View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1379_low_17 (Length: 509)

Name: NF1379_low_17
Description: NF1379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1379_low_17
NF1379_low_17
[»] chr1 (80 HSPs)
chr1 (236-367)||(34062217-34062348)
chr1 (235-369)||(46333944-46334078)
chr1 (263-376)||(29371367-29371480)
chr1 (236-348)||(48498442-48498553)
chr1 (238-369)||(8337853-8337983)
chr1 (236-376)||(15220810-15220959)
chr1 (249-373)||(47303397-47303521)
chr1 (245-367)||(38674513-38674633)
chr1 (235-349)||(741500-741614)
chr1 (249-351)||(4609020-4609122)
chr1 (234-348)||(48604944-48605058)
chr1 (245-349)||(37155072-37155177)
chr1 (237-378)||(28928779-28928912)
chr1 (264-348)||(17127591-17127675)
chr1 (234-349)||(29179585-29179709)
chr1 (419-499)||(41431673-41431752)
chr1 (239-337)||(9157348-9157446)
chr1 (263-349)||(48993943-48994029)
chr1 (250-317)||(1819502-1819569)
chr1 (236-369)||(49444903-49445043)
chr1 (263-345)||(5995399-5995481)
chr1 (249-349)||(5694902-5695001)
chr1 (275-337)||(1091582-1091644)
chr1 (263-349)||(32540774-32540860)
chr1 (239-299)||(29371370-29371430)
chr1 (263-347)||(33219601-33219685)
chr1 (245-299)||(8337927-8337981)
chr1 (260-349)||(44706806-44706896)
chr1 (236-293)||(48823884-48823941)
chr1 (250-378)||(36290428-36290557)
chr1 (249-308)||(19711192-19711251)
chr1 (245-299)||(46334022-46334076)
chr1 (266-337)||(45728325-45728396)
chr1 (243-373)||(34062215-34062345)
chr1 (245-299)||(49444987-49445041)
chr1 (313-378)||(4609072-4609137)
chr1 (313-381)||(1819483-1819551)
chr1 (313-360)||(47303471-47303518)
chr1 (245-299)||(38674579-38674633)
chr1 (319-373)||(48823887-48823941)
chr1 (238-299)||(47303396-47303457)
chr1 (313-373)||(8337854-8337913)
chr1 (313-373)||(28928781-28928841)
chr1 (313-373)||(46333948-46334008)
chr1 (245-308)||(2573163-2573226)
chr1 (50-176)||(3855937-3856061)
chr1 (314-377)||(32157602-32157665)
chr1 (299-349)||(21630068-21630118)
chr1 (236-270)||(26514245-26514279)
chr1 (50-127)||(36816698-36816775)
chr1 (313-358)||(48604964-48605009)
chr1 (263-299)||(1091620-1091656)
chr1 (263-299)||(4609022-4609058)
chr1 (239-299)||(15220813-15220873)
chr1 (263-299)||(21630068-21630104)
chr1 (263-299)||(28395663-28395699)
chr1 (236-272)||(48993907-48993943)
chr1 (236-291)||(4579168-4579222)
chr1 (50-121)||(27310648-27310719)
chr1 (50-116)||(16359111-16359177)
chr1 (37-127)||(18532579-18532669)
chr1 (332-377)||(5694888-5694933)
chr1 (319-376)||(9157392-9157449)
chr1 (50-127)||(18252095-18252172)
chr1 (304-349)||(28395663-28395708)
chr1 (245-298)||(32157602-32157655)
chr1 (235-272)||(44183438-44183475)
chr1 (243-272)||(44706896-44706925)
chr1 (236-284)||(4579263-4579310)
chr1 (294-326)||(7788305-7788337)
chr1 (267-299)||(9157340-9157372)
chr1 (236-291)||(12440949-12441005)
chr1 (263-299)||(32540824-32540860)
chr1 (148-223)||(35930563-35930639)
chr1 (263-299)||(36290483-36290519)
chr1 (263-299)||(37155072-37155108)
chr1 (313-369)||(38674511-38674567)
chr1 (263-299)||(46932023-46932059)
chr1 (263-295)||(46932062-46932094)
chr1 (263-299)||(48993993-48994029)
[»] chr4 (73 HSPs)
chr4 (229-369)||(47404577-47404717)
chr4 (234-360)||(40789194-40789320)
chr4 (245-376)||(55090004-55090135)
chr4 (235-369)||(31430459-31430590)
chr4 (251-370)||(52028554-52028673)
chr4 (236-369)||(42375016-42375158)
chr4 (235-326)||(50384103-50384194)
chr4 (236-377)||(24006069-24006202)
chr4 (236-349)||(47661868-47661990)
chr4 (235-349)||(23444258-23444381)
chr4 (239-322)||(28693925-28694008)
chr4 (263-349)||(6271728-6271814)
chr4 (263-349)||(51265471-51265557)
chr4 (263-369)||(53954616-53954722)
chr4 (263-349)||(35682192-35682278)
chr4 (274-367)||(38714831-38714924)
chr4 (249-326)||(45591422-45591499)
chr4 (260-347)||(26186039-26186124)
chr4 (265-326)||(25818401-25818462)
chr4 (264-349)||(31532716-31532801)
chr4 (313-378)||(47404582-47404647)
chr4 (263-348)||(47762635-47762720)
chr4 (56-210)||(5616284-5616439)
chr4 (239-286)||(24006151-24006198)
chr4 (286-349)||(30861823-30861886)
chr4 (245-299)||(52028557-52028611)
chr4 (250-299)||(40789192-40789241)
chr4 (236-293)||(55089876-55089933)
chr4 (313-373)||(50384107-50384167)
chr4 (263-346)||(44379959-44380042)
chr4 (245-376)||(55089995-55090126)
chr4 (245-299)||(42375018-42375072)
chr4 (313-378)||(40789255-40789320)
chr4 (140-223)||(30040719-30040803)
chr4 (245-297)||(47404663-47404715)
chr4 (245-293)||(53954618-53954666)
chr4 (236-284)||(54716348-54716396)
chr4 (319-373)||(31430463-31430517)
chr4 (50-127)||(8845268-8845345)
chr4 (50-127)||(8858232-8858309)
chr4 (131-223)||(11420980-11421073)
chr4 (50-127)||(18262277-18262354)
chr4 (50-127)||(18269138-18269215)
chr4 (243-288)||(38714829-38714874)
chr4 (51-127)||(868663-868739)
chr4 (260-292)||(17285813-17285845)
chr4 (313-373)||(24006072-24006132)
chr4 (245-285)||(31430548-31430588)
chr4 (148-230)||(5870399-5870482)
chr4 (236-291)||(9712845-9712900)
chr4 (263-302)||(22592921-22592960)
chr4 (50-121)||(28393205-28393276)
chr4 (313-376)||(28693922-28693985)
chr4 (263-298)||(31532766-31532801)
chr4 (134-223)||(1941691-1941781)
chr4 (53-127)||(10677618-10677691)
chr4 (53-127)||(10891258-10891331)
chr4 (313-375)||(45591410-45591472)
chr4 (319-373)||(55089879-55089933)
chr4 (50-127)||(4426669-4426745)
chr4 (51-116)||(5668203-5668267)
chr4 (50-127)||(19926825-19926902)
chr4 (243-272)||(23444381-23444410)
chr4 (50-127)||(26970528-26970605)
chr4 (263-312)||(49469934-49469983)
chr4 (51-127)||(5707386-5707462)
chr4 (51-127)||(5714014-5714090)
chr4 (321-373)||(9712848-9712900)
chr4 (313-349)||(26186042-26186078)
chr4 (264-296)||(47762635-47762667)
chr4 (313-349)||(47762684-47762720)
chr4 (236-272)||(51265557-51265593)
chr4 (325-373)||(55516948-55516996)
[»] chr3 (59 HSPs)
chr3 (249-376)||(47677267-47677394)
chr3 (236-343)||(33689208-33689315)
chr3 (250-376)||(29031727-29031853)
chr3 (239-358)||(30476476-30476595)
chr3 (237-349)||(49418691-49418803)
chr3 (263-357)||(1801472-1801566)
chr3 (236-349)||(43139708-43139821)
chr3 (245-349)||(18321677-18321781)
chr3 (232-349)||(51046059-51046185)
chr3 (263-349)||(41752990-41753076)
chr3 (263-348)||(30580782-30580867)
chr3 (263-343)||(47492073-47492153)
chr3 (260-349)||(50550001-50550090)
chr3 (265-349)||(30734430-30734514)
chr3 (275-347)||(50524730-50524802)
chr3 (236-297)||(49414501-49414562)
chr3 (239-299)||(47677331-47677391)
chr3 (234-349)||(55223258-55223373)
chr3 (245-299)||(1801571-1801625)
chr3 (313-379)||(55223308-55223374)
chr3 (294-360)||(39385745-39385811)
chr3 (308-369)||(1801566-1801627)
chr3 (315-373)||(49414501-49414559)
chr3 (311-376)||(1272492-1272557)
chr3 (265-330)||(30904289-30904354)
chr3 (236-308)||(45103099-45103180)
chr3 (255-299)||(1801522-1801566)
chr3 (313-373)||(33689252-33689312)
chr3 (250-298)||(39385765-39385813)
chr3 (313-373)||(49418693-49418753)
chr3 (50-117)||(18520043-18520110)
chr3 (236-299)||(30476550-30476613)
chr3 (321-374)||(17547059-17547112)
chr3 (319-376)||(18321733-18321790)
chr3 (50-127)||(18522728-18522805)
chr3 (313-378)||(29031711-29031776)
chr3 (239-299)||(1272495-1272555)
chr3 (236-272)||(1272561-1272597)
chr3 (239-299)||(29031790-29031850)
chr3 (313-349)||(51046099-51046135)
chr3 (236-291)||(22894003-22894058)
chr3 (313-376)||(30476473-30476536)
chr3 (37-87)||(15342324-15342374)
chr3 (265-299)||(50524730-50524764)
chr3 (50-127)||(6110129-6110206)
chr3 (50-127)||(10572657-10572734)
chr3 (50-127)||(13211367-13211444)
chr3 (50-127)||(15600949-15601026)
chr3 (50-127)||(15607494-15607571)
chr3 (50-127)||(17781183-17781260)
chr3 (50-127)||(19089810-19089887)
chr3 (236-289)||(20496482-20496535)
chr3 (260-312)||(36417050-36417103)
chr3 (243-272)||(43139821-43139850)
chr3 (183-223)||(14147038-14147078)
chr3 (51-127)||(18640811-18640887)
chr3 (236-272)||(30734514-30734550)
chr3 (263-299)||(41752990-41753026)
chr3 (313-349)||(50550051-50550087)
[»] scaffold0047 (3 HSPs)
scaffold0047 (247-369)||(63763-63885)
scaffold0047 (245-299)||(63765-63819)
scaffold0047 (313-358)||(63833-63878)
[»] chr7 (43 HSPs)
chr7 (236-369)||(29053313-29053446)
chr7 (239-349)||(27028795-27028905)
chr7 (245-349)||(34854703-34854807)
chr7 (234-349)||(11016895-11017019)
chr7 (233-349)||(41018224-41018340)
chr7 (240-367)||(4649328-4649457)
chr7 (236-349)||(45231853-45231962)
chr7 (263-349)||(15027568-15027654)
chr7 (260-349)||(7671934-7672023)
chr7 (236-348)||(10419485-10419597)
chr7 (236-367)||(42628303-42628443)
chr7 (263-343)||(48000769-48000849)
chr7 (263-349)||(4290571-4290657)
chr7 (263-345)||(38975835-38975917)
chr7 (245-299)||(29053390-29053444)
chr7 (243-293)||(42628301-42628351)
chr7 (275-347)||(41945883-41945955)
chr7 (290-349)||(22764753-22764812)
chr7 (37-127)||(18257907-18257997)
chr7 (263-312)||(48000720-48000769)
chr7 (244-299)||(4649327-4649382)
chr7 (52-127)||(13392218-13392292)
chr7 (239-289)||(25001349-25001399)
chr7 (319-373)||(27028795-27028849)
chr7 (313-378)||(4649398-4649463)
chr7 (50-127)||(15152508-15152585)
chr7 (131-223)||(15999946-16000039)
chr7 (313-370)||(34854700-34854757)
chr7 (313-378)||(41018225-41018290)
chr7 (317-377)||(30165327-30165387)
chr7 (287-347)||(30217504-30217564)
chr7 (234-272)||(4290657-4290695)
chr7 (54-116)||(7396258-7396320)
chr7 (261-299)||(7671987-7672025)
chr7 (249-295)||(30165327-30165373)
chr7 (321-370)||(10419542-10419591)
chr7 (308-349)||(27028754-27028795)
chr7 (50-127)||(29327849-29327926)
chr7 (338-378)||(11016979-11017019)
chr7 (263-299)||(15027568-15027604)
chr7 (263-299)||(22764776-22764812)
chr7 (323-375)||(25001347-25001399)
chr7 (263-299)||(27028869-27028905)
[»] chr5 (48 HSPs)
chr5 (242-349)||(16439164-16439271)
chr5 (236-349)||(3180059-3180172)
chr5 (263-369)||(3899845-3899951)
chr5 (235-369)||(16971150-16971293)
chr5 (249-378)||(16802441-16802570)
chr5 (263-373)||(28818919-28819029)
chr5 (236-349)||(19598358-19598470)
chr5 (234-349)||(30117816-30117940)
chr5 (263-349)||(19655184-19655270)
chr5 (263-349)||(29699393-29699479)
chr5 (263-349)||(291123-291209)
chr5 (236-369)||(2953204-2953338)
chr5 (269-372)||(38134405-38134508)
chr5 (276-373)||(26662401-26662498)
chr5 (276-373)||(26933996-26934093)
chr5 (275-349)||(12913829-12913903)
chr5 (239-330)||(2935829-2935923)
chr5 (313-373)||(3180062-3180122)
chr5 (236-292)||(28818916-28818972)
chr5 (263-322)||(2093963-2094022)
chr5 (236-299)||(26662398-26662461)
chr5 (236-299)||(26933993-26934056)
chr5 (245-299)||(3899847-3899901)
chr5 (245-299)||(16971152-16971206)
chr5 (50-116)||(27347554-27347619)
chr5 (240-299)||(38134449-38134508)
chr5 (263-376)||(2356274-2356383)
chr5 (233-299)||(16802440-16802506)
chr5 (50-127)||(17285797-17285874)
chr5 (235-308)||(37325556-37325629)
chr5 (245-285)||(2953206-2953246)
chr5 (51-127)||(18807099-18807175)
chr5 (50-122)||(19707288-19707360)
chr5 (50-122)||(19714568-19714640)
chr5 (313-349)||(28818993-28819029)
chr5 (275-326)||(228399-228450)
chr5 (313-360)||(16439214-16439261)
chr5 (249-283)||(6912355-6912389)
chr5 (135-223)||(5097619-5097708)
chr5 (235-300)||(6912295-6912360)
chr5 (263-308)||(14167178-14167223)
chr5 (50-127)||(18569928-18570005)
chr5 (131-211)||(39535428-39535509)
chr5 (313-349)||(291173-291209)
chr5 (236-272)||(291209-291245)
chr5 (313-373)||(6912299-6912359)
chr5 (263-299)||(19655184-19655220)
chr5 (49-85)||(22547123-22547159)
[»] chr6 (27 HSPs)
chr6 (239-360)||(10521851-10521972)
chr6 (263-369)||(12343106-12343212)
chr6 (236-349)||(551164-551277)
chr6 (263-376)||(24618627-24618740)
chr6 (234-373)||(2315301-2315440)
chr6 (265-349)||(17750928-17751012)
chr6 (291-373)||(31654307-31654389)
chr6 (236-343)||(13043489-13043605)
chr6 (278-348)||(24587488-24587558)
chr6 (239-299)||(24618677-24618737)
chr6 (236-299)||(31654304-31654367)
chr6 (319-377)||(10521847-10521905)
chr6 (313-370)||(551170-551227)
chr6 (50-127)||(16566385-16566462)
chr6 (245-280)||(13766746-13766781)
chr6 (245-299)||(12343108-12343162)
chr6 (264-301)||(7384515-7384552)
chr6 (50-127)||(17684534-17684611)
chr6 (50-127)||(17691505-17691582)
chr6 (248-299)||(10521925-10521976)
chr6 (37-116)||(25537235-25537314)
chr6 (50-116)||(189053-189119)
chr6 (313-354)||(2315325-2315366)
chr6 (50-127)||(27381317-27381394)
