View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1378_low_11 (Length: 344)

Name: NF1378_low_11
Description: NF1378
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1378_low_11
NF1378_low_11
[»] chr2 (22 HSPs)
chr2 (30-330)||(1177709-1178009)
chr2 (283-333)||(17157977-17158027)
chr2 (285-331)||(26648268-26648314)
chr2 (287-331)||(38305495-38305539)
chr2 (288-331)||(8738157-8738200)
chr2 (291-330)||(41437856-41437895)
chr2 (285-331)||(10021844-10021890)
chr2 (287-333)||(32347710-32347756)
chr2 (285-331)||(42185142-42185188)
chr2 (288-333)||(6376731-6376776)
chr2 (288-333)||(9740019-9740064)
chr2 (290-331)||(25083601-25083642)
chr2 (285-330)||(28720768-28720813)
chr2 (286-331)||(35808689-35808734)
chr2 (282-331)||(38305954-38306003)
chr2 (288-333)||(40443461-40443506)
chr2 (282-331)||(40957501-40957550)
chr2 (286-330)||(10187513-10187557)
chr2 (287-331)||(12603136-12603180)
chr2 (287-331)||(16675811-16675855)
chr2 (287-331)||(31838594-31838638)
chr2 (287-331)||(35808229-35808273)
[»] chr7 (20 HSPs)
chr7 (65-189)||(35048690-35048814)
chr7 (284-333)||(38228618-38228667)
chr7 (287-331)||(25968068-25968112)
chr7 (284-331)||(3143427-3143474)
chr7 (282-333)||(29165499-29165550)
chr7 (284-331)||(29185780-29185827)
chr7 (287-333)||(2850696-2850742)
chr7 (283-333)||(21751984-21752034)
chr7 (289-331)||(30420902-30420944)
chr7 (287-333)||(33507163-33507209)
chr7 (285-331)||(45020964-45021010)
chr7 (291-331)||(1975246-1975286)
chr7 (289-333)||(5072218-5072262)
chr7 (291-331)||(5072679-5072719)
chr7 (283-331)||(5367115-5367163)
chr7 (287-331)||(29186242-29186286)
chr7 (287-331)||(30421385-30421429)
chr7 (285-333)||(33507620-33507668)
chr7 (289-333)||(41648647-41648691)
chr7 (289-333)||(42913240-42913284)
[»] chr3 (13 HSPs)
chr3 (65-189)||(53325370-53325494)
chr3 (282-333)||(52587069-52587120)
chr3 (285-331)||(9111021-9111067)
chr3 (285-331)||(46710229-46710275)
chr3 (289-331)||(46887775-46887817)
chr3 (288-333)||(22154101-22154146)
chr3 (285-330)||(34744733-34744778)
chr3 (286-331)||(50743418-50743463)
chr3 (288-333)||(54279944-54279989)
chr3 (289-333)||(7351104-7351148)
chr3 (289-333)||(42373298-42373342)
chr3 (287-331)||(51949812-51949856)
chr3 (287-331)||(52718374-52718418)
[»] chr1 (29 HSPs)
chr1 (287-333)||(2970139-2970185)
chr1 (65-189)||(14122364-14122488)
chr1 (283-330)||(44463561-44463608)
chr1 (287-333)||(23529880-23529926)
chr1 (282-330)||(30926481-30926529)
chr1 (283-331)||(41411906-41411954)
chr1 (282-333)||(11192256-11192307)
chr1 (290-333)||(23488252-23488295)
chr1 (288-331)||(35259587-35259630)
chr1 (288-330)||(4898889-4898931)
chr1 (284-330)||(26073278-26073324)
chr1 (287-333)||(33524276-33524322)
chr1 (287-333)||(36016994-36017040)
chr1 (288-330)||(37848157-37848199)
chr1 (287-333)||(38163807-38163853)
chr1 (285-331)||(49580373-49580419)
chr1 (288-333)||(3792908-3792953)
chr1 (284-333)||(8887806-8887855)
chr1 (286-331)||(17337966-17338011)
chr1 (288-333)||(19893676-19893721)
chr1 (285-330)||(31683316-31683361)
chr1 (287-331)||(9593703-9593747)
chr1 (283-331)||(9840426-9840474)
chr1 (283-331)||(17935175-17935223)
chr1 (283-331)||(31682863-31682911)
chr1 (287-331)||(35789488-35789532)
chr1 (287-331)||(41804632-41804676)
chr1 (289-333)||(42283604-42283648)
chr1 (287-331)||(45363114-45363158)
[»] chr4 (30 HSPs)
chr4 (65-189)||(49622445-49622569)
chr4 (285-331)||(35419503-35419549)
chr4 (287-331)||(24650408-24650452)
chr4 (287-331)||(35074873-35074917)
chr4 (110-189)||(20007925-20008004)
chr4 (288-331)||(33180719-33180762)
chr4 (286-333)||(42512145-42512192)
chr4 (288-331)||(55172661-55172704)
chr4 (283-333)||(1620437-1620487)
chr4 (285-331)||(24749713-24749759)
chr4 (288-330)||(41456030-41456072)
chr4 (289-331)||(49333882-49333924)
chr4 (285-331)||(55811527-55811573)
chr4 (282-331)||(5519741-5519790)
chr4 (286-331)||(11493080-11493125)
chr4 (284-333)||(12698864-12698913)
chr4 (288-333)||(19037388-19037433)
chr4 (288-333)||(39150602-39150647)
chr4 (288-333)||(43201459-43201504)
chr4 (289-330)||(56319147-56319188)
chr4 (283-331)||(8080531-8080579)
chr4 (287-331)||(11987661-11987705)
chr4 (287-331)||(12294200-12294244)
chr4 (287-331)||(19054210-19054254)
chr4 (283-331)||(19689896-19689944)
chr4 (283-331)||(19700481-19700529)
chr4 (287-331)||(24654700-24654744)
chr4 (289-333)||(28984924-28984968)
chr4 (287-331)||(29771539-29771583)
chr4 (283-331)||(38992072-38992120)
[»] chr6 (7 HSPs)
chr6 (286-331)||(25022839-25022884)
chr6 (282-331)||(34674566-34674615)
chr6 (287-331)||(13691346-13691390)
chr6 (286-330)||(34875822-34875866)
chr6 (288-331)||(14185714-14185757)
chr6 (284-331)||(26569762-26569809)
chr6 (288-333)||(26570221-26570266)
[»] chr8 (18 HSPs)
chr8 (287-331)||(40665918-40665962)
chr8 (288-331)||(23796914-23796957)
chr8 (288-331)||(36310490-36310533)
chr8 (288-331)||(39276946-39276989)
chr8 (287-333)||(39276499-39276545)
chr8 (65-172)||(7494890-7494994)
chr8 (288-333)||(18173520-18173565)
chr8 (290-331)||(25564134-25564175)
chr8 (288-333)||(38508225-38508270)
chr8 (289-333)||(616309-616353)
chr8 (289-333)||(622702-622746)
chr8 (287-331)||(3612714-3612758)
chr8 (287-331)||(6082852-6082896)
chr8 (289-333)||(8841736-8841780)
chr8 (287-331)||(14092485-14092529)
chr8 (287-331)||(36091273-36091317)
chr8 (287-331)||(42026263-42026307)
chr8 (283-331)||(44625498-44625546)
[»] chr5 (17 HSPs)
chr5 (285-333)||(43401171-43401219)
chr5 (283-331)||(43446951-43446999)
chr5 (288-331)||(18256891-18256934)
chr5 (286-333)||(34449138-34449185)
chr5 (282-329)||(35240488-35240535)
chr5 (285-331)||(4843084-4843130)
chr5 (285-331)||(34728507-34728553)
chr5 (285-331)||(43447414-43447460)
chr5 (289-330)||(1055890-1055931)
chr5 (287-331)||(4843530-4843574)
chr5 (287-331)||(7002164-7002208)
chr5 (285-333)||(7274927-7274975)
chr5 (287-331)||(8596983-8597027)
chr5 (287-331)||(9509102-9509146)
