View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13793_low_6 (Length: 364)
Name: NF13793_low_6
Description: NF13793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13793_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 24 - 346
Target Start/End: Original strand, 34134020 - 34134342
Alignment:
| Q |
24 |
tagagttgatcccggtgtcgggcctaacaatattttctttcaattgcagtaagtgaatgatctgagaagtcgtcaactgatctaaagttggcggctgctg |
123 |
Q |
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| T |
34134020 |
tagagttgatcccggtgtcggacctaacaatattttctttcaattgcagtaagtgaatgatctgagaagtcgtcaactgatctaaagttggcggctgctg |
34134119 |
T |
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| Q |
124 |
agaaacaagatttccttgtggattttgattagggcttggtgcaaagccgaaacgatcaggattggacagaacctcttgaatgatttcaggatcaaggtat |
223 |
Q |
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| T |
34134120 |
agaaacaagatgtccttgtggattttgattagggcttggtgcaaagccgaaacgatcaggattggacagaacctcttgaatgatttcaggatcaaggtat |
34134219 |
T |
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| Q |
224 |
ttaatcagttcattcttcaccttcttgagttcatcttgaacatccttcaaagtcttttcaagaaaggatgcaggaccaacaacgccataaacgttgtccc |
323 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
34134220 |
ttaatcagttcattcttcaccttcttgagttcatcttgaacatccttcaacgtcttttcaagaaaggatgcaggaccaacaacgccataaacattgtccc |
34134319 |
T |
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| Q |
324 |
ttaaacgcgcctcagcctgatac |
346 |
Q |
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| ||||||||||||||||||||| |
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| T |
34134320 |
tcaaacgcgcctcagcctgatac |
34134342 |
T |
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