View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13789_low_42 (Length: 217)
Name: NF13789_low_42
Description: NF13789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13789_low_42 |
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Alignment Details
Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 15 - 194
Target Start/End: Complemental strand, 8695209 - 8695030
Alignment:
| Q |
15 |
attatactacttaaaaataagactattactttttacatcatctatctctatcacatcatctacttatcgcgcttattacatcactctctatttctatctt |
114 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8695209 |
attatactacttaaaaataagactattactttttacatcatctatttctatcacatcatctacttatcgcgcttattacatcactctctatttctatctt |
8695110 |
T |
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| Q |
115 |
tcttaacgttaaaacaaaagaatctctaaattttcagagaacttcacctctaccctcccatgtttatccaacaaagatgc |
194 |
Q |
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||||||||||||||| |||||||||||||||||||| |||| |||||||||| |||||||||| |||||||||||||||| |
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| T |
8695109 |
tcttaacgttaaaacgaaagaatctctaaattttcacagaatttcacctctatcctcccatgtatatccaacaaagatgc |
8695030 |
T |
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