chr5 (289-333)||(26338853-26338897)
chr5 (286-330)||(34448681-34448725)
chr5 (289-333)||(34598149-34598193)
[»] scaffold0022 (1 HSPs)
scaffold0022 (288-331)||(64869-64912)
[»] scaffold0361 (1 HSPs)
scaffold0361 (288-330)||(7252-7294)
[»] scaffold0508 (1 HSPs)
scaffold0508 (287-331)||(6729-6773)
[»] scaffold0041 (1 HSPs)
scaffold0041 (287-331)||(28539-28583)


Alignment Details
Target: chr2 (Bit Score: 285; Significance: 1e-160; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 30 - 330
Target Start/End: Complemental strand, 1178009 - 1177709
Alignment:
Q  30 catacatcaagcataatactttcaatattttataacttcttcagaacaaaatgacatcccaaccttaagttcatctgcttcttgaataatatttgcttct 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1178009 catacatcaagcataatactttcaatattttataacttcttcagaacaaaatgacatcccaaccttaagttcatctgcttcttgaataatatttgcttct 1177910  T
Q  130 aaatttccatcgcaatattcatttatgtgatcgatctcctcttaatcagaagaagtagatattttctccagtaatacaaaaaacaatcataaattaaaaa 229  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1177909 aaatttccattgcaatattcatttatgtgatcgatctcctcttaattagaagaagtagatattttctccagtaatacaaaaaacaatcataaattaaaaa 1177810  T
Q  230 agttaaatgaacgaactgaattaacaagtaatcatgaagacaaaatgattgctaattaagggttaaatatatttttgctccttctaaatatgtcaacttt 329  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1177809 agttaaatgaacgaactgaattaacaagtgatcatgaagacaaagtgattgctaattaagggttaaatatatttttgctccttctaaatatgtcaacttt 1177710  T
Q  330 t 330  Q
    |    
T  1177709 t 1177709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 17157977 - 17158027
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||||||||||||  ||||| ||||||| ||||||||||||    
T  17157977 aattaagggttaaatatattttttgtccttataaatatatcaacttttcat 17158027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 26648268 - 26648314
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||||    
T  26648268 ttaagggttaaatatatttttggtccctataaatatgtcaacttttc 26648314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 38305495 - 38305539
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||    
T  38305495 aagggttaaatatatttttggtccttataaatatgtcaatttttc 38305539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 8738157 - 8738200
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||    
T  8738157 agggttaaatatatttttagtccttataaatatgtcaacttttc 8738200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 41437856 - 41437895
Alignment:
Q  291 gttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    |||||||||||||||| ||||| |||||||||||||||||    
T  41437856 gttaaatatatttttggtccttataaatatgtcaactttt 41437895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 10021844 - 10021890
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||| ||||||| |||||| ||||| ||||||||||||||||||    
T  10021844 ttaagggctaaatatgtttttggtccttataaatatgtcaacttttc 10021890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 32347710 - 32347756
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||||    
T  32347710 aagggttaaatatgtttttggtccctataaatatgtcaacttttcat 32347756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 42185142 - 42185188
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||| |||||||||| |  |||||||||||||||||    
T  42185142 ttaagggttaaatatgtttttgctccctaaaaatatgtcaacttttc 42185188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 6376776 - 6376731
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||| |||||| ||||| ||||||| ||||||||||||    
T  6376776 agggttaaatatgtttttggtccttataaatatatcaacttttcat 6376731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 9740064 - 9740019
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||| |||||||||| | ||||||| ||||||||||||    
T  9740064 agggttaaatatgtttttgctccctataaatatatcaacttttcat 9740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 25083601 - 25083642
Alignment:
Q  290 ggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||| |||||||||| ||||| ||||||||||||||||||    
T  25083601 ggttaactatatttttggtccttataaatatgtcaacttttc 25083642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 28720813 - 28720768
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  28720813 ttaagggttaaatatgtttttggtccctataaatatgtcaactttt 28720768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 35808734 - 35808689
Alignment:
Q  286 taagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||| |||||| ||| | ||||||||||||||||||    
T  35808734 taagggttaaatatgtttttggtccctataaatatgtcaacttttc 35808689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 38306003 - 38305954
Alignment:
Q  282 taattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||| |||||||||||| |||||| ||| | ||||||||||||||||||    
T  38306003 taatttagggttaaatatgtttttggtccctataaatatgtcaacttttc 38305954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 40443461 - 40443506
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||| |||||| ||| | ||||||||||||||||||||    
T  40443461 agggttaaatatgtttttggtccctataaatatgtcaacttttcat 40443506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 40957501 - 40957550
Alignment:
Q  282 taattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||| |||||||||||| |||||| ||| | ||||||||||||||||||    
T  40957501 taatttagggttaaatatgtttttggtccctataaatatgtcaacttttc 40957550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 10187513 - 10187557
Alignment:
Q  286 taagggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    |||||||||||||| |||||| ||| | |||||||||||||||||    
T  10187513 taagggttaaatatgtttttggtccctataaatatgtcaactttt 10187557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 12603180 - 12603136
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  12603180 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 12603136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 16675855 - 16675811
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||  ||||| ||||||||||||||||||    