chr6 (50-127)||(27471700-27471777)
chr6 (236-284)||(2315395-2315443)
chr6 (151-198)||(15048155-15048203)
[»] chr2 (41 HSPs)
chr2 (242-370)||(2893968-2894096)
chr2 (245-349)||(15011306-15011410)
chr2 (263-369)||(6217250-6217356)
chr2 (256-373)||(2828586-2828703)
chr2 (242-349)||(37762006-37762113)
chr2 (263-373)||(14229379-14229488)
chr2 (263-369)||(29925596-29925702)
chr2 (233-369)||(38933593-38933738)
chr2 (264-369)||(37961712-37961817)
chr2 (236-349)||(6721977-6722099)
chr2 (263-337)||(14470618-14470692)
chr2 (236-349)||(16514450-16514572)
chr2 (37-216)||(19692511-19692691)
chr2 (263-349)||(29508716-29508803)
chr2 (245-299)||(6217300-6217354)
chr2 (235-337)||(14892299-14892409)
chr2 (248-299)||(38933598-38933649)
chr2 (236-298)||(2893962-2894024)
chr2 (245-299)||(29925646-29925700)
chr2 (235-299)||(2828582-2828646)
chr2 (236-299)||(14229429-14229491)
chr2 (245-299)||(37961714-37961768)
chr2 (239-304)||(14464557-14464622)
chr2 (245-349)||(9172989-9173093)
chr2 (320-376)||(14464554-14464610)
chr2 (50-179)||(18619870-18619996)
chr2 (275-345)||(24115950-24116020)
chr2 (239-347)||(8534174-8534285)
chr2 (313-369)||(15011356-15011412)
chr2 (244-299)||(2143948-2144003)
chr2 (50-121)||(18796571-18796642)
chr2 (236-291)||(42971576-42971630)
chr2 (313-367)||(2894039-2894093)
chr2 (238-288)||(4399134-4399183)
chr2 (234-291)||(7755333-7755390)
chr2 (50-127)||(21330313-21330390)
chr2 (263-308)||(32545855-32545900)
chr2 (263-299)||(6721977-6722013)
chr2 (313-349)||(14229379-14229415)
chr2 (338-378)||(32545898-32545938)
chr2 (338-378)||(38933697-38933737)
[»] chr8 (39 HSPs)
chr8 (236-349)||(8243387-8243500)
chr8 (263-348)||(10086784-10086869)
chr8 (226-330)||(34541792-34541896)
chr8 (263-349)||(35440995-35441081)
chr8 (263-369)||(39850961-39851067)
chr8 (234-349)||(5033187-5033311)
chr8 (237-348)||(34229668-34229779)
chr8 (263-348)||(8796449-8796534)
chr8 (235-349)||(33841580-33841703)
chr8 (263-349)||(5667123-5667209)
chr8 (264-347)||(4958627-4958709)
chr8 (282-378)||(6296602-6296698)
chr8 (263-349)||(45191153-45191239)
chr8 (234-299)||(6296602-6296667)
chr8 (90-231)||(24797349-24797491)
chr8 (263-326)||(31159900-31159963)
chr8 (263-312)||(35031640-35031689)
chr8 (245-373)||(37618736-37618860)
chr8 (254-299)||(39850972-39851017)
chr8 (313-373)||(34229717-34229777)
chr8 (313-373)||(34541805-34541865)
chr8 (237-292)||(39139844-39139899)
chr8 (50-116)||(24642714-24642780)
chr8 (51-116)||(24636920-24636985)
chr8 (313-373)||(8243390-8243450)
chr8 (248-308)||(36766175-36766235)
chr8 (236-307)||(1880306-1880376)
chr8 (322-373)||(1880323-1880373)
chr8 (50-121)||(6094188-6094259)
chr8 (148-230)||(8371491-8371574)
chr8 (302-349)||(43844534-43844581)
chr8 (338-380)||(5033271-5033313)
chr8 (235-272)||(5667086-5667123)
chr8 (37-86)||(10920248-10920297)
chr8 (151-223)||(18835334-18835407)
chr8 (50-127)||(21940730-21940807)
chr8 (320-373)||(39139844-39139897)
chr8 (263-299)||(5033187-5033223)
chr8 (263-299)||(45191203-45191239)
[»] scaffold0481 (2 HSPs)
scaffold0481 (247-324)||(2897-2974)
scaffold0481 (313-370)||(2892-2949)
[»] scaffold0016 (2 HSPs)
scaffold0016 (233-369)||(49690-49835)
scaffold0016 (248-299)||(49779-49830)
[»] scaffold0586 (2 HSPs)
scaffold0586 (274-349)||(7084-7159)
scaffold0586 (263-299)||(7123-7159)
[»] scaffold1033 (2 HSPs)
scaffold1033 (239-323)||(2265-2349)
scaffold1033 (313-374)||(2289-2350)
[»] scaffold1029 (2 HSPs)
scaffold1029 (239-323)||(2265-2349)
scaffold1029 (313-374)||(2289-2350)
[»] scaffold0161 (1 HSPs)
scaffold0161 (264-349)||(27247-27332)
[»] scaffold0180 (1 HSPs)
scaffold0180 (239-322)||(19115-19207)
[»] scaffold0063 (1 HSPs)
scaffold0063 (50-116)||(5594-5660)
[»] scaffold0536 (1 HSPs)
scaffold0536 (263-314)||(4918-4969)
[»] scaffold0006 (1 HSPs)
scaffold0006 (134-223)||(67619-67709)
[»] scaffold0234 (2 HSPs)
scaffold0234 (50-127)||(2386-2463)
scaffold0234 (50-127)||(11277-11354)


Alignment Details
Target: chr1 (Bit Score: 100; Significance: 3e-49; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 236 - 367
Target Start/End: Complemental strand, 34062348 - 34062217
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||| ||||    
T  34062348 gggtagcatttgggtaacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacataagcattgtggcattgtgat 34062249  T
Q  336 tgaccaatgtcaccgaactctatgttacccaa 367  Q
    || ||||||||||| |||||||||| ||||||    
T  34062248 tggccaatgtcacccaactctatgtcacccaa 34062217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 235 - 369
Target Start/End: Original strand, 46333944 - 46334078
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatga 334  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| |||    
T  46333944 cgggtagcacttgggtgacatagagttggatgacattggccaatcacaatgtcacaatgcttgtgaaagagagaaaaacacaagcattgtgacattgtga 46334043  T
Q  335 ttgaccaatgtcaccgaactctatgttacccaagt 369  Q
    |||  |||||||| | |||||||||| ||||||||    
T  46334044 ttggtcaatgtcatccaactctatgtcacccaagt 46334078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 263 - 376
Target Start/End: Complemental strand, 29371480 - 29371367
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgtta 362  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||| |    
T  29371480 ggtgatattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtcacctaactctatgtca 29371381  T
Q  363 cccaagtgctatcc 376  Q
    ||||| ||||||||    
T  29371380 cccaaatgctatcc 29371367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 48498553 - 48498442
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||  ||||||||    
T  48498553 gggtagcacttgggtgacatagagttgg-tgacattgaccaatcacaatgttaccatgcttgtgaaagagagagaaacacaaacattgtggtattatgat 48498455  T
Q  336 tgaccaatgtcac 348  Q
    |||||||||||||    
T  48498454 tgaccaatgtcac 48498442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 238 - 369
Target Start/End: Original strand, 8337853 - 8337983
Alignment:
Q  238 gtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattg 337  Q
    |||||| || ||||| |||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  8337853 gtagcacttaggtgatatagagttgg-tgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtggcattgtgattg 8337951  T
Q  338 accaatgtcaccgaactctatgttacccaagt 369  Q
      |||||||||| |||||||||| ||||||||    
T  8337952 gtcaatgtcacccaactctatgtcacccaagt 8337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 236 - 376
Target Start/End: Complemental strand, 15220959 - 15220810
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattga---------ccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    |||||||||||||||||||||||||||||||||||||          ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  15220959 gggtagcatttgggtgacatagagttgggtgacattggtgatattggccaatcacaatctcacaatgcttgtgaaagagagagaaacacaagcattgtga 15220860  T
Q  327 cattatgattgaccaatgtcaccgaactctatgttacccaagtgctatcc 376  Q
     ||  |||||||||||||||||| ||||| |||| |||||||||||||||    
T  15220859 gatcgtgattgaccaatgtcacccaactccatgtcacccaagtgctatcc 15220810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 249 - 373
Target Start/End: Complemental strand, 47303521 - 47303397
Alignment:
Q  249 gtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcac 348  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||  |||| ||||    
T  47303521 gtgacatagagttaggtgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattggtcaatatcac 47303422  T
Q  349 cgaactctatgttacccaagtgcta 373  Q
    | |||||||| | || |||||||||    
T  47303421 ctaactctatatcactcaagtgcta 47303397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 245 - 367
Target Start/End: Original strand, 38674513 - 38674633
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatg 344  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||| |||||||  |||||||||||||| ||||||||||||||||||| |||||     
T  38674513 ttgggtgacatggagttgggtgatattggccaatcacaatgtcacaatgcttgtgaa--agagagaaacacaagcattgtgacattatgattggccaata 38674610  T
Q  345 tcaccgaactctatgttacccaa 367  Q
    ||||| |||||||||| ||||||    
T  38674611 tcacccaactctatgtcacccaa 38674633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 235 - 349
Target Start/End: Original strand, 741500 - 741614
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatga 334  Q
    ||||||||| ||| |||| ||||| || |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||    
T  741500 cgggtagcacttgcgtgatatagaattaggtgacattgcccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtga 741599  T
Q  335 ttgaccaatgtcacc 349  Q
    | |||||||||||||    
T  741600 tcgaccaatgtcacc 741614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 249 - 351
Target Start/End: Complemental strand, 4609122 - 4609020
Alignment:
Q  249 gtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcac 348  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |  |||||||||    
T  4609122 gtgacatagagttgggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgatgggtcaatgtcac 4609023  T
Q  349 cga 351  Q
    |||    
T  4609022 cga 4609020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 234 - 348
Target Start/End: Original strand, 48604944 - 48605058
Alignment:
Q  234 acgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatg 333  Q
    ||||||||||||||| ||| |||||||| ||||||||||  |||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||     
T  48604944 acgggtagcatttggatgatatagagttaggtgacattggtcaatcacaatgtcacaatatttgtgaaagagagagaaacgcaagcattgtgacattata 48605043  T
Q  334 attgaccaatgtcac 348  Q
    |||| ||||||||||    
T  48605044 attggccaatgtcac 48605058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 245 - 349
Target Start/End: Complemental strand, 37155177 - 37155072
Alignment:
Q  245 ttgggtgaca-tagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaat 343  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  37155177 ttgggtgacaatagagttgggtgacattggccaatcacaatgtcacaatacttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaat 37155078  T
Q  344 gtcacc 349  Q
    ||||||    
T  37155077 gtcacc 37155072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 237 - 378
Target Start/End: Original strand, 28928779 - 28928912
Alignment:
Q  237 ggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgatt 336  Q
    ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||        |||||    
T  28928779 ggtagcacttgggtgacatagagtttggtgacattggccaatcacaatgtcacagtgcttgtgaaagagagagaaacacaaacactg--------tgatt 28928870  T
Q  337 gaccaatgtcaccgaactctatgttacccaagtgctatccgt 378  Q
    | ||||||||||| |||||||| | || ||||||||||||||    
T  28928871 ggccaatgtcaccaaactctatatcactcaagtgctatccgt 28928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 264 - 348
Target Start/End: Original strand, 17127591 - 17127675
Alignment:
Q  264 gtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcac 348  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||  |||||||||    
T  17127591 gtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattttgattggtcaatgtcac 17127675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 349
Target Start/End: Original strand, 29179585 - 29179709
Alignment:
Q  234 acgggtagcatttgggtgacatagagttgggtgacattg---------accaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgt 324  Q
    |||||||||| |||| |||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  29179585 acgggtagcacttggatgacatagagttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgt 29179684  T
Q  325 gacattatgattgaccaatgtcacc 349  Q
    | |||| |||||| |||||||||||    
T  29179685 ggcattgtgattggccaatgtcacc 29179709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 41431752 - 41431673
Alignment:
Q  419 gaaacaggtttcacactaaactgtttacaagttcttgtttccaaacgtctgaacaaatatacggagtgaacacaacctatg 499  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41431752 gaaacaggtttcacaataa-ctgtttacaagttcttgtttccaaacgtctgaacaaatatatggagtgaacacaacctatg 41431673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 239 - 337
Target Start/End: Complemental strand, 9157446 - 9157348
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattg 337  Q
    ||||| ||| ||||||||||||||| ||||||||| |||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||| ||||||    
