View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13797_low_12 (Length: 331)
Name: NF13797_low_12
Description: NF13797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13797_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 20 - 319
Target Start/End: Complemental strand, 23836755 - 23836455
Alignment:
| Q |
20 |
aggataaatatgttgtatcaaaaaactagaataa-tgataaatgattaaatgatagaatcattttttgagggaacattatagaatcatatttcctttact |
118 |
Q |
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|||||||||||| ||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23836755 |
aggataaatatgctgtatcaaaaaactagaataaatgataaatgattacattatagaatcattttttgagggaacattatagaatcatatttcctttact |
23836656 |
T |
|
| Q |
119 |
aacctactaaacattaggacatcgacacatgaaccccgcaatacactttggtaattcagacttgtttctacataaaagagatggacaatcactgtcctga |
218 |
Q |
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||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23836655 |
aacctactaaacattaggacaacgacacatgaacccagcaatacattttggtaattcagacttgtttctacataaaagagatggacaatcactgtcctga |
23836556 |
T |
|
| Q |
219 |
gtgcacttgtgaaagaattcaaaaaagtttccacttacaacaagagttatatgaataaataggatcatagcatataaaaacttgtgaattgtacccatat |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23836555 |
gtgcacttgtgaaagaattcaaaaaagtttccacttacaacaagagttatatgaataaataggatcatagcatataaaaacttgtgaattgtacccatat |
23836456 |
T |
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| Q |
319 |
t |
319 |
Q |
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| T |
23836455 |
t |
23836455 |
T |
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