T  16675855 aagggttaaatatgttttttgtccttgtaaatatgtcaacttttc 16675811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 31838638 - 31838594
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  31838638 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 31838594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 35808229 - 35808273
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  35808229 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 35808273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 35048814 - 35048690
Alignment:
Q  65 cttcttcagaacaaaatgacatcccaaccttaagttcatctgcttcttgaataatatttgcttctaaatttccatcgcaatattcatttatgtgatcgat 164  Q
    |||||||||||| ||||| |||||||| | || |||| ||  || |||||| ||||||||||||||||||| |||| |  | ||||||||||||||| |     
T  35048814 cttcttcagaactaaatgtcatcccaatcctaggttcctcatctgcttgaacaatatttgcttctaaattttcatcactgttttcatttatgtgatcaac 35048715  T
Q  165 ctcctcttaatcagaagaagtagat 189  Q
    ||||||||   ||||||||||||||    
T  35048714 ctcctcttggacagaagaagtagat 35048690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 38228618 - 38228667
Alignment:
Q  284 attaagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||||||    
T  38228618 attaagggttaaatatgtttttggtccctataaatatgtcaacttttcat 38228667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 25968068 - 25968112
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||    
T  25968068 aagggttaaatatgtttttggtccttataaatatgtcaacttttc 25968112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 331
Target Start/End: Complemental strand, 3143474 - 3143427
Alignment:
Q  284 attaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  3143474 attaagggttaaatatgtttttgatccctataaatatgtcaacttttc 3143427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 29165550 - 29165499
Alignment:
Q  282 taattaagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||||||| |||||| ||| | ||||||| ||||||||||||    
T  29165550 taattaagggttaaatatgtttttggtccctataaatatatcaacttttcat 29165499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 29185780 - 29185827
Alignment:
Q  284 attaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  29185780 attaagggttaaatatgtttttggtccctataaatatgtcaacttttc 29185827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 2850742 - 2850696
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||||||||| ||| | ||||||| ||||||||||||    
T  2850742 aagggttaaatatatttttggtccctataaatatatcaacttttcat 2850696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 21752034 - 21751984
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||||||||| |||||| ||| | ||||||| ||||||||||||    
T  21752034 aattaagggttaaatatgtttttggtccctataaatatatcaacttttcat 21751984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 30420902 - 30420944
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||| ||| | ||||||||||||||||||    
T  30420902 gggttaaatatatttttgatccctataaatatgtcaacttttc 30420944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 33507163 - 33507209
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||||| |||||| ||||| |||||||||||||| |||||    
T  33507163 aagggttaaatatgtttttggtccttataaatatgtcaactattcat 33507209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 45020964 - 45021010
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  45020964 ttaagggttaaatatgtttttgatccctataaatatgtcaacttttc 45021010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 1975246 - 1975286
Alignment:
Q  291 gttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||| ||| | ||||||||||||||||||    
T  1975246 gttaaatatatttttggtccctataaatatgtcaacttttc 1975286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 5072218 - 5072262
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||| |||||  ||||| ||||||||||||||||||||    
T  5072218 gggttaaatatgtttttagtccttataaatatgtcaacttttcat 5072262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 331
Target Start/End: Complemental strand, 5072719 - 5072679
Alignment:
Q  291 gttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||| ||| | ||||||||||||||||||    
T  5072719 gttaaatatatttttggtccctataaatatgtcaacttttc 5072679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 5367163 - 5367115
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||| |||||||||||| |||||||||| | |||||||||||| |||||    
T  5367163 aatttagggttaaatatgtttttgctccctataaatatgtcaaattttc 5367115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 29186286 - 29186242
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||||| ||| | ||||||||| ||||||||    
T  29186286 aagggttaaatatatttttggtccctataaatatgttaacttttc 29186242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 30421429 - 30421385
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  30421429 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 30421385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 333
Target Start/End: Complemental strand, 33507668 - 33507620
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||| |||||||||| |||||| ||| | ||||||||||||||||||||    
T  33507668 ttaaaggttaaatatgtttttggtccctataaatatgtcaacttttcat 33507620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 41648691 - 41648647
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||| |||||| ||| | ||||||||||||||||||||    
T  41648691 gggttaaatatgtttttgttccatataaatatgtcaacttttcat 41648647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 42913240 - 42913284
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||| |||||| ||| | ||||||||||||||||||||    
T  42913240 gggttaaatatgtttttggtccctataaatatgtcaacttttcat 42913284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 189
Target Start/End: Original strand, 53325370 - 53325494
Alignment:
Q  65 cttcttcagaacaaaatgacatcccaaccttaagttcatctgcttcttgaataatatttgcttctaaatttccatcgcaatattcatttatgtgatcgat 164  Q