T  9157446 tagcacttgtgtgacatagagttggttgacattgatcaatcacaatatcacaatgcttgagaaagagagagaaacacaagcattgtgacattgtgattg 9157348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 48993943 - 48994029
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||| ||||||  ||||||||||    
T  48993943 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcacc 48994029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 1819502 - 1819569
Alignment:
Q  250 tgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaa 317  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  1819502 tgacatagagttgggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 1819569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 236 - 369
Target Start/End: Original strand, 49444903 - 49445043
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattg---------accaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    |||||||| ||||||||||||||||||||||||||||         | |||||||||||| |||||| ||||||  ||||||||||||||| |||||||     
T  49444903 gggtagcacttgggtgacatagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtga--gagagagaaacacaagcattgtgg 49445000  T
Q  327 cattatgattgaccaatgtcaccgaactctatgttacccaagt 369  Q
    |||| |||||| ||||||||||| |||||||||| ||||||||    
T  49445001 cattgtgattggccaatgtcacccaactctatgtcacccaagt 49445043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 5995481 - 5995399
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgt 345  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| |||| |||||| |||||||    
T  5995481 ggtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgt 5995399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 349
Target Start/End: Original strand, 5694902 - 5695001
Alignment:
Q  249 gtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcac 348  Q
    ||||||||||||| ||||||||||  |||||||||| | | |||| |||||||||||||||||||||||| ||||||||||| | |||||||||||||||    
T  5694902 gtgacatagagtttggtgacattggtcaatcacaatatta-aatgcttgtgaaagagagagaaacacaaatattgtgacattgtaattgaccaatgtcac 5695000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 1091582 - 1091644
Alignment:
Q  275 caatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattg 337  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  1091582 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattg 1091644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 32540774 - 32540860
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||| ||||||  ||||||||||    
T  32540774 ggtggcattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtaacattgtgattggtcaatgtcacc 32540860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 29371370 - 29371430
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  29371370 tagcatttgggtgacatagagttaggtgacattggccaatcacaatgtcacaatgtttgtg 29371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 263 - 347
Target Start/End: Complemental strand, 33219685 - 33219601
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtca 347  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||| |||||||| |||||| ||||| ||||||| ||||||||    
T  33219685 ggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagaaaaacacaagcattgtaacattgtgattgatcaatgtca 33219601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 8337981 - 8337927
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8337981 ttgggtgacatagagttgggtgacattgaccaatcacaatgccacaatgtttgtg 8337927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 260 - 349
Target Start/End: Original strand, 44706806 - 44706896
Alignment:
Q  260 ttgggtgacattgaccaatcacaa-tgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||||||||||| |||||||||| || ||||||| ||||||||||||||||||||||| ||||| | |||| |||||| |||||||||||    
T  44706806 ttgggtgacattggccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcacc 44706896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 48823884 - 48823941
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatg 293  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48823884 gggtagcacttgggtgacatagagttgggtgacattggccaatcacaatgtcacaatg 48823941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 250 - 378
Target Start/End: Original strand, 36290428 - 36290557
Alignment:
Q  250 tgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattg---------acc 340  Q
    ||||||||||||||||||||||| ||||||||||||         |||||||||||||||||||||||| ||||||||||| ||||||         |||    
T  36290428 tgacatagagttgggtgacattggccaatcacaatgc--------ttgtgaaagagagagaaacacaaatattgtgacattgtgattggtcaatgccacc 36290519  T
Q  341 aatgtcaccgaactctatgttacccaagtgctatccgt 378  Q
    ||||||||| |||||||||| |||||||| ||||||||    
T  36290520 aatgtcacccaactctatgtcacccaagtactatccgt 36290557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 19711192 - 19711251
Alignment:
Q  249 gtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagaga 308  Q
    |||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  19711192 gtgacatagagttgggtgacattgaccaatcacaatgttacaatgcatgtgaaagagaga 19711251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 46334076 - 46334022
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  46334076 ttgggtgacatagagttggatgacattgaccaatcacaatgtcacaatgcttgtg 46334022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 266 - 337
Target Start/End: Complemental strand, 45728396 - 45728325
Alignment:
Q  266 gacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattg 337  Q
    |||||||  |||||||||||||| |||| ||||||||||||||||||||||| |||||||| ||| ||||||    
T  45728396 gacattggtcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattgtgatattgtgattg 45728325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 373
Target Start/End: Original strand, 34062215 - 34062345
Alignment:
Q  243 atttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaa 342  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||             |||||||||||||||||| ||||||  |||    
T  34062215 atttgggtgacatagagttgggtgacattggccaatcacaatgccacaatgcttatgtttctctctctttcacaaacattgtgacattgtgattggtcaa 34062314  T
Q  343 tgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||||| ||||||||||||||||| |||||    
T  34062315 tgtcacccaactctatgttacccaaatgcta 34062345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 49445041 - 49444987
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  49445041 ttgggtgacatagagttgggtgacattggccaatcacaatgccacaatgcttgtg 49444987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 4609072 - 4609137
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatccgt 378  Q
    ||||| |||||||||||| |||||||||||||||||| |||||||||| || ||||| ||||||||    
T  4609072 cacaagcattgtgacattgtgattgaccaatgtcacccaactctatgtcacacaagtactatccgt 4609137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 313 - 381
Target Start/End: Complemental strand, 1819551 - 1819483
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatccgtctt 381  Q
    ||||| |||||||||||| ||||||| |||||||||| |||||||||| |  |||||||||||||||||    
T  1819551 cacaagcattgtgacattgtgattgatcaatgtcacccaactctatgtcattcaagtgctatccgtctt 1819483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 47303471 - 47303518
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgt 360  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||    
T  47303471 cacaaacattgtgacattgtgattgaccaatgtcacctaactctatgt 47303518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 38674633 - 38674579
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||    
T  38674633 ttgggtgacatagagttgggtgatattggccaatcataatgtcacaatgcttgtg 38674579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 48823941 - 48823887
Alignment:
Q  319 cattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    |||||||||||| |||||| ||||||||||| |||||||||| ||||||||||||    
T  48823941 cattgtgacattgtgattggccaatgtcacccaactctatgtcacccaagtgcta 48823887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 47303396 - 47303457
Alignment:
Q  238 gtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||| ||| |||| |||||||| ||||| |||||||||||||||||||| ||||||||||    
T  47303396 gtagcacttgagtgatatagagttaggtgatattgaccaatcacaatgtcataatgtttgtg 47303457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 8337913 - 8337854
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    |||||||||||||||||| |||||||||||||||||| |||||||| | ||| ||||||||    
T  8337913 cacaaacattgtgacattgtgattgaccaatgtcacc-aactctatatcacctaagtgcta 8337854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 28928841 - 28928781
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||| || ||||||||| |||||| ||||||||||| |||||||||| ||||||||||||    
T  28928841 cacaagcactgtgacattgtgattggccaatgtcaccaaactctatgtcacccaagtgcta 28928781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 46334008 - 46333948
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||| |||||||||||| |||||| ||||||||| | |||||||||| ||||||||||||    
T  46334008 cacaagcattgtgacattgtgattggccaatgtcatccaactctatgtcacccaagtgcta 46333948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 2573163 - 2573226
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagaga 308  Q
    ||||| |||||||||||| |||| |||||| ||||||||| |||||||| |||||||| |||||    
T  2573163 ttgggggacatagagttgagtgatattgactaatcacaatatcacaatgcttgtgaaaaagaga 2573226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 3856061 - 3855937
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagtaaaaaactttattatgaactag 149  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||| |||||||||||| |||   ||||   |||||||||| |||| | |    
T  3856061 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggacattattcttaaaatatttgtagt--caaactttattgtgaagtgg 3855964  T
Q  150 gataatagtaaagcatgaagactatta 176  Q
    |||| || ||||||||| |||||||||    
T  3855963 gatattattaaagcatggagactatta 3855937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 32157602 - 32157665
Alignment:
Q  314 acaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatccg 377  Q
    |||| |||||||||| | |||||||||||||||||| |||||||||| | |||||| |||||||    
T  32157602 acaagcattgtgacactgtgattgaccaatgtcaccaaactctatgtcatccaagtactatccg 32157665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 349
Target Start/End: Complemental strand, 21630118 - 21630068
Alignment:
Q  299 gaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||||||||||||||||| |||||||||||| ||||||  ||||||||||    
T  21630118 gaaagagagagaaacacaagcattgtgacattgtgattggtcaatgtcacc 21630068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 270
Target Start/End: Complemental strand, 26514279 - 26514245
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacat 270  Q
    |||||||||||||||||||||||||||||||||||    
T  26514279 gggtagcatttgggtgacatagagttgggtgacat 26514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 36816775 - 36816698
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | | ||||| |||||||   |||||||  ||||| |||||||||||| ||||||||||    
T  36816775 gtttaatggaacattaagtataaattaattgtgagactccgttaaacataaggacattattcttaaagtatccatagt 36816698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 48605009 - 48604964
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctat 358  Q
    |||||| ||||||||||| |||||||||||||||||| ||||||||    
T  48605009 cacaaatattgtgacattgtgattgaccaatgtcacctaactctat 48604964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 1091656 - 1091620
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||| ||||||||||||||||||||||||||||||    
T  1091656 ggtgactttgaccaatcacaatgtcacaatgtttgtg 1091620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 4609022 - 4609058
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||| |||||||||||||||||||||||    
T  4609022 ggtgacattgacccatcacaatgtcacaatgtttgtg 4609058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 15220813 - 15220873
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||| ||||||||||| ||||||||||||||||  ||||||| || |||||||| |||||    
T  15220813 tagcacttgggtgacatggagttgggtgacattggtcaatcacgatctcacaatgcttgtg 15220873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 21630068 - 21630104
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||||||||||||||| |||||    
T  21630068 ggtgacattgaccaatcacaatgtcacaatgcttgtg 21630104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 28395663 - 28395699
