagtttgaatttatccca-ttcaggggcaagacaattgttgtagttggaa 17697563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 18170472 - 18170569
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||| || |||||  |||||||||| |||| || |||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  18170472 aaggaaaagcaagaacgccgggcgaaatgtttgagtc-ttgttgtttggccagtttgaatttacccca-ttcagaggtaacacaattgttgtagttggaa 18170569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 41874622 - 41874544
Alignment:
Q  131 gaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||||| |||| ||||||| |||||||||||||  | |  |||| ||||||||||||||||||||||||||||||    
T  41874622 gaaatgcttgagtcat-gttgtttagcaagtttgaatttgctccattcaaaggtaagacaattgttgtagttggaatgca 41874544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 16081766 - 16081827
Alignment:
Q  146 ttgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||| |||| |||||||| ||||||||| |||||||||| |||||||||||||||||    
T  16081766 ttgttgtttcgcaaatttgaatttaccccattttagaggtaagataattgttgtagttggaa 16081827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 18170668 - 18170728
Alignment:
Q  146 ttgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  18170668 ttgttgtttggccagtttgaatttacccca-ttcagaggtaacacaattgttgtagttggaa 18170728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 39223952 - 39223857
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||| || |||||||||  |||||| || | ||||||||||||||||||||||||||||    
T  39223952 aaaacatgaatgccgggtgaaatgcttgagtcat-gttgtttgacaggtttgaatttacccatt-caaatgtaagacaattgttgtagttggaatgca 39223857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 48568160 - 48568064
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||  ||||||||||||  ||   |||| ||||||||||||||||||||||||||||||    
T  48568160 aaaacatgaatgccgggtgaaatgcttgattcat-gttgtttcacaagtttgaatttgcctcattcaaaggtaagacaattgttgtagttggaatgca 48568064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 49598646 - 49598546
Alignment:
Q  112 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaa---ttgttgtagttggaat 207  Q
    |||||||| ||||  ||||||||||||||| |||| |||||||||| |||||||||| ||| |||| || |||||||||||   ||||||||||||||||    
T  49598646 aaaaacataaacgcggggcgaaatgcttgagtcat-gttgtttggccagtttgaatttacctcatt-caaaggtaagacaacaattgttgtagttggaat 49598549  T
Q  208 gca 210  Q
    |||    
T  49598548 gca 49598546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 38044671 - 38044612
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||| |||||||||||||  |||| ||||| ||||||| |||||||||||||||||    
T  38044671 tgttgtttagcaagtttgaatttgcccaattcagtggtaagataattgttgtagttggaa 38044612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Original strand, 16098022 - 16098063
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgta 199  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  16098022 caagtttgaattaccccatttcaga-gtaagacaattgttgta 16098063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 18842937 - 18842994
Alignment:
Q  147 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  18842937 tgttgtttagcaagtttgaatttacccca-ttcaggggtaagacaattgttgtagttgg 18842994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 42571496 - 42571442
Alignment:
Q  149 ttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttg 203  Q
    ||||||||||||||||||||  |||| |||| |||||| ||||||||||||||||    
T  42571496 ttgtttggcaagtttgaatttacccaattcaaaggtaacacaattgttgtagttg 42571442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 44337075 - 44336979
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| |  ||||||||||| ||| |||| ||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||||||    
T  44337075 aaaacatgaatgccgggcgaaatgcgtgactcat-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaatgca 44336979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 376 - 440
Target Start/End: Complemental strand, 15471568 - 15471503
Alignment:
Q  376 tctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||||||| ||||||||||| ||| | |||||||||||| ||||||| ||||| ||||||    
T  15471568 tctcccctcgtcgaacgttggatgttcataccaaacgtattccacactccttgtgtctccggggtt 15471503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 24363531 - 24363475
Alignment:
Q  150 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  24363531 tgtttagcaagtttgaatttaccccatt-cagagataagacaattgttgtagttggaa 24363475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 21484499 - 21484436
Alignment:
Q  147 tgttgtttggcaagtttgaattaccc-catttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||||||| ||||||||  || ||||| | ||||||||||||||||||||||||||||||    
T  21484499 tgttgtttggcaattttgaatttgcctcatttaa-aggtaagacaattgttgtagttggaatgca 21484436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 14772462 - 14772517
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||| |||||||||||||| | ||||| |||||||| |||||| ||||||||||||    
T  14772462 gtttagcaagtttgaattatctcattttagaggtaacacaattcttgtagttggaa 14772517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 48226799 - 48226760
Alignment:
Q  188 acaattgttgtagttggaatgcatcttaccctaattaatg 227  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  48226799 acaattgttgtagttggaatgcaccttaccctaactaatg 48226760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 17686074 - 17686021
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||    
T  17686074 ttggcaagtttgaatttacctcatt-cagaggtaacacaattgttgtagttggaa 17686021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 29436423 - 29436519
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| || | ||||||||||||| || | ||| ||||||| ||||||||| | | |||| || |||||| |||||||||||||||||||||||    
T  29436423 aaaacatgaatgtcgagcgaaatgcttgagtcct-gttatttggcaggtttgaatttatctcatt-caaaggtaaaacaattgttgtagttggaatgca 29436519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 37778569 - 37778622
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||| ||| |||| ||||||||| |||||||||||||||||||    
T  37778569 ttggcaagtttgaatttaccacatt-cagaggtaacacaattgttgtagttggaa 37778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 440
Target Start/End: Original strand, 46181739 - 46181773
Alignment:
Q  406 cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||||| |||||||||||||||||||    
T  46181739 cgaacgtattccaccttccttgcgtctctggggtt 46181773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 12790749 - 12790693
Alignment:
Q  150 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| ||||||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  12790749 tgtttagcaagtttgaatttaccccattt-agaggtaagataattgttgcagttggaa 12790693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 13973524 - 13973481
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagtt 202  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  13973524 caagtttgaattacccca-ttcagagg-aagacaattgttgtagtt 13973481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 17685835 - 17685779
Alignment:
Q  150 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| ||||||||||||| | |||||| ||||||||||| |||||||||||||||||    
T  17685835 tgtttagcaagtttgaatttatcccatt-cagaggtaagataattgttgtagttggaa 17685779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 6436262 - 6436313
Alignment:
Q  153 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  6436262 ttggcaagtttgaatttacccca-ttcaaaggtaaaacaattgttgtagttgg 6436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 12790879 - 12790925
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 205  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  12790879 caagtttgaattaccccattt-agagg-aagacaattgttgcagttgga 12790925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 13284188 - 13284244
Alignment:
Q  150 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| |||||||||||||  |||  ||||  |||||||||||||||||||||||||    
T  13284188 tgtttagcaagtttgaatttgccccattcaagggtaagacaattgttgtagttggaa 13284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 22527951 - 22528053
Alignment:
Q  108 aaggaaaaacatgaac-gttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgga 205  Q
    |||| ||||||||||  ||| |||||||| ||||| || ||||||||| ||| ||||||||| | | |||| || |||||| ||||||||||||||||||    
T  22527951 aagggaaaacatgaagtgtttggcgaaattcttgagtc-ttgttgttttgcaggtttgaatttatctcatt-caaaggtaacacaattgttgtagttgga 22528048  T
Q  206 atgca 210  Q
    |||||    
T  22528049 atgca 22528053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 23343130 - 23343181
Alignment:
Q  153 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  23343130 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttgg 23343181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 24269842 - 24269786
Alignment:
Q  150 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| |||||||||||||  |||| |||| |||||||| |||||||| ||||||||    
T  24269842 tgtttagcaagtttgaatttgcccaattcaaaggtaagataattgttgaagttggaa 24269786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 38044798 - 38044844
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 205  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  38044798 caagtttgaattacccca-ttcagagg-aagacaattgttgcagttgga 38044844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 38044908 - 38044857
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||||||||| |||||||| || |||||| |||||||||||||||||    
T  38044908 ttggcaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttgg 38044857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 40532892 - 40532938
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 205  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  40532892 caagtttgaattacctcattt-agagg-aagacaattgttgtagttgga 40532938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 225; Significance: 1e-124; HSPs: 2)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 2589 - 2254
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    |||||||||||||||| ||||||||||||||||| |||| |  |||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  2589 aaggaaaaacatgaacattgggcgaaatgcttgagtcatggccgtttggtaattttgaattaccccatttcagaggtaagacaattgttgtagttggaat 2490  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||||||||||||||||  |||||||||||| || | || |||||| ||||||||||||||||||||||  |||||    
T  2489 gcaccttaccctaactaatgacgatcttttggcggaatcaagctgttgatgatatcttcaattgatctcatcaacgttacccgcatatcgatccactgga 2390  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  2389 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgttgagcgttggacgtttata 2290  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||| |||||||||||||| ||||| ||||||    
T  2289 ccgaacgtgttccaccctccttgtgtctccggggtt 2254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 4805 - 4834
Alignment:
Q  181 aggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||||||||||||||||||||||||    
T  4805 aggtaagacaattgttgtagttggaatgca 4834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 19400682 - 19400347
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    |||||||| |||||| |||||||||||||||||| |||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19400682 aaggaaaatcatgaatgttgggcgaaatgcttgagtcatggtcgtttggcaaatttgaattaccccatttcagaggtaagacaattgttgtagttggaat 19400583  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| |||||||||| || |||||||||||| ||||||||||||| || |||| |||||| |||||| |||||||||||||||  |||||    
T  19400582 gcaccttaccctaactaatgacgatattctggcggaatcaagttgttgatgatatcttcagttgatctcaccaacgtcacccgcatatcgatccactgga 19400483  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||| |||||||    
T  19400482 acatgctgtgctcccaaaacatgctcgtcacattttcgtcgttcgttaattccacccaagtgaatgacactctcccctcatcgagcgttggacgtttata 19400383  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||||||||||| |||||| ||||||||||||    
T  19400382 ccgaacgtattccaccatccttgtgtctctggggtt 19400347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 1971684 - 1971349
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| | |||||||||||||||| |||| |   |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1971684 aaggaaaaacatgaaagctgggcgaaatgcttgagtcatggccatttggcaagtttgaattaccccatttcagaggcaagacaattgttgtagttggaat 1971585  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||| ||| |||||| ||| || ||||||||||||  |||||||||||| || |||| |||||||||||||||||||||||| ||||  |||||    
T  1971584 gcaccttaccataactaatgatgattttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatattgatccactgga 1971485  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  1971484 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccaccgaagtgaatgatactctcccctcgtcgagcgttggacgtttata 1971385  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     | ||||| |||||||||||||| ||||| ||||||    
T  1971384 ccaaacgtgttccaccctccttgtgtctccggggtt 1971349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 3601660 - 3601325
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| ||||||||||| |||| |||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3601660 aaggaaaaacatgaacgctgggcgaaatgtttgagtcatggccatttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 3601561  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcg--atcctgga 305  Q
    ||| ||||| |||| ||||||||||||| || |||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||  |  |||||    
T  3601560 gcaccttactctaactaatgacgatcttctgacggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgaaacactgga 3601461  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3601460 acatgttgtgctcttaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttata 3601361  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||  | ||| |||||||||| ||||||||||||    
T  3601360 ccgaatatgttctaccctccttgtgtctctggggtt 3601325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 129 - 440
Target Start/End: Original strand, 7141 - 7452
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    |||||||||| || |||| |||||||| ||| |||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  7141 gcgaaatgctcgagtcat-gttgtttgacaaatttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 7237  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||    
T  7238 cgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 7337  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||| ||||    
T  7338 tgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatcct 7437  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  7438 tgtgtctctggggtt 7452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 129 - 440
Target Start/End: Original strand, 8576053 - 8576364
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    |||||||||| || || |||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  8576053 gcgaaatgctcgagtc-ttgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 8576149  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcct--ggaacatgttgtgctcccaaaaca 326  Q
    | ||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||   ||||||||||||||||||||||||    
T  8576150 caatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccaccggaacatgttgtgctcccaaaaca 8576249  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || ||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||| ||||    
T  8576250 tggtcgtcacgttttcttcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatcct 8576349  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  8576350 tgtgtctctggggtt 8576364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 183 - 440
Target Start/End: Original strand, 541598 - 541858
Alignment:
Q  183 gtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaac 282  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||||||||||| ||||| |||||| ||||||||||||| |  |||| |||||||||||    
T  541598 gtaagacaattgttgcagttggaatgcaccttaccctaactaatgacgatcttctggcgaaatcaagttgttgatgatatctccagttgatctcagcaac 541697  T
Q  283 gttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcc 380  Q
    || ||||||||||||||||  ||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||    
T  541698 gtcacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcccgttttcgtcgttcgttaattccacccaagtgaatgatactctcc 541797  T
Q  381 cctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||||||| ||||||| |||| || |||||||||||||| ||||||||||||    
T  541798 cctcgtcgagcgttggacgtttataccgaaggtgttccaccctccttgtgtctctggggtt 541858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 8538271 - 8537938
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | |||||||||| || || | ||||||||||| ||||||||| | | |||| || ||| ||||||||||||||||||||||    
T  8538271 aaggaaaaacatgaatgccgagcgaaatgctcgagtcct-gttgtttggcaggtttgaatttatctcatt-caaagg-aagacaattgttgtagttggaa 8538175  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||||||| ||||||||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  |||    
T  8538174 tgcaccttaccctaactaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactgg 8538075  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||||    