    |||||||||||  ||||| |||||||| | || |||| ||  || |||||| |||||||||||||||||||  ||| | || ||||||||||||||| |     
T  53325370 cttcttcagaattaaatgtcatcccaatcctaggttcttcatctgcttgaacaatatttgcttctaaatttttatcactattttcatttatgtgatcaac 53325469  T
Q  165 ctcctcttaatcagaagaagtagat 189  Q
    ||||||||   ||||||||||||||    
T  53325470 ctcctcttggacagaagaagtagat 53325494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 52587069 - 52587120
Alignment:
Q  282 taattaagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||| ||||||||||||||||||| ||| | ||||||| ||||||||||||    
T  52587069 taatttagggttaaatatatttttggtccctataaatatatcaacttttcat 52587120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 9111067 - 9111021
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  9111067 ttaagggttaaatatgtttttgatccctgtaaatatgtcaacttttc 9111021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 46710229 - 46710275
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  46710229 ttaagggttaaatatgtttttggtccctataaatatgtcaacttttc 46710275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Original strand, 46887775 - 46887817
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||    
T  46887775 gggttaaatatatttttgatccttataaatatatcaacttttc 46887817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 22154101 - 22154146
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||| ||||||||| |||| | ||||||||||||||||||||    
T  22154101 agggttaagtatatttttactccctataaatatgtcaacttttcat 22154146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 34744733 - 34744778
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    |||||||||||||||||||||| ||  | |||||||||||||||||    
T  34744733 ttaagggttaaatatatttttggtctctataaatatgtcaactttt 34744778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 50743463 - 50743418
Alignment:
Q  286 taagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||| |||||| ||| | ||||||||||||||||||    
T  50743463 taagggttaaatatgtttttggtccctataaatatgtcaacttttc 50743418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 54279989 - 54279944
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||| ||||| |||| | ||||||||||||||||||||    
T  54279989 agggttaaatatgtttttactccctataaatatgtcaacttttcat 54279944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 7351148 - 7351104
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||||||| ||| | ||||||| ||||||||||||    
T  7351148 gggttaaatatatttttgatccctataaatatatcaacttttcat 7351104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 42373298 - 42373342
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||| |||||| ||||| |||||||||||| |||||||    
T  42373298 gggttaaatatgtttttggtccttataaatatgtcaatttttcat 42373342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 51949856 - 51949812
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  51949856 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 51949812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 52718374 - 52718418
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  52718374 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 52718418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 2970185 - 2970139
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  2970185 aagggttaaatatatttttggtccttataaatatgtcaacttttcat 2970139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 14122488 - 14122364
Alignment:
Q  65 cttcttcagaacaaaatgacatcccaaccttaagttcatctgcttcttgaataatatttgcttctaaatttccatcgcaatattcatttatgtgatcgat 164  Q
    |||||||||||  ||||| |||||||| | ||  ||| ||  || |||||| ||||||||||||||||||| |||| | || |||||||| |||||| |     
T  14122488 cttcttcagaattaaatgtcatcccaatcctagattcttcatctgcttgaacaatatttgcttctaaattttcatcactattttcatttaggtgatcaac 14122389  T
Q  165 ctcctcttaatcagaagaagtagat 189  Q
    ||||||||   ||||||||||||||    
T  14122388 ctcctcttggacagaagaagtagat 14122364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 330
Target Start/End: Complemental strand, 44463608 - 44463561
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  44463608 aattaaggattaaatatatttttgatccttataaatatgtcaactttt 44463561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 23529926 - 23529880
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||||||||| || || ||||||||||||||||||||    
T  23529926 aagggttaaatatatttttggtcgttataaatatgtcaacttttcat 23529880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 30926529 - 30926481
Alignment:
Q  282 taattaagggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    |||||||||||||||||| |||||| ||| | |||||||||||||||||    
T  30926529 taattaagggttaaatatgtttttggtccctataaatatgtcaactttt 30926481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 41411954 - 41411906
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  41411954 aattaagggttaaatatgtttttggtccctataaatatgtcaacttttc 41411906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 333
Target Start/End: Original strand, 11192256 - 11192307
Alignment:
Q  282 taattaagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||| ||||||||||||| |||||| ||| | ||||||||||||||||||||    
T  11192256 taataaagggttaaatatgtttttggtccctataaatatgtcaacttttcat 11192307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 333
Target Start/End: Complemental strand, 23488295 - 23488252
Alignment:
Q  290 ggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||    
T  23488295 ggttaaatatgtttttggtccttataaatatgtcaacttttcat 23488252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 35259630 - 35259587
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||    
T  35259630 agggttaaatatttttttggtccttataaatatgtcaacttttc 35259587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Original strand, 4898889 - 4898931
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    |||||||||||| |||||| ||||| |||||||||||||||||    
T  4898889 agggttaaatatgtttttgttccttataaatatgtcaactttt 4898931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 330