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||||||||||||||| |||||    
T  28395663 ggtgacattgaccaatcacaatgtcacaatgcttgtg 28395699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 48993907 - 48993943
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattg 272  Q
    |||||||| ||||||||||||||||||||||||||||    
T  48993907 gggtagcacttgggtgacatagagttgggtgacattg 48993943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 4579168 - 4579222
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaa 291  Q
    |||||||| |||||||||||||| |||| |||||||| |||| |||||||||||||    
T  4579168 gggtagcacttgggtgacatagaattgg-tgacattggccaaccacaatgtcacaa 4579222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 27310719 - 27310648
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatc 121  Q
    ||||||||||||||||||| | ||||||| ||||||||  ||| |||  ||||||| |||||||||| ||||    
T  27310719 gtttaatggaacattaagtataacttaattgtgagaccacgttgaacataaggaaactattcttaaagtatc 27310648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 16359177 - 16359111
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaa 116  Q
    ||||||||||||||||||  | ||||||| ||||||||  |||||||  ||||||| ||||||||||    
T  16359177 gtttaatggaacattaagaataacttaattgtgagaccccgttaaacataaggaaactattcttaaa 16359111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 18532669 - 18532579
Alignment:
Q  37 gaataatttgttggtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||| || ||| ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  18532669 gaatagttagttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 18532579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 5694933 - 5694888
Alignment:
Q  332 tgattgaccaatgtcaccgaactctatgttacccaagtgctatccg 377  Q
    |||||||||||||||||| |||||||||| || |||||| ||||||    
T  5694933 tgattgaccaatgtcaccaaactctatgtcactcaagtgttatccg 5694888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 9157392 - 9157449
Alignment:
Q  319 cattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatcc 376  Q
    |||||||| ||| ||||||| |||||||| | |||||||||| || ||||||||||||    
T  9157392 cattgtgatattgtgattgatcaatgtcaaccaactctatgtcacacaagtgctatcc 9157449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 18252095 - 18252172
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  18252095 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 18252172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 28395708 - 28395663
Alignment:
Q  304 agagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||||||| |||||||||||| ||||||  ||||||||||    
T  28395708 agagagaaacacaagcattgtgacattgtgattggtcaatgtcacc 28395663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 32157655 - 32157602
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgt 298  Q
    |||| |||||||||||| ||||||||||  |||||||| |||||||||| ||||    
T  32157655 ttggatgacatagagtttggtgacattggtcaatcacagtgtcacaatgcttgt 32157602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 272
Target Start/End: Complemental strand, 44183475 - 44183438
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgggtgacattg 272  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  44183475 cgggtagcacttgggtgacatagagttaggtgacattg 44183438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 272
Target Start/End: Complemental strand, 44706925 - 44706896
Alignment:
Q  243 atttgggtgacatagagttgggtgacattg 272  Q
    ||||||||||||||||||||||||||||||    
T  44706925 atttgggtgacatagagttgggtgacattg 44706896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 4579310 - 4579263
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaat 284  Q
    |||||||| |||||||||||||| || |||||||||| |||||||||||    
T  4579310 gggtagcacttgggtgacatagaatt-ggtgacattggccaatcacaat 4579263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 326
Target Start/End: Original strand, 7788305 - 7788337
Alignment:
Q  294 tttgtgaaagagagagaaacacaaacattgtga 326  Q
    ||||||||||||||||||||| |||||||||||    
T  7788305 tttgtgaaagagagagaaacataaacattgtga 7788337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 9157340 - 9157372
Alignment:
Q  267 acattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||||||||||| |||||    
T  9157340 acattgaccaatcacaatgtcacaatgcttgtg 9157372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 12440949 - 12441005
Alignment:
Q  236 gggtagcatttgggtgacatagagt-tgggtgacattgaccaatcacaatgtcacaa 291  Q
    |||||||| || ||||||||||||  | ||||||||||||||| |||||||||||||    
T  12440949 gggtagcacttaggtgacatagagaattggtgacattgaccaaccacaatgtcacaa 12441005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 32540860 - 32540824
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||||||||| |||||| |||||    
T  32540860 ggtgacattgaccaatcacaatgttacaatgcttgtg 32540824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 35930563 - 35930639
Alignment:
Q  148 aggataatagtaaagcatgaagactattatgt-taaagactgatcaccacatttcatgggtcatggatatgggatat 223  Q
    ||||||||| |||||| |  |||||||||||| || |||||||| ||| ||| ||||||||||| |||||| |||||    
T  35930563 aggataataataaagcgtcgagactattatgtatatagactgatgaccgcatctcatgggtcatagatatgagatat 35930639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 36290519 - 36290483
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  36290519 ggtggcattgaccaatcacaatgtcacaatatttgtg 36290483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 37155072 - 37155108
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||| |||||||||||||||||||| |||||    
T  37155072 ggtgacattggccaatcacaatgtcacaatgcttgtg 37155108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 38674567 - 38674511
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagt 369  Q
    ||||| |||||||||||| |||||| ||||| ||||| ||||| |||| ||||||||    
T  38674567 cacaagcattgtgacattgtgattggccaatatcacccaactccatgtcacccaagt 38674511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 46932023 - 46932059
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||| |||||||||||| |||||||||||||    
T  46932023 ggtgacattggccaatcacaatgccacaatgtttgtg 46932059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 295
Target Start/End: Complemental strand, 46932094 - 46932062
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtt 295  Q
    ||||||||||||||||||||||| |||||||||    
T  46932094 ggtgacattgaccaatcacaatgccacaatgtt 46932062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 48994029 - 48993993
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  48994029 ggtgacattgaccaatcacaatgccacaatgcttgtg 48993993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 2e-47; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 229 - 369
Target Start/End: Original strand, 47404577 - 47404717
Alignment:
Q  229 ctttcacgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgaca 328  Q
    |||| |||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||| ||||||| ||    
T  47404577 cttttacgggtagcacttgggtgacatagagttgggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacccaagcattgtggca 47404676  T
Q  329 ttatgattgaccaatgtcaccgaactctatgttacccaagt 369  Q
    || |||||||||||||||||| |||||||||| ||||||||    
T  47404677 ttgtgattgaccaatgtcacccaactctatgtcacccaagt 47404717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 40789320 - 40789194
Alignment:
Q  234 acgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatg 333  Q
    |||||||||| ||||||||||||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  40789320 acgggtagcacttgggtgacatagagtttggtgatattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtg 40789221  T
Q  334 attgaccaatgtcaccgaactctatgt 360  Q
    |||| ||||||||||| ||||||||||    
T  40789220 attggccaatgtcaccaaactctatgt 40789194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 245 - 376
Target Start/End: Original strand, 55090004 - 55090135
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatg 344  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  55090004 ttgggtgacatagagttgagtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagagacacaagcattgtgacattgtgattgaccaatg 55090103  T
Q  345 tcaccgaactctatgttacccaagtgctatcc 376  Q
    ||||  |||||||||| ||||||||| |||||    
T  55090104 tcactcaactctatgtcacccaagtgatatcc 55090135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 235 - 369
Target Start/End: Original strand, 31430459 - 31430590
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatga 334  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||   ||| |||| | |    
T  31430459 cgggtagcacttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgcttatgaaagagagagaaacacaaac---gtggcattgtaa 31430555  T
Q  335 ttgaccaatgtcaccgaactctatgttacccaagt 369  Q
    ||| ||||||||||| |||||||||| ||||||||    
T  31430556 ttggccaatgtcacccaactctatgtcacccaagt 31430590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 251 - 370
Target Start/End: Complemental strand, 52028673 - 52028554
Alignment:
Q  251 gacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccg 350  Q
    |||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||| ||||| |||||     
T  52028673 gacatagaattgggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacatcgtgattggccaatatcaccc 52028574  T
Q  351 aactctatgttacccaagtg 370  Q
    |||||||||| |||||||||    
T  52028573 aactctatgtcacccaagtg 52028554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 236 - 369
Target Start/End: Complemental strand, 42375158 - 42375016
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgac---------attgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    |||||||| ||||||||||||||||||||||||         ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||     
T  42375158 gggtagcacttgggtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgg 42375059  T
Q  327 cattatgattgaccaatgtcaccgaactctatgttacccaagt 369  Q
    |||| |||||||||||||||||| |||||||||| ||||||||    
T  42375058 cattgtgattgaccaatgtcacccaactctatgtcacccaagt 42375016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 235 - 326
Target Start/End: Original strand, 50384103 - 50384194
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  50384103 cgggtagcacttgggtgacatagagttgggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtga 50384194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 236 - 377
Target Start/End: Original strand, 24006069 - 24006202
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||||        ||||    
T  24006069 gggtagcacttgggtgacatacagttgggtgacattggccaatcacaatgacacaatgcttgtgaaagagagagaaacataaacattg--------tgat 24006160  T
Q  336 tgaccaatgtcaccgaactctatgttacccaagtgctatccg 377  Q
    ||  |||||||||| |||||||||| ||||||||||||||||    
T  24006161 tggtcaatgtcacccaactctatgtcacccaagtgctatccg 24006202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 236 - 349
Target Start/End: Complemental strand, 47661990 - 47661868
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattg---------accaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    |||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||||||||||||| |||||||     
T  47661990 gggtagcatttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgg 47661891  T
Q  327 cattatgattgaccaatgtcacc 349  Q
    |||| |||||| |||||||||||    
T  47661890 cattgtgattggccaatgtcacc 47661868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 235 - 349
Target Start/End: Original strand, 23444258 - 23444381
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgggtg---------acattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtg 325  Q
    |||||||||||||||| |||||||||||||||         ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  23444258 cgggtagcatttgggtaacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 23444357  T
Q  326 acattatgattgaccaatgtcacc 349  Q
     |||| |||||| |||||||||||    
T  23444358 gcattgtgattggccaatgtcacc 23444381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 28693925 - 28694008
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacatt 322  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28693925 tagcacttgggtgacataaagttggatgacattgaccaatcacaatatcacaatgtttgtgaaagagagagaaacacaaacatt 28694008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 6271814 - 6271728