T  8538074 aacatgttgtgctcccaaaacatgctcgtcatgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttgaacgtttat 8537975  T
Q  405 a-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | ||||||| ||||||| |||||| ||||||||||||    
T  8537974 accgaacgtgttccaccatccttgtgtctctggggtt 8537938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 147 - 440
Target Start/End: Original strand, 27661306 - 27661600
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||||||||    
T  27661306 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacaatcttctggcggaatc 27661403  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| ||||||| |||| |||||| | ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||    
T  27661404 aaacttttgatgatatctttagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtcacgttttcgt 27661503  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||||||  |||| ||||||||  ||||| ||||||| |||||| ||||||||||||    
T  27661504 cgttcgttaattccacccaagtaaatgatactctcccctcgtcgagcaatggaagtttatactaaacgtgttccaccatccttgtgtctctggggtt 27661600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 11347026 - 11346693
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | |||||||||| || || | ||||||||||| ||||||||| | | |||| || ||| ||||||||||||||||||||||    
T  11347026 aaggaaaaacatgaatgccgagcgaaatgctcgagtcct-gttgtttggcaggtttgaatttatctcatt-caaagg-aagacaattgttgtagttggaa 11346930  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||||||| ||||||||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | || |||||||||||||  |||    
T  11346929 tgcaccttaccctaactaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcactcgcatatcgatccactgg 11346830  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  11346829 aacatgctgtgctcccaaaacatgctcgtcacgttttcgtcgttcattaatttcacccaagtgaatgatactctcccctcgtcgagcgttggacgtttat 11346730  T
Q  405 a-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | | ||||| ||||||| |||||| ||||||||||||    
T  11346729 accaaacgtgttccaccatccttgtgtctctggggtt 11346693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 147 - 440
Target Start/End: Complemental strand, 28881269 - 28880975
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||  |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  28881269 tgttgtttgacaagtttgaattaccccatt-caaaga-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttgtggcggaatc 28881172  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||    
T  28881171 aaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttcgt 28881072  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||||||||||| |||| || | || || ||||||| |||||| ||||||||||||    
T  28881071 cgttcgttaattccacccaactgaatgatactctcccctcgtcgagcgttggacgtttgtaccaaatgttttccaccatccttgtgtctctggggtt 28880975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 129 - 440
Target Start/End: Original strand, 19036586 - 19036897
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  19036586 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 19036682  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  |||||||||||||||||||||||||    
T  19036683 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaaca 19036782  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  19036783 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 19036882  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  19036883 tgtgtctctggggtt 19036897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 212 - 440
Target Start/End: Complemental strand, 40009743 - 40009512
Alignment:
Q  212 cttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacat 309  Q
    |||||||||| ||||||||||||| | | ||||||||  |||||||||| | || |||| |||||| ||||||||||| |||||||||||  || |||||    
T  40009743 cttaccctaactaatgacgatcttcttgtggaatcaagctgttgatgatgtcttcagttgatctcaacaacgttacccacatatcgatccactgtaacat 40009644  T
Q  310 gttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cga 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  40009643 gttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccga 40009544  T
Q  409 acgtattccaccctccttgcgtctctggggtt 440  Q
    |||||||||||||||||||||||||| |||||    
T  40009543 acgtattccaccctccttgcgtctctagggtt 40009512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 18308537 - 18308244
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |||||  ||||| | | || ||  ||||| | ||||  |||||||||||    
T  18308537 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtaggtggaaggtgcattcattccatacctaatgtcaatctactggcggaatca 18308440  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    |||| |||||||||| || |||| ||||||||||| | ||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||    
T  18308439 aatttttgatgatatcttcagttgatctcagcaacatcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcatgttttcgtc 18308340  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  18308339 gttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 18308244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 157 - 440
Target Start/End: Complemental strand, 11028045 - 11027761
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttga 256  Q
    |||||||||||| ||||||  ||| ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| ||||||||||||| | | ||    
T  11028045 caagtttgaattgccccatc-cag-ggtaagacaattgttgtggttggaatgcaccttaccctaactaatgacgatcttctggcggaatcaaactttcga 11027948  T
Q  257 tgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaa 354  Q
    |||||| || |||| |||| | |||| | ||||||||||||||||  ||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||    
T  11027947 tgatatcttcagttgatctaaccaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtgacgttttcgtcgttcgttaa 11027848  T
Q  355 ctccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||| |||||| |||| |||||||    
T  11027847 ttccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctttggggtt 11027761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 1400232 - 1400525
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||||||||||||||||||||||||  | | | |||||||||||||||| |||||  ||||| |   || ||  ||||||||||||| |||||||||||    
T  1400232 gtttggcaagtttgaattaccccatt--aaaaggaagacaattgttgtagctggaaggtgcattcactccgtacctaatgacgatcttctggcggaatca 1400329  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| |||||||||| |||||  ||||||||| ||||||||||||||||| ||||||||||||||||    
T  1400330 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatggatccactggaacatgatgtgctcccaaaacatggtcgtcacgttttcgtc 1400429  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||| ||||||    
T  1400430 gttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctccggggtt 1400525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 185 - 440
Target Start/End: Complemental strand, 30709840 - 30709582
Alignment:
Q  185 aagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgt 284  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||  |||||||||||| | |||||||||| || |||| |||| | |||| |    
T  30709840 aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttccggcggaatcaaacttttgatgatatcttcagttgatctaaccaactt 30709741  T
Q  285 tacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccc 382  Q
     ||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  30709740 cacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttcgtcattcgttaattccacccaagtgaatgatactctcccc 30709641  T
Q  383 tcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||||| ||||||| | ||||| ||||||| ||||||  ||| |||||||    
T  30709640 tcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtatctttggggtt 30709582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 4724004 - 4724297
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| || ||  ||||| | |    ||  ||||||||||||| |||||||||||    
T  4724004 gtttggcaagtttgaattaccccatt-cagagg-aagacaattgttgtagctgcaaggtgcattcatttggtacctaatgacgatcttctggcggaatca 4724101  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||    
T  4724102 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgtttttgtc 4724201  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||| || ||||||  |||||| ||||||||||||    
T  4724202 gttcgttaattccacccaagtgaatgatactctcccctcatcgagcgttggacgtttataccgaatgtgttccactttccttgtgtctctggggtt 4724297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 38854474 - 38854142
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | |||||||||| || |||| ||||||||||| ||||||||| | | |||| || ||| |||||||||||||| |||||||    
T  38854474 aaggaaaaacatgaatgccgagcgaaatgctcgagtcat-gttgtttggcaggtttgaattgatctcatt-caaagg-aagacaattgttgtggttggaa 38854378  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||| ||| |||||||| |||| ||||||||||||| | |||||||||| || |||| |||| | |||| | ||||||||||||||||  |||    
T  38854377 tgcaccttacc-taactaatgacggtcttctggcggaatcaaacttttgatgatatcttcagttgatctaaccaacttcacccgcatatcgatccactgg 38854279  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  38854278 aacatgatgtgctcccaaaacatggtcgtgacgttttcgtcgttcgttaattccacccaattgaatgatactctcccctcgtcgagcgttggacgtttat 38854179  T
Q  405 a-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | | ||||| ||||||| |||||| |||| |||||||    
T  38854178 accaaacgtgttccaccatccttgtgtctttggggtt 38854142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 230 - 440
Target Start/End: Complemental strand, 33370851 - 33370638
Alignment:
Q  230 gatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacat 327  Q
    |||||| ||||||||||| | ||||||| |||| || |||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  33370851 gatcttctggcggaatcagactgttgataatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacat 33370752  T
Q  328 gctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcctt 426  Q
    |||||||||||||||||||||| |||| ||||||||| | ||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  33370751 gctcgtcacgttttcgtcgttcgttaattccacccaactaaatgatattctcccctcgtcgagcgttgaacgtttatatcgaacgtattccaccctcctt 33370652  T
Q  427 gcgtctctggggtt 440  Q
    | ||||| ||||||    
T  33370651 gtgtctccggggtt 33370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 223 - 440
Target Start/End: Complemental strand, 35565475 - 35565256
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| |  ||||||||| ||||||| ||||||||||||| |||||||||||||||  || |||||||||||||||||    
T  35565475 taatgacgatcttctggcggaatcaaacttctgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactagaacatgttgtgctccc 35565376  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||||||||| |||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||||    
T  35565375 aaaacatgctcgtcacg-tttcatcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttagacgtttataccgaacgtgttccac 35565277  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||  ||||||||||||    
T  35565276 cctccttatgtctctggggtt 35565256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 151 - 301
Target Start/End: Complemental strand, 7082497 - 7082347
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||||||||| |||||||||||| |    
T  7082497 gtttggcaagtttgaattaccccttttcagaggtaagagaattgttgtagttggaatgcaccttaccataactaatgacgatcttctggcggaatcaagt 7082398  T
Q  251 tgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc 301  Q
    |||||||||||| || |||| ||||||||||||| ||||||||||||||||    
T  7082397 tgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatcc 7082347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 36350317 - 36350528
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||| ||||||||| | |||||||||| || |||| ||||||||||||| |||  |||||||||||  |||||||||||||||        
T  36350317 taatgacgatcttctggtggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacctacatatcgatccactggaacatgttgtgc---- 36350412  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
         |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||||||    
T  36350413 -----atgctcgtcacgttttcgtcgttcattaattccacccaagtgaatgatactctcccctcgtcgagcgttgaacgtttataccgaacgtgttccac 36350507  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  36350508 cctccttgtgtctctggggtt 36350528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 6793389 - 6793609
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| |||| |||||||| | |||||||||| || | || ||||||||||| | | |||||||||||| |  | |||||||||||||||||    
T  6793389 taatgacgatcttctggctgaatcaaacttttgatgatatcttcaattgatctcagcaacctcatccgcatatcgattcactagaacatgttgtgctccc 6793488  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||||||||||| |||||||||||| |||| ||||| |||||||||||||||| | |||||||||||||| |  ||||||| |||| || |||||     
T  6793489 aaaacatgctcgtcacattttcgtcgttcgttaattccactcaagtgaatgatactcactcctcgtcgagcgttaggcgtttataccgaatgtgttccat 6793588  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  6793589 cctccttgtgtctctggggtt 6793609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 108 - 262
Target Start/End: Complemental strand, 3459109 - 3458955
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||| ||||||| |||||  ||| ||||| |||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3459109 aaggaaaaatatgaacgctgggcttaatacttgagtcatggtcgtttggcaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaat 3459010  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatat 262  Q
    ||| |||||||||| ||||||||||||| | ||||||||||  ||||||||||||    
T  3459009 gcaccttaccctaactaatgacgatcttctagcggaatcaagctgttgatgatat 3458955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 272 - 440
Target Start/End: Complemental strand, 3169758 - 3169588
Alignment:
Q  272 atctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaa 369  Q
    ||||||||||||| ||||||||| ||||||  |||||||||||||||||  |||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  3169758 atctcagcaacgtcacccgcataccgatccactggaacatgttgtgctcttaaaatatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaa 3169659  T
Q  370 tgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||| ||||||||||||||| || ||||||| ||||||| |||||||||| ||  ||||||||||||    
T  3169658 tgatactct-ccctcgtcgagcgttagacgtttataccgaacgtgttccaccctctttatgtctctggggtt 3169588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 320 - 440
Target Start/End: Complemental strand, 3458941 - 3458820
Alignment:
Q  320 caaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattcca 418  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||  |||||| |||||||||||||    
T  3458941 caaaacatactcgtcacgttttcgtcgttctttaactcaacccaagtgaatgatactctcccctcgtcaagcgttggacatttataccgaacgtattcca 3458842  T
Q  419 ccctccttgcgtctctggggtt 440  Q
    |||||||||||||| |||||||    
T  3458841 ccctccttgcgtctttggggtt 3458820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 253 - 422
Target Start/End: Original strand, 35927470 - 35927642
Alignment:
Q  253 ttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttct 350  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||||||  || || ||| ||||||||||||||||| ||||||||||||||||||||     
T  35927470 ttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactgaaagatgatgtgctcccaaaacatgttcgtcacgttttcgtcgttcg 35927569  T
Q  351 ttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat-acgaacgtattccaccct 422  Q
    |||| ||||||||| | ||||||||||| |||||||||||| ||||| |||||| |||||||| || ||||||    
T  35927570 ttaattccacccaactaaatgatactcttccctcgtcgagcattggacgtttataacgaacgtgttacaccct 35927642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 40011936 - 40011834
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    |||||||||||||||||||||||||||||||||| | || |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40011936 aaggaaaaacatgaacgttgggcgaaatgcttgagttatggccgtttgacaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 40011837  T
Q  208 gca 210  Q
    |||    
T  40011836 gca 40011834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 223 - 432
Target Start/End: Original strand, 17366739 - 17366950
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    |||| ||||| || |||| |||||| | | ||||| |||| ||||||| |||||| ||||| |||||||||||| ||||  | |||||||||||||||||    
T  17366739 taatcacgatattctggcagaatcagactcttgataatatctttagttgatctcaacaacggtacccgcatatcaatccactagaacatgttgtgctccc 17366838  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||| | ||||| |||||||||||| |||| ||||||||| | ||||||| ||| ||||| ||||| |||||| ||||||| ||||| ||||||||    
T  17366839 aaaacatgtttgtcacattttcgtcgttcgttaattccacccaactaaatgatattcttccctcatcgagggttggacgtttatatcgaac-tattccac 17366937  T
Q  420 cctccttgcgtct 432  Q
    |||||||| ||||    
T  17366938 cctccttgtgtct 17366950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 151 - 354
Target Start/End: Complemental strand, 1695066 - 1694860
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||| ||||||||||||||| ||| |||||| |||||||||||||||| |||||  ||||| | | |  ||  ||||||||||||| |||||||||||    
T  1695066 gtttggaaagtttgaattacccaatt-cagagg-aagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatcttctggcggaatca 1694969  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| |||||| |||||| |||||||||||| |||  || |||||| |||||||||||||||||||||||||||||||||     
T  1694968 aacttttgatgatatcttcagttgatctcaacaacgtcacccgcatatcgttccagtgaaacatgctgtgctcccaaaacatgctcgtcacgttttcgtt 1694869  T
Q  346 gttctttaa 354  Q
    |||| ||||    
T  1694868 gttcgttaa 1694860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 267 - 440
Target Start/End: Complemental strand, 2599379 - 2599203
Alignment:
Q  267 agttaatctcagcaacgttacccgcatatcgatcctgg--aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaa 364  Q
    ||||||||||||||||||||| | |||||||||||  |  ||||||||||||||||||||||||||| ||| ||   ||| ||||  ||| |||||||||    
T  2599379 agttaatctcagcaacgttacacacatatcgatccacggtaacatgttgtgctcccaaaacatgctcttcatgtcgccgttgttcgctaattccacccaa 2599280  T
Q  365 gtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||||| |||| | |||||||  |||||| |||||||| ||||||||||||||||||||| ||||| ||||||    
T  2599279 ctgaatgatattctctcatcgtcgaatgttggacgtttataccgaacgtattccaccctccttgtgtctccggggtt 2599203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 22283849 - 22283704
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||| ||||| ||| |||||| || ||| ||||||    
T  22283849 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttatcctaactaaggacgattttatggtggaatc 22283752  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcata 294  Q
    ||| | |||||||||| || |||| |||| |||||| | |||||||||    
T  22283751 aaacttttgatgatatcttaagttgatctaagcaacttcacccgcata 22283704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 19400809 - 19400910
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  ||||||||||||||| || ||||||||||||||||||||||| ||| |||| || ||||||||||||||||||||||||||    
T  19400809 aaggaaaaacatgaatgaggggcgaaatgcttgagtc-ttgttgtttggcaagtttgaatttacctcatt-caaaggtaagacaattgttgtagttggaa 19400906  T
Q  207 tgca 210  Q
    ||||    
T  19400907 tgca 19400910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 3169984 - 3170080
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| || ||| ||||||||||| |||| ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  3169984 aaaacatgaatgtcgggtgaaatgcttgagtcat-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaatgca 3170080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 3169854 - 3169766
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgtt 196  Q
    ||||||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  3169854 aaggaaaaacatgaatgccgagcgaaatgcttgagtcttggccgtttggcaagtttgaattaccccatttcagaggtaagacaattgtt 3169766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 284
Target Start/End: Original strand, 17195314 - 17195423
Alignment:
Q  174 atttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagtta 271  Q
    |||||| ||||||||||||||||||||||||||  |||||    |||||  |||| |||||||| ||||||||||||||||||||| |||| |||||||     
T  17195314 atttcaaaggtaagacaattgttgtagttggaagatgcatt---ccctacctaatcacgatcttctggcggaatcaaattgttgataatatctttagttg 17195410  T
Q  272 atctcagcaacgt 284  Q
    |||||||||||||    
T  17195411 atctcagcaacgt 17195423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 40012063 - 40012163
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  ||||||||||||||| || | ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  40012063 aaggaaaaacatgaatgc-gggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 40012159  T
Q  207 tgca 210  Q
    ||||    
T  40012160 tgca 40012163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 1971811 - 1971912
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | || |||||||||| || | ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  1971811 aaggaaaaacatgaatgcggtgcaaaatgcttgagtcct-gttgtttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 1971908  T
Q  207 tgca 210  Q
    ||||    
T  1971909 tgca 1971912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 3601787 - 3601888
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  |||| |||||||||| ||||  ||||||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||    
T  3601787 aaggaaaaacatgaatgcggggcaaaatgcttgagtcata-ttgtttggcaaatttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 3601884  T
Q  207 tgca 210  Q
    ||||    
T  3601885 tgca 3601888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 351 - 423
Target Start/End: Complemental strand, 1693455 - 1693382
Alignment:
Q  351 ttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctc 423  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||| ||||||| ||||||| ||||||||||    
T  1693455 ttaattccacccaagtgagtgatactctcctctcgtcgagcgttggacgtttataccgaacgtgttccaccctc 1693382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 3459240 - 3459337
Alignment:
Q  112 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||||  ||||||||||||||| |||| |||||||||| ||||| |||| ||| |||| || |||||||||||||||||||||| |||||||    
T  3459240 aaaaacatgaacgcggggcgaaatgcttgagtcat-gttgtttggccagtttaaatttacctcatt-caaaggtaagacaattgttgtagttagaatgca 3459337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 12743168 - 12743225
Alignment:
Q  146 ttgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 202  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  12743168 ttgttgtttagcaagtttgaatttaccacatttcagaggtaagacaattgttgtagtt 12743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 440
Target Start/End: Complemental strand, 12742799 - 12742699
Alignment:
Q  341 tcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggt 439  Q
    ||||||||| |||| |||||| || ||||||||| | || | |||| |||||||||| |||||||| |||||||||||||||| |||| ||||| |||||    
T  12742799 tcgtcgttcgttaattccacctaactgaatgatattatctcatcgttgagcgttggacgtttataccgaacgtattccacccttcttgtgtctccggggt 12742700  T
Q  440 t 440  Q
    |    
T  12742699 t 12742699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 12805987 - 12806043
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 202  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  12805987 tgttgtttagcaagtttgaatttaccacatttcagaggtaagacaattgttgtagtt 12806043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 12806332 - 12806379
Alignment:
Q  156 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 202  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12806332 gcaagtttgaattcaccccatttcagaggtaagacaattgttgtagtt 12806379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 440
Target Start/End: Complemental strand, 12805622 - 12805517
Alignment:
Q  336 cgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctct 434  Q
    |||| ||||||||| |||| |||||| || ||||||||| | || | || | |||||||||| |||||||| |||||||||||||||| |||| |||||     
T  12805622 cgttatcgtcgttcgttaattccacctaactgaatgatattatctcatcattgagcgttggacgtttataccgaacgtattccacccttcttgtgtctcc 12805523  T
Q  435 ggggtt 440  Q
    ||||||    
T  12805522 ggggtt 12805517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 440
Target Start/End: Complemental strand, 7082332 - 7082276
Alignment:
Q  385 gtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||    
T  7082332 gtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 7082276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 12743511 - 12743558
Alignment:
Q  156 gcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 202  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||    
T  12743511 gcaagtttgaattcacgccatttcagaggtaagacaattgttgtagtt 12743558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 7082671 - 7082763
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||| || ||| ||||||||||| |||| ||||| || |||||||||| |||||||| |||| |||||| |||||| ||||||||||||    
T  7082671 aaaacatgaatgtcgggtgaaatgcttgagtcat-gttgtatgacaagtttgaatttacccca-ttcaaaggtaacacaatttttgtagttggaa 7082763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 10398273 - 10398330
Alignment:
Q  147 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  10398273 tgttgtttagcaagtttgaatttacccca-ttcaggggtaagacaattgttgtagttgg 10398330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 12742957 - 12742909
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||||||||||  || |||||||||||||||||||||||    
T  12742957 caagtttgaattaccccatttcgtag-taagacaattgttgtagttggaa 12742909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 36311871 - 36311932
Alignment:
Q  146 ttgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||  |||||||||  ||| || |||||||||||||||||||||||||||||||||    
T  36311871 ttgttgtttaacaagtttgaccttatccaatttcagaggtaagacaattgttgtagttggaa 36311932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 18308742 - 18308801
Alignment:
Q  146 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||| |||||| |||||||||  |||||| || ||||||||||||||||||||||||||    
T  18308742 ttgttgcttggcatgtttgaatttacccatt-caaaggtaagacaattgttgtagttggaa 18308801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 33371112 - 33371175
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||| |||||||||||| ||| |||| || |||||||| |||||||||||||||||||||    
T  33371112 tgttgtttgacaagtttgaatttacctcatt-caaaggtaagataattgttgtagttggaatgca 33371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 281
Target Start/End: Complemental strand, 12742876 - 12742818
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaa 281  Q
    |||| |||||||| ||||||||||| | |||||||||||| || |||| ||||||||||    
T  12742876 taatcacgatcttctggcggaatcagactgttgatgatatcttcagttgatctcagcaa 12742818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 206
Target Start/End: Original strand, 13131035 - 13131065
Alignment:
Q  176 ttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||||||||||||||||||    
T  13131035 ttcagaggtaagacaattgttgtagttggaa 13131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 36350043 - 36349990
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||| |||||||| || |||||| |||||||||||||||||||    
T  36350043 ttggcaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttggaa 36349990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 1695519 - 1695575
Alignment:
Q  150 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| ||||||||||| ||||||||||| |||||||||| |||||||| ||||||||    
T  1695519 tgtttagcaagtttgaatttaccccattt-agaggtaagaaaattgttgcagttggaa 1695575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 2599532 - 2599483
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgt 195  Q
    |||||||| ||||||||||||| | || ||||||||||||||||||||||    
T  2599532 tgttgtttagcaagtttgaatttatccaatttcagaggtaagacaattgt 2599483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 12805775 - 12805727
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||||||||| |  ||||||||||||||| ||||||||    
T  12805775 caagtttgaattaccccatttc-gtagtaagacaattgttgcagttggaa 12805727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 35566000 - 35566056
Alignment:
Q  150 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| ||||||||||| |||||||| ||||||||||||| |||||||| ||||||||    
T  35566000 tgtttagcaagtttgaatttacccca-ttcagaggtaagataattgttgcagttggaa 35566056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 36349801 - 36349745
Alignment:
Q  150 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| ||||||||||||| ||||||||| ||||||||||  ||||||||||||||||    
T  36349801 tgtttagcaagtttgaatttaccccattt-agaggtaagatgattgttgtagttggaa 36349745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 4723682 - 4723728
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 205  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||    
T  4723682 caagtttgaattaccccatt-caaagg-aagacaattgttgtagttgga 4723728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 11347157 - 11347247
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||| || ||| ||||||||||| || | |||||||| || |||| |||| |||||||| || |||||| |||||||||||||||||    
T  11347157 aaaacatgaatgtcgggtgaaatgcttgagtcct-gttgtttgacaggtttaaatttaccccatt-caaaggtaacacaattgttgtagttgg 11347247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 442
Target Start/End: Original strand, 12067697 - 12067817
Alignment:
Q  323 aacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccc 421  Q
    ||||||||| |||| |  ||||||||| ||||||||  || | |||| | || |||||||||||||| || ||||| || ||| | || ||||||||| |    
T  12067697 aacatgctcctcacatcgtcgtcgttcgttaactccgaccgactgaacgttattctcccctcgtcgaacgatggatattcataccaaatgtattccactc 12067796  T
Q  422 tccttgcgtctctggggttca 442  Q
    |||||| ||||| ||||||||    
T  12067797 tccttgtgtctccggggttca 12067817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 108 - 436
Target Start/End: Original strand, 31824516 - 31824847
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    |||||||||||||||||||||||||||||||||| | || |  ||||||||||||| |||||||| |||||| | |||||||||||||||||||||||||    
T  31824516 aaggaaaaacatgaacgttgggcgaaatgcttgagtaatggccgtttggcaagtttaaattaccctatttcaaatgtaagacaattgttgtagttggaat 31824615  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| | ||||||||||  |||||||||||| || |||| |||| ||||||||||||||||||| ||||  || ||    
T  31824616 gcaccttaccctaactaatgacgatcttctagcggaatcaagctgttgatgatatcttcagttgatctaagcaacgttacccgcatattgatccactaga 31824715  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  31824716 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatattctcccctcgtcgagcgttggacgtttata 31824815  T
Q  406 -cgaacgtattccaccctccttgcgtctctgg 436  Q
     ||||||||||||||||||||||| |||||||    
T  31824816 ccgaacgtattccaccctccttgcatctctgg 31824847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 51027654 - 51027989
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| | |||||||||||||||| |||| |  | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  51027654 aaggaaaaacatgaatgctgggcgaaatgcttgagtcatggccgcttggcaagtttgaattaccccatttcagaggtacgacaattgttgtagttggagt 51027753  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||| |||||||| ||||||||||||| || |||| |||||| ||||||||||||||||||||||  |||||    
T  51027754 gcaccttaccctaactaatgacgatcttatggtggaatcaagttgttgatgatatcttcagttgatctcaacaacgttacccgcatatcgatccactgga 51027853  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  51027854 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctccccttgtcgagcgttggacgtttata 51027953  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||| |||||| ||||||| ||||||||||||    
T  51027954 ccgaacgtgttccactctccttgtgtctctggggtt 51027989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 108 - 406
Target Start/End: Complemental strand, 21711850 - 21711550
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||||| || | |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21711850 aaggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagagaattgttgtagttggaat 21711751  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||||  |||||    
T  21711750 gcaccttaccctaactaatgacgatcttctggcggaatcaagttgttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactgga 21711651  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  21711650 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgataccctcccctcgtcgagcgttagatgtttata 21711551  T
Q  406 c 406  Q
    |    
T  21711550 c 21711550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 25762918 - 25762583
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| | | |||||||||||||| |||| |  ||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  25762918 aaggaaaaacatgaatgcttggcgaaatgcttgagtcatggccgtttgacaagtttgaattaccccattttagaggtaagacaattgttgcagttggaat 25762819  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| |||||||||||| ||||||||||||| || |||| |||||||||||||||||||||||||||||  |  ||    
T  25762818 gcaccttaccctaactaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccaccaga 25762719  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25762718 acatgttgtgctcccaaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttata 25762619  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||| || |||||||||||||| ||||| ||||||    
T  25762618 ccgaatgtgttccaccctccttgtgtctccggggtt 25762583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 108 - 432
Target Start/End: Complemental strand, 45939846 - 45939518
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaatt-gttgtagttggaa 206  Q
    ||||||||||||||||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45939846 aaggaaaaacatgaacgttgggcaaaatgcttgagtcatggtcgtttggcaagtttgaattaccccatttcagaggtaagacaattagttgtagttggaa 45939747  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||||||| ||||||||||||| |||  ||||||| ||||||||||||| || |||| |||||||||||||||| |||||||||||||  |||    
T  45939746 tgcaccttaccctaactaatgacgatcttatggaagaatcaagttgttgatgatatcttcagttgatctcagcaacgttactcgcatatcgatccactgg 45939647  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||||||||||||||||||||||||||||| || ||||||||| |||| ||||||||||||||||||| ||||| |||||||||||||| | ||||||    
T  45939646 aacatgttgtgctcccaaaacatgctcgtcacattatcgtcgttcgttaattccacccaagtgaatgataatctcctctcgtcgagcgttgaacgtttat 45939547  T
Q  405 a-cgaacgtattccaccctccttgcgtct 432  Q
    | ||||||| |||||||||||||| ||||    
T  45939546 atcgaacgtgttccaccctccttgtgtct 45939518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 108 - 440
Target Start/End: Original strand, 51428079 - 51428414
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  |  |||||||||||| || | |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51428079 aaggaaaaacatgaatgccgatcgaaatgcttgagtcctggccgtttgccaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 51428178  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| | ||||||||||  |||||||||||| || |||| |||||| ||||||||||||||||||||||  |||||    
T  51428179 gcaccttaccctaactaatgacgatcttcttgcggaatcaagctgttgatgatatcttcagttgatctcaacaacgttacccgcatatcgatccactgga 51428278  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| | |||||||    
T  51428279 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaactccacacaagtgaatgatactctcccctcgttgagcgttgaacgtttata 51428378  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||||| |||||||||||||| ||||||||||||    
T  51428379 ccgaacgtgttccaccctccttgtgtctctggggtt 51428414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 108 - 435
Target Start/End: Original strand, 33163431 - 33163761
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| || | |||||||| |||| || | |  |||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  33163431 aaggaaaaacatgaatgtcgagcgaaatgtttgagtcctggccgtttggcaagtttgaaataccccatttaagaggcaagacaattgttgtagttggaat 33163530  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||||||||||||  |||||||||||| || |||| |||||| ||||||||||| ||||||||||  |||||    
T  33163531 gcaccttaccctaactaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcaacaacgttacccacatatcgatccactgga 33163630  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  33163631 acatgttgtgctcccaaaacatgctcgtcacattttcgtcgttctttaactccacccaagtgaatgttactctcccctcgttgagcgttggacgtttata 33163730  T
Q  406 -cgaacgtattccaccctccttgcgtctctg 435  Q
     |||||||||||||||||| |||||||||||    
T  33163731 ccgaacgtattccaccctcattgcgtctctg 33163761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 108 - 434
Target Start/End: Original strand, 14330583 - 14330910
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| | |||||||| |||| |||   |||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14330583 aaggaaaaacatgaatgatgggcgaa-tgct-gaagacttgtcgtttgataagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 14330680  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgga 305  Q
    ||| |||||| ||| ||||||||||||| ||||||||||||| | |||||||||| || |||| ||||||||||||||||||||||||||||||  ||||    
T  14330681 gcaccttaccttaactaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccattgga 14330780  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||| |||||||    
T  14330781 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgataccctcccctcgtcgagtgttggacgtttata 14330880  T
Q  406 -cgaacgtattccaccctccttgcgtctct 434  Q
     |||| || |||||||||||||| ||||||    
T  14330881 ccgaaagtgttccaccctccttgtgtctct 14330910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 108 - 379
Target Start/End: Complemental strand, 27759647 - 27759374
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| |||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  27759647 aaggaaaaacatgaacgctgggcgaaatgcttgagtcatagccgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttgaaat 27759548  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||||||||||||  |||||||||||| || |||| |||||||||||||||| ||||||||||||  |||||    
T  27759547 gcaccttaccctaactaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttactcgcatatcgatccactgga 27759448  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctc 379  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27759447 acatgctgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctc 27759374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 146 - 440
Target Start/End: Complemental strand, 1226441 - 1226145
Alignment:
Q  146 ttgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaat 245  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||    
T  1226441 ttgtcgtttggcaagtttgaattaccccatttatgaggtaagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttctggcggaat 1226342  T
Q  246 caaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcg 343  Q
    |||| | |||||||||| || |||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||| ||||||    
T  1226341 caaacttttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactagaacatgttgtgctcccaaaacatgctcgtcacattttcg 1226242  T
Q  344 tcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| ||||||| | ||||||||||||||||| || ||||||||||||    
T  1226241 tcgttctttaattccacacaagtgaatgataccctcccctcgtcgagcgttggacgtttatagcaaacgtattccaccctcc-tgtgtctctggggtt 1226145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 242346 - 242638
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||  ||| ||||||||||||| ||||||||||||      
T  242346 gtttggcaagtttgaattaccctatttcagaggtaagacaattgttatagttggaatgcaccttactttaactaatgacgatcttctggcggaatcaagc 242445  T
Q  251 tgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 348  Q
    |||||||||||| || |||| |||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  242446 tgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactggaacatgatgtgctcccaaaacatgctcgtcacgttttcatcgtt 242545  T
Q  349 ctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  242546 ctttaactccacctaagtgaatgatgctctcccctcgtcgagtgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 242638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 112 - 440
Target Start/End: Original strand, 46816416 - 46816745
Alignment:
Q  112 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 211  Q
    ||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  46816416 aaaaacatgaatgccgagcgaaatgcttgagtcttggccgtttggcaagtttgaattaccccatctcagaggtaagacaattgttgtagttggaatgcac 46816515  T
Q  212 cttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacat 309  Q
    ||| |||||| ||||||||||||| ||||||||||||  | |||||||||| || |  | |||||| |||||||||| ||||||||||||  ||||||||    
T  46816516 cttgccctaactaatgacgatcttctggcggaatcaagctattgatgatatcttca--tgatctcaacaacgttacctgcatatcgatccactggaacat 46816613  T
Q  310 gttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-ga 408  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| || ||||| ||    
T  46816614 gttgtgctcccaaaacatgctcgtcacgtttttgtcgttctttaactccacccaagtgaatgataccctcccctcgtcgagcattggacgtgtatactga 46816713  T
Q  409 acgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||||||||||||||||||||||||||||    
T  46816714 acgtattccaccctccttgcgtctctggggtt 46816745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 112 - 440
Target Start/End: Complemental strand, 49064295 - 49063964
Alignment:
Q  112 aaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcat 211  Q
    ||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  49064295 aaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttaagaggtaagacaattgttgtagttggaatgcac 49064196  T
Q  212 cttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacat 309  Q
    |||||||||| ||||||||||||| ||||||||||||| | |||||||||| || |||| |||| |||||||| |||||||||||||||  | | |||||    
T  49064195 cttaccctaactaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacgtcacccgcatatcgatccacggaaacat 49064096  T
Q  310 gttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cga 408  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |||||| ||||||| |||    
T  49064095 gttgtgctccaaaaacatgctcgtcacgttttcgtcgttctttaattccacccaagtgaatgacaccctcccctcgtcgagtgttggacgtttataccga 49063996  T
Q  409 acgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||||| ||||||| ||||||||||||    
T  49063995 acgtgttccactctccttgtgtctctggggtt 49063964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 109 - 440
Target Start/End: Complemental strand, 37866726 - 37866391
Alignment:
Q  109 aggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 208  Q
    |||||||||||||| |  | ||||||||||||| || | |  ||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  37866726 aggaaaaacatgaatgccgagcgaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttcagaggtaagacgactgttgcagttggaatg 37866627  T
Q  209 catcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaa 306  Q
    || |||||||||| ||||||||||||| | ||||||||||  | |||||||||| || |||| ||||||||||||| |||||||||||||||  ||||||    
T  37866626 caccttaccctaactaatgacgatcttctagcggaatcaagatattgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaa 37866527  T
Q  307 catgttgtgctccc-aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||| ||||||||||| |||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37866526 catgttgtgctcccgaaaacatgctcatcacgttttcgtcgctcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 37866427  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     |||| || ||||||||| |||| ||||||| ||||    
T  37866426 ccgaatgtgttccacccttcttgtgtctctgaggtt 37866391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 151 - 432
Target Start/End: Original strand, 20901598 - 20901882
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||  || |||||||| |    
T  20901598 gtttggaaagtttgaattacctcatttcagaggtaagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttcaggtggaatcaagt 20901697  T
Q  251 tgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 348  Q
    |||||||||||| || |||| |||||||||  ||||||||||||||||||  || ||||||| |||||||||||||||||||||||||||||||||||||    
T  20901698 tgttgatgatatcttcagttgatctcagcagtgttacccgcatatcgatccactagaacatgctgtgctcccaaaacatgctcgtcacgttttcgtcgtt 20901797  T
Q  349 ctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtct 432  Q
    | |||| ||||||||||||||||||| ||||| |||||||| ||||||| ||||||| ||||||| ||| |||||||||| ||||    
T  20901798 cgttaattccacccaagtgaatgatattctccactcgtcgaacgttggacgtttataccgaacgtgttctaccctccttgtgtct 20901882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 147 - 440
Target Start/End: Original strand, 21017105 - 21017399
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| ||||||||||||||| |||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  21017105 tgttgtttgacaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgatcttctggcggaatc 21017202  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||    
T  21017203 aaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaacatggtcgtcacgttttcgt 21017302  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||| |||||| ||||||||||||    
T  21017303 cgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctggggtt 21017399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 147 - 440
Target Start/End: Original strand, 40353701 - 40353995
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||||||||    
T  40353701 tgttgtttgacaggtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacaatcttctggcggaatc 40353798  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||    
T  40353799 aaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtcacgttttcgt 40353898  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||| |||||| ||||||||||||    
T  40353899 cgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctctggggtt 40353995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 129 - 427
Target Start/End: Complemental strand, 55797039 - 55796741
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||| |||||| || ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  55797039 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattagcccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatga 55796943  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||    
T  55796942 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 55796843  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||| ||||    
T  55796842 tggtcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatcct 55796743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 147 - 440
Target Start/End: Original strand, 20778796 - 20779091
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||||||||||||||||  ||   |||| ||| |||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||    
T  20778796 tgttgtttggcaagtttgaatttgcctcattcaaagg-aagacaattgttgtggttggaatgcaccttaccctacctaatgacgatcttttggcggaatc 20778894  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| ||||||||||||  ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  20778895 aaacttttgatgatatcttcagttgatctcagcaacgaaacccgcatatcgatccattggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 20778994  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| ||||||||| ||||||||||||||||||||| |||||||||| ||||||| ||||||| ||||||||| |||| || || ||||||    
T  20778995 cgttcgttaattccacccaaatgaatgatactctcccctcgtagagcgttggacgtttataccgaacgtgttccacccttcttgtgtgtccggggtt 20779091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 151 - 432
Target Start/End: Original strand, 32937834 - 32938116
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    ||||| ||||||||||||||| |||| || ||| |||||||||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||    
T  32937834 gtttgacaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctatctaatgacgatcttctggcggaatcaaat 32937931  T
Q  251 tgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 348  Q
    | |||||||||| || |||| |||||| ||||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  32937932 ttttgatgatatcttcagttgatctcaacaacgttacccgcatatcgatccactggaacatgctgtgctcccgaaacatgctcgtcacgttttcgtcgtt 32938031  T
Q  349 ctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtct 432  Q
    | |||| ||||||||| ||||||||| |||||| |||||||| |||||| ||||||| ||||||| |||||||||||||| ||||    
T  32938032 cgttaattccacccaactgaatgatattctcccttcgtcgagtgttggacgtttataccgaacgtgttccaccctccttgtgtct 32938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 1043068 - 1042736
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | ||||||||||||| |||| ||||||||||   |||||||| | | |||| || ||||||||||||||||| ||||||||    
T  1043068 aaggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggccgatttgaatttatctcatt-caaaggtaagacaattgttgcagttggaa 1042971  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    || | |||||||||| ||||||||||||| |||||||||||| |||||||| |||| || |||| ||||||||||||| ||||||||||||||||  |||    
T  1042970 tgtaccttaccctaactaatgacgatcttctggcggaatcaagttgttgattatatcttcagttgatctcagcaacgtcacccgcatatcgatccactgg 1042871  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  1042870 aacatgctgtgctcccaaaacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgaaactctcccctcgtctagcgttggacgtttat 1042771  T
Q  405 acgaacgtattccaccctccttgcgtctctggggtt 440  Q
    || || |  |||||||||||||| |||| |||||||    
T  1042770 ac-aaggcgttccaccctccttgtgtctttggggtt 1042736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 129 - 440
Target Start/End: Original strand, 41794473 - 41794784
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  41794473 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 41794569  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  |||||||||||||||||||||||||    
T  41794570 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaaca 41794669  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  41794670 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 41794769  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  41794770 tgtgtctctggggtt 41794784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 39589248 - 39588914
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | | ||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||    
T  39589248 aaggaaaaacatgaatgccgagtgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgaagttggaa 39589151  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| ||||||| || ||||||||||||| | |||||||||| ||||||||||||| || |||| ||||||||||||| | ||||||||||||||  |||    
T  39589150 tgcaccttaccccaactaatgacgatcttctagcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcatccgcatatcgatccactgg 39589051  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||| ||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  39589050 aacatgctgtgctcccaaaacatgctcgtcacattttcgtcgtttgttaattccacccaagtgaatgaaactctccccccgtcgagcgttggacgtttat 39588951  T
Q  405 ac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    || ||| || |||||||||||||| |||| |||||||    
T  39588950 actgaaggtgttccaccctccttgtgtctatggggtt 39588914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 43889428 - 43889721
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||| | | |  ||  ||||||||||||| |||||||||||    
T  43889428 gtttggcaagtttgaattaccccattt-agagg-aagacaattgttgtagttggaaggtgcattcattcggtacctaatgacgatcttctggcggaatca 43889525  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | ||||| |||| || |||| |||||| |||||| ||||||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||||    
T  43889526 aacttttgattatatcttcagttgatctcaacaacgtcacccgcatatcgatccactggaacatgatgtgctcccaaaacatgttcgtcacgttttcgtc 43889625  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  43889626 gttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 43889721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 129 - 440
Target Start/End: Original strand, 6177226 - 6177537
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  6177226 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 6177322  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||    
T  6177323 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 6177422  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  6177423 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 6177522  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  6177523 tgtgtctctggggtt 6177537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 129 - 440
Target Start/End: Complemental strand, 56139206 - 56138895
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  56139206 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 56139110  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||    
T  56139109 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 56139010  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  56139009 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 56138910  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  56138909 tgtgtctctggggtt 56138895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 22437189 - 22436896
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||||  || | |||||||||||||||| |  ||  ||||| | | || ||  |||||||||||||  ||||||||||    
T  22437189 gtttggcaagtttgaattaccccattt--gaaggaagacaattgttgtagctaaaaggtgcattcattccgtacctaatgacgatcttccggcggaatca 22437092  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||    
T  22437091 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcatc 22436992  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  22436991 gttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 22436896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 9489997 - 9489664
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| || | | ||||||||||| || | ||||||||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||    
T  9489997 aaggaaaaacatgaatgtcgagtgaaatgcttgagtcct-gttgtttggcaggtttgaatttatctcatt-caaaggtaagacaattgttgcagttggaa 9489900  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgg 304  Q
    ||||  ||||||||| ||||||||||||| |||||||||||| ||||||||||||| || |||| ||||||  ||||| ||||||||||| |||  ||||    
T  9489899 tgcactttaccctaactaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcaataacgtcacccgcatatcaatccactgg 9489800  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||| |||||| |||||||||||||||||| |||||||||||  |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  9489799 aacatgctgtgct-ccaaaacatgctcgtcacattttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttat 9489701  T
Q  405 ac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    || ||| || |||||||||||||| ||||| ||||||    
T  9489700 actgaaggtgttccaccctccttgtgtctccggggtt 9489664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 129 - 440
Target Start/End: Complemental strand, 49095041 - 49094730
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  49095041 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 49094945  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||| ||||| || |||| |||| |||||| | ||||||||||||||||  |||||||||||||||||||||||||    
T  49094944 cgatcttgtggcggaatcaaacttttgacgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaaca 49094845  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||| ||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  49094844 tggtcgtcacgtttttgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 49094745  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  49094744 tgtgtctctggggtt 49094730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 21169729 - 21169436
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||||||||||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  21169729 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaaggtgcattcattccgtacctaatgacgatcttctggcggaatca 21169632  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    |||| |||||||||| || |||| ||||||||||||| ||| ||||||||||||  ||| ||||| ||||||||||||||||||||||| ||| ||| ||    
T  21169631 aatttttgatgatatcttcagttgatctcagcaacgtcacctgcatatcgatccactggtacatgctgtgctcccaaaacatgctcgtcgcgtattcatc 21169532  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    || | |||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  21169531 gtccgttaattcgacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatatcgaacgtgttccaccctccttgtgtctctggggtt 21169436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 28082556 - 28082223
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | |||||||||| || || | ||||||||||| ||||||||| | | |||| || ||| ||||||||||||||||||||||    
T  28082556 aaggaaaaacatgaatgccgagcgaaatgctcgagtcct-gttgtttggcaggtttgaatttatctcatt-caaagg-aagacaattgttgtagttggaa 28082460  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||||||| ||||||||||||| ||||||||||||||| |||||||||| || |||| |||| || ||| | ||| |||||| |||||  ||     
T  28082459 tgcaccttaccctaactaatgacgatcttctggcggaatcaaatttttgatgatatcttcagttgatctaagtaacttcacctgcatattgatccactga 28082360  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||| |||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  28082359 aacatgatgtgctcccaaaacatgctcgtcatgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcatcgagcgttggacgtttat 28082260  T
Q  405 a-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | | ||||| ||||||| |||||| ||||||||||||    
T  28082259 accaaacgtgttccaccatccttgtgtctctggggtt 28082223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 49791938 - 49792158
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    |||||| ||||||||||||||||||| ||||||||||||| || |||| ||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  49791938 taatgatgatcttttggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacctgcatatcgatccactggaacatgttgtgctccc 49792037  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||| ||||||    
T  49792038 aaaacatgctcgtcacgttttcgtcattcgttaattccacccaagtgaataatactctcccatcgtcgagcgttggacgtttataccgaacgtgttccac 49792137  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  49792138 cctccttgtgtctctggggtt 49792158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 957384 - 957677
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||||||||||| |||||||||||| || ||| |||||||||||||||| |||||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  957384 gtttggcaagtttcaattaccccatt-caaagg-aagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatcttctggcggaatca 957481  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| ||||||| ||||||||||||| ||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||||||||    
T  957482 aacttttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactggaacatgctgtgctcctaaaacatgctcgtcacgttttcgtc 957581  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||||||  ||||||| |||| |||||||||||||||  ||||| ||||||    
T  957582 gttcgttaattccacccaagtgaatgatacgctcccctcgtcgagcgttggacatttatacagaacatattccaccctccttatgtctccggggtt 957677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 26591687 - 26591907
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| |||||||||||| ||||||||||||| || |||| |||| |||||||||||||||||||||||||  |||||||||||||||||||    
T  26591687 taatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatcttagcaacgttacccgcatatcgatccactggaacatgttgtgctccc 26591786  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||| ||| |||||||||||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  26591787 aaaatatgttcgtcacgtttttgtcgttcgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttatatcgaacgtgttccac 26591886  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  26591887 cctccttgtgtctctggggtt 26591907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 34153215 - 34153508
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| ||||||| |||||||| |||||  ||||| | | || ||  ||||||||||||| |||| ||||||    
T  34153215 gtttggcaagtttgaattaccccatt-caaagg-aagacaactgttgtagctggaaggtgcattcattccgtacataatgacgatcttctggcagaatca 34153312  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| |||||| |||||| | |||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  34153313 aacttttgatgatatcttcagttgatctcaccaacgtcatccgcatattgatccactggaacatgttgtgctcccaaaacatgatcgtcacgttttcgtc 34153412  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||    
T  34153413 gttcgttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccaccctccttgtgtctctggggtt 34153508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 157 - 433
Target Start/End: Complemental strand, 17211536 - 17211258
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgtt 254  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||  ||||| |  |||||  |||| |||||||| ||||||||||| | ||||    
T  17211536 caagtttgaattacctcatttcagag-taagacaattgttgtagttggaagatgcattt--ccctacctaatcacgatcttctggcggaatcagactgtt 17211440  T
Q  255 gatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcttt 352  Q
    ||| |||| ||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||| ||    
T  17211439 gataatatctttagttgatctcagcaacgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgtttttatcgttcgtt 17211340  T
Q  353 aactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctc 433  Q
    || || || ||| ||||||||| ||| |||||||||| ||||||| ||||||| |||||||||||||||||||||| |||||    
T  17211339 aattcgactcaaatgaatgatattcttccctcgtcgaacgttggacgtttataccgaacgtattccaccctccttgtgtctc 17211258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 47657357 - 47657577
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||| ||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  47657357 taatgacgatcttctggtggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgtgctccc 47657456  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||| |||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||    
T  47657457 aaaatatgctcgtcacgttttggtcgttcgttaattccatccaagtgaatgatactctcccatcgtcgagcgttggatgtttataccgaacgtgttccac 47657556  T
Q  420 cctccttgcgtctctggggtt 440  Q
    || ||||| ||||||||||||    
T  47657557 ccaccttgtgtctctggggtt 47657577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 157 - 440
Target Start/End: Complemental strand, 18412864 - 18412580
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgtt 254  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||  |||||    |||||  |||| |||||||| |||| |||||||||||||    
T  18412864 caagtttgaattaccccatttcagag-taagacaattgttgtagttggaaggtgcatt---ccctacctaatcacgatcttctggcagaatcaaattgtt 18412769  T
Q  255 gatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcttt 352  Q
    ||| |||| || |||| |||||||||||||||| |||||||||||||  || |||||| |||||||||||||||||||| ||||||| ||||||||| ||    
T  18412768 gataatatattcagttgatctcagcaacgttacacgcatatcgatccactgaaacatggtgtgctcccaaaacatgctcctcacgttatcgtcgttcatt 18412669  T
Q  353 aactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    || |||||| || ||||||||| ||| || ||||||||||||||| ||||||| ||||||||||||||||| |||| ||||| ||||||    
T  18412668 aattccaccgaactgaatgatattcttccatcgtcgagcgttggacgtttataccgaacgtattccacccttcttgtgtctccggggtt 18412580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 225 - 440
Target Start/End: Complemental strand, 2773212 - 2772994
Alignment:
Q  225 atgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaa 322  Q
    ||||||||||| |||||||||||| ||||||||| ||| || |||| ||||||  ||||||||||||||||||||||  |||||||||||||||||||||    
T  2773212 atgacgatcttctggcggaatcaagttgttgatggtatcttcagttgatctcaataacgttacccgcatatcgatccactggaacatgttgtgctcccaa 2773113  T
Q  323 aacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat-acgaacgtattccaccc 421  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||||     
T  2773112 aacatgttcgtcacgttttcgtcgttcgttaattccacccaagtgaatgatactctcccctcgtagagcgttggacgtttataacgaacgtgttccacca 2773013  T
Q  422 tccttgcgtctctggggtt 440  Q
    |||||| |||||| |||||    
T  2773012 tccttgtgtctctcgggtt 2772994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 150 - 440
Target Start/End: Original strand, 49817572 - 49817866
Alignment:
Q  150 tgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca---tcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||||||||||||||||||||| || | | ||||||||||||||||||| || | |   || | || ||  ||||||||||||| ||||||||||    
T  49817572 tgtttggcaagtttgaattaccccatt-caaatg-aagacaattgttgtagttgaaaggtacattcattccgtacctaatgacgatcttctggcggaatc 49817669  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    | | ||||||| |||| || |||| ||||||||||||||||||||||||||||||  | ||||||| |||||||||||||||||||||| ||||||||||    
T  49817670 agactgttgataatatcttcagttgatctcagcaacgttacccgcatatcgatccactagaacatgatgtgctcccaaaacatgctcgtaacgttttcgt 49817769  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| ||||||||| |||||| |||||||||||||| |||||||||| |||||||| |||||| |||||||||||||| |||||| |||||    
T  49817770 cgttcgttaattccacccaactgaatgttactctcccctcgtagagcgttggacgtttatactgaacgtgttccaccctccttgtgtctctagggtt 49817866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 44560109 - 44560402
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |||||  ||||| | | || ||  |||||||||||||  || | |||||    
T  44560109 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatcttaaggagaaatca 44560206  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||||||||||| || |  ||||||||| | ||||||||||||||||| ||||||||||||||    
T  44560207 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatacactggaacatgctttgctcccaaaacatgcttgtcacgttttcgtc 44560306  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||    
T  44560307 gttcgttaattccatccaagtgaatgatattctcccctcgtcgagcgttggacgtttatactgaacgtgttccaccctccttgtgtctctggggtt 44560402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 6282252 - 6282545
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||| ||||||||||||||| || ||| |||||||||||||||| |  ||  ||||| | | || ||| ||||||||||||| |||| ||||||    
T  6282252 gtttggcaagcttgaattaccccatt-caaagg-aagacaattgttgtagctaaaaggtgcattcattccgtaactaatgacgatcttctggcagaatca 6282349  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  6282350 aacttttgatgatatcttcagttgatcttagcaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 6282449  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||| |||| |||||||||||||||||||||||| ||| |||||| |||||| ||||||| ||||||| |||||||||||||  |||| |||||||    
T  6282450 attcgttaattccacccaagtgaatgatactctctccttgtcgagtgttggacgtttataccgaacgtgttccaccctccttctgtctatggggtt 6282545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 34529798 - 34530018
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| ||| ||||||||||||  |||||||||||||||||||    
T  34529798 taatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacctgcatatcgatccactggaacatgttgtgctccc 34529897  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||| ||||||||||| |||||||||||  |||| ||||||||||||||||| |||||||||| ||||||||||||| ||||||| |||| || ||||||    
T  34529898 aaaaaatgctcgtcacattttcgtcgtttgttaattccacccaagtgaatgaaactctccccttgtcgagcgttggacgtttataccgaaggtgttccac 34529997  T
Q  420 cctccttgcgtctctggggtt 440  Q
    ||| |||| ||||||||||||    
T  34529998 ccttcttgtgtctctggggtt 34530018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 36776448 - 36776741
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |||||  ||||| | | |  ||  ||||||||||||||  |||||||||    
T  36776448 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatctttcagcggaatca 36776545  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| |||||| |||||| ||||||||||||||||  |||||||||  ||||||||||| |||||||||||||||||||||    
T  36776546 aacttttgatgatatcttcagttgatctcaacaacgtcacccgcatatcgatccactggaacatgccgtgctcccaaaccatgctcgtcacgttttcgtc 36776645  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| || |||||||||||| ||||||||||||||||||||||||||  |||||| | ||||| |||||||||||||| |||| |||||||    
T  36776646 gttcgttaattctacccaagtgaataatactctcccctcgtcgagcgttggacatttatacctaacgtgttccaccctccttgtgtctatggggtt 36776741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 147 - 440
Target Start/End: Complemental strand, 3393581 - 3393289
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaa 244  Q
    ||||||||  ||||||||||||  |||||||||| ||||| |||| ||||||||||||||  |||||    |||||  |||| | |||||| ||||||||    
T  3393581 tgttgtttaacaagtttgaatt--cccatttcag-ggtaatacaaatgttgtagttggaaggtgcatt---ccctacctaatcatgatcttctggcggaa 3393488  T
Q  245 tcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttc 342  Q
    ||| | ||||||| |||| || |||| ||||||||||||||||  ||||||||||||  | |||||||||||||||||||||||||||| ||||||||||    
T  3393487 tcagactgttgataatatcttcagttgatctcagcaacgttacatgcatatcgatccactagaacatgttgtgctcccaaaacatgctcctcacgttttc 3393388  T
Q  343 gtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||| |||| ||||||||| | ||||||| |||||| || |||||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||    
T  3393387 gtcgttcgttaattccacccaactaaatgataatctcccatcctcgagcgttggacgtttatatcgaacgtattccaccctccttgtgtctccggggtt 3393289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 4785424 - 4785644
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| ||||||| |||| || |||| || ||||||||||| |||||||||||||||  |||||||||||||||||||    
T  4785424 taatgacgatcttgtggcggaatcaaactgttgataatatcttcagttgatatcagcaacgttccccgcatatcgatccactggaacatgttgtgctccc 4785523  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    |||||||| || ||||||||| ||||||| |||| |||||| ||||||||||| ||||||||||||| || ||| || ||||||| |||| || ||||||    
T  4785524 aaaacatgttcttcacgtttttgtcgttcgttaattccaccaaagtgaatgatgctctcccctcgtcaagggtttgacgtttataccgaatgtgttccac 4785623  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  4785624 cctccttgtgtctctggggtt 4785644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 24607027 - 24606737
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    |||||| |||||||||||||| |||| || ||| |||||||||||||||||||||||| |  ||  ||||  |||| |||||||| ||||||||||| |     
T  24607027 gtttggaaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaatgtacatttacctacctaatcacgatcttctggcggaatcagac 24606930  T
Q  251 tgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcct--ggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 348  Q
    | ||||| |||| || |||| |||||||||||||||||| |||||| ||||   |||||||| ||||||||||| |||||||||||||||||||||||||    
T  24606929 tcttgataatatcttcagttgatctcagcaacgttacccacatatcaatccacgggaacatgatgtgctcccaatacatgctcgtcacgttttcgtcgtt 24606830  T
Q  349 ctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||| || |||||| ||||| ||||||||| || |||||||||||||  |||||| ||||||| |||||||||||||| ||||| ||||||    
T  24606829 cgttaattctacccaactgaataatactctccgcttgtcgagcgttggacatttatatcgaacgtgttccaccctccttgtgtctccggggtt 24606737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 49423686 - 49423980
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||| ||| |||||||||||||||| || |||||| ||||||||||||| |||||  ||||| | | || ||  ||||||||||||| |||| ||||||    
T  49423686 gtttgacaaatttgaattaccccatt-caaaggtaacacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatcttatggcagaatca 49423784  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||| | || |||| ||||||||||||| ||||||||||||||||  | |||||||  ||||||||| |||||||||||||||||||||||    
T  49423785 aacttttgatgatttcttcagttgatctcagcaacgtcacccgcatatcgatccacttgaacatgccgtgctcccagaacatgctcgtcacgttttcgtc 49423884  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| |||| |||||||||||||| ||||||||||||||||| ||||  |||||| ||||| | |||||||||||||| |||| |||||||    
T  49423885 gttcgttaattccatccaagtgaatgataatctcccctcgtcgagcgctggacatttataccgaacatgttccaccctccttgtgtctatggggtt 49423980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 216 - 432
Target Start/End: Complemental strand, 11288506 - 11288288
Alignment:
Q  216 ccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttg 313  Q
    ||||| ||||| |||||||| |  | |||||||||||| ||| |||| || |||| |||||||||||||||| |||||||||||||  ||||||||| ||    
T  11288506 ccctacttaatcacgatcttctaacagaatcaaattgt-gataatatcttcagttgatctcagcaacgttactcgcatatcgatccactggaacatgatg 11288408  T
Q  314 tgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgt 412  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||| |||||||||||||| ||||||| |||||||| ||||||    
T  11288407 tgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaactaaatgatattctcccctcgtcgaccgttggacgtttatacggaacgt 11288308  T
Q  413 attccaccctccttgcgtct 432  Q
    ||||||||||||||| ||||    
T  11288307 attccaccctccttgtgtct 11288288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 182 - 440
Target Start/End: Complemental strand, 10312517 - 10312257
Alignment:
Q  182 ggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaa 281  Q
    ||||||||||||||||||||||||| |    || |||||  |||| ||||||||   ||||||| | ||||||||| |||| || |||| |||| | |||    
T  10312517 ggtaagacaattgttgtagttggaaggtgaatt-ccctacctaatcacgatcttccagcggaattagattgttgataatatcttcagttgatcttaacaa 10312419  T
Q  282 cgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctc 379  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||| ||||    
T  10312418 cgttacccgcatatcgatccactggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcgttaattccacccaactaaatgatattctc 10312319  T
Q  380 ccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    || |||||||| |||| ||||||||| ||||| |||||||| ||||||| ||||| ||||||    
T  10312318 ccatcgtcgagtgttgtatgtttataccgaacatattccacactccttgtgtctccggggtt 10312257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 223 - 433
Target Start/End: Complemental strand, 42886471 - 42886255
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    |||||| |||||| ||||||||||| | ||||||| |||| || |||| |||||||||||||||||||| |||||||||  | ||| ||||||||||| |    
T  42886471 taatgatgatcttctggcggaatcagactgttgataatatcttcagttgatctcagcaacgttacccgcgtatcgatccactagaaaatgttgtgctctc 42886372  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatga---tactctcccctcgtcgagcgttggatgtttat-acgaacgtattc 416  Q
    ||| ||||||||||| ||||||||||||  |||| |||||||||||||||||   ||||||||||||||||||||||||| |||||| |||||||| |||    
T  42886371 aaagcatgctcgtcatgttttcgtcgttggttaattccacccaagtgaatgatagtactctcccctcgtcgagcgttggaagtttataacgaacgtgttc 42886272  T
Q  417 caccctccttgcgtctc 433  Q
    ||||||||||| |||||    
T  42886271 caccctccttgtgtctc 42886255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 174 - 440
Target Start/End: Complemental strand, 13851002 - 13850734
Alignment:
Q  174 atttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagtta 271  Q
    |||| |||||||||| |||||||||||||||||  |||||    |||||  |||| ||| |||| ||||||||||||| ||||||  |||| |||||||     
T  13851002 attttagaggtaagataattgttgtagttggaaggtgcatt---ccctacctaatcacggtcttctggcggaatcaaactgttgagaatatctttagttg 13850906  T
Q  272 atctcagcaacgttacccgcatatcgatcctgg--aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaa 369  Q
    |||||||||| |||||   |||||||||||  |  |||||||||||||||||||||||| |||||||||  ||||||||  |||| | || |||| ||||    
T  13850905 atctcagcaatgttacatacatatcgatccacggtaacatgttgtgctcccaaaacatgttcgtcacgtcgtcgtcgtttgttaatttcatccaactgaa 13850806  T
Q  370 tgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||||| ||||| | ||||||| ||||||| | |||||||||||||||||||| ||||||||||||    
T  13850805 tgatattctcccatcgtcaaacgttggacgtttataccaaacgtattccaccctccttgtgtctctggggtt 13850734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 151 - 432
Target Start/End: Complemental strand, 31324450 - 31324167
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaa 248  Q
    |||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||  |||||    |||||  |||| | |||||| | ||||||||||    
T  31324450 gtttagcaagtttgaattatctcatttcaaaggtaagacaattgttgtagttggaaggtgcatt---ccctacctaatcatgatcttctagcggaatcaa 31324354  T
Q  249 attgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcctgg--aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcg 346  Q
    | ||||||  || | || |||| ||||||||||| |||| | |||||||||||  |  ||||||||||||||| ||||||||||||||||||  | ||||    
T  31324353 actgttgagaatgtcttcagttgatctcagcaactttacacacatatcgatccacggtaacatgttgtgctccaaaaacatgctcgtcacgtcattgtcg 31324254  T
Q  347 ttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtct 432  Q
    ||| |||| ||||||||| ||||| ||| |||||| ||||||| ||||||| |||||||| |||| ||||||| |||| ||| ||||    
T  31324253 ttcgttaattccacccaactgaataatattctcccatcgtcgaacgttggacgtttatactgaacctattccatcctcattgtgtct 31324167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 174 - 440
Target Start/End: Complemental strand, 13866516 - 13866248
Alignment:
Q  174 atttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagtta 271  Q
    |||||||||||| ||||||||||||||||| ||  |||||    |||||  |||| ||| |||| ||||||||||||| ||||||  |||| || ||||     
T  13866516 atttcagaggtatgacaattgttgtagttgaaaggtgcatt---ccctacctaatcacggtcttctggcggaatcaaactgttgagaatatcttcagttg 13866420  T
Q  272 atctcagcaacgttacccgcatatcgatcctgg--aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaa 369  Q
    ||||||||||||||||   |||||| ||||  |  |||||||||||||||||||||||| |||||||||  ||||||||  |||| |||| |||| ||||    
T  13866419 atctcagcaacgttacatacatatcaatccacggtaacatgttgtgctcccaaaacatgttcgtcacgtcgtcgtcgtttgttaattccatccaactgaa 13866320  T
Q  370 tgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||||| ||||| |  |||||| ||||||| | |||| ||||||||||||||| ||||||||||||    
T  13866319 tgatattctcccatcgtcaaatgttggacgtttataccaaacgcattccaccctccttgtgtctctggggtt 13866248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 20901436 - 20901335
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  || |||||||||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  20901436 aaggaaaaacatgaatgcgggacgaaatgcttgagtcat-gttgtttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaa 20901339  T
Q  207 tgca 210  Q
    ||||    
T  20901338 tgca 20901335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 27759774 - 27759875
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||||  ||||||||||||||| || | |||||||||| |||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  27759774 aaggaaaaacatgaacgcggggcgaaatgcttgagtcct-gttgtttggccagtttgaatttacccca-ttcaaaggtaagacaattgctgtagttggaa 27759871  T
Q  207 tgca 210  Q
    ||||    
T  27759872 tgca 27759875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 38132875 - 38132779
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| |  ||| ||||||||||| |||| |||||||||||||||||||||  |||  |||| ||||||||||||||||||||||| ||||||    
T  38132875 aaaacatgaatgcggggtgaaatgcttgagtcat-gttgtttggcaagtttgaatttgccccattcaaaggtaagacaattgttgtagttgaaatgca 38132779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 17211773 - 17211829
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 202  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17211773 tgttgtttagcaagtttgaatttaccccatttcagaggtaagacaattgttgtagtt 17211829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 51427948 - 51427858
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||| || ||||||||||||||| || | ||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||    
T  51427948 aaaacatgaatgtcgggcgaaatgcttgagtcct-gttgtttggcaagtttgaatttaccccatt-caaaggtaacacaattgttgtagttgg 51427858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 25763045 - 25763146
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  ||||||||||||||| || |||||||||| ||||||||| || ||||||||  | ||||||||||||||||| ||||||||    
T  25763045 aaggaaaaacatgaatgcggggcgaaatgcttgagtc-ttgttgtttgacaagtttgactttaccccattcga-aggtaagacaattgttggagttggaa 25763142  T
Q  207 tgca 210  Q
    ||||    
T  25763143 tgca 25763146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 45939972 - 45940073
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttga-attaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  ||||||||||||||| ||  |||||||||||||||||||  ||||| || |||  ||||||||||||||||||||||||||    
T  45939972 aaggaaaaacatgaatgcggggcgaaatgcttgagtc-ctgttgtttggcaagtttgactttacctca-ttcgaaggtaagacaattgttgtagttggaa 45940069  T
Q  207 tgca 210  Q
    ||||    
T  45940070 tgca 45940073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 206
Target Start/End: Complemental strand, 14330455 - 14330358
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| || ||||||||||||||| || |  ||||||| | ||||||||||| ||   |||| ||||||||||||||||||||||||||    
T  14330455 aaggaaaaacatgaatgtcgggcgaaatgcttgagtccta-ttgtttgaccagtttgaattaacctcattcaaaggtaagacaattgttgtagttggaa 14330358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 21711981 - 21712077
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| || ||| ||||||||||| | | |||||||||||| ||||||||| ||| |||| || ||||||||||||||||||||||||||||||    
T  21711981 aaaacatgaatgtcgggtgaaatgcttgagt-actgttgtttggcacgtttgaatttacctcatt-caaaggtaagacaattgttgtagttggaatgca 21712077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 39589379 - 39589475
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||| || | | |||||| |||| || ||||||||||||||||||||||| |||||| |||| ||||||||||||||||| ||||||||||||    
T  39589379 aaaacatgaatgtcgtgtgaaatgtttgagtc-ttgttgtttggcaagtttgaattgacccca-ttcaaaggtaagacaattgttgaagttggaatgca 39589475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 172 - 301
Target Start/End: Original strand, 49817150 - 49817277
Alignment:
Q  172 ccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagt 269  Q
    ||||||||| |||||||||||| ||||||||||||  |||||    |||||  |||| ||||||||||||| |||||| | ||||||| |||| || | |    
T  49817150 ccatttcag-ggtaagacaattattgtagttggaaggtgcatt---ccctacctaatcacgatcttttggcagaatcagactgttgataatatcttcatt 49817245  T
Q  270 taatctcagcaacgttacccgcatatcgatcc 301  Q
    | |||||| ||||||||| |||||||||||||    
T  49817246 tgatctcatcaacgttacacgcatatcgatcc 49817277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 18413073 - 18413134
Alignment:
Q  146 ttgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||| ||||||||||||| |||  ||||||||||||||| |||||||||||||||||    
T  18413073 ttgttgtttagcaagtttgaatttacctaatttcagaggtaagataattgttgtagttggaa 18413134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 433
Target Start/End: Original strand, 21412647 - 21412740
Alignment:
Q  341 tcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctc 433  Q
    ||||||||| |||| |||| |||| | ||||||| ||||||||||| || | ||||| ||||||| || ||||||||||||||||||| |||||    
T  21412647 tcgtcgttcgttaattccatccaactaaatgatattctcccctcgttgaacattggacgtttataccggacgtattccaccctccttgtgtctc 21412740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 49817363 - 49817307
Alignment:
Q  150 tgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||    
T  49817363 tgtttggcaagtttgaatttaccccatt-caggggtaagacaattgttgtagttggaa 49817307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 210
Target Start/End: Original strand, 37866891 - 37866954
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||| |||||||||||| |||||| |||| ||||||||||||||||| ||||||||||||    
T  37866891 tgttgtttgacaagtttgaattgacccca-ttcaaaggtaagacaattgttgcagttggaatgca 37866954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 46816262 - 46816184
Alignment:
Q  131 gaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||||| || ||||||||| ||||||||||||| ||| |||| || |||||||||||||||||||||| |||||||    
T  46816262 gaaatgcttgagtc-ttgttgtttcgcaagtttgaatttacctcatt-caaaggtaagacaattgttgtagttagaatgca 46816184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 242194 - 242105
Alignment:
Q  111 gaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttg-aattaccccatttcagaggtaagacaattgttgtagtt 202  Q
    ||||||||| || || || | |||||||||| |||| ||||||||||||||||| |||||||||  |||| |||||| |||||||||||||||    
T  242194 gaaaaacataaatgtcggacaaaatgcttgagtcat-gttgtttggcaagtttgaaattacccc--ttcaaaggtaacacaattgttgtagtt 242105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 202
Target Start/End: Original strand, 21411842 - 21411879
Alignment:
Q  165 aattaccccatttcagaggtaagacaattgttgtagtt 202  Q
    |||||||||||||||||||||||| |||||||||||||    
T  21411842 aattaccccatttcagaggtaagataattgttgtagtt 21411879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 42886753 - 42886809
Alignment:
Q  150 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||    
T  42886753 tgtttggcaagtttgaatttacccca-ttcagaggtaacacaattgttggagttggaa 42886809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 26591632 - 26591581
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  26591632 ttggcaagtttgaatttaccccatt-caaaggtaagacaattgttgtagttgg 26591581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 49423364 - 49423410
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 205  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  49423364 caagtttgaattaccccatt-cagagg-aagacaattgttgtagttgga 49423410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 51027527 - 51027437
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgta 199  Q
    ||||||||| ||||| |  ||| ||||||||||| || | ||||||| ||||||||||||| |||||||| || |||||||||||||||||||    
T  51027527 aaggaaaaatatgaatgcggggtgaaatgcttgagtcct-gttgttttgcaagtttgaatttaccccatt-caaaggtaagacaattgttgta 51027437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 21411601 - 21411566
Alignment:
Q  167 ttaccccatttcagaggtaagacaattgttgtagtt 202  Q
    |||||||||||||||||||||| |||||||||||||    
T  21411601 ttaccccatttcagaggtaagataattgttgtagtt 21411566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 56139375 - 56139456
Alignment:
Q  128 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| |||||||||||||||||||||||    
T  56139375 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtagttggaatgca 56139456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 885320 - 885354
Alignment:
Q  176 ttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||| ||||||||||||||||||||||||||||||    
T  885320 ttcaaaggtaagacaattgttgtagttggaatgca 885354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 31824389 - 31824305
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaatt 193  Q
    |||||||||||||||||  ||||||||||||||| ||  |||| |||||| |||||||| ||||| || |||| |||||||||||||    
T  31824389 aaggaaaaacatgaacgcggggcgaaatgcttgagtc-ctgttatttggccagtttgaatttacctca-ttcaaaggtaagacaatt 31824305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 49064431 - 49064523
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||| || ||| |||| |||||| || | ||||||||||||||||||||| | | |||| || |||||| |||||||||||||||||||    
T  49064431 aaaacatgaatgtcgggtgaaacgcttgagtcct-gttgtttggcaagtttgaatttatctcatt-caaaggtaacacaattgttgtagttggaa 49064523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 13855022 - 13855075
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgta 199  Q
    ||||||||  |||||||||||| | || ||||||||||||||||||||||||||    
T  13855022 tgttgtttaacaagtttgaatttatccaatttcagaggtaagacaattgttgta 13855075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 24607211 - 24607271
Alignment:
Q  146 ttgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||||||||| ||||| || |||| |||||||| ||||||| |||||||||    
T  24607211 ttgttgtttggcaagtttgaatttacctca-ttcaaaggtaagataattgttttagttggaa 24607271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 31324703 - 31324756
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgta 199  Q
    |||| ||| ||||||||||||| | |||||||||||||||| ||||||||||||    
T  31324703 tgttatttagcaagtttgaatttatcccatttcagaggtaacacaattgttgta 31324756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 2773609 - 2773563
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 205  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  2773609 caagtttgaattacccca-ttcagagg-aagacaattgttgcagttgga 2773563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 9717840 - 9717868
Alignment:
Q  174 atttcagaggtaagacaattgttgtagtt 202  Q
    |||||||||||||||||||||||||||||    
T  9717840 atttcagaggtaagacaattgttgtagtt 9717868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 22437401 - 22437452
Alignment:
Q  153 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||||||||    
T  22437401 ttggcaagtttgaatttacccca-ttcaaaggtaacacaattgttgtagttgg 22437452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 34529403 - 34529449
Alignment:
Q  157 caagtttgaattaccccatttcagaggtaagacaattgttgtagttgga 205  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||||    
T  34529403 caagtttgaattgccccatt-cagagg-aagacaattgttgtagttgga 34529449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 49791653 - 49791602
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||||||||| |||||||| || ||||||| ||||||||||||||||    
T  49791653 ttggcaagtttgaatttaccccatt-caaaggtaagccaattgttgtagttgg 49791602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 108 - 417
Target Start/End: Original strand, 35058620 - 35058932
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| || | |||||||||| ||  | | |  |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  35058620 aaggaaaaacatgaatgtcgagcgaaatgctagagccctggccgtttggcaagtttgaattacccaatttgagaggtaagacaattgttgtagttggaat 35058719  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    | | |||||||||| ||||||||||||| | | ||||| ||  |||||||||||| ||||||| |||||||||||||||||||||||||||||  |||||    
T  35058720 gtaccttaccctaactaatgacgatcttcttgtggaattaagatgttgatgatatctttagttgatctcagcaacgttacccgcatatcgatccactgga 35058819  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat- 404  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  35058820 acatgttgtgctcccaaaacatgctcgtaacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttata 35058919  T
Q  405 acgaacgtattcc 417  Q
    |||||||||||||    
T  35058920 acgaacgtattcc 35058932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 108 - 439
Target Start/End: Complemental strand, 801487 - 801156
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||||| || | |  |||| |||||||||||||||| |||| || ||| |||||||||||||||||||||||    
T  801487 aaggaaaaacatgaatgccgagcgaaatgcttgagtcttggccgtttcgcaagtttgaattacctcatt-caaagg-aagacaattgttgtagttggaat 801390  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| |||||||||||||||  |||||    
T  801389 gcaccttaccctaactaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactgga 801290  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| ||||| |||||||    
T  801289 acatgctgtgctcccaaaacatggtcgtcacgttttcgtcgttctttaactctacccaagtgaatgacac-ctcccctcgtcgagctttggacgtttata 801191  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggt 439  Q
     | |||||||||||||||||||| |||||||||||    
T  801190 ccaaacgtattccaccctccttgtgtctctggggt 801156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 29108463 - 29108129
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| | | |||| ||  | ||||| |||||||| ||||||||    
T  29108463 aaggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatctcatt-caacgataagaaaattgttgcagttggaa 29108366  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||||||| ||||||||||||| |||||||||||| |||||||| |||| || |||| ||||||||||||| ||||||||||||||||  |||    
T  29108365 tgcaccttaccctaactaatgacgatcttctggcggaatcaagttgttgatcatatcttcagttgatctcagcaacgtcacccgcatatcgatccactgg 29108266  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||| |||||||||||||||||||| ||||||||||||||||  |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  29108265 aacatgctgtgctcccaaaacatgctcttcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttat 29108166  T
Q  405 acga-acgtattccaccctccttgcgtctctggggtt 440  Q
    || | | || |||||||||||||| ||||||||||||    
T  29108165 accacaggtgttccaccctccttgtgtctctggggtt 29108129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 29066876 - 29066542
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| |   |||| || || ||||| |||||||| ||||||||    
T  29066876 aaggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatatcatt-caaagataagaaaattgttgcagttggaa 29066779  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||||||| ||||||||||||  |||||||||||| |||||||| |||| || |||| ||||||||||| | ||||||||||||||||  |||    
T  29066778 tgcaccttaccctaactaatgacgatctactggcggaatcaagttgttgatcatatcttcagttgatctcagcaacatcacccgcatatcgatccactgg 29066679  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||| |||||||||||||||||||| ||||||||||||||||  |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  29066678 aacatgctgtgctcccaaaacatgctcttcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttat 29066579  T
Q  405 a-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||| || |||||||||||||| ||||||||||||    
T  29066578 accgaaggtgttccaccctccttgtgtctctggggtt 29066542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 29075889 - 29075555
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| | | |||| ||  | ||||| |||||||| ||||||||    
T  29075889 aaggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatctcatt-caacgataagaaaattgttgcagttggaa 29075792  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||||||| ||||||||||||  |||||||||||| |||||||| |||| || |||| ||||||||||| | ||||||||||||||||  |||    
T  29075791 tgcaccttaccctaactaatgacgatctgctggcggaatcaagttgttgatcatatcttcagttgatctcagcaacatcacccgcatatcgatccactgg 29075692  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||| |||||||||||||||||||| ||||||||||||||||  |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  29075691 aacatgctgtgctcccaaaacatgctcttcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttat 29075592  T
Q  405 a-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    | |||| || |||||||||||||| ||||||||||||    
T  29075591 accgaaggtgttccaccctccttgtgtctctggggtt 29075555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 129 - 440
Target Start/End: Complemental strand, 27640480 - 27640169
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| ||||||| |||||||||||||||||| |||||||||| ||||||    
T  27640480 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aagacaaatgttgtagttggaatgcaccttaccctaactaatga 27640384  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||| ||||||||    
T  27640383 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgcttccaaaaca 27640284  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| | || || ||||||| ||||    
T  27640283 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagcgttggacgtttataccaaatgtgttccaccatcct 27640184  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  27640183 tgtgtctctggggtt 27640169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 151 - 440
Target Start/End: Complemental strand, 13402815 - 13402522
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||| |||||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  13402815 gtttggcaagtttgaattaccccatt-caaagg-aagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatcttctggcggaatca 13402718  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    |||| |||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||    
T  13402717 aatttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactggaacatgttgggctcccaaaacatgctcgtcacgttttcgtc 13402618  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||| ||||| ||||||||||| ||||||||||||||||||||||||  ||||||| |||||| |||||||||||||| ||||||||||||    
T  13402617 gttcgttaattccactcaagtgaatgaaactctcccctcgtcgagcgttggacatttatacagaacgtgttccaccctccttgtgtctctggggtt 13402522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 129 - 440
Target Start/End: Complemental strand, 6205784 - 6205473
Alignment:
Q  129 gcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatga 228  Q
    ||||||||||||| || | |||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||    
T  6205784 gcgaaatgcttgagtcct-gttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatga 6205688  T
Q  229 cgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaaca 326  Q
    ||||||| ||||||||||||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  ||||||||| |||||||||||||||    
T  6205687 cgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgctgtgctcccaaaaca 6205588  T
Q  327 tgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctcct 425  Q
    || |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||| | || || ||||||| ||||    
T  6205587 tggtcgtcacgttttcgtcgttcgttaattccacccaactgaatgatactctcccctcgtcgagtgttggacgtttataccaaatgtgttccaccatcct 6205488  T
Q  426 tgcgtctctggggtt 440  Q
    || ||||||||||||    
T  6205487 tgtgtctctggggtt 6205473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 29110861 - 29110526
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  | ||||||||||||| |||| ||||||||||| ||||||||| | | |||| ||  | ||||| |||||||| ||||||||    
T  29110861 aaggaaaaacatgaatgccgagcgaaatgcttgagtcat-gttgtttggcaggtttgaatttatctcatt-caacgataagaaaattgttgcagttggaa 29110764  T
Q  207 tgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tgg 304  Q
    |||| |||||||||| ||||||||||||  |||||||||||| |||||||| |||| || |||| ||||||||||| | ||||||||||||||||  |||    
T  29110763 tgcaccttaccctaactaatgacgatctgctggcggaatcaagttgttgatcatatcttcagttgatctcagcaacatcacccgcatatcgatccactgg 29110664  T
Q  305 aacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttat 404  Q
    |||||| |||||||||||||||||||| ||||||||||||||||  |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  29110663 aacatgctgtgctcccaaaacatgctcttcacgttttcgtcgtttgttaattccacccaagtgaatgaaactctcccctcgtcgagcgttggacgtttat 29110564  T
Q  405 a-cgaacgtattccaccc-tccttgcgtctctggggtt 440  Q
    | |||| || |||||||| |||||| ||||||||||||    
T  29110563 accgaaggtgttccacccatccttgtgtctctggggtt 29110526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 147 - 440
Target Start/End: Complemental strand, 11692734 - 11692440
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| ||||||||||||||| |||| || ||| || |||| |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  11692734 tgttgtttgacaagtttgaattacctcatt-caaagg-aatacaaatgttgtagttggaatgcaccttaccctaactaatgacgatcttgtggcggaatc 11692637  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgt 344  Q
    ||| | |||||||||| || |||| |||| |||||| | ||||||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||    
T  11692636 aaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactggaacatgttgtgcttccaaaacatgttcgtcacgttttcgt 11692537  T
Q  345 cgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||| |||| ||||||||| |||||||||||||||||| |||||| |||||| ||||||| | || || ||||||| |||||| |||||| |||||    
T  11692536 cgttcgttaattccacccaactgaatgatactctccccttgtcgagtgttggacgtttataccaaatgtgttccaccatccttgtgtctctcgggtt 11692440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 151 - 440
Target Start/End: Original strand, 32027555 - 32027848
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    |||||||| ||||||||||||||||| || ||| |||||||||||||||| |||||  ||||| | | || ||  ||||||||||||| |||||||||||    
T  32027555 gtttggcatgtttgaattaccccatt-caaagg-aagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatcttctggcggaatca 32027652  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || |||| ||||||||||||| ||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  32027653 aacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatccactagaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 32027752  T
Q  346 gttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||| |||| ||||||||||||||||||||||||||||||||||  |||||| ||||||| ||||||| ||| |||||||||| ||||||||||||    
T  32027753 attcgttaattccacccaagtgaatgatactctcccctcgtcgaatgttggacgtttataccgaacgtgttcaaccctccttgtgtctctggggtt 32027848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 223 - 440
Target Start/End: Complemental strand, 12396985 - 12396765
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    |||||||||||||||||||||||||| ||||||||||||| || |||  ||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  12396985 taatgacgatcttttggcggaatcaagttgttgatgatatcttcagtagatctcagcaacgttacccgcatatcgatccactggaacatgctgtgctccc 12396886  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| ||| || ||||||| |||||||  |||||    
T  12396885 aaaacatgctcgtcatgttttcgtcgttcgttaattccacccaattgaatgatactctcccctcgtcgagtgttagacgtttataccgaacgtgctccac 12396786  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||  ||||||||||||    
T  12396785 cctccttatgtctctggggtt 12396765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 223 - 437
Target Start/End: Original strand, 34802896 - 34803113
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctggaacatgttgtgctccc 320  Q
    ||||||||||||||||||| ||||||| | |||||||||| || |||| ||||||||||||| ||||||||||||||   ||||||||||||||||||||    
T  34802896 taatgacgatcttttggcgaaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatttactggaacatgttgtgctccc 34802995  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
      ||||||||| ||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  34802996 tgaacatgctcatcacgttttcgtcgttcgttaattccacccaagtcaatgatactctcccctcgtcgagcgttggacgtttataccgaacgtgttccac 34803095  T
Q  420 cctccttgcgtctctggg 437  Q
    |||||||| |||||||||    
T  34803096 cctccttgtgtctctggg 34803113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 153 - 433
Target Start/End: Complemental strand, 14115313 - 14115033
Alignment:
Q  153 ttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    |||||||||||||||||||| |||| | ||| ||||||||||||||||||||||  |||||    |||||  |||| || ||||| |||| |||||| |     
T  14115313 ttggcaagtttgaattaccctatttaa-agg-aagacaattgttgtagttggaaggtgcatt---ccctacctaatcactatcttctggcagaatcagac 14115219  T
Q  251 tgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgtt 348  Q
    | |||||||||| || |||| |||||| ||||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||    
T  14115218 tcttgatgatatcttcagttgatctcaacaacgttacccgcatattgatccactggaacatgttgtgctcccagaacatgctcgtcacgttttcgtcgtt 14115119  T
Q  349 ctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttatac-gaacgtattccaccctccttgcgtctc 433  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| || ||||||||||| |||||    
T  14115118 ctttacttccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttatactgaacgttttgcaccctccttgtgtctc 14115033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 223 - 440
Target Start/End: Original strand, 32037687 - 32037907
Alignment:
Q  223 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctccc 320  Q
    ||||||||||||| ||||||||||||| | |||||||||| || |||| ||||||||||||| ||||||||||| ||||  | |||||||||||||||||    
T  32037687 taatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatccactagaacatgttgtgctccc 32037786  T
Q  321 aaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccac 419  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||  |||||| ||||||| ||||||| ||| ||    
T  32037787 aaaacatgctcgtcacgttttcgtcattcgttaattccacccaagtgaatgatactctcccctcgtcgaatgttggacgtttataccgaacgtgttcaac 32037886  T
Q  420 cctccttgcgtctctggggtt 440  Q
    |||||||| ||||||||||||    
T  32037887 cctccttgtgtctctggggtt 32037907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 253 - 440
Target Start/End: Complemental strand, 22305975 - 22305785
Alignment:
Q  253 ttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttct 350  Q
    |||||||||| || |||| |||| | |||| | ||||||||||||||||  ||||||||||||||||||||||||||| |||| |||||||||||||||     
T  22305975 ttgatgatatcttcagttgatctaaccaacttcacccgcatatcgatccactggaacatgttgtgctcccaaaacatggtcgtgacgttttcgtcgttcg 22305876  T
Q  351 ttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||| |||||| |||| |||||||    
T  22305875 ttaattccacccaagtgaatgatactctcccctcgtcgagcgttggacgtttataccaaacgtgttccaccatccttgtgtctttggggtt 22305785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 151 - 371
Target Start/End: Original strand, 30257506 - 30257729
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||  ||||| | | |  ||  ||||||||||||| | |||||||||    
T  30257506 gtttggcaagtttgaattaccccattt-agagg-aagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatcttctagcggaatca 30257603  T
Q  248 aattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc--tggaacatgttgtgctcccaaaacatgctcgtcacgttttcgtc 345  Q
    || | |||||||||| || | || ||||||||||||| |||| |||||||||||  | ||||||| ||||||||||||||||||||||||||||||||||    
T  30257604 aacttttgatgatatcttcaattgatctcagcaacgtcacccacatatcgatccactagaacatgatgtgctcccaaaacatgctcgtcacgttttcgtc 30257703  T
Q  346 gttctttaactccacccaagtgaatg 371  Q
    ||||||||| ||||||||| ||||||    
T  30257704 gttctttaattccacccaactgaatg 30257729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 108 - 301
Target Start/End: Original strand, 3765672 - 3765866
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | || |||||||||| || | |  ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  3765672 aaggaaaaacatgaatgccgagccaaatgcttgagtcctggccgtttggcaagtttgaattaccccatttgagaggtaagacaattgttgcagttggaat 3765771  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaa-tcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatcc 301  Q
    ||| |||||||||| |||||| |||||| ||| |||| | ||| | |||||||||| || |||| ||||||||||||| ||||||||||||||||    
T  3765772 gcaccttaccctaactaatgatgatcttctggtggaatttaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatcc 3765866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 24021023 - 24021168
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| |||||||||| || ||||||||||    
T  24021023 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgattttatggcggaatc 24021120  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcata 294  Q
    ||| | |||||||||| || |||| |||| |||||| | |||||||||    
T  24021121 aaacttttgatgatatcttaagttgatctaagcaacttcacccgcata 24021168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 2192680 - 2192535
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||| | |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| |||||||||| || ||||||||||    
T  2192680 tgttgttcgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgattttatggcggaatc 2192583  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcata 294  Q
    ||| | |||||||||| || |||| |||| |||||| | |||||||||    
T  2192582 aaaattttgatgatatcttaagttgatctaagcaacttcacccgcata 2192535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 256
Target Start/End: Complemental strand, 34134935 - 34134827
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcatcttaccctaattaatgacgatcttttggcggaa 244  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| ||  ||||   | |||||  |||| |||||||||| ||||||    
T  34134935 tgttgtttagcaagtttgaattattccatttcagaggtaagacaattgttgtagttgaaaggtgca---ttccctacctaatcacgatcttttagcggaa 34134839  T
Q  245 tcaaattgttga 256  Q
    ||||| ||||||    
T  34134838 tcaaactgttga 34134827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 17465287 - 17465413
Alignment:
Q  174 atttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaat 273  Q
    ||||||||||||||||||||||||||||||||| |  | || | |||  |||| |||||||||||||||||||||| ||||||  |||| || |||| ||    
T  17465287 atttcagaggtaagacaattgttgtagttggaaggtgtatt-ctctacctaatcacgatcttttggcggaatcaaactgttgagaatatcttcagttgat 17465385  T
Q  274 ctcagcaacgttacccgcatatcgatcc 301  Q
    ||| ||||||| ||   |||||||||||    
T  17465386 ctctgcaacgtgacaaacatatcgatcc 17465413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 35058456 - 35058393
Alignment:
Q  147 tgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||||  |||||||||| |||||||| || ||||||||||||||||||||||||||||||    
T  35058456 tgttgtttggagagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaatgca 35058393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 801618 - 801710
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||| |  ||||||||||||||| || | || |||| || |||||||||| |||||||| || ||||||||||||||||||||||||||    
T  801618 aaaacatgaatgccgggcgaaatgcttgagtcct-gtcgttttgccagtttgaatttaccccatt-caaaggtaagacaattgttgtagttggaa 801710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 20192605 - 20192543
Alignment:
Q  145 attgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||| ||||||||||||| | || |||| ||||||| ||||||||||||||||||||    
T  20192605 attgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgtagttggaa 20192543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 20242049 - 20242111
Alignment:
Q  145 attgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||| ||||||||||||| | || |||| ||||||| ||||||||||||||||||||    
T  20242049 attgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgtagttggaa 20242111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 22136033 - 22136095
Alignment:
Q  145 attgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||| ||||||||||||| | || |||| ||||||| ||||||||||||||||||||    
T  22136033 attgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgtagttggaa 22136095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 22143386 - 22143448
Alignment:
Q  145 attgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||| ||||||||||||| | || |||| ||||||| ||||||||||||||||||||    
T  22143386 attgttgtttagcaagtttgaatttatccaatttaagaggtaggacaattgttgtagttggaa 22143448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 12397270 - 12397321
Alignment:
Q  153 ttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  12397270 ttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttgg 12397321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 14482746 - 14482806
Alignment:
Q  147 tgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||| ||||||||||| |||||| | |||||||| ||||||||||||||||| ||||    
T  14482746 tgttgtttagcaagtttgaaattacccaaattcagaggcaagacaattgttgtagtgggaa 14482806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 6205953 - 6206034
Alignment:
Q  128 ggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||||| || | ||||||| ||| ||||||||| | |||||| || |||||| |||||||||||||||||||||||    
T  6205953 ggcgaaatgcttgagtcct-gttgttttgcaggtttgaatttatcccatt-caaaggtaacacaattgttgtagttggaatgca 6206034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 262
Target Start/End: Original strand, 35021164 - 35021276
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa--tgcat-cttaccctaattaatgacgatcttttggcggaatca 247  Q
    ||||| |||||||||||||||||||| || ||| |||||||||||||||| |  ||  ||||| | | || || |||||||||||||| |||||||||||    
T  35021164 gtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagctaaaaggtgcattcattccgtacttaatgacgatcttctggcggaatca 35021261  T
Q  248 aattgttgatgatat 262  Q
    || | ||||||||||    
T  35021262 aacttttgatgatat 35021276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 4495397 - 4495446
Alignment:
Q  153 ttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagtt 202  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  4495397 ttggcaagtttgaattgacccca-ttcagaggtaacacaattgttgtagtt 4495446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 13403313 - 13403362
Alignment:
Q  157 caagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  13403313 caagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 13403362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 14123099 - 14123152
Alignment:
Q  157 caagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    |||||||||||| ||||||||| | ||||||||||||| ||||||||||||||||    
T  14123099 caagtttgaatttaccccatttaa-aggtaagacaatttttgtagttggaatgca 14123152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 14123421 - 14123470
Alignment:
Q  156 gcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||  |||||| |||||| ||||||||||||||||||||||    
T  14123421 gcaagtttgaatttgcccatt-cagaggcaagacaattgttgtagttggaa 14123470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 29067007 - 29067103
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||||||| | ||||||||||||| || | |||||||| || ||||||||| | | |||| || | ||||||||||||||| ||||||||||||    
T  29067007 aaaacatgaacgtcgagcgaaatgcttgagtcct-gttgtttgacaggtttgaatttatctcatt-caaatgtaagacaattgttgcagttggaatgca 29067103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 210
Target Start/End: Original strand, 29108594 - 29108690
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaatgca 210  Q
    ||||||||||||| | ||||||||||||| || | |||||||| || ||||||||| | | |||| || | ||||||||||||||| ||||||||||||    
T  29108594 aaaacatgaacgtcgagcgaaatgcttgagtcct-gttgtttgacaggtttgaatttatctcatt-caaatgtaagacaattgttgcagttggaatgca 29108690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 4495615 - 4495671
Alignment:
Q  150 tgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||| ||| ||||||||    
T  4495615 tgtttagcaagtttgaatttacccca-ttcagaggtaagacaattattgcagttggaa 4495671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 108 - 427
Target Start/End: Original strand, 17802 - 18123
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||| |  | ||||||||||||| || |    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  17802 aaggaaaaacatgaatgccgagcgaaatgcttgagtcctaaccgtttggcaagtttgaattatcccatttcagaggtaagacaattgttgtagttgaaat 17901  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||||||||||||  |||||||||||| || |||| |||||||||||||||||||||||||||||  ||  |    
T  17902 gcaccttaccctaactaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactata 18001  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||    
T  18002 acatgttgtgctcccaaaacatgctcatcacgttttcgtcgttctttaactccacccaagtgaatgatactct-ccctcgtcgagtgttggacgtttata 18100  T
Q  406 -cgaacgtattccaccctccttg 427  Q
     ||||||| ||||||||||||||    
T  18101 ccgaacgtgttccaccctccttg 18123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 17671 - 17581
Alignment:
Q  113 aaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttgg 204  Q
    |||||||||| |  ||||||||||||| | |||| ||||||||| |||||| |||| |||||||| || | |||| |||||||||||||||||    
T  17671 aaaacatgaatgccgggcgaaatgcttaagtcat-gttgtttggaaagtttaaatttaccccatt-caaaagtaacacaattgttgtagttgg 17581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 108 - 440
Target Start/End: Complemental strand, 2111 - 1777
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaat 207  Q
    ||||||||||||||||| ||| |||||||||||| |||| |  ||||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  2111 aaggaaaaacatgaacgctgg-cgaaatgcttgagtcatggccgtttgacaagtttgaattaccccaattcagaggtaagagaattgttgcagttggaat 2013  T
Q  208 gcatcttaccctaattaatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatc--ctgga 305  Q
    ||| |||||||||| ||||||||||||| ||||| ||||||| | |||||||||| || |||| ||||||||||||| |||||||||||||||  |||||    
T  2012 gcaccttaccctaactaatgacgatcttatggcgaaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactgga 1913  T
Q  306 acatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata 405  Q
    |||||||||||||||||||||||  ||||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1912 acatgttgtgctcccaaaacatgtccgtcacgttttcgtcgtttgttaattccacccaaatgaatgatactctcccctcgtcgagcgttggatgtttata 1813  T
Q  406 -cgaacgtattccaccctccttgcgtctctggggtt 440  Q
     ||||  | |||||||||||||| |||||| |||||    
T  1812 ccgaaattgttccaccctccttgtgtctctagggtt 1777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 2238 - 2339
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaatt-accccatttcagaggtaagacaattgttgtagttggaa 206  Q
    |||||||||||||||||  ||||||||| ||||| || | |||||| ||| |||||||||| || ||||| || ||||||||||||||||||||||| ||    
T  2238 aaggaaaaacatgaacgcggggcgaaatacttgagtcct-gttgttaggccagtttgaatttactccatt-caaaggtaagacaattgttgtagttgaaa 2335  T
Q  207 tgca 210  Q
    ||||    
T  2336 tgca 2339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 25029 - 24892
Alignment:
Q  304 gaacatgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgttta 403  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||||| |||||| |||||||||||| |||||||||| | || ||    
T  25029 gaacatgttgtgctcccaaaacatgctcgtcacattttcgttgttcgttaattccacccaactgaatgctactctcccctcctcgagcgttgtacgtcta 24930  T
Q  404 ta-cgaacgtattccaccctccttgcgtctctggggtt 440  Q
    || |||||||||||||||||||||| ||||| ||||||    
T  24929 taccgaacgtattccaccctccttgtgtctccggggtt 24892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 308 - 440
Target Start/End: Complemental strand, 64095 - 63963
Alignment:
Q  308 atgttgtgctcccaaaacatgctcgtcacgttttcgtcgttctttaactccacccaagtgaatgatactctcccctcgtcgagcgttggatgtttata-c 406  Q
    |||||||||||||||||||||||||||||||||||||||||| || | ||||| ||| ||||||||||||| |||| |||||||||||||  |||||| |    
T  64095 atgttgtgctcccaaaacatgctcgtcacgttttcgtcgttcattgattccactcaactgaatgatactct-cccttgtcgagcgttggacatttatacc 63997  T
Q  407 gaacgtattccaccctccttgcgtctctggggtt 440  Q
    ||||||  ||||||||||||| ||||||||||||    
T  63996 gaacgtgctccaccctccttgtgtctctggggtt 63963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 151 - 281
Target Start/End: Complemental strand, 64226 - 64098
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatcaaat 250  Q
    ||||||||||||||||||||  |||| || ||| |||||||||||||||||||||||| | |||||||||  ||||||||||||| ||| |||||||||     
T  64226 gtttggcaagtttgaattacttcatt-caaagg-aagacaattgttgtagttggaatgtaccttaccctacctaatgacgatcttctggtggaatcaaac 64129  T
Q  251 tgttgatgatatttttagttaatctcagcaa 281  Q
    | |||||||||| || |||| ||||||||||    
T  64128 ttttgatgatatcttcagttgatctcagcaa 64098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 85607 - 85462
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||| |||||||||| |||||||||| || |||| |||||    
T  85607 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcaccttaccctaactaatgacgattttatggctgaatc 85510  T
Q  247 aaattgttgatgatatttttagttaatctcagcaacgttacccgcata 294  Q
    ||| | |||||||||| || |||| |||| |||||| | |||||||||    
T  85509 aaacttttgatgatatcttaagttgatctaagcaacttcacccgcata 85462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 2402 - 2503
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatttcagaggtaagacaattgttgtagttggaa 206  Q
    ||||||||||||||| |  ||||||||||||||| || ||||| ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  2402 aaggaaaaacatgaatgccgggcgaaatgcttgagtc-ttgttttttggcaagtttgaatttacccca-ttcaaaggtaagacaattgttgtagttggaa 2499  T
Q  207 tgca 210  Q
    ||||    
T  2500 tgca 2503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 2233 - 2200
Alignment:
Q  151 gtttggcaagtttgaattaccccatttcagaggt 184  Q
    |||||| |||||||||||||||||||||||||||    
T  2233 gtttggaaagtttgaattaccccatttcagaggt 2200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 147 - 282
Target Start/End: Complemental strand, 14749 - 14616
Alignment:
Q  147 tgttgtttggcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatgcatcttaccctaattaatgacgatcttttggcggaatc 246  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||||||||||  ||||||||| ||| ||||||||| |||||| |||    
T  14749 tgttgtttgacaagtttgaattaccccatt-caaagg-aagacaattgttgtagttggaatgcacgttaccctaactaacgacgatcttatggcggtatc 14652  T
Q  247 aaattgttgatgatatttttagttaatctcagcaac 282  Q
    | | | ||||||| || || |||| |||| ||||||    
T  14651 atacttttgatgaaatcttaagttgatctaagcaac 14616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 1169 - 1199
Alignment:
Q  172 ccatttcagaggtaagacaattgttgtagtt 202  Q
    |||||||||||||||||||||||||||||||    
T  1169 ccatttcagaggtaagacaattgttgtagtt 1199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1700 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold1700
Description:

Target: scaffold1700; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 46 - 114
Alignment:
Q  108 aaggaaaaacatgaacgttgggcgaaatgcttgaatcattgttgtttggcaagtttgaa-ttaccccatt 176  Q
    ||||||||||||||| || ||||||||||||||| ||  |||||||| || |||||||| ||||||||||    
T  46 aaggaaaaacatgaatgtcgggcgaaatgcttgagtc-ctgttgtttcgccagtttgaatttaccccatt 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1700; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 384 - 436
Alignment:
Q  156 gcaagtttgaattaccccatttcagaggtaagacaattgttgtagttggaatg 208  Q
    |||||||||||||  |||  ||||| || ||||||||||||||||||||||||    
T  384 gcaagtttgaatttgccccattcaggggcaagacaattgttgtagttggaatg 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University