View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13795_low_10 (Length: 303)
Name: NF13795_low_10
Description: NF13795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13795_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 17 - 288
Target Start/End: Original strand, 2375978 - 2376249
Alignment:
| Q |
17 |
atgaatccctttaacaatgtaaaaccaagcatcaaaacttgaaatttgagtaataaaatatttcagatttagtcaagaatttcagtcaaagtgaagacct |
116 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
2375978 |
atgaattcctttaacaatgtaaaaccaagcatcaaaacttgaaatttgagtaataaaatatttcagatttagtcaagaatttcagtcaaagtgaagagct |
2376077 |
T |
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| Q |
117 |
tagatagttataatttaatgcagtagaatttatttagtaaacatgtgaaacatactttatatatagctacatatacaaggaaaaacaaagagaaccttga |
216 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2376078 |
tagatagttataatttaatgcattagaatttatttagtaaacatgtgaaacatactttatatatagctacatatacaaggaaaaacaaagagaaccttga |
2376177 |
T |
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| Q |
217 |
atttaatttaaatccagaatgaataaataggaaaaaatattacaagattaaatatttttagatgataattat |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2376178 |
atttaatttaaatccagaatgaataaataggaaaaaatattacaagattaaatatttttagatgataattat |
2376249 |
T |
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