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||    
T  6271814 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacc 6271728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 51265557 - 51265471
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||    
T  51265557 ggtgacattgaccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacc 51265471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 263 - 369
Target Start/End: Complemental strand, 53954722 - 53954616
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgtta 362  Q
    |||||||||| ||||| |||||||||||||| ||||||||||| ||||||||| | |||||||||||| |||||| ||||||||||| |||| ||| | |    
T  53954722 ggtgacattgtccaattacaatgtcacaatgcttgtgaaagagtgagaaacactagcattgtgacattgtgattggccaatgtcacccaactttatatca 53954623  T
Q  363 cccaagt 369  Q
    |||||||    
T  53954622 cccaagt 53954616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 35682278 - 35682192
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||  ||| ||||||| |||||| |||||||||||    
T  35682278 ggtgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatgtcacc 35682192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 367
Target Start/End: Complemental strand, 38714924 - 38714831
Alignment:
Q  274 ccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaa 367  Q
    |||||| |||||||||||||||||||||||| | ||||||| ||| ||| ||||||| |||||| ||||| ||||| |||||||||| ||||||    
T  38714924 ccaatctcaatgtcacaatgtttgtgaaagaaatagaaacataaatattatgacattgtgattggccaatatcacctaactctatgtcacccaa 38714831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 45591422 - 45591499
Alignment:
Q  249 gtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    |||| ||||||||||||| ||||   |||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  45591422 gtgatatagagttgggtggcattcgtcaatcataatgtcacaatgcttgtgaaagagagagaaacacaaacattgtga 45591499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 347
Target Start/End: Original strand, 26186039 - 26186124
Alignment:
Q  260 ttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtca 347  Q
    |||||||||||||  ||||||||||||||||||| |||||||  |||||||||||||| |||||||| ||| |||||| |||||||||    
T  26186039 ttgggtgacattggtcaatcacaatgtcacaatgcttgtgaa--agagagaaacacaagcattgtgaaattgtgattggccaatgtca 26186124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 25818401 - 25818462
Alignment:
Q  265 tgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  25818401 tgacattggtcaatcacaatgtcacaatgattgtgaaagagagagaaacacaatcattgtga 25818462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 31532716 - 31532801
Alignment:
Q  264 gtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||  |||||||||||||||||| | ||| ||||||||||||| |||||||||||||| || ||||||  ||||||||||    
T  31532716 gtgacattgttcaatcacaatgtcacaatatatgtaaaagagagagaaatacaaacattgtgacgttgtgattggtcaatgtcacc 31532801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 47404647 - 47404582
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatccgt 378  Q
    ||||| |||||||||||| |||||||||||||||||| |||||||||| |||||||||||| ||||    
T  47404647 cacaagcattgtgacattgtgattgaccaatgtcacccaactctatgtcacccaagtgctacccgt 47404582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 263 - 348
Target Start/End: Complemental strand, 47762720 - 47762635
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcac 348  Q
    ||||||||||  ||| || |||||||||||| |||||||||||||||||||| ||||||||| ||||| ||||||  |||||||||    
T  47762720 ggtgacattggtcaaccataatgtcacaatgcttgtgaaagagagagaaacataaacattgtaacattgtgattggtcaatgtcac 47762635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 56 - 210
Target Start/End: Original strand, 5616284 - 5616439
Alignment:
Q  56 tggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagtaaaaaactttattatgaactaggataat 155  Q
    ||||||||||||||||||| |||| ||||| |  ||||||| | |||| |||||||||||| ||||| | || |||   ||||||||||| | ||||| |    
T  5616284 tggaacattaagtctgactaaatcatgagatcccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatatt 5616383  T
Q  156 agtaaagcatgaagactattatgt-taaagactgatcaccacatttcatgggtcat 210  Q
    | ||||||||  |||||||||||| |  ||| |||| ||||||| |||||||||||    
T  5616384 aataaagcattgagactattatgtatgtagattgatgaccacatctcatgggtcat 5616439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 24006198 - 24006151
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgt 286  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24006198 tagcacttgggtgacatagagttgggtgacattgaccaatcacaatgt 24006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 286 - 349
Target Start/End: Original strand, 30861823 - 30861886
Alignment:
Q  286 tcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||| ||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||    
T  30861823 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacc 30861886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 52028557 - 52028611
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  52028557 ttgggtgacatagagttgggtgatattggccaatcacgatgtcacaatgtttgtg 52028611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 299
Target Start/End: Original strand, 40789192 - 40789241
Alignment:
Q  250 tgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  40789192 tgacatagagtttggtgacattggccaatcacaatgtcacaatgtttgtg 40789241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 55089876 - 55089933
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatg 293  Q
    ||||||||||| ||||||||||||||| |||||||||  |||||||||||||||||||    
T  55089876 gggtagcatttaggtgacatagagttgagtgacattggtcaatcacaatgtcacaatg 55089933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 50384167 - 50384107
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||| |||||||||||| |||||| ||||||||||| |||||||||| ||||||||||||    
T  50384167 cacaagcattgtgacattgtgattggccaatgtcacccaactctatgtcacccaagtgcta 50384107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 44380042 - 44379959
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtc 346  Q
    ||||| |||||||||||||||||| |||||  || | ||| |||||||||| ||| |||||||||||||| |||| ||||||||    
T  44380042 ggtgatattgaccaatcacaatgttacaatacttataaaatagagagaaacgcaagcattgtgacattataattggccaatgtc 44379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 376
Target Start/End: Complemental strand, 55090126 - 55089995
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatg 344  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||| |||||             ||||| |||||||||||| |||||||||||||    
T  55090126 ttgggtgacatagagttgagtgacattggtcaatcacaatgtcacaatgcttgtgtctctctctctttcacaagcattgtgacattgtgattgaccaatg 55090027  T
Q  345 tcaccgaactctatgttacccaagtgctatcc 376  Q
    ||||  |||||||||| ||||||||| |||||    
T  55090026 tcactcaactctatgtcacccaagtgatatcc 55089995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 42375018 - 42375072
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||| |||||    
T  42375018 ttgggtgacatagagttgggtgacattggtcaatcacaatgccacaatgcttgtg 42375072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 40789255 - 40789320
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatccgt 378  Q
    ||||| |||||||||||| |||||| ||||| ||||| |||||||||| |||||||||||| ||||    
T  40789255 cacaagcattgtgacattgtgattggccaatatcaccaaactctatgtcacccaagtgctacccgt 40789320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 30040803 - 30040719
Alignment:
Q  140 tatgaactaggataatagtaaagcatgaagactattatgt-taaagactgatcaccacatttcatgggtcatggatatgggatat 223  Q
    |||||| | |||||||| ||||||||  |||||||||||| || |||||||| ||||||| ||||||||||| |||||| |||||    
T  30040803 tatgaattgggataataataaagcatcgagactattatgtatatagactgatgaccacatctcatgggtcatagatatgagatat 30040719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 47404715 - 47404663
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttg 297  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||| |||    
T  47404715 ttgggtgacatagagttgggtgacattggtcaatcacaatgccacaatgcttg 47404663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 53954618 - 53954666
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatg 293  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  53954618 ttgggtgatataaagttgggtgacattggccaatcacaatgtcacaatg 53954666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 54716348 - 54716396
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaat 284  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  54716348 gggtagtatttgagtgacatagagttgggtgacattgatcaatcacaat 54716396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 31430517 - 31430463
Alignment:
Q  319 cattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    |||||||||||| ||||||  |||||||||| |||||||||| ||||||||||||    
T  31430517 cattgtgacattgtgattggtcaatgtcacccaactctatgtcacccaagtgcta 31430463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 8845268 - 8845345
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| |||||| |  |||||||  ||||||| |||||||||| ||||| ||||    
T  8845268 gtttaatggaacattaagtataacttaattgtgagatcccgttaaacataaggaaactattcttaaagtatccgtagt 8845345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 8858232 - 8858309
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| |||||| |  |||||||  ||||||| |||||||||| ||||| ||||    
T  8858232 gtttaatggaacattaagtataacttaattgtgagatcccgttaaacataaggaaactattcttaaagtatccgtagt 8858309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 11420980 - 11421073
Alignment:
Q  131 aaactttattatgaactaggataatagtaaagcatgaagactattatgt-taaagactgatcaccacatttcatgggtcatggatatgggatat 223  Q
    |||||||| |||||| |||||||||| |||||| |  |||||||||||| |  |||||||| ||||||| ||||| ||||| |||||| |||||    
T  11420980 aaactttaatatgaattaggataataataaagcttcgagactattatgtatgtagactgatgaccacatctcatgagtcatagatatgagatat 11421073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 18262277 - 18262354
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||  |||||||  ||||||| |||||| ||| ||||| ||||    
T  18262277 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaactattctcaaagtatccgtagt 18262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 18269138 - 18269215
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||  |||||||  ||||||| |||||| ||| ||||| ||||    
T  18269138 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaactattctcaaagtatccgtagt 18269215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 38714829 - 38714874
Alignment:
Q  243 atttgggtgacatagagttgggtgacattgaccaatcacaatgtca 288  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  38714829 atttgggtgacatagagttaggtgatattggccaatcacaatgtca 38714874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 868663 - 868739
Alignment:
Q  51 tttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    |||||||||||||||||| | ||||||| ||||||||  |||||||  ||||||| |||||| ||| ||||| ||||    
T  868663 tttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaactattctcaaagtatccgtagt 868739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 17285845 - 17285813
Alignment:
Q  260 ttgggtgacattgaccaatcacaatgtcacaat 292  Q
    |||||||||||||||||||||||||||||||||    
T  17285845 ttgggtgacattgaccaatcacaatgtcacaat 17285813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 24006132 - 24006072
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||| ||||||| |||| |||||| ||||||||||| |||| ||||| ||||||||||||    
T  24006132 cacaagcattgtgtcattgtgattggccaatgtcacccaactgtatgtcacccaagtgcta 24006072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 31430588 - 31430548
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatg 285  Q
    |||||||||||||||||||||||||||| ||||| ||||||    
T  31430588 ttgggtgacatagagttgggtgacattggccaattacaatg 31430548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 230
Target Start/End: Original strand, 5870399 - 5870482
Alignment:
Q  148 aggataatagtaaagcatgaagactattatgt-taaagactgatcaccacatttcatgggtcatggatatgggatatcatgtct 230  Q
    ||||||||| |||||| | ||||||||||||| |  |||||||| ||| ||| ||||||||||| |||||| ||||||| ||||    
T  5870399 aggataataataaagcgtcaagactattatgtatgtagactgatgaccgcatctcatgggtcatagatatgagatatcaagtct 5870482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 9712845 - 9712900
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaa 291  Q
    |||||||| |||||||||||||  || |||||||||| ||||||| ||||||||||    
T  9712845 gggtagcacttgggtgacatagcatttggtgacattggccaatcagaatgtcacaa 9712900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 302
Target Start/End: Original strand, 22592921 - 22592960
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaa 302  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  22592921 ggtgacattgaccaatcacaatgtcacgatctttgtgaaa 22592960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 28393276 - 28393205
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatc 121  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||||||| ||||    
T  28393276 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattcttaaagtatc 28393205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 376
Target Start/End: Complemental strand, 28693985 - 28693922
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatcc 376  Q
    |||||||||||||| ||| ||||||  |||||||| | |||| ||||| |||||||||||||||    
T  28693985 cacaaacattgtgatattgtgattggtcaatgtcatccaactttatgtcacccaagtgctatcc 28693922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 298
Target Start/End: Complemental strand, 31532801 - 31532766
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgt 298  Q
    ||||||||||||||||||||| ||||||||||||||    
T  31532801 ggtgacattgaccaatcacaacgtcacaatgtttgt 31532766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 1941691 - 1941781
Alignment:
Q  134 ctttattatgaactaggataatagtaaagcatgaagactattatgt-taaagactgatcaccacatttcatgggtcatggatatgggatat 223  Q
    ||||| |||||| |||||||||| |||||| |  |||||||||||| || |||||||| ||| ||| |||||||| || |||||| |||||    
T  1941691 ctttaatatgaattaggataataataaagcgtcgagactattatgtatatagactgatgaccgcatctcatgggttatagatatgagatat 1941781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 10677691 - 10677618
Alignment:
Q  53 taatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||| |||||||| ||||||||||| |||||| | |||||| ||| || |||||||||||| ||||| ||||    
T  10677691 taatggagcattaagtatgacttaatcgcgagaccca-ttaaacgaaatgatattattcttaaagtatccgtagt 10677618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 10891331 - 10891258
Alignment:
Q  53 taatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||| |||||||| ||||||||||| |||||| | |||||| ||| || |||||||||||| ||||| ||||    
T  10891331 taatggagcattaagtatgacttaatcgcgagaccca-ttaaacgaaatgatattattcttaaagtatccgtagt 10891258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 45591472 - 45591410
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatc 375  Q
    ||||| ||||||||||||||||||||| |||| |||| |||||||| | || |||||| ||||    
T  45591472 cacaagcattgtgacattatgattgacgaatgccacccaactctatatcacacaagtgttatc 45591410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 55089933 - 55089879
Alignment:
Q  319 cattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    |||||||||||| |||||||||||||||||  |||||||||| ||| || |||||    
T  55089933 cattgtgacattgtgattgaccaatgtcactcaactctatgtcacctaaatgcta 55089879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 4426745 - 4426669
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||  |||||||  |||| || |||||||||| ||||| ||||    
T  4426745 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataagg-aactattcttaaagtatccgtagt 4426669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 5668267 - 5668203
Alignment:
Q  51 tttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaa 116  Q
    ||||||||| |||||||| ||| |||||||||||||| | |||||  |||||| ||||||||||||    
T  5668267 tttaatggagcattaagtgtgatttaatcgtgagaccca-ttaaatgaaaggacattattcttaaa 5668203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 19926902 - 19926825
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  19926902 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 19926825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 272
Target Start/End: Complemental strand, 23444410 - 23444381
Alignment:
Q  243 atttgggtgacatagagttgggtgacattg 272  Q
    ||||||||||||||||||||||||||||||    
T  23444410 atttgggtgacatagagttgggtgacattg 23444381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 26970528 - 26970605
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  26970528 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 26970605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 49469934 - 49469983
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaa 312  Q
    ||||||| ||| |||||||| |||||||||  ||||||||||||||||||    
T  49469934 ggtgacaatgatcaatcacagtgtcacaattattgtgaaagagagagaaa 49469983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 5707386 - 5707462
Alignment:
Q  51 tttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    |||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  5707386 tttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 5707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 5714014 - 5714090
Alignment:
Q  51 tttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    |||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  5714014 tttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 5714090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 321 - 373
Target Start/End: Complemental strand, 9712900 - 9712848
Alignment:
Q  321 ttgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    |||||||||| |||||| ||||||||||| ||  |||||| ||||||||||||    
T  9712900 ttgtgacattctgattggccaatgtcaccaaatgctatgtcacccaagtgcta 9712848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 26186078 - 26186042
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  26186078 cacaagcattgtgacattgtgattgaccaatgtcacc 26186042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 47762635 - 47762667
Alignment:
Q  264 gtgacattgaccaatcacaatgtcacaatgttt 296  Q
    ||||||||||||||||||||||| |||||||||    
T  47762635 gtgacattgaccaatcacaatgttacaatgttt 47762667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 47762684 - 47762720
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  47762684 cacaagcattgtgacattatggttgaccaatgtcacc 47762720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 51265593 - 51265557
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattg 272  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  51265593 gggtagcacttgggtgacttagagttgggtgacattg 51265557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 373
Target Start/End: Original strand, 55516948 - 55516996
Alignment:
Q  325 gacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||||||||||||||||||||||| || | ||||| |||||| |||||    
T  55516948 gacattatgattgaccaatgtcaccaaattatatgtcacccaattgcta 55516996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 7e-47; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 249 - 376
Target Start/End: Original strand, 47677267 - 47677394
Alignment:
Q  249 gtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcac 348  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  47677267 gtgacatagagtttggtgacattgaccgatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattgatcaatgtcac 47677366  T
Q  349 cgaactctatgttacccaagtgctatcc 376  Q
    | |||||||||| || ||||||||||||    
T  47677367 ccaactctatgtcacacaagtgctatcc 47677394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 33689315 - 33689208
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||    
T  33689315 gggtagcacttgggtgacattgagttgggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgat 33689216  T
Q  336 tgaccaat 343  Q
    ||||||||    
T  33689215 tgaccaat 33689208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 250 - 376
Target Start/End: Original strand, 29031727 - 29031853
Alignment:
Q  250 tgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||||| ||||| ||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||| |||||    
T  29031727 tgacatagagttaggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtaattgaccaatatcacc 29031826  T
Q  350 gaactctatgttacccaagtgctatcc 376  Q
     |||||||||| || ||||||||||||    
T  29031827 taactctatgtcacacaagtgctatcc 29031853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 239 - 358
Target Start/End: Original strand, 30476476 - 30476595
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattga 338  Q
    ||||| ||| |||||| |||| | |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  30476476 tagcacttgtgtgacagagagctaggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattga 30476575  T
Q  339 ccaatgtcaccgaactctat 358  Q
    ||||||||||  ||||||||    
T  30476576 ccaatgtcacataactctat 30476595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 237 - 349
Target Start/End: Original strand, 49418691 - 49418803
Alignment:
Q  237 ggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgatt 336  Q
    ||||||| ||||||||||||||||||||||| ||||  |||||||||||||| ||| |||||||||||||||||||||||| |||| ||| ||||| |||    
T  49418691 ggtagcacttgggtgacatagagttgggtgatattggtcaatcacaatgtcataatatttgtgaaagagagagaaacacaagcattatgatattataatt 49418790  T
Q  337 gaccaatgtcacc 349  Q
    |||||||||||||    
T  49418791 gaccaatgtcacc 49418803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 263 - 357
Target Start/End: Original strand, 1801472 - 1801566
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactcta 357  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||||||    
T  1801472 ggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactcta 1801566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 236 - 349
Target Start/End: Original strand, 43139708 - 43139821
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    |||||||| ||| |||||||||||||||||||||| |  |||||||||||||| |||| ||||||||||||||||||||||| ||||||| |||| | ||    
T  43139708 gggtagcacttgagtgacatagagttgggtgacatcggtcaatcacaatgtcagaatgcttgtgaaagagagagaaacacaagcattgtggcattgttat 43139807  T
Q  336 tgaccaatgtcacc 349  Q
    || |||||||||||    
T  43139808 tggccaatgtcacc 43139821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 245 - 349
Target Start/End: Complemental strand, 18321781 - 18321677
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatg 344  Q
    |||| |||||||||||||| ||||||||  |||||||||||||||||||  ||||||| ||||| |||||||||| |||||||||| |||||||||||||    
T  18321781 ttggatgacatagagttggatgacattggtcaatcacaatgtcacaatgcatgtgaaaaagagaaaaacacaaactttgtgacattgtgattgaccaatg 18321682  T
Q  345 tcacc 349  Q
    |||||    
T  18321681 tcacc 18321677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 349
Target Start/End: Original strand, 51046059 - 51046185
Alignment:
Q  232 tcacgggtagcatttgggtgacatagagttgg---------gtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacatt 322  Q
    ||||||||||||||||| ||||||||||||||         |||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  51046059 tcacgggtagcatttggatgacatagagttggatgatattggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcatt 51046158  T
Q  323 gtgacattatgattgaccaatgtcacc 349  Q
     || |||| |||||| |||||||||||    
T  51046159 atggcattgtgattggccaatgtcacc 51046185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 41753076 - 41752990
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||| |||||| |||||||||||    
T  41753076 ggtgacattggccaatcacaatgccacaatgcttgtgaaagagaaagaaacacaaacattgtggcattgtgattggccaatgtcacc 41752990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 263 - 348
Target Start/End: Original strand, 30580782 - 30580867
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcac 348  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||| || ||||||||| |||||||||||||||||    
T  30580782 ggtgatattgaccaatcataatgtcacaatatttgtgaaagagatagaaacacaagcactgtgacattgtgattgaccaatgtcac 30580867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 343
Target Start/End: Original strand, 47492073 - 47492153
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaat 343  Q
    |||||||||| |||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| |||||| |||||    
T  47492073 ggtgacattggccaatcacaatgtcacaatgcttgtgaaaaagagagaaacacaagcattgtgacattgtgattggccaat 47492153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 260 - 349
Target Start/End: Complemental strand, 50550090 - 50550001
Alignment:
Q  260 ttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||| | ||| ||||||  ||||||||||    
T  50550090 ttgggtgacattgatcaatcataatgtcataatgtttgtgaaagagagagaaacacaagcattgtaatattgtgattggtcaatgtcacc 50550001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 349
Target Start/End: Original strand, 30734430 - 30734514
Alignment:
Q  265 tgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||  ||| ||||||| |||||| |||||||||||    
T  30734430 tgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatgtcacc 30734514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 50524802 - 50524730
Alignment:
Q  275 caatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtca 347  Q
    |||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  50524802 caatcacaatgttacgatgcttgtgaaagagagagaaacacaaacattgtgacattatgattggtcaatgtca 50524730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 297
Target Start/End: Complemental strand, 49414562 - 49414501
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttg 297  Q
    |||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  49414562 gggtagcacttgggtgacatagagttgggtgacattggccaattacaatgtcacaatgtttg 49414501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 47677391 - 47677331
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47677391 tagcacttgtgtgacatagagttgggtgacattgatcaatcacaatgtcacaatgtttgtg 47677331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 349
Target Start/End: Complemental strand, 55223373 - 55223258
Alignment:
Q  234 acgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatg 333  Q
    |||| ||||| |||||||||||||||||  |||| ||||  |||||| |||||||||||| |||||||||||||||||||| ||  ||| | | ||| ||    
T  55223373 acggatagcacttgggtgacatagagttaagtgatattggtcaatcataatgtcacaatgcttgtgaaagagagagaaacataagtattctaatattgtg 55223274  T
Q  334 attgaccaatgtcacc 349  Q
    |||||||||| |||||    
T  55223273 attgaccaatatcacc 55223258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 1801625 - 1801571
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  1801625 ttgggtgacatagagttgggtgacattggccaatcacaatgccacaatgtttgtg 1801571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 55223308 - 55223374
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatccgtc 379  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||    
T  55223308 cacaagcattgtgacattatgattgaccaatatcacttaactctatgtcacccaagtgctatccgtc 55223374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 360
Target Start/End: Original strand, 39385745 - 39385811
Alignment:
Q  294 tttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgt 360  Q
    ||||||||||||||||||| ||||| ||||| ||||| |||||| ||||||||||| ||||||||||    
T  39385745 tttgtgaaagagagagaaatacaaatattgtaacattgtgattggccaatgtcacccaactctatgt 39385811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 1801566 - 1801627
Alignment:
Q  308 agaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagt 369  Q
    |||||||||||||||||| |||| |||||| ||||||||||| |||||||||| ||||||||    
T  1801566 agaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgtcacccaagt 1801627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 49414501 - 49414559
Alignment:
Q  315 caaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    |||||||||||||||| | |||| ||||||||||| |||||||||| ||||||||||||    
T  49414501 caaacattgtgacattgtaattggccaatgtcacccaactctatgtcacccaagtgcta 49414559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 1272557 - 1272492
Alignment:
Q  311 aacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatcc 376  Q
    ||||||| |||||||||| | |||||| ||||||||||| |||||||||| ||| |||||||||||    
T  1272557 aacacaagcattgtgacaatttgattggccaatgtcaccaaactctatgtcacctaagtgctatcc 1272492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 30904354 - 30904289
Alignment:
Q  265 tgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacatt 330  Q
    ||||||| | |||||||||| ||||||| ||| | |||||||||||||||||| ||||||||||||    
T  30904354 tgacattaatcaatcacaatatcacaatatttataaaagagagagaaacacaagcattgtgacatt 30904289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 45103099 - 45103180
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattg---------accaatcacaatgtcacaatgtttgtgaaagagaga 308  Q
    |||||||| ||||||||||||||||||||||||||||         | ||||||||||||||||||| ||||||||||||||    
T  45103099 gggtagcacttgggtgacatagagttgggtgacattggtgatattgatcaatcacaatgtcacaatgcttgtgaaagagaga 45103180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 1801566 - 1801522
Alignment:
Q  255 tagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||| |||||||||||| |||||||||||||    
T  1801566 tagagttgggtgacattggccaatcacaatgccacaatgtttgtg 1801522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 33689252 - 33689312
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||| |||||||||||| |||||| ||||||||||| ||||| |||| ||||||||||||    
T  33689252 cacaagcattgtgacattgtgattggccaatgtcacccaactcaatgtcacccaagtgcta 33689312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 39385813 - 39385765
Alignment:
Q  250 tgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgt 298  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  39385813 tgacatagagttgggtgacattggccaatcacaatgttacaatatttgt 39385765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 49418753 - 49418693
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    |||||| ||| ||||||| |||||||||||| ||||| |||||||||| ||||||||||||    
T  49418753 cacaaatattatgacattgtgattgaccaatatcacccaactctatgtcacccaagtgcta 49418693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 18520043 - 18520110
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaat 117  Q
    ||||||||||||||||||| | ||||||| ||||||||  |||||||  ||||||| |||||||||||    
T  18520043 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaactattcttaaat 18520110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 30476613 - 30476550
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||| || ||||||||  |||||||||  ||||||||||||||||||| |||||    
T  30476613 gggtagcatttgggggatatagagttatgtgacattggtcaatcacaatgtcacaatgcttgtg 30476550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 17547059 - 17547112
Alignment:
Q  321 ttgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctat 374  Q
    ||||||||||||| ||||||||||||||| ||  |||||| |||||||||||||    
T  17547059 ttgtgacattatggttgaccaatgtcaccaaatgctatgtcacccaagtgctat 17547112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 18321733 - 18321790
Alignment:
Q  319 cattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatcc 376  Q
    |||||||||||| |||||||||||||||| | |||||||||| | ||||||| |||||    
T  18321733 cattgtgacattgtgattgaccaatgtcatccaactctatgtcatccaagtgttatcc 18321790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 18522728 - 18522805
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||||||| ||||| ||||    
T  18522728 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattcttaaagtatccgtagt 18522805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 29031776 - 29031711
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatccgt 378  Q
    ||||| |||||||||||| |||||||||||| ||||| |||||||||| |  |||||| |||||||    
T  29031776 cacaagcattgtgacattgtgattgaccaatatcacctaactctatgtcatgcaagtgttatccgt 29031711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 1272495 - 1272555
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||| || |||||||||||||| |||||||||| ||||||| | |||||||||| |||||    
T  1272495 tagcacttaggtgacatagagtttggtgacattggccaatcaaattgtcacaatgcttgtg 1272555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 1272597 - 1272561
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattg 272  Q
    |||||||| ||||||||||||||||||||||||||||    
T  1272597 gggtagcacttgggtgacatagagttgggtgacattg 1272561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 29031850 - 29031790
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||| ||| ||||||||||||| ||||| ||||  |||| ||||||||||||||||||||    
T  29031850 tagcacttgtgtgacatagagttaggtgatattggtcaattacaatgtcacaatgtttgtg 29031790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 51046135 - 51046099
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||||||||||||||||||| ||||||||||    
T  51046135 cacaaacattgtgacattatgattgatcaatgtcacc 51046099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 22894058 - 22894003
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaa 291  Q
    |||||||| ||||||||||| | | | ||||||||||||||| |||||||||||||    
T  22894058 gggtagcacttgggtgacattgtggttggtgacattgaccaaccacaatgtcacaa 22894003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 376
Target Start/End: Complemental strand, 30476536 - 30476473
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatcc 376  Q
    ||||| |||||||||||| |||||| ||||||||||| | |||| ||| || ||||||||||||    
T  30476536 cacaagcattgtgacattgtgattggccaatgtcacctagctctctgtcacacaagtgctatcc 30476473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 15342374 - 15342324
Alignment:
Q  37 gaataatttgttggtttaatggaacattaagtctgacttaatcgtgagacc 87  Q
    ||||| |||||| ||||||||||||||||||| | ||||||| ||||||||    
T  15342374 gaatagtttgttcgtttaatggaacattaagtataacttaattgtgagacc 15342324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 50524730 - 50524764
Alignment:
Q  265 tgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||| ||||||||||||||||||    
T  50524730 tgacattgaccaatcataatgtcacaatgtttgtg 50524764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 6110129 - 6110206
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  6110129 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 6110206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 10572734 - 10572657
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  10572734 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 10572657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 13211367 - 13211444
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  13211367 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 13211444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 15601026 - 15600949
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  15601026 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 15600949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 15607571 - 15607494
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  15607571 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 15607494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 17781260 - 17781183
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  17781260 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 17781183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 19089887 - 19089810
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  || |||| |||||||||| ||||| ||||    
T  19089887 gtttaatggaacattaagtataacttaattgtgagacccctttaaacataatgaaactattcttaaagtatccgtagt 19089810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 289
Target Start/End: Original strand, 20496482 - 20496535
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcac 289  Q
    |||||||| || |||||||| | | | |||||||||||||||||||||||||||    
T  20496482 gggtagcactttggtgacattgtggtcggtgacattgaccaatcacaatgtcac 20496535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 312
Target Start/End: Original strand, 36417050 - 36417103
Alignment:
Q  260 ttgggtgacattgaccaatcac-aatgtcacaatgtttgtgaaagagagagaaa 312  Q
    |||||||||||||| ||||||| ||||||| ||| ||||||||||||| |||||    
T  36417050 ttgggtgacattgaacaatcacaaatgtcataatctttgtgaaagagacagaaa 36417103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 272
Target Start/End: Complemental strand, 43139850 - 43139821
Alignment:
Q  243 atttgggtgacatagagttgggtgacattg 272  Q
    ||||||||||||||||||||||||||||||    
T  43139850 atttgggtgacatagagttgggtgacattg 43139821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 14147038 - 14147078
Alignment:
Q  183 agactgatcaccacatttcatgggtcatggatatgggatat 223  Q
    |||||||| ||||||| |||||||||||||||||| |||||    
T  14147038 agactgatgaccacatctcatgggtcatggatatgagatat 14147078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 18640887 - 18640811
Alignment:
Q  51 tttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    |||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  18640887 tttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 18640811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 30734550 - 30734514
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattg 272  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  30734550 gggtagcacttgggtgacatagagttaggtgacattg 30734514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 41752990 - 41753026
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||| |||||||||||| |||||||||||||    
T  41752990 ggtgacattggccaatcacaatgccacaatgtttgtg 41753026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 50550051 - 50550087
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  50550051 cacaaacattatgacattatgattgatcaatgtcacc 50550087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 91; Significance: 7e-44; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 247 - 369
Target Start/End: Complemental strand, 63885 - 63763
Alignment:
Q  247 gggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtc 346  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  63885 gggtgatatagagttgggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtc 63786  T
Q  347 accgaactctatgttacccaagt 369  Q
    ||| |||||||||| ||||||||    
T  63785 acccaactctatgtcacccaagt 63763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 63765 - 63819
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  63765 ttgggtgacatagagttgggtgacattggccaatcacaatgccacaatgtttgtg 63819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 63833 - 63878
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctat 358  Q
    ||||| |||||||||||| |||||| ||||||||||| ||||||||    
T  63833 cacaagcattgtgacattgtgattggccaatgtcacccaactctat 63878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 236 - 369
Target Start/End: Original strand, 29053313 - 29053446
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    ||||| |||||||||||||||||||| |||||||||| |||||||||||| | ||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  29053313 gggtaacatttgggtgacatagagtttggtgacattggccaatcacaatgcctcaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgat 29053412  T
Q  336 tgaccaatgtcaccgaactctatgttacccaagt 369  Q
    || ||||||||||| |||||||||| ||||||||    
T  29053413 tggccaatgtcacccaactctatgtcacccaagt 29053446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 239 - 349
Target Start/End: Original strand, 27028795 - 27028905
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattga 338  Q
    ||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||    
T  27028795 tagcacttgggtgacatagagttgggtaacattggacaatcacaatgtcacaatgcttctgaaagagagagaaacacaaacattgtgacattgtgattga 27028894  T
Q  339 ccaatgtcacc 349  Q
    |||||||||||    
T  27028895 ccaatgtcacc 27028905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 245 - 349
Target Start/End: Original strand, 34854703 - 34854807
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatg 344  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||| |||||||||||||    
T  34854703 ttgggtgacatagagtttggtgacattggccaatcacaatgccacaatgcttgtgaaagagatagaaacacaaacattgtggcattgtgattgaccaatg 34854802  T
Q  345 tcacc 349  Q
    |||||    
T  34854803 tcacc 34854807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 234 - 349
Target Start/End: Complemental strand, 11017019 - 11016895
Alignment:
Q  234 acgggtagcatttgggtgacatagagttgggtgacattg---------accaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgt 324  Q
    |||||||||| ||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11017019 acgggtagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgt 11016920  T
Q  325 gacattatgattgaccaatgtcacc 349  Q
    | |||| |||||| |||||||||||    
T  11016919 ggcattgtgattggccaatgtcacc 11016895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 233 - 349
Target Start/End: Original strand, 41018224 - 41018340
Alignment:
Q  233 cacgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattat 332  Q
    ||||||||||| |||| ||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||||| |||| |    
T  41018224 cacgggtagcacttggatgacatagagttgggtgacattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtggcattgt 41018323  T
Q  333 gattgaccaatgtcacc 349  Q
    |||||  ||||||||||    
T  41018324 gattggtcaatgtcacc 41018340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 240 - 367
Target Start/End: Complemental strand, 4649457 - 4649328
Alignment:
Q  240 agcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagaga--gagaaacacaaacattgtgacattatgattg 337  Q
    |||| ||| ||||||||||||| ||||||||||  ||||||||||||||| ||| ||||||||||||  ||||||||||| ||||||  |||| ||||||    
T  4649457 agcaattgagtgacatagagtttggtgacattggtcaatcacaatgtcacgatgcttgtgaaagagagagagaaacacaagcattgtagcattgtgattg 4649358  T
Q  338 accaatgtcaccgaactctatgttacccaa 367  Q
    |||||||||||| |||||||||| ||||||    
T  4649357 accaatgtcacccaactctatgtcacccaa 4649328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 236 - 349
Target Start/End: Original strand, 45231853 - 45231962
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||||||||||||| || |||||| ||||| ||||    
T  45231853 gggtaacacttgggtgacatagagttgggtgacattgaccaatcacaatgccac----tttgtgaaagagagagaaacaaaagcattgtaacattgtgat 45231948  T
Q  336 tgaccaatgtcacc 349  Q
    || |||||||||||    
T  45231949 tggccaatgtcacc 45231962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 15027654 - 15027568
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||||||  ||||||||||    
T  15027654 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggtattgtgattggtcaatgtcacc 15027568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 260 - 349
Target Start/End: Original strand, 7671934 - 7672023
Alignment:
Q  260 ttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||| |||||| |||||||||||    
T  7671934 ttgggtgacattagccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacc 7672023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 236 - 348
Target Start/End: Complemental strand, 10419597 - 10419485
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    ||||| || |||||| |||||||||| |||||||||| |  |||||||||||||||   |||||||||||||||||||||||  ||||| ||||||||||    
T  10419597 gggtaacacttgggtaacatagagtttggtgacattggctgatcacaatgtcacaaaacttgtgaaagagagagaaacacaagtattgtaacattatgat 10419498  T
Q  336 tgaccaatgtcac 348  Q
    |||||||||||||    
T  10419497 tgaccaatgtcac 10419485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 236 - 367
Target Start/End: Complemental strand, 42628443 - 42628303
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattga---------ccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    |||||||| ||||||||||||||||||||||||||||          |||||||||||||| ||||| |||||||||||||||||||| || |||||||     
T  42628443 gggtagcacttgggtgacatagagttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattgtgg 42628344  T
Q  327 cattatgattgaccaatgtcaccgaactctatgttacccaa 367  Q
    |||| ||||||  |||||||||| |||||||||| ||||||    
T  42628343 cattgtgattggtcaatgtcacccaactctatgtcacccaa 42628303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 263 - 343
Target Start/End: Complemental strand, 48000849 - 48000769
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaat 343  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||| |||||| |||||    
T  48000849 ggtgacattgaccaatcacaatgccacaatgtctgtgaaagagagagaaacacaaacattgtggcattgtgattggccaat 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 4290657 - 4290571
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||||||| | ||||||| |||| |||||||||||| |||||    
T  4290657 ggtgacattggccaatcacaatgtcacaattcttgtgaaagagagagaaacacgagcattgtggcattgtgattgaccaatatcacc 4290571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 38975917 - 38975835
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgt 345  Q
    ||||||||||| |||| | |||| ||||||| ||||||||||||||||||||||| ||||||| |||| ||||||||||||||    
T  38975917 ggtgacattgatcaattataatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgt 38975835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 29053444 - 29053390
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  29053444 ttgggtgacatagagttgggtgacattggccaatcacaatgccacaatgtttgtg 29053390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 42628301 - 42628351
Alignment:
Q  243 atttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatg 293  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42628301 atttgggtgacatagagttgggtgacattgaccaatcacaatgccacaatg 42628351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 41945955 - 41945883
Alignment:
Q  275 caatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtca 347  Q
    |||||||||||| |||||| |||||||||||| | |||| |||||||| |||||||||||||||| |||||||    
T  41945955 caatcacaatgttacaatgcttgtgaaagagaaaaaaacgcaaacattatgacattatgattgactaatgtca 41945883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 22764753 - 22764812
Alignment:
Q  290 aatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||| ||||| |||||    
T  22764753 aatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatatcacc 22764812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 18257997 - 18257907
Alignment:
Q  37 gaataatttgttggtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    |||||||| ||  ||||||||||||||||||| ||||||||| ||||||||   ||||||  ||||| |||||||||||| ||||| ||||    
T  18257997 gaataattagtctgtttaatggaacattaagtatgacttaattgtgagaccccattaaacacaaggacattattcttaaagtatccgtagt 18257907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 48000720 - 48000769
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaa 312  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  48000720 ggtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaa 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 4649327 - 4649382
Alignment:
Q  244 tttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||||||||||||||  |||||||||||  |||||| |||||    
T  4649327 tttgggtgacatagagttgggtgacattggtcaatcacaatgctacaatgcttgtg 4649382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 13392218 - 13392292
Alignment:
Q  52 ttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    |||||||| |||||||| |||||||||||||||||| | |||||  |||||| |||||||||||| |||| |||||    
T  13392218 ttaatggagcattaagtgtgacttaatcgtgagaccca-ttaaatgaaaggacattattcttaaagtatcaatagt 13392292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 289
Target Start/End: Original strand, 25001349 - 25001399
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcac 289  Q
    |||||||||||||| |||||||| ||||||||||  |||||||||||||||    
T  25001349 tagcatttgggtgaaatagagtttggtgacattggacaatcacaatgtcac 25001399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 27028849 - 27028795
Alignment:
Q  319 cattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    |||||||||||| |||||| ||||||| ||| |||||||||| ||||||||||||    
T  27028849 cattgtgacattgtgattgtccaatgttacccaactctatgtcacccaagtgcta 27028795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 4649398 - 4649463
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatccgt 378  Q
    ||||| ||| |||||||| |||||||||||||||||| |||||||||| || ||| |||| |||||    
T  4649398 cacaagcatcgtgacattgtgattgaccaatgtcaccaaactctatgtcactcaattgctgtccgt 4649463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 15152508 - 15152585
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||  |||||||  | ||||| |||||||||| ||||| ||||    
T  15152508 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacatacggaaactattcttaaagtatccgtagt 15152585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 15999946 - 16000039
Alignment:
Q  131 aaactttattatgaactaggataatagtaaagcatgaagactattatgt-taaagactgatcaccacatttcatgggtcatggatatgggatat 223  Q
    |||||||| |||||| |||||||||| |||||| |  ||||| |||||| |  |||||||| ||||||| ||||||||||| |||||| |||||    
T  15999946 aaactttaatatgaattaggataataataaagcgtcgagacttttatgtatgcagactgatgaccacatatcatgggtcatagatatgagatat 16000039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 34854757 - 34854700
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtg 370  Q
    ||||| ||||||| |||| |||||| ||||||||||| |||||||||| |||