Target Start/End: Original strand, 26073278 - 26073324
Alignment:
Q  284 attaagggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    |||||||||||||||| |||||| ||| | |||||||||||||||||    
T  26073278 attaagggttaaatatgtttttggtccctataaatatgtcaactttt 26073324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 33524322 - 33524276
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||||    
T  33524322 aagggttaaatatgtttttggtccctataaatatgtcaacttttcat 33524276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 36016994 - 36017040
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||||| |||||  ||||| ||||||||||||||||||||    
T  36016994 aagggttaaatatgtttttagtccttataaatatgtcaacttttcat 36017040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 37848199 - 37848157
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    |||||||||||| |||||| ||||| |||||||||||||||||    
T  37848199 agggttaaatatgtttttgatccttataaatatgtcaactttt 37848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 38163853 - 38163807
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||||    
T  38163853 aagggttaaatatgtttttgatccctataaatatgtcaacttttcat 38163807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 49580419 - 49580373
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  49580419 ttaagggttaaatatgtttttggtccctataaatatgtcaacttttc 49580373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 3792908 - 3792953
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||| |||||| ||| | ||||||||||||||||||||    
T  3792908 agggttaaatatgtttttggtccctataaatatgtcaacttttcat 3792953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 8887855 - 8887806
Alignment:
Q  284 attaagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||| ||| |||||||||| | ||||||| ||||||||||||    
T  8887855 attaagggttaagtatgtttttgctccctataaatatatcaacttttcat 8887806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 17337966 - 17338011
Alignment:
Q  286 taagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||| |||||| ||||| ||||||| ||||||||||    
T  17337966 taagggttaaatatgtttttggtccttataaatatatcaacttttc 17338011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 19893676 - 19893721
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||| |||||| ||| | ||||||||||||||||||||    
T  19893676 agggttaaatatgtttttggtccctataaatatgtcaacttttcat 19893721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 31683361 - 31683316
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    ||||||||||||||| |||||| ||| | |||||||||||||||||    
T  31683361 ttaagggttaaatatgtttttggtccctataaatatgtcaactttt 31683316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 9593747 - 9593703
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||  ||||| ||||||||||||||||||    
T  9593747 aagggttaaatatgtttttagtccttataaatatgtcaacttttc 9593703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 9840474 - 9840426
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||| |||||| ||| | ||||||| ||||||||||    
T  9840474 aattaagggttaaatatgtttttggtccctataaatatatcaacttttc 9840426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 17935223 - 17935175
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||| |||||||||||| |||||| ||| | ||||||||||||||||||    
T  17935223 aatttagggttaaatatgtttttggtccctataaatatgtcaacttttc 17935175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 31682863 - 31682911
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||| |||||| ||| | |||||||| |||||||||    
T  31682863 aattaagggttaaatatgtttttgatccctataaatatgccaacttttc 31682911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 35789488 - 35789532
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||||| ||  | ||||||||||||||||||    
T  35789488 aagggttaaatatatttttggtctctataaatatgtcaacttttc 35789532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 41804676 - 41804632
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||| || |||||||| ||||| ||||||||||||||||||    
T  41804676 aagggttatatgtatttttggtccttataaatatgtcaacttttc 41804632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 42283648 - 42283604
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||||||  ||| | ||||||||||||||||||||    
T  42283648 gggttaaatatatttttagtccctataaatatgtcaacttttcat 42283604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 45363114 - 45363158
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||||| ||| | |||||||||||| |||||    
T  45363114 aagggttaaatatatttttggtccctataaatatgtcaatttttc 45363158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 189
Target Start/End: Complemental strand, 49622569 - 49622445
Alignment:
Q  65 cttcttcagaacaaaatgacatcccaaccttaagttcatctgcttcttgaataatatttgcttctaaatttccatcgcaatattcatttatgtgatcgat 164  Q
    |||||||||||| ||||| |||||||| | || |||||||  ||  ||||| ||||||||||||||||||| ||||    | ||||||||||||||| |     
T  49622569 cttcttcagaactaaatgtcatcccaatcctaggttcatcatctgattgaacaatatttgcttctaaattttcatcattgttttcatttatgtgatcaac 49622470  T
Q  165 ctcctcttaatcagaagaagtagat 189  Q
    ||||||||   ||||| ||||||||    
T  49622469 ctcctcttggacagaaaaagtagat 49622445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 35419503 - 35419549
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||||||| ||| | ||||||||||||||||||    
T  35419503 ttaagggttaaatatatttttggtccctataaatatgtcaacttttc 35419549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 24650452 - 24650408
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||    
T  24650452 aagggttaaatatgtttttggtccttataaatatgtcaacttttc 24650408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 35074873 - 35074917
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||    
T  35074873 aagggttaaatatatttttggtccctataaatatgtcaacttttc 35074917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 20007925 - 20008004
Alignment:
Q  110 cttgaataatatttgcttctaaatttccatcgcaatattcatttatgtgatcgatctcctcttaatcagaagaagtagat 189  Q
    |||||| |||||||||||||||||||  ||| | || |||||||| |||||| | ||||||||   ||||||||||||||    
T  20007925 cttgaacaatatttgcttctaaattttaatcactattttcatttaggtgatcaacctcctcttggacagaagaagtagat 20008004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 33180762 - 33180719
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||    
T  33180762 agggttaaatatatttttggtccctataaatatgtcaacttttc 33180719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 42512192 - 42512145
Alignment:
Q  286 taagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||| |||||| ||| | ||||||||||||||||||||    
T  42512192 taagggttaaatatgtttttggtccctataaatatgtcaacttttcat 42512145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 55172661 - 55172704
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||    
T  55172661 agggttaaatatgtttttggtccttataaatatgtcaacttttc 55172704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 1620437 - 1620487
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||||||||| |||||| ||| | |||||||||||| |||||||    
T  1620437 aattaagggttaaatatgtttttggtccctataaatatgtcaatttttcat 1620487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 24749713 - 24749759
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  24749713 ttaagggttaaatatgtttttggtccctataaatatgtcaacttttc 24749759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 41456072 - 41456030
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||    
T  41456072 agggttaaatatatttttggtccttataaatatgccaactttt 41456030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 49333924 - 49333882
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||| |||||||||||| | ||||||||||||||||    
T  49333924 gggttaaatatgtttttgctccttatgaatatgtcaacttttc 49333882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 55811573 - 55811527
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  55811573 ttaagggttaaatatgtttttggtccctataaatatgtcaacttttc 55811527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 5519790 - 5519741
Alignment:
Q  282 taattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||| ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  5519790 taataaagggttaaatatgtttttggtccctataaatatgtcaacttttc 5519741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 11493125 - 11493080
Alignment:
Q  286 taagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||| |||||| ||| | ||||||||||||||||||    
T  11493125 taagggttaaatatgtttttggtccctataaatatgtcaacttttc 11493080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 12698913 - 12698864
Alignment:
Q  284 attaagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||| |||||||||| |||||| ||| | ||||||||||||||||||||    
T  12698913 attaaaggttaaatatgtttttgatccctataaatatgtcaacttttcat 12698864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 19037388 - 19037433
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||| |||||| ||| | ||||||||||||||||||||    
T  19037388 agggttaaatatgtttttgatccctataaatatgtcaacttttcat 19037433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 39150602 - 39150647
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||| |||||| ||| | ||||||||||||||||||||    
T  39150602 agggttaaatatgtttttggtccctataaatatgtcaacttttcat 39150647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 43201459 - 43201504
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||||||||||| ||| | ||||||| ||||||||||||    
T  43201459 agggttaaatatatttttggtccctataaatatatcaacttttcat 43201504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 56319147 - 56319188
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    |||||||||||||||||| ||| | |||||||||||||||||    
T  56319147 gggttaaatatatttttggtccctataaatatgtcaactttt 56319188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 8080579 - 8080531
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||| |||||| ||| | ||||||| ||||||||||    
T  8080579 aattaagggttaaatatgtttttggtccctataaatatatcaacttttc 8080531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 11987705 - 11987661
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  11987705 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 11987661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 12294244 - 12294200
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  12294244 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 12294200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 19054210 - 19054254
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  19054210 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 19054254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 19689944 - 19689896
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||| |||||| ||| | |||||||||||| |||||    
T  19689944 aattaagggttaaatatgtttttgatccatataaatatgtcaatttttc 19689896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 19700529 - 19700481
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||| |||||| ||| | |||||||||||| |||||    
T  19700529 aattaagggttaaatatgtttttgatccatataaatatgtcaatttttc 19700481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 24654700 - 24654744
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||||| ||| | |||||||||||| |||||    
T  24654700 aagggttaaatatatttttggtccctataaatatgtcaatttttc 24654744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 28984924 - 28984968
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||| |||||| ||| | ||||||||||||||||||||    
T  28984924 gggttaaatatgtttttggtccctataaatatgtcaacttttcat 28984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 29771539 - 29771583
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  29771539 aagggttaaatatgtttttgatccctataaatatgtcaacttttc 29771583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 38992072 - 38992120
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||| |||||||||||| |||||| ||| | ||||||||||||||||||    
T  38992072 aatttagggttaaatatgtttttggtccctataaatatgtcaacttttc 38992120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 331
Target Start/End: Original strand, 25022839 - 25022884
Alignment:
Q  286 taagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||    
T  25022839 taagggttaaatatatttttgatccctataaatatgtcaacttttc 25022884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 34674615 - 34674566
Alignment:
Q  282 taattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||| ||||||||||||||||||| ||| | ||||||||||||||||||    
T  34674615 taatttagggttaaatatatttttggtccctataaatatgtcaacttttc 34674566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 13691346 - 13691390
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||    
T  13691346 aagggttaaatatatttttgatccttataaatatatcaacttttc 13691390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 34875822 - 34875866
Alignment:
Q  286 taagggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||    
T  34875822 taagggttaaatatgtttttgatccttataaatatgtcaactttt 34875866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 14185714 - 14185757
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||    
T  14185714 agggttaaatatgtttttggtccttataaatatgtcaacttttc 14185757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 26569762 - 26569809
Alignment:
Q  284 attaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  26569762 attaagggttaaatatgtttttggtccctataaatatgtcaacttttc 26569809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 26570266 - 26570221
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||||||||||| ||  | ||||||||||||||||||||    
T  26570266 agggttaaatatatttttggtctctataaatatgtcaacttttcat 26570221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 40665918 - 40665962
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||    
T  40665918 aagggttaaatatatttttagtccttataaatatgtcaacttttc 40665962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 23796957 - 23796914
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||    
T  23796957 agggttaaatatgtttttggtccttataaatatgtcaacttttc 23796914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 36310490 - 36310533
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||    
T  36310490 agggttaaatatatttttggtccctataaatatgtcaacttttc 36310533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Complemental strand, 39276989 - 39276946
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||    
T  39276989 agggttaaatatatttttggtccctataaatatgtcaacttttc 39276946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 39276499 - 39276545
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||||||||| | | | ||||||||||||||||||||    
T  39276499 aagggttaaatatatttttgattcctataaatatgtcaacttttcat 39276545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 172
Target Start/End: Complemental strand, 7494994 - 7494890
Alignment:
Q  65 cttcttcagaacaaaatgacatcccaaccttaagttcatctgcttcttgaataatatttgcttctaaatttccatcgcaatattcatttatgtgatcgat 164  Q
    ||||||| | || ||||| ||||| ||||||||||||||||   || |||| ||||||| |||| |||||  |||| ||||  ||||||||||||||  |    
T  7494994 cttcttccggactaaatgtcatcctaaccttaagttcatct---tcatgaacaatattttcttcaaaattatcatctcaattctcatttatgtgatcact 7494898  T
Q  165 ctcctctt 172  Q
    ||||||||    
T  7494897 ctcctctt 7494890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 18173565 - 18173520
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||| |||||| ||| | ||||||||||||||||||||    
T  18173565 agggttaaatatgtttttggtccctataaatatgtcaacttttcat 18173520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 25564175 - 25564134
Alignment:
Q  290 ggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||| ||| | ||||||||||||||||||    
T  25564175 ggttaaatatatttttgatccctataaatatgtcaacttttc 25564134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 38508270 - 38508225
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||| |||||| ||| | ||||||||||||||||||||    
T  38508270 agggttaaatatgtttttggtccctataaatatgtcaacttttcat 38508225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 616353 - 616309
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||||||| ||| | ||||||| ||||||||||||    
T  616353 gggttaaatatatttttgatccctataaatatatcaacttttcat 616309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 622746 - 622702
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||||||| ||| | ||||||| ||||||||||||    
T  622746 gggttaaatatatttttgatccctataaatatatcaacttttcat 622702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 3612714 - 3612758
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  3612714 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 3612758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 6082852 - 6082896
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  6082852 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 6082896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 8841736 - 8841780
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||| |||||| ||| | ||||||||||||||||||||    
T  8841736 gggttaaatatgtttttggtccctataaatatgtcaacttttcat 8841780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 14092485 - 14092529
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  14092485 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 14092529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 36091273 - 36091317
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  36091273 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 36091317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 42026307 - 42026263
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  42026307 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 42026263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 44625498 - 44625546
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||| |||||| ||| | |||||||||||| |||||    
T  44625498 aattaagggttaaatatgtttttggtccctataaatatgtcaatttttc 44625546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 333
Target Start/End: Original strand, 43401171 - 43401219
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||||||| |||||| ||| | ||||||||||||||||||||    
T  43401171 ttaagggttaaatatgtttttggtccctataaatatgtcaacttttcat 43401219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 43446951 - 43446999
Alignment:
Q  283 aattaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  43446951 aattaagggttaaatatgtttttggtccctataaatatgtcaacttttc 43446999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 18256891 - 18256934
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||    
T  18256891 agggttaaatatatttttggtccctataaatatgtcaacttttc 18256934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 34449185 - 34449138
Alignment:
Q  286 taagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    |||||||||||||| |||||| ||| | ||||||||||||||||||||    
T  34449185 taagggttaaatatgtttttggtccctttaaatatgtcaacttttcat 34449138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 329
Target Start/End: Complemental strand, 35240535 - 35240488
Alignment:
Q  282 taattaagggttaaatatatttttgctccttctaaatatgtcaacttt 329  Q
    |||| |||||||||||||||||||| ||| | ||||||||||||||||    
T  35240535 taataaagggttaaatatatttttggtccctataaatatgtcaacttt 35240488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 4843084 - 4843130
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  4843084 ttaagggttaaatatgtttttggtccctataaatatgtcaacttttc 4843130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 34728507 - 34728553
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  34728507 ttaagggttaaatatgtttttgatccctataaatatgtcaacttttc 34728553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 43447460 - 43447414
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||| |||||| ||| | ||||||||||||||||||    
T  43447460 ttaagggttaaatatgtttttggtccctataaatatgtcaacttttc 43447414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 1055890 - 1055931
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    ||||||||||| |||||| ||||| |||||||||||||||||    
T  1055890 gggttaaatatgtttttggtccttataaatatgtcaactttt 1055931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 4843574 - 4843530
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  4843574 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 4843530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 7002208 - 7002164
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  7002208 aagggttaaatatgtttttgatccctataaatatgtcaacttttc 7002164  T

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Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 333
Target Start/End: Original strand, 7274927 - 7274975
Alignment:
Q  285 ttaagggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||| ||||||||| |||||| ||| | ||||||||||||||||||||    
T  7274927 ttaagcgttaaatatgtttttggtccctataaatatgtcaacttttcat 7274975  T

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Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 8597027 - 8596983
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  8597027 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 8596983  T

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Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 9509102 - 9509146
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    |||||||||||||||||||| ||  | ||||||||||||||||||    
T  9509102 aagggttaaatatatttttggtctctataaatatgtcaacttttc 9509146  T

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Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 26338853 - 26338897
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||| |||||| ||| | ||||||||||||||||||||    
T  26338853 gggttaaatatgtttttggtccctataaatatgtcaacttttcat 26338897  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 34448681 - 34448725
Alignment:
Q  286 taagggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    |||||||||||||| |||||| ||| | |||||||||||||||||    
T  34448681 taagggttaaatatgtttttggtccctataaatatgtcaactttt 34448725  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 34598149 - 34598193
Alignment:
Q  289 gggttaaatatatttttgctccttctaaatatgtcaacttttcat 333  Q
    ||||||||||| |||||| ||||| ||||||| ||||||||||||    
T  34598149 gggttaaatatgtttttggtccttataaatatatcaacttttcat 34598193  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 331
Target Start/End: Original strand, 64869 - 64912
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||    
T  64869 agggttaaatatatttttggtccctataaatatgtcaacttttc 64912  T

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Target: scaffold0361 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 330
Target Start/End: Complemental strand, 7294 - 7252
Alignment:
Q  288 agggttaaatatatttttgctccttctaaatatgtcaactttt 330  Q
    |||||||||||| ||||||||| || |||||||||||||||||    
T  7294 agggttaaatatgtttttgctctttataaatatgtcaactttt 7252  T

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Target: scaffold0508 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 6773 - 6729
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||||| ||||||| ||||||||||    
T  6773 aagggttaaatatgtttttggtccttataaatatatcaacttttc 6729  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 331
Target Start/End: Complemental strand, 28583 - 28539
Alignment:
Q  287 aagggttaaatatatttttgctccttctaaatatgtcaacttttc 331  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||||    
T  28583 aagggttaaatatgtttttggtccctataaatatgtcaacttttc 28539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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