View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13798_high_1 (Length: 376)
Name: NF13798_high_1
Description: NF13798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13798_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 40 - 354
Target Start/End: Complemental strand, 5669141 - 5668827
Alignment:
| Q |
40 |
catcatcatccatgcagattggtttagagcaatgaacttgataatttattaagttaaacatgtgaatgtagatgagagaatccaagcatgtgactatgtg |
139 |
Q |
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| T |
5669141 |
catcatcatccatgcagattggtttagagcaatgaacttgataatttattaagttaaacatgtgaatgtagatgagagaatccaagcatgtgagtgtgtg |
5669042 |
T |
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| Q |
140 |
acaatgtatctctataaagaaagagcatttgattttcaaattagattctctagaaaaggaatgttattttttattcatatataaagccatgtactcattt |
239 |
Q |
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| T |
5669041 |
acaatgtatctctataaagaaaaagcatttgattttcaaattagattctctagaaaagaaatgttcttttttattcatatataaagccatatactcattt |
5668942 |
T |
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| Q |
240 |
tcataccatgggtttgatatgaacagattcatgcagccacactctttttaaattaagggaagttttgctctaatattctgactgaacatgtagcttggca |
339 |
Q |
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| T |
5668941 |
tcataccatgggtttgatatgaacagattcatgcagccacactctttttaaattaagggaagttttgctctaatattctgactgaacatgtagcttggca |
5668842 |
T |
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| Q |
340 |
aaccattaagcatgt |
354 |
Q |
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| T |
5668841 |
aaccattaagcatgt |
5668827 |
T |
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