View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13789_high_6 (Length: 582)

Name: NF13789_high_6
Description: NF13789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13789_high_6
NF13789_high_6
[»] chr6 (30 HSPs)
chr6 (24-560)||(13210883-13211422)
chr6 (441-485)||(17168887-17168931)
chr6 (441-480)||(2140503-2140542)
chr6 (436-491)||(15443682-15443737)
chr6 (436-493)||(6299497-6299554)
chr6 (436-493)||(6306307-6306364)
chr6 (448-493)||(10760870-10760915)
chr6 (436-492)||(7625108-7625164)
chr6 (433-492)||(12086359-12086418)
chr6 (433-491)||(9024190-9024248)
chr6 (169-306)||(13184900-13185037)
chr6 (443-524)||(34073371-34073452)
chr6 (437-477)||(29711263-29711303)
chr6 (439-483)||(33141253-33141297)
chr6 (445-492)||(7086781-7086828)
chr6 (445-492)||(8805598-8805645)
chr6 (433-472)||(34446571-34446610)
chr6 (436-514)||(426531-426609)
chr6 (433-471)||(29049892-29049930)
chr6 (434-471)||(4859128-4859165)
chr6 (434-467)||(10157995-10158028)
chr6 (169-306)||(13157125-13157262)
chr6 (169-306)||(13161981-13162118)
chr6 (434-470)||(6284676-6284712)
chr6 (67-123)||(13184804-13184860)
chr6 (445-485)||(17422281-17422321)
chr6 (434-486)||(19369809-19369861)
chr6 (433-473)||(19602195-19602235)
chr6 (433-492)||(28862107-28862167)
chr6 (441-473)||(32299280-32299312)
[»] chr4 (29 HSPs)
chr4 (433-491)||(10546135-10546193)
chr4 (433-486)||(5654605-5654658)
chr4 (443-493)||(7012051-7012101)
chr4 (433-472)||(14465308-14465347)
chr4 (433-472)||(18513255-18513294)
chr4 (443-514)||(24343471-24343542)
chr4 (433-491)||(20743292-20743350)
chr4 (441-478)||(43188612-43188649)
chr4 (433-493)||(34589720-34589780)
chr4 (433-493)||(12310798-12310860)
chr4 (436-491)||(19230326-19230381)
chr4 (433-480)||(31243562-31243609)
chr4 (433-472)||(43299985-43300024)
chr4 (433-472)||(43300622-43300661)
chr4 (441-491)||(8820395-8820445)
chr4 (437-471)||(25390904-25390938)
chr4 (434-492)||(37496690-37496748)
chr4 (433-470)||(2976702-2976739)
chr4 (436-477)||(5176985-5177026)
chr4 (443-472)||(32910557-32910586)
chr4 (442-471)||(48845148-48845177)
chr4 (434-479)||(51673457-51673502)
chr4 (434-470)||(8457933-8457969)
chr4 (433-469)||(11110212-11110248)
chr4 (434-486)||(15969345-15969397)
chr4 (443-523)||(21945458-21945538)
chr4 (436-468)||(26276026-26276058)
chr4 (443-491)||(34515898-34515946)
chr4 (446-478)||(41297391-41297423)
[»] chr8 (33 HSPs)
chr8 (433-486)||(9936806-9936859)
chr8 (441-492)||(34739083-34739134)
chr8 (445-521)||(20873027-20873102)
chr8 (441-491)||(5307048-5307097)
chr8 (433-470)||(29198493-29198530)
chr8 (435-472)||(30068044-30068081)
chr8 (436-497)||(31236594-31236655)
chr8 (436-489)||(34201063-34201116)
chr8 (446-503)||(44067491-44067548)
chr8 (433-473)||(3508057-3508097)
chr8 (454-514)||(3658111-3658171)
chr8 (436-504)||(22651950-22652018)
chr8 (437-481)||(33697159-33697203)
chr8 (433-492)||(7616863-7616922)
chr8 (443-522)||(14134661-14134734)
chr8 (428-471)||(40063958-40064001)
chr8 (441-492)||(45321968-45322019)
chr8 (436-470)||(8798848-8798882)
chr8 (433-471)||(12985399-12985437)
chr8 (438-472)||(14230063-14230097)
chr8 (433-471)||(16230104-16230142)
chr8 (434-492)||(26915255-26915313)
chr8 (443-493)||(34897070-34897120)
chr8 (433-471)||(37225757-37225795)
chr8 (445-486)||(12936517-12936558)
chr8 (436-521)||(29775994-29776078)
chr8 (434-491)||(42874509-42874566)
chr8 (440-472)||(4114224-4114256)
chr8 (436-468)||(10441213-10441245)
chr8 (433-469)||(16869729-16869765)
chr8 (434-486)||(27547987-27548039)
chr8 (443-471)||(28883902-28883930)
chr8 (437-485)||(34259813-34259861)
[»] chr7 (30 HSPs)
chr7 (436-524)||(19206004-19206092)
chr7 (446-521)||(43249950-43250025)
chr7 (445-522)||(4017820-4017897)
chr7 (434-474)||(44172905-44172945)
chr7 (433-472)||(2525858-2525897)
chr7 (443-518)||(11722122-11722197)
chr7 (432-479)||(28943427-28943474)
chr7 (433-472)||(38134420-38134459)
chr7 (443-524)||(12289068-12289149)
chr7 (435-493)||(30516373-30516431)
chr7 (434-472)||(35238199-35238237)
chr7 (420-469)||(41229299-41229348)
chr7 (434-486)||(9050148-9050200)
chr7 (433-473)||(21247750-21247790)
chr7 (454-486)||(33887022-33887054)
chr7 (453-492)||(953682-953721)
chr7 (434-469)||(18678157-18678192)
chr7 (449-520)||(28401102-28401172)
chr7 (434-492)||(36013813-36013872)
chr7 (448-486)||(927866-927904)
chr7 (434-492)||(5937436-5937494)
chr7 (433-471)||(36314641-36314679)
chr7 (437-471)||(41099759-41099793)
chr7 (434-467)||(12843049-12843082)
chr7 (444-493)||(17780109-17780158)
chr7 (433-486)||(23930211-23930264)
chr7 (445-494)||(24977411-24977460)
chr7 (434-471)||(30013202-30013239)
chr7 (443-503)||(26733279-26733339)
chr7 (443-479)||(30813811-30813847)
[»] chr5 (24 HSPs)
chr5 (433-485)||(41600891-41600943)
chr5 (443-522)||(21137645-21137724)
chr5 (433-485)||(11596469-11596521)
chr5 (443-514)||(6326321-6326392)
chr5 (433-488)||(16434396-16434451)
chr5 (433-492)||(18607111-18607170)
chr5 (433-491)||(2039863-2039921)
chr5 (441-486)||(16864010-16864055)
chr5 (443-492)||(25863190-25863239)
chr5 (441-486)||(28296320-28296365)
chr5 (434-503)||(30080516-30080585)
chr5 (433-478)||(37472611-37472656)
chr5 (433-473)||(40211961-40212001)
chr5 (443-514)||(13287423-13287494)
chr5 (436-491)||(38749580-38749635)
chr5 (433-472)||(43208288-43208327)
chr5 (455-485)||(2321923-2321953)
chr5 (436-470)||(22423829-22423863)
chr5 (434-471)||(16199300-16199337)
chr5 (436-485)||(23287366-23287415)
chr5 (433-514)||(26205774-26205855)
chr5 (433-470)||(31264446-31264483)
chr5 (441-478)||(32428948-32428985)
chr5 (442-471)||(41558706-41558735)
[»] scaffold0598 (1 HSPs)
scaffold0598 (443-493)||(8077-8127)
[»] scaffold0007 (1 HSPs)
scaffold0007 (436-514)||(225285-225363)
[»] chr1 (20 HSPs)
chr1 (434-492)||(26462660-26462718)
chr1 (436-513)||(1262849-1262926)
chr1 (433-486)||(3921659-3921712)
chr1 (433-485)||(7988465-7988517)
chr1 (435-472)||(11571591-11571628)
chr1 (436-472)||(40747790-40747826)
chr1 (433-468)||(2445880-2445915)
chr1 (443-522)||(9629924-9630002)
chr1 (433-492)||(40686772-40686831)
chr1 (438-472)||(48785283-48785317)
chr1 (433-470)||(609472-609509)
chr1 (443-504)||(2896145-2896206)
chr1 (433-486)||(19637760-19637813)
chr1 (433-470)||(30847734-30847771)
chr1 (443-472)||(42325566-42325595)
chr1 (434-466)||(14332420-14332452)
chr1 (433-481)||(20999605-20999653)
chr1 (446-514)||(22794105-22794173)
chr1 (443-522)||(36878417-36878496)
chr1 (434-474)||(43609833-43609873)
[»] chr3 (25 HSPs)
chr3 (446-514)||(24205068-24205136)
chr3 (433-491)||(20691306-20691364)
chr3 (433-479)||(52369774-52369820)
chr3 (434-491)||(46801744-46801801)
chr3 (436-492)||(41319327-41319383)
chr3 (433-492)||(8039192-8039251)
chr3 (441-472)||(9210847-9210878)
chr3 (433-472)||(12704671-12704710)
chr3 (443-522)||(14979138-14979216)
chr3 (433-464)||(15864259-15864290)
chr3 (434-481)||(19323463-19323510)
chr3 (433-472)||(40150585-40150624)
chr3 (434-472)||(21149073-21149111)
chr3 (456-498)||(21367248-21367290)
chr3 (428-486)||(25074781-25074839)
chr3 (435-473)||(25908855-25908893)
chr3 (443-517)||(28917962-28918036)
chr3 (445-486)||(5339100-5339141)
chr3 (436-473)||(13807174-13807211)
chr3 (443-472)||(16789674-16789703)
chr3 (445-482)||(19730235-19730272)
chr3 (420-473)||(27858345-27858398)
chr3 (434-491)||(42667607-42667664)
chr3 (445-477)||(19750825-19750857)
chr3 (434-486)||(34409357-34409409)
[»] chr2 (21 HSPs)
chr2 (433-472)||(18570978-18571017)
chr2 (445-479)||(24011035-24011069)
chr2 (443-524)||(30404874-30404954)
chr2 (434-478)||(10250726-10250770)
chr2 (436-472)||(40681988-40682024)
chr2 (433-472)||(10535773-10535812)
chr2 (433-492)||(12748670-12748729)
chr2 (436-483)||(19613630-19613677)
chr2 (433-488)||(30298461-30298516)
chr2 (441-472)||(30563415-30563446)
chr2 (433-472)||(31026701-31026740)
chr2 (436-491)||(37497107-37497162)
chr2 (434-472)||(16630801-16630839)
chr2 (434-492)||(43586020-43586078)
chr2 (433-486)||(2846923-2846976)
chr2 (441-477)||(2073943-2073979)
chr2 (433-473)||(4690295-4690335)
chr2 (433-492)||(18125605-18125665)
chr2 (443-503)||(21616737-21616797)
chr2 (443-491)||(21782842-21782890)
chr2 (445-513)||(23355021-23355089)
[»] scaffold0571 (1 HSPs)
scaffold0571 (441-473)||(7695-7727)
[»] scaffold0003 (1 HSPs)
scaffold0003 (445-524)||(241548-241627)
[»] scaffold0037 (1 HSPs)
scaffold0037 (436-477)||(102906-102947)
[»] scaffold0024 (1 HSPs)
scaffold0024 (435-492)||(18124-18181)
[»] scaffold0022 (1 HSPs)
scaffold0022 (436-492)||(99879-99935)


Alignment Details
Target: chr6 (Bit Score: 482; Significance: 0; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 24 - 560
Target Start/End: Original strand, 13210883 - 13211422
Alignment:
Q  24 tgtccgtcataacatgtgtctcacttgcaaacgcaggtatcaatgaaattagagggaagcatttaaactattccaaattctggaacgtagataataacaa 123  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13210883 tgtctgtcataacatgtgtctcccttgcaaacgcaggtatcaatgaagttagagggaagcatttaaactattccaaattctggaacgtagaaaataacaa 13210982  T
Q  124 tggtgataagaagaagaagaagatgataaaattgtcgagtaaaagtggtatgttattgttatatactcctgcttttgttgctggtgctgcgtcgtttttg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13210983 tggtgataagaagaagaagaagatgataaaattgtcgagtaaaagtggtatgttattgttgtatactcctgcttttgttgctggtgctgcgtcgtttttg 13211082  T
Q  224 gtgtttcctgatgatggttttagatctttggttcttcaaggtgctgttacgtttcatttcttcaagagagtttttgaggtaatgtatagcataaggttta 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211083 gtgtttcctgatgatggttttagatctttggttcttcaaggtgctgttacgtttcatttcttcaagagagtttttgaggtaatgtatagcataaggttta 13211182  T
Q  324 atgatacaagattaattgctcttttgtgttcgaaatttttatgttaaaatgtaatgttgtgaaggaccgacacgtgtcggtgt---acaccaacaccgag 420  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||    
T  13211183 atgatacaagattaattgcacttttgtgttcgaaatttttatgttaaaatgtaatgttgtgaagcaccgacacgtgtcggtgtctgacaccaacaccgag 13211282  T
Q  421 acaccggcgccgatgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcat 520  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13211283 acaccgacgccgatgattatattaaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtgtccgtgcttcat 13211382  T
Q  521 agatgtaatgcaatgtatgattttgaattgttggggagtt 560  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  13211383 acatgtaatgcaatgtatgattttgaattgttggggagtt 13211422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 441 - 485
Target Start/End: Complemental strand, 17168931 - 17168887
Alignment:
Q  441 attgaattatgtcattttctcaaattattatcaatgtcgacgtgt 485  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  17168931 attgaattatgtcattttttcaaattattatcaatgtcgacgtgt 17168887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 441 - 480
Target Start/End: Original strand, 2140503 - 2140542
Alignment:
Q  441 attgaattatgtcattttctcaaattattatcaatgtcga 480  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2140503 attgaattatgtcattttctcaaattattatcaatgtcga 2140542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 15443737 - 15443682
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||||||| ||||    
T  15443737 attatattgaattatgttattttctcaaattattattgatgtcgacgtgtcagtgt 15443682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 493
Target Start/End: Complemental strand, 6299554 - 6299497
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtcc 493  Q
    |||| |||||||||| ||||||||||||||||||||| |||||| ||||| |||||||    
T  6299554 attacattgaattatatcattttctcaaattattatccatgtcggcgtgttggtgtcc 6299497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 493
Target Start/End: Complemental strand, 6306364 - 6306307
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtcc 493  Q
    |||| |||||||||| ||||||||||||||||||||| |||||| ||||| |||||||    
T  6306364 attacattgaattatatcattttctcaaattattatccatgtcggcgtgttggtgtcc 6306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 448 - 493
Target Start/End: Original strand, 10760870 - 10760915
Alignment:
Q  448 tatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtcc 493  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  10760870 tatgtcattttctcaaattattatcagtgtcgacgtgtcagtgtcc 10760915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 436 - 492
Target Start/End: Complemental strand, 7625164 - 7625108
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||||| | |||||| |||||||||||||||||||||  ||||||||||||||||||    
T  7625164 attatactaaattatatcattttctcaaattattatccgtgtcgacgtgtcggtgtc 7625108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 12086359 - 12086418
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    ||||||| | |||||||||||||| |||||||||||||||  ||||||||||| ||||||    
T  12086359 atgattaaactgaattatgtcattatctcaaattattatccgtgtcgacgtgtaggtgtc 12086418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 491
Target Start/End: Original strand, 9024190 - 9024248
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    ||||||| |||||||||||||||||||||||||||| ||   |||||||||||| ||||    
T  9024190 atgattacattgaattatgtcattttctcaaattatcatttgtgtcgacgtgtccgtgt 9024248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 169 - 306
Target Start/End: Original strand, 13184900 - 13185037
Alignment:
Q  169 tggtatgttattgttatatactcctgcttttgttgctggtgctgcgtcgtttttggtgtttcctgatgatggttttagatctttggttcttcaaggtgct 268  Q
    ||||||||| ||| | ||||||||||||||| | |||||||| | ||| |||| | | |||||| |||| ||||| ||||||    | ||||||||||||    
T  13184900 tggtatgttgttgctctatactcctgcttttctagctggtgcagtgtccttttggatctttcctaatgaaggtttaagatctacaatccttcaaggtgct 13184999  T
Q  269 gttacgtttcatttcttcaagagagtttttgaggtaat 306  Q
     | ||  |||| | |||||||||||| |||||||||||    
T  13185000 ttgacccttcactacttcaagagagtctttgaggtaat 13185037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 443 - 524
Target Start/End: Original strand, 34073371 - 34073452
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcatagat 524  Q
    |||||||||  ||||||||||||||||| | |||| | | |||| |||||| ||| |||||| || ||||||||||||||||    
T  34073371 tgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtccgtgcttcatagat 34073452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 477
Target Start/End: Complemental strand, 29711303 - 29711263
Alignment:
Q  437 ttatattgaattatgtcattttctcaaattattatcaatgt 477  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  29711303 ttataatgaattatgtcattttctcaaattattatcgatgt 29711263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 483
Target Start/End: Complemental strand, 33141297 - 33141253
Alignment:
Q  439 atattgaattatgtcattttctcaaattattatcaatgtcgacgt 483  Q
    |||||||||||||| |||||||||||||||||| | |||||||||    
T  33141297 atattgaattatgttattttctcaaattattattattgtcgacgt 33141253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 492
Target Start/End: Complemental strand, 7086828 - 7086781
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||||||| ||||||||||||||||| || || |||||||||||||||    
T  7086828 aattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtc 7086781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 492
Target Start/End: Original strand, 8805598 - 8805645
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||||||| ||||||||||||||||| || || |||||||||||||||    
T  8805598 aattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtc 8805645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 472
Target Start/End: Complemental strand, 34446610 - 34446571
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  34446610 atgattacactgaattatgtcattttctcaaattattatc 34446571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 514
Target Start/End: Original strand, 426531 - 426609
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtg 514  Q
    |||| ||| |||||||| ||||| ||||||||||| |  ||||| |||||| |||||| ||| |||||| |||||||||    
T  426531 attacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtg 426609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 471
Target Start/End: Complemental strand, 29049930 - 29049892
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattat 471  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  29049930 atgattacattgaattatgtaattttctcaaattattat 29049892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 4859128 - 4859165
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattat 471  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  4859128 tgattacattggattatgtcattttctcaaattattat 4859165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 467
Target Start/End: Complemental strand, 10158028 - 10157995
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaatta 467  Q
    |||||| |||||||||||||||||||||||||||    
T  10158028 tgattacattgaattatgtcattttctcaaatta 10157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 306
Target Start/End: Original strand, 13157125 - 13157262
Alignment:
Q  169 tggtatgttattgttatatactcctgcttttgttgctggtgctgcgtcgtttttggtgtttcctgatgatggttttagatctttggttcttcaaggtgct 268  Q
    ||||||||| ||| | ||||||||||||||| | |||||||| | ||| |||| | | |||||| |||| ||||| ||||||    | ||||||||||||    
T  13157125 tggtatgttgttgctctatactcctgcttttctagctggtgcagtgtccttttggatctttcctaatgaaggtttaagatctacaatccttcaaggtgct 13157224  T
Q  269 gttacgtttcatttcttcaagagagtttttgaggtaat 306  Q
     | ||  |||| | ||||||||| || |||||||||||    
T  13157225 ttgacccttcactacttcaagagggtctttgaggtaat 13157262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 306
Target Start/End: Original strand, 13161981 - 13162118
Alignment:
Q  169 tggtatgttattgttatatactcctgcttttgttgctggtgctgcgtcgtttttggtgtttcctgatgatggttttagatctttggttcttcaaggtgct 268  Q
    ||||||||| ||| | ||||||||||||||| | |||||||| | ||| |||| | | |||||| |||| ||||| ||||||    | ||||||||||||    
T  13161981 tggtatgttgttgctctatactcctgcttttctagctggtgcagtgtccttttggatctttcctaatgaaggtttaagatctacaatccttcaaggtgct 13162080  T
Q  269 gttacgtttcatttcttcaagagagtttttgaggtaat 306  Q
     | ||  |||| | ||||||||| || |||||||||||    
T  13162081 ttgacccttcactacttcaagagggtctttgaggtaat 13162118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 470
Target Start/End: Original strand, 6284676 - 6284712
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattatta 470  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  6284676 tgattaaattcaattatgtcattttctcaaattatta 6284712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 13184804 - 13184860
Alignment:
Q  67 tgaaattagagggaagcatttaaactattccaaattctggaacgtagataataacaa 123  Q
    |||||||||||| |||||||| || ||||||||||| ||||| | | ||||||||||    
T  13184804 tgaaattagaggaaagcatttgaattattccaaattttggaatgcaaataataacaa 13184860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 485
Target Start/End: Original strand, 17422281 - 17422321
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgtcgacgtgt 485  Q
    |||||| |||||||||||||||||||||  |||||||||||    
T  17422281 aattatatcattttctcaaattattatcggtgtcgacgtgt 17422321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 486
Target Start/End: Complemental strand, 19369861 - 19369809
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    |||||| |||||||||||||||||||||||| | |||||  |||| |||||||    
T  19369861 tgattacattgaattatgtcattttctcaaaattttatccgtgtcaacgtgtc 19369809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 473
Target Start/End: Original strand, 19602195 - 19602235
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatca 473  Q
    ||||||| | |||||||| ||||||||||||||||||||||    
T  19602195 atgattacactgaattatatcattttctcaaattattatca 19602235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 492
Target Start/End: Complemental strand, 28862167 - 28862107
Alignment:
Q  433 atgattatattgaatta-tgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    ||||||| | ||||||| ||||||||| ||||||||||||| |||||| |||| |||||||    
T  28862167 atgattacactgaattaatgtcattttatcaaattattatcgatgtcggcgtgccggtgtc 28862107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 32299312 - 32299280
Alignment:
Q  441 attgaattatgtcattttctcaaattattatca 473  Q
    |||||||||||| ||||||||||||||||||||    
T  32299312 attgaattatgtgattttctcaaattattatca 32299280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 433 - 491
Target Start/End: Complemental strand, 10546193 - 10546135
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  10546193 atgattacattgaattatgtcattttctcaaattattatcattgtcgacatgtctgtgt 10546135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 486
Target Start/End: Original strand, 5654605 - 5654658
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  5654605 atgattacattgaattatgtcattttctcaaattattatcagtgtcgacatgtc 5654658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 443 - 493
Target Start/End: Complemental strand, 7012101 - 7012051
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtcc 493  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  7012101 tgaattatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtcc 7012051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 472
Target Start/End: Original strand, 14465308 - 14465347
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  14465308 atgattaaattgaattatgtcattttctcaaattattatc 14465347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 472
Target Start/End: Original strand, 18513255 - 18513294
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  18513255 atgattacattgaattatgtcattttctcaaattattatc 18513294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 514
Target Start/End: Complemental strand, 24343542 - 24343471
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtg 514  Q
    |||||||||| |||||||||||||||||||  ||||| |||||||| |||| ||| |||||| || ||||||    
T  24343542 tgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgtg 24343471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 491
Target Start/End: Original strand, 20743292 - 20743350
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    ||||||| | ||||||||||||||||||||||||||||||  ||||| |||||| ||||    
T  20743292 atgattacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 20743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 441 - 478
Target Start/End: Complemental strand, 43188649 - 43188612
Alignment:
Q  441 attgaattatgtcattttctcaaattattatcaatgtc 478  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  43188649 attgaattatgtcattttctcaaattattatcagtgtc 43188612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 493
Target Start/End: Original strand, 34589720 - 34589780
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtcc 493  Q
    ||||||| |||||||||||||||||||||||||| |||||  |||| | ||||| ||||||    
T  34589720 atgattacattgaattatgtcattttctcaaattgttatcggtgtcaatgtgtccgtgtcc 34589780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 493
Target Start/End: Complemental strand, 12310860 - 12310798
Alignment:
Q  433 atgattatattgaattatgtcatttt--ctcaaattattatcaatgtcgacgtgtcggtgtcc 493  Q
    ||||||| ||||||||||| ||||||  |||||||||||||| ||||||| ||||| ||||||    
T  12310860 atgattacattgaattatgccattttttctcaaattattatcgatgtcgatgtgtctgtgtcc 12310798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 491
Target Start/End: Original strand, 19230326 - 19230381
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    |||| |||||||||||| ||||||||||||||||||| ||||| | ||||| ||||    
T  19230326 attacattgaattatgttattttctcaaattattatctatgtccatgtgtcagtgt 19230381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 480
Target Start/End: Original strand, 31243562 - 31243609
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcga 480  Q
    ||||||| | ||||||||||||||||||||||||||||| | ||||||    
T  31243562 atgattacactgaattatgtcattttctcaaattattataagtgtcga 31243609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 472
Target Start/End: Original strand, 43299985 - 43300024
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  43299985 atgattacattgaattatgtaattttctcaaattattatc 43300024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 472
Target Start/End: Complemental strand, 43300661 - 43300622
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  43300661 atgattacattgaattatgtaattttctcaaattattatc 43300622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 491
Target Start/End: Complemental strand, 8820445 - 8820395
Alignment:
Q  441 attgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    |||||||||||| ||||| ||||||||||||| |||| |||||||| ||||    
T  8820445 attgaattatgtgattttatcaaattattatcgatgttgacgtgtcagtgt 8820395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 471
Target Start/End: Original strand, 25390904 - 25390938
Alignment:
Q  437 ttatattgaattatgtcattttctcaaattattat 471  Q
    |||||||||||||||||||||||| ||||||||||    
T  25390904 ttatattgaattatgtcattttctaaaattattat 25390938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 492
Target Start/End: Complemental strand, 37496748 - 37496690
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||||| ||||||||||||||||||||||||  ||||||  |||| ||||||| |||||    
T  37496748 tgattacattgaattatgtcattttctcaaaaaattatcggtgtcaacgtgtcagtgtc 37496690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 2976739 - 2976702
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattatta 470  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  2976739 atgattacattcaattatgtcattttctcaaattatta 2976702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Complemental strand, 5177026 - 5176985
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgt 477  Q
    |||| |||||||||||| ||||||||||| ||||||||||||    
T  5177026 attacattgaattatgttattttctcaaaatattatcaatgt 5176985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 472
Target Start/End: Complemental strand, 32910586 - 32910557
Alignment:
Q  443 tgaattatgtcattttctcaaattattatc 472  Q
    ||||||||||||||||||||||||||||||    
T  32910586 tgaattatgtcattttctcaaattattatc 32910557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 471
Target Start/End: Complemental strand, 48845177 - 48845148
Alignment:
Q  442 ttgaattatgtcattttctcaaattattat 471  Q
    ||||||||||||||||||||||||||||||    
T  48845177 ttgaattatgtcattttctcaaattattat 48845148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 479
Target Start/End: Original strand, 51673457 - 51673502
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcg 479  Q
    |||||| | ||||||||||||||||||| ||||||||||| |||||    
T  51673457 tgattacaatgaattatgtcattttctccaattattatcagtgtcg 51673502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 470
Target Start/End: Complemental strand, 8457969 - 8457933
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattatta 470  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  8457969 tgattacattcaattatgtcattttctcaaattatta 8457933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 469
Target Start/End: Complemental strand, 11110248 - 11110212
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattatt 469  Q
    ||||||| || ||||||||||||||||||||||||||    
T  11110248 atgattacatcgaattatgtcattttctcaaattatt 11110212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 486
Target Start/End: Complemental strand, 15969397 - 15969345
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    |||||| ||| |||||||| ||||| | |||||||||||| ||||||||||||    
T  15969397 tgattacattaaattatgttattttttaaaattattatcagtgtcgacgtgtc 15969345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 523
Target Start/End: Complemental strand, 21945538 - 21945458
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcataga 523  Q
    |||||||||||||||| ||||||||||| |  ||||| | |||| |||||  |||  ||||| || |||||||||||||||    
T  21945538 tgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgtgcttcataga 21945458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 468
Target Start/End: Original strand, 26276026 - 26276058
Alignment:
Q  436 attatattgaattatgtcattttctcaaattat 468  Q
    |||| ||||||||||||||||||||||||||||    
T  26276026 attacattgaattatgtcattttctcaaattat 26276058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 491
Target Start/End: Original strand, 34515898 - 34515946
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    ||||||||||||||||||  ||||||||||  |||||||||||| ||||    
T  34515898 tgaattatgtcattttcttgaattattatccgtgtcgacgtgtcagtgt 34515946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 478
Target Start/End: Complemental strand, 41297423 - 41297391
Alignment:
Q  446 attatgtcattttctcaaattattatcaatgtc 478  Q
    |||||||||||||||||||||||||||| ||||    
T  41297423 attatgtcattttctcaaattattatcagtgtc 41297391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 486
Target Start/End: Complemental strand, 9936859 - 9936806
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  9936859 atgattatattgaattatatcattttcttaaattattatcgatgtcgacgtgtc 9936806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 441 - 492
Target Start/End: Original strand, 34739083 - 34739134
Alignment:
Q  441 attgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  34739083 attgaattatgtcattttctcatattattatcgatgtcaacgtgtcggtgtc 34739134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 521
Target Start/End: Complemental strand, 20873102 - 20873027
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcata 521  Q
    |||||||| ||||| ||||||||||||| |||||| |||||| |||||| ||| |||| |||||| |||||||||||    
T  20873102 aattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgt-ccgtattcgtgcttcata 20873027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 441 - 491
Target Start/End: Complemental strand, 5307097 - 5307048
Alignment:
Q  441 attgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    |||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  5307097 attgaattatgtcatttt-tcaaattattatcagtgtcgacgtgtccgtgt 5307048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 29198493 - 29198530
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattatta 470  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  29198493 atgattacattgaattatgtcattttctcaaattatta 29198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 435 - 472
Target Start/End: Original strand, 30068044 - 30068081
Alignment:
Q  435 gattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  30068044 gattatactgaattatgtcattttctcaaattattatc 30068081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 497
Target Start/End: Original strand, 31236594 - 31236655
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgt 497  Q
    |||| |||||||||||| ||||||||||||||||| || ||||| |||||| || |||||||    
T  31236594 attacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtatccttgt 31236655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 489
Target Start/End: Original strand, 34201063 - 34201116
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggt 489  Q
    |||| ||||||||||||||||||||||||||||||| | |||| | ||||||||    
T  34201063 attacattgaattatgtcattttctcaaattattattagtgtcaatgtgtcggt 34201116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 44067548 - 44067491
Alignment:
Q  446 attatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtc 503  Q
    |||||||||||||||||||||||||||  ||||| |||||| |||||  |||||||||    
T  44067548 attatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtc 44067491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 473
Target Start/End: Complemental strand, 3508097 - 3508057
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatca 473  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  3508097 atgattacattgaattatgttattttctcaaattattatca 3508057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 514
Target Start/End: Complemental strand, 3658171 - 3658111
Alignment:
Q  454 attttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtg 514  Q
    |||||||||||||||||||  |||||| |||||||||||| | | ||||| ||||||||||    
T  3658171 attttctcaaattattatccgtgtcgatgtgtcggtgtccatattgtgtctcgtatccgtg 3658111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 504
Target Start/End: Complemental strand, 22652018 - 22651950
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcc 504  Q
    ||||||||||||||||| ||||| ||||||||||| |  ||||| |||||| |||||| ||| ||||||    
T  22652018 attatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc 22651950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 481
Target Start/End: Original strand, 33697159 - 33697203
Alignment:
Q  437 ttatattgaattatgtcattttctcaaattattatcaatgtcgac 481  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||    
T  33697159 ttatattcaattattttattttctcaaattattatcaatgtcgac 33697203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 7616863 - 7616922
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    ||||||| |||||||| ||||||||||||||||||| ||||  || |||||||| |||||    
T  7616863 atgattacattgaattgtgtcattttctcaaattatcatcagcgttgacgtgtctgtgtc 7616922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 522
Target Start/End: Complemental strand, 14134734 - 14134661
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcatag 522  Q
    |||||||||| |||||||||||||||||  | |||||||||||| |||||     ||||| |||||||||||||||||||    
T  14134734 tgaattatgtgattttctcaaattattagtattgtcgacgtgtccgtgtc-----ggtgt-ccgtatccgtgcttcatag 14134661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 471
Target Start/End: Complemental strand, 40064001 - 40063958
Alignment:
Q  428 cgccgatgattatattgaattatgtcattttctcaaattattat 471  Q
    |||| ||||||| | |||||||||||||||||||||||||||||    
T  40064001 cgcctatgattacaatgaattatgtcattttctcaaattattat 40063958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 492
Target Start/End: Complemental strand, 45322019 - 45321968
Alignment:
Q  441 attgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||||||||||| |||||| ||||| |||||| ||||||||||||| |||||    
T  45322019 attgaattatgttattttcccaaatcattatcgatgtcgacgtgtctgtgtc 45321968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 470
Target Start/End: Original strand, 8798848 - 8798882
Alignment:
Q  436 attatattgaattatgtcattttctcaaattatta 470  Q
    ||||||||||||||||| |||||||||||||||||    
T  8798848 attatattgaattatgttattttctcaaattatta 8798882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 471
Target Start/End: Complemental strand, 12985437 - 12985399
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattat 471  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  12985437 atgattacattgaattatgtgattttctcaaattattat 12985399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 438 - 472
Target Start/End: Original strand, 14230063 - 14230097
Alignment:
Q  438 tatattgaattatgtcattttctcaaattattatc 472  Q
    |||||||||||||||||||||||||||| ||||||    
T  14230063 tatattgaattatgtcattttctcaaatgattatc 14230097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 471
Target Start/End: Original strand, 16230104 - 16230142
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattat 471  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  16230104 atgattatattaaattatgtcattttctaaaattattat 16230142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 492
Target Start/End: Original strand, 26915255 - 26915313
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||||| ||| |||||||||||||||||||| | |||||  |||||||||||| |||||    
T  26915255 tgattacattaaattatgtcattttctcaaaattttatccgtgtcgacgtgtccgtgtc 26915313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 493
Target Start/End: Complemental strand, 34897120 - 34897070
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtcc 493  Q
    |||||||||| ||||||||||||||||| |  |||||||||||| ||||||    
T  34897120 tgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtcc 34897070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 471
Target Start/End: Original strand, 37225757 - 37225795
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattat 471  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  37225757 atgattacattgaattatgttattttctcaaattattat 37225795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 486
Target Start/End: Original strand, 12936517 - 12936558
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    |||||||| ||||| ||||||||||| |||||||||||||||    
T  12936517 aattatgtgattttatcaaattattaacaatgtcgacgtgtc 12936558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 521
Target Start/End: Complemental strand, 29776078 - 29775994
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcata 521  Q
    |||||| ||||||| || ||||||||||||||||| || ||||||| ||||  ||||| ||| |||  |||||| |||||||||||    
T  29776078 attatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg-accgtattcgtgcttcata 29775994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 491
Target Start/End: Complemental strand, 42874566 - 42874509
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    |||||| |||||||||||||||||||||||| | ||| |  |||||||||||| ||||    
T  42874566 tgattacattgaattatgtcattttctcaaaatgttaacggtgtcgacgtgtccgtgt 42874509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 440 - 472
Target Start/End: Original strand, 4114224 - 4114256
Alignment:
Q  440 tattgaattatgtcattttctcaaattattatc 472  Q
    |||| ||||||||||||||||||||||||||||    
T  4114224 tattcaattatgtcattttctcaaattattatc 4114256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 468
Target Start/End: Complemental strand, 10441245 - 10441213
Alignment:
Q  436 attatattgaattatgtcattttctcaaattat 468  Q
    |||| ||||||||||||||||||||||||||||    
T  10441245 attacattgaattatgtcattttctcaaattat 10441213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 469
Target Start/End: Original strand, 16869729 - 16869765
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattatt 469  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  16869729 atgattatagtgaattatgtcattttcttaaattatt 16869765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 486
Target Start/End: Complemental strand, 27548039 - 27547987
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    |||||||||||| |||||||||||||| |||| ||| ||  ||||||||||||    
T  27548039 tgattatattgacttatgtcattttctaaaatcattttcggtgtcgacgtgtc 27547987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 28883902 - 28883930
Alignment:
Q  443 tgaattatgtcattttctcaaattattat 471  Q
    |||||||||||||||||||||||||||||    
T  28883902 tgaattatgtcattttctcaaattattat 28883930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 437 - 485
Target Start/End: Original strand, 34259813 - 34259861
Alignment:
Q  437 ttatattgaattatgtcattttctcaaattattatcaatgtcgacgtgt 485  Q
    ||||||| |||||| ||||||||||||||||||| | ||||| ||||||    
T  34259813 ttatattcaattatttcattttctcaaattattaccgatgtctacgtgt 34259861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 436 - 524
Target Start/End: Complemental strand, 19206092 - 19206004
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcatagat 524  Q
    |||||| |||||||||| ||||||||||||||||| |  ||||| ||||| ||||||| ||| |||||  |||||||||||| ||||||    
T  19206092 attataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctggtatccgtgcttaatagat 19206004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 521
Target Start/End: Complemental strand, 43250025 - 43249950
Alignment:
Q  446 attatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcata 521  Q
    |||||||||||||||||||||||||||  ||||| |||||| |||||| |||  ||||| || |||||||||||||    
T  43250025 attatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgtgcttcata 43249950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 522
Target Start/End: Original strand, 4017820 - 4017897
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcatag 522  Q
    |||||| || ||||||||||||||||||  ||||| ||||||||||||| ||| |||||| || || |||||||||||    
T  4017820 aattatatcgttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtccagtgtctgtgcttcatag 4017897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 474
Target Start/End: Original strand, 44172905 - 44172945
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaa 474  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  44172905 tgattacattgaattatgtcattttctcaaattattatcaa 44172945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 472
Target Start/End: Original strand, 2525858 - 2525897
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  2525858 atgattatattgaattatgtcatttgctcaaattattatc 2525897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 518
Target Start/End: Original strand, 11722122 - 11722197
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttc 518  Q
    |||||||||| ||||||||||||| ||| |  ||||| |||||| |||||| ||| |||||| |||||||||||||    
T  11722122 tgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgcttc 11722197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 432 - 479
Target Start/End: Original strand, 28943427 - 28943474
Alignment:
Q  432 gatgattatattgaattatgtcattttctcaaattattatcaatgtcg 479  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  28943427 gatgattacattgagttatgtcattttatcaaattattatcaatgtcg 28943474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 472
Target Start/End: Original strand, 38134420 - 38134459
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  38134420 atgattacattgaattatgtcattttctcaaattattatc 38134459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 524
Target Start/End: Complemental strand, 12289149 - 12289068
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaat-gtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcatagat 524  Q
    |||||||||| ||||||||||||||||| || | | || ||||||||||||| ||| |||| | |||||||||||||||||||    
T  12289149 tgaattatgtgattttctcaaattattagcagtggccggcgtgtcggtgtccgtgttgtgt-ctgtatccgtgcttcatagat 12289068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 435 - 493
Target Start/End: Original strand, 30516373 - 30516431
Alignment:
Q  435 gattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtcc 493  Q
    ||||| |||||||||| |||||||||||||||||| | | |||||||||||| ||||||    
T  30516373 gattacattgaattatatcattttctcaaattattgttagtgtcgacgtgtcagtgtcc 30516431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 434 - 472
Target Start/End: Original strand, 35238199 - 35238237
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  35238199 tgattatattgaattatgtcattttctcaaaatattatc 35238237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 41229299 - 41229348
Alignment:
Q  420 gacaccggcgccgatgattatattgaattatgtcattttctcaaattatt 469  Q
    ||||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  41229299 gacaccgacgcctatgattatacagaattatgtcattttctcaaattatt 41229348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 486
Target Start/End: Original strand, 9050148 - 9050200
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    ||||||||||||| ||||||||||| ||||| | ||||| |||||||||||||    
T  9050148 tgattatattgaactatgtcattttttcaaaattttatctatgtcgacgtgtc 9050200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 473
Target Start/End: Original strand, 21247750 - 21247790
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatca 473  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  21247750 atgattacattgaattacgtcattttctcaaattattatca 21247790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 454 - 486
Target Start/End: Complemental strand, 33887054 - 33887022
Alignment:
Q  454 attttctcaaattattatcaatgtcgacgtgtc 486  Q
    |||||||||||||||||||||||||||||||||    
T  33887054 attttctcaaattattatcaatgtcgacgtgtc 33887022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 492
Target Start/End: Complemental strand, 953721 - 953682
Alignment:
Q  453 cattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  953721 cattttctcaaatcattatcaatgtcgacgtgtcagtgtc 953682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 469
Target Start/End: Complemental strand, 18678192 - 18678157
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattatt 469  Q
    ||||||||||||||||||||||||||||||| ||||    
T  18678192 tgattatattgaattatgtcattttctcaaaatatt 18678157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 520
Target Start/End: Complemental strand, 28401172 - 28401102
Alignment:
Q  449 atgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcat 520  Q
    |||| |||||||||||||||||  | ||||||||||| |||| || ||| |||| |||||||||||||||||    
T  28401172 atgtgattttctcaaattattagtagtgtcgacgtgttggtgcccgtgtcgtgt-ccgtatccgtgcttcat 28401102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 492
Target Start/End: Original strand, 36013813 - 36013872
Alignment:
Q  434 tgattatattgaattatgtcatttt-ctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||||| |||||||||||||||||| ||||||||||||||| |||| | ||||| |||||    
T  36013813 tgattacattgaattatgtcatttttctcaaattattatcattgtcaatgtgtcagtgtc 36013872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 486
Target Start/End: Original strand, 927866 - 927904
Alignment:
Q  448 tatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  927866 tatgtcattttctcaaattattattagtgtcgacgtgtc 927904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 492
Target Start/End: Original strand, 5937436 - 5937494
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||||| |||||||||||||||||||||||| | |||||  ||| |||||||| |||||    
T  5937436 tgattacattgaattatgtcattttctcaaaattttatccgtgttgacgtgtctgtgtc 5937494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 471
Target Start/End: Original strand, 36314641 - 36314679
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattat 471  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  36314641 atgattacattgaaatatgtcattttctcaaattattat 36314679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 471
Target Start/End: Original strand, 41099759 - 41099793
Alignment:
Q  437 ttatattgaattatgtcattttctcaaattattat 471  Q
    |||||||||||||| ||||||||||||||||||||    
T  41099759 ttatattgaattatatcattttctcaaattattat 41099793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 467
Target Start/End: Original strand, 12843049 - 12843082
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaatta 467  Q
    |||||||||| |||||||||||||||||||||||    
T  12843049 tgattatattcaattatgtcattttctcaaatta 12843082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 493
Target Start/End: Original strand, 17780109 - 17780158
Alignment:
Q  444 gaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtcc 493  Q
    ||||||||||||||||| ||||||||||| |||||  | |||||||||||    
T  17780109 gaattatgtcattttcttaaattattatccatgtcagcatgtcggtgtcc 17780158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 486
Target Start/End: Complemental strand, 23930264 - 23930211
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    ||||||| | ||||||||||||||||||||||||| ||||  |||||| |||||    
T  23930264 atgattacactgaattatgtcattttctcaaattactatccgtgtcgatgtgtc 23930211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 24977411 - 24977460
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtcct 494  Q
    |||||| || ||||||||||||||||||||||| ||||| || |||||||    
T  24977411 aattatttcgttttctcaaattattatcaatgttgacgtatcagtgtcct 24977460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 30013239 - 30013202
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattat 471  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  30013239 tgattatattgaattacgtcattttctcatattattat 30013202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 503
Target Start/End: Complemental strand, 26733339 - 26733279
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtc 503  Q
    |||||||||| ||||| ||||||||||| |  |||||||||||| |||||| ||| |||||    
T  26733339 tgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 479
Target Start/End: Complemental strand, 30813847 - 30813811
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcg 479  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  30813847 tgaattatgtaattttctcaaattattagcaatgtcg 30813811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 433 - 485
Target Start/End: Complemental strand, 41600943 - 41600891
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgt 485  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  41600943 atgattatattgaattgtgtaattttctcaaattattatcaatgttgacgtgt 41600891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 522
Target Start/End: Complemental strand, 21137724 - 21137645
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcatag 522  Q
    ||||||| |||||||||||| ||||||| | |||||| |||||| |||||| ||| |||||| || ||||||||||||||    
T  21137724 tgaattacgtcattttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgtgcttcatag 21137645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 485
Target Start/End: Original strand, 11596469 - 11596521
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgt 485  Q
    ||||||| ||||||||||||||||||||||||||||||||  | |||||||||    
T  11596469 atgattacattgaattatgtcattttctcaaattattatcggtatcgacgtgt 11596521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 514
Target Start/End: Original strand, 6326321 - 6326392
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtg 514  Q
    |||||||||| |||||||||||||| || | |||||| |||||| |||||| ||| |||||| |||||||||    
T  6326321 tgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtg 6326392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 488
Target Start/End: Original strand, 16434396 - 16434451
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcgg 488  Q
    |||||||||||||||||||| ||||| ||||||||||||||  || ||||||||||    
T  16434396 atgattatattgaattatgttattttttcaaattattatcagagttgacgtgtcgg 16434451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 18607111 - 18607170
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||  || ||||||||    
T  18607111 atgattacattgaattatgttattttctcaaattattatccatgtcggtgtatcggtgtc 18607170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 491
Target Start/End: Original strand, 2039863 - 2039921
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    ||||||| ||||||| |||||||||||||||||||||| |  |||||||||||| ||||    
T  2039863 atgattacattgaatcatgtcattttctcaaattattaccggtgtcgacgtgtccgtgt 2039921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 441 - 486
Target Start/End: Complemental strand, 16864055 - 16864010
Alignment:
Q  441 attgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||    
T  16864055 attgaattatgtcattttctcgcattattatcaatgtcaacgtgtc 16864010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 443 - 492
Target Start/End: Complemental strand, 25863239 - 25863190
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||||||| ||||||||||||||||||||  |||||||||||||| ||||    
T  25863239 tgaattatatcattttctcaaattattatacatgtcgacgtgtcgatgtc 25863190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 441 - 486
Target Start/End: Complemental strand, 28296365 - 28296320
Alignment:
Q  441 attgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||    
T  28296365 attgaattatgtcattttctcaaattattatcggtgtcgacttgtc 28296320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 434 - 503
Target Start/End: Original strand, 30080516 - 30080585
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtc 503  Q
    |||||| |||||||||||||||||||||||| | |||||| ||||||| | || ||||| |||| |||||    
T  30080516 tgattacattgaattatgtcattttctcaaaattttatcagtgtcgacatttccgtgtcattgtcgtgtc 30080585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 478
Target Start/End: Original strand, 37472611 - 37472656
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtc 478  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||    
T  37472611 atgattatatcgaattatgtcattttctcgaattattatcagtgtc 37472656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 473
Target Start/End: Complemental strand, 40212001 - 40211961
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatca 473  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  40212001 atgattatattgaattatgtaattttctcaatttattatca 40211961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 514
Target Start/End: Original strand, 13287423 - 13287494
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtg 514  Q
    |||||||||| ||||| |||||||||||||  |||||||||||  |||||| ||| |||||| || ||||||    
T  13287423 tgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtg 13287494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 491
Target Start/End: Original strand, 38749580 - 38749635
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    |||| |||||||||||||||||| |||||||||||||  ||||||| |||| ||||    
T  38749580 attacattgaattatgtcattttttcaaattattatcggtgtcgacatgtccgtgt 38749635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 472
Target Start/End: Original strand, 43208288 - 43208327
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  43208288 atgattacattgaattatgtcattttctcaaattactatc 43208327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 485
Target Start/End: Complemental strand, 2321953 - 2321923
Alignment:
Q  455 ttttctcaaattattatcaatgtcgacgtgt 485  Q
    |||||||||||||||||||||||||||||||    
T  2321953 ttttctcaaattattatcaatgtcgacgtgt 2321923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 470
Target Start/End: Original strand, 22423829 - 22423863
Alignment:
Q  436 attatattgaattatgtcattttctcaaattatta 470  Q
    ||||||||||||||||| |||||||||||||||||    
T  22423829 attatattgaattatgtgattttctcaaattatta 22423863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 471
Target Start/End: Original strand, 16199300 - 16199337
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattat 471  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  16199300 tgattaaattgaattatgtcattttgtcaaattattat 16199337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 485
Target Start/End: Original strand, 23287366 - 23287415
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgt 485  Q
    ||||||||||||||||||||||||  ||||||||||   |||||||||||    
T  23287366 attatattgaattatgtcattttcctaaattattattggtgtcgacgtgt 23287415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 514
Target Start/End: Original strand, 26205774 - 26205855
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtg 514  Q
    ||||||| | |||||||||||||||||||||| | |||||  | |||||||||| |||||| |||  ||||| || ||||||    
T  26205774 atgattacactgaattatgtcattttctcaaaattttatcggtatcgacgtgtcagtgtccatgtcatgtccggtgtccgtg 26205855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 470
Target Start/End: Complemental strand, 31264483 - 31264446
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattatta 470  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  31264483 atgattacactgaattatgtcattttctcaaattatta 31264446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 478
Target Start/End: Original strand, 32428948 - 32428985
Alignment:
Q  441 attgaattatgtcattttctcaaattattatcaatgtc 478  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  32428948 attgaattatgtcactttctcaaattattatcagtgtc 32428985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 471
Target Start/End: Original strand, 41558706 - 41558735
Alignment:
Q  442 ttgaattatgtcattttctcaaattattat 471  Q
    ||||||||||||||||||||||||||||||    
T  41558706 ttgaattatgtcattttctcaaattattat 41558735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 443 - 493
Target Start/End: Original strand, 8077 - 8127
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtcc 493  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||    
T  8077 tgaattatgtcattttctcaaattattatccgtatcgacgtgtcggtgtcc 8127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 436 - 514
Target Start/End: Original strand, 225285 - 225363
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtg 514  Q
    |||| |||| |||||||||||||||||||||||||||  ||||| |||||| |||||| ||| |||||| || ||||||    
T  225285 attacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtg 225363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 434 - 492
Target Start/End: Original strand, 26462660 - 26462718
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||||| ||| |||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  26462660 tgattacattcaattatttcattttcttaaattattatcagtgtcgacgtgtcggtgtc 26462718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 513
Target Start/End: Complemental strand, 1262926 - 1262849
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgt 513  Q
    ||||||||||||||||| ||||||||||||||||| |  ||||| |||||| |||| | ||| |||||| ||||||||    
T  1262926 attatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggtatccgt 1262849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 486
Target Start/End: Complemental strand, 3921712 - 3921659
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    ||||||| |||||||||||||||||||||||||||||||  |||| ||||||||    
T  3921712 atgattacattgaattatgtcattttctcaaattattattgatgttgacgtgtc 3921659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 485
Target Start/End: Original strand, 7988465 - 7988517
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgt 485  Q
    ||||||| |||||||||||||| ||||| |||||||||||| |||||||||||    
T  7988465 atgattacattgaattatgtcactttcttaaattattatcagtgtcgacgtgt 7988517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 435 - 472
Target Start/End: Complemental strand, 11571628 - 11571591
Alignment:
Q  435 gattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  11571628 gattacattgaattatgtcattttctcaaattattatc 11571591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 472
Target Start/End: Original strand, 40747790 - 40747826
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatc 472  Q
    |||| ||||||||||||||||||||||||||||||||    
T  40747790 attacattgaattatgtcattttctcaaattattatc 40747826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 468
Target Start/End: Complemental strand, 2445915 - 2445880
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattat 468  Q
    ||||||| ||||||||||||||||||||||||||||    
T  2445915 atgattaaattgaattatgtcattttctcaaattat 2445880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 522
Target Start/End: Original strand, 9629924 - 9630002
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcatag 522  Q
    |||||||| | ||||| ||||||||||| |  |||||| |||||||||||| ||| |||  |||||||||||||||||||    
T  9629924 tgaattatatgattttatcaaattattagcggtgtcgatgtgtcggtgtccatgtcgtg-gccgtatccgtgcttcatag 9630002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 40686772 - 40686831
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    ||||||| |||||||||| ||||||| ||||| | ||||| ||||||||||||| |||||    
T  40686772 atgattacattgaattatatcattttatcaaaattttatcgatgtcgacgtgtcagtgtc 40686831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 438 - 472
Target Start/End: Original strand, 48785283 - 48785317
Alignment:
Q  438 tatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||||||||||| |||||||||||||||||||    
T  48785283 tatattgaattatgttattttctcaaattattatc 48785317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 609472 - 609509
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattatta 470  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  609472 atgattatgttgaattatgtaattttctcaaattatta 609509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 504
Target Start/End: Original strand, 2896145 - 2896206
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcc 504  Q
    |||||||||| ||||||||||||||||| |  ||||| |||||| |||||| ||| ||||||    
T  2896145 tgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtcc 2896206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 486
Target Start/End: Complemental strand, 19637813 - 19637760
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    ||||||| ||||||| |||||||||||| |||||||||||  |||||| |||||    
T  19637813 atgattacattgaataatgtcattttcttaaattattatcggtgtcgatgtgtc 19637760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 470
Target Start/End: Original strand, 30847734 - 30847771
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattatta 470  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  30847734 atgattacattgaattatgtcattttttcaaattatta 30847771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 472
Target Start/End: Complemental strand, 42325595 - 42325566
Alignment:
Q  443 tgaattatgtcattttctcaaattattatc 472  Q
    ||||||||||||||||||||||||||||||    
T  42325595 tgaattatgtcattttctcaaattattatc 42325566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 466
Target Start/End: Complemental strand, 14332452 - 14332420
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaatt 466  Q
    |||||| ||||||||||||||||||||||||||    
T  14332452 tgattacattgaattatgtcattttctcaaatt 14332420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 481
Target Start/End: Complemental strand, 20999653 - 20999605
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgac 481  Q
    ||||||| | ||||| |||||| |||||||||||||||||| |||||||    
T  20999653 atgattaaaatgaatcatgtcactttctcaaattattatcagtgtcgac 20999605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 514
Target Start/End: Original strand, 22794105 - 22794173
Alignment:
Q  446 attatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtg 514  Q
    ||||||||||||| |||||||||||||  ||| |||||||| |||||  ||| || ||| |||||||||    
T  22794105 attatgtcattttttcaaattattatccgtgttgacgtgtcagtgtctatgtcgtatccggtatccgtg 22794173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 522
Target Start/End: Complemental strand, 36878496 - 36878417
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgt-ggtgtcccgtatccgtgcttcatag 522  Q
    |||||||||| ||||||||||||||||| |  ||||| |||||| |||||  |||  |||| |||||||||||||||||||    
T  36878496 tgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccgtgt-ccgtatccgtgcttcatag 36878417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 474
Target Start/End: Original strand, 43609833 - 43609873
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaa 474  Q
    |||||| ||| |||||||| |||||||||||||||||||||    
T  43609833 tgattacattcaattatgttattttctcaaattattatcaa 43609873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 514
Target Start/End: Original strand, 24205068 - 24205136
Alignment:
Q  446 attatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtg 514  Q
    |||||||||||||||||||||||||||  ||||| |||||| |||||| ||| |||||| || ||||||    
T  24205068 attatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtg 24205136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 491
Target Start/End: Complemental strand, 20691364 - 20691306
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    ||||||| | ||||||||||||||||||||||||||||||| | || ||||||| ||||    
T  20691364 atgattacactgaattatgtcattttctcaaattattatcagtttctacgtgtcagtgt 20691306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 479
Target Start/End: Complemental strand, 52369820 - 52369774
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcg 479  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  52369820 atgattacattgaattatgtaattttctcaaattattatccatgtcg 52369774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 434 - 491
Target Start/End: Original strand, 46801744 - 46801801
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    |||||||||| |||| |||||||| ||||||||||||||| |||| ||||||| ||||    
T  46801744 tgattatattcaattttgtcatttactcaaattattatcagtgtcaacgtgtcagtgt 46801801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 492
Target Start/End: Original strand, 41319327 - 41319383
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||| |||||||||||||||||| ||||||||||||   |||||||||||| |||||    
T  41319327 attacattgaattatgtcattttttcaaattattattggtgtcgacgtgtccgtgtc 41319383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 492
Target Start/End: Complemental strand, 8039251 - 8039192
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    ||||||| ||||||| ||| |||||||||||||||| |||| ||||| |||||| |||||    
T  8039251 atgattacattgaatcatgccattttctcaaattatcatcagtgtcggcgtgtctgtgtc 8039192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 472
Target Start/End: Original strand, 9210847 - 9210878
Alignment:
Q  441 attgaattatgtcattttctcaaattattatc 472  Q
    ||||||||||||||||||||||||||||||||    
T  9210847 attgaattatgtcattttctcaaattattatc 9210878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 472
Target Start/End: Original strand, 12704671 - 12704710
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  12704671 atgattacattgaattatgtcattttttcaaattattatc 12704710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 522
Target Start/End: Complemental strand, 14979216 - 14979138
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcatag 522  Q
    |||||||||| ||||| ||||||||||| |  ||||| |||| |  ||||||||| |||| |||||||||||||||||||    
T  14979216 tgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgt-ccgtatccgtgcttcatag 14979138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 464
Target Start/End: Complemental strand, 15864290 - 15864259
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaa 464  Q
    ||||||||||||||||||||||||||||||||    
T  15864290 atgattatattgaattatgtcattttctcaaa 15864259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 481
Target Start/End: Original strand, 19323463 - 19323510
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgac 481  Q
    |||||| ||| ||||||||||||||||||||||| ||||| |||||||    
T  19323463 tgattaaattcaattatgtcattttctcaaattactatcagtgtcgac 19323510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 472
Target Start/End: Original strand, 40150585 - 40150624
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  40150585 atgattacattgaattatatcattttctcaaattattatc 40150624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 472
Target Start/End: Complemental strand, 21149111 - 21149073
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatc 472  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  21149111 tgattacactgaattatgtcattttctcaaattattatc 21149073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 456 - 498
Target Start/End: Complemental strand, 21367290 - 21367248
Alignment:
Q  456 tttctcaaattattatcaatgtcgacgtgtcggtgtccttgtg 498  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||    
T  21367290 tttctcaaattattatccatgtccacgtgtcggtgtccgtgtg 21367248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 25074839 - 25074781
Alignment:
Q  428 cgccgatgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    |||| ||||||| | | ||||||||||||||||||||||||||||  ||||| ||||||    
T  25074839 cgcctatgattacactcaattatgtcattttctcaaattattatcggtgtcggcgtgtc 25074781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 473
Target Start/End: Original strand, 25908855 - 25908893
Alignment:
Q  435 gattatattgaattatgtcattttctcaaattattatca 473  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  25908855 gattatattgaattatgtcattttttcaaattactatca 25908893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 517
Target Start/End: Complemental strand, 28918036 - 28917962
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgctt 517  Q
    |||||||||| ||||| ||||||||||| | |||||| |||||| || ||| ||| |||||| || |||||||||    
T  28918036 tgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgtgctt 28917962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 486
Target Start/End: Complemental strand, 5339141 - 5339100
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    |||||||| ||||||||||||||||| |||||||| ||||||    
T  5339141 aattatgtgattttctcaaattattaacaatgtcggcgtgtc 5339100  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 473
Target Start/End: Complemental strand, 13807211 - 13807174
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatca 473  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  13807211 attatattgaattatgtgattttctcaaattgttatca 13807174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 472
Target Start/End: Original strand, 16789674 - 16789703
Alignment:
Q  443 tgaattatgtcattttctcaaattattatc 472  Q
    ||||||||||||||||||||||||||||||    
T  16789674 tgaattatgtcattttctcaaattattatc 16789703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 482
Target Start/End: Original strand, 19730235 - 19730272
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgtcgacg 482  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  19730235 aattatgtcattttctcaaattattaacaatgttgacg 19730272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 473
Target Start/End: Complemental strand, 27858398 - 27858345
Alignment:
Q  420 gacaccggcgccgatgattatattgaattatgtcattttctcaaattattatca 473  Q
    ||||||| ||||  |||||| ||| ||||| |||||||||||||||||||||||    
T  27858398 gacaccgacgcctgtgattacattcaattaggtcattttctcaaattattatca 27858345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 491
Target Start/End: Complemental strand, 42667664 - 42667607
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    |||||||||| |||||||||||||||||||| |||| ||| |||| | ||||| ||||    
T  42667664 tgattatattaaattatgtcattttctcaaagtattctcattgtcaaagtgtcagtgt 42667607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 477
Target Start/End: Original strand, 19750825 - 19750857
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgt 477  Q
    |||||||||||||||||||||||||| ||||||    
T  19750825 aattatgtcattttctcaaattattaacaatgt 19750857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 486
Target Start/End: Original strand, 34409357 - 34409409
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    |||||| ||||||||||||||||||||| || |||||||  ||| ||||||||    
T  34409357 tgattacattgaattatgtcattttctcgaagtattatcggtgttgacgtgtc 34409409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000005; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 472
Target Start/End: Complemental strand, 18571017 - 18570978
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  18571017 atgattacattgaattatgtcattttctcaaattattatc 18570978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 479
Target Start/End: Complemental strand, 24011069 - 24011035
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgtcg 479  Q
    |||||||||||||||||||||||||||||||||||    
T  24011069 aattatgtcattttctcaaattattatcaatgtcg 24011035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 443 - 524
Target Start/End: Original strand, 30404874 - 30404954
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcatagat 524  Q
    |||||||||| ||||| ||||||||||| |  ||||| |||||| |||||| |||  ||| |||||||||||||||||||||    
T  30404874 tgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgt-ccgtatccgtgcttcatagat 30404954  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 478
Target Start/End: Complemental strand, 10250770 - 10250726
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtc 478  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||    
T  10250770 tgattacattgaattgtgttattttctcaaattattatcaatgtc 10250726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 472
Target Start/End: Complemental strand, 40682024 - 40681988
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatc 472  Q
    |||| ||||||||||||||||||||||||||||||||    
T  40682024 attacattgaattatgtcattttctcaaattattatc 40681988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 472
Target Start/End: Original strand, 10535773 - 10535812
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  10535773 atgattacactgaattatgtcattttctcaaattattatc 10535812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 492
Target Start/End: Complemental strand, 12748729 - 12748670
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    ||||||| | |||| ||||||||||||||||||||||||| |||||  |||||| |||||    
T  12748729 atgattacactgaactatgtcattttctcaaattattatccatgtcagcgtgtccgtgtc 12748670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 483
Target Start/End: Original strand, 19613630 - 19613677
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgt 483  Q
    |||| |||||||||||| |||||||||||||||||| | |||||||||    
T  19613630 attacattgaattatgttattttctcaaattattatgagtgtcgacgt 19613677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 488
Target Start/End: Original strand, 30298461 - 30298516
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcgg 488  Q
    ||||||| | |||||||||||||||| | |||||||||||  ||||||||||||||    
T  30298461 atgattacactgaattatgtcattttattaaattattatcggtgtcgacgtgtcgg 30298516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 472
Target Start/End: Complemental strand, 30563446 - 30563415
Alignment:
Q  441 attgaattatgtcattttctcaaattattatc 472  Q
    ||||||||||||||||||||||||||||||||    
T  30563446 attgaattatgtcattttctcaaattattatc 30563415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 472
Target Start/End: Complemental strand, 31026740 - 31026701
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatc 472  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  31026740 atgattacattgaattatgtcattttcttaaattattatc 31026701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 491
Target Start/End: Complemental strand, 37497162 - 37497107
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    |||| |||||||| || ||||||||||||||||||||| |||||| ||||| ||||    
T  37497162 attacattgaattgtggcattttctcaaattattatcagtgtcgatgtgtcagtgt 37497107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 472
Target Start/End: Complemental strand, 16630839 - 16630801
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatc 472  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  16630839 tgattaaattgaattatgtcattttcttaaattattatc 16630801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 492
Target Start/End: Original strand, 43586020 - 43586078
Alignment:
Q  434 tgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||||| |||||||||||||||||||||||| | |||||  ||| |||||||| |||||    
T  43586020 tgattacattgaattatgtcattttctcaaaattttatctgtgttgacgtgtcagtgtc 43586078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 486
Target Start/End: Original strand, 2846923 - 2846976
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtc 486  Q
    ||||||| |||||||||||||||| |||| ||||||||||  ||||||| ||||    
T  2846923 atgattacattgaattatgtcattgtctccaattattatctgtgtcgacttgtc 2846976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 477
Target Start/End: Complemental strand, 2073979 - 2073943
Alignment:
Q  441 attgaattatgtcattttctcaaattattatcaatgt 477  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  2073979 attgaattatgttattttctcaaattattatcgatgt 2073943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 473
Target Start/End: Complemental strand, 4690335 - 4690295
Alignment:
Q  433 atgattatattgaattatgtcattttctcaaattattatca 473  Q
    |||||| |||| |||||||| ||||||||||||||||||||    
T  4690335 atgattgtattaaattatgttattttctcaaattattatca 4690295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 492
Target Start/End: Complemental strand, 18125665 - 18125605
Alignment:
Q  433 atgattatattgaattatgtcattttct-caaattattatcaatgtcgacgtgtcggtgtc 492  Q
    ||||||| ||||||||||| |||||| | ||||||||||||  ||||||| ||||||||||    
T  18125665 atgattagattgaattatgccatttttttcaaattattatcggtgtcgacatgtcggtgtc 18125605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 503
Target Start/End: Complemental strand, 21616797 - 21616737
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtc 503  Q
    |||||||||| ||||||||||||||||| |  ||||| |||||| |||||| ||| |||||    
T  21616797 tgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 443 - 491
Target Start/End: Original strand, 21782842 - 21782890
Alignment:
Q  443 tgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgt 491  Q
    |||||||||| ||||||||||||||||| || ||||| |||||| ||||    
T  21782842 tgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 513
Target Start/End: Original strand, 23355021 - 23355089
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgt 513  Q
    |||||| |||||||||||||||||||||  ||||  | ||||||||||| |||  |||||||| |||||    
T  23355021 aattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtcatgtcccgtgtccgt 23355089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 473
Target Start/End: Complemental strand, 7727 - 7695
Alignment:
Q  441 attgaattatgtcattttctcaaattattatca 473  Q
    |||||||||||||||||||||||||||||||||    
T  7727 attgaattatgtcattttctcaaattattatca 7695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 524
Target Start/End: Complemental strand, 241627 - 241548
Alignment:
Q  445 aattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtccttgtggtgtcccgtatccgtgcttcatagat 524  Q
    |||||||| |||||  |||||||||| |  ||||| |||||| |||||| ||| |||||| || ||||||||||||||||    
T  241627 aattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgcttcatagat 241548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 477
Target Start/End: Complemental strand, 102947 - 102906
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgt 477  Q
    |||| |||||||||| ||||||||||||||||||||| ||||    
T  102947 attacattgaattatatcattttctcaaattattatcgatgt 102906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 492
Target Start/End: Original strand, 18124 - 18181
Alignment:
Q  435 gattatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    ||||| |||||||||||| ||||||||||| | |||||  |||||||||||| |||||    
T  18124 gattacattgaattatgttattttctcaaaattttatcggtgtcgacgtgtcagtgtc 18181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 492
Target Start/End: Complemental strand, 99935 - 99879
Alignment:
Q  436 attatattgaattatgtcattttctcaaattattatcaatgtcgacgtgtcggtgtc 492  Q
    |||| |||||||||||| ||||||| |||||||||||  ||||||| |||| |||||    
T  99935 attacattgaattatgttattttctaaaattattatcggtgtcgacatgtccgtgtc 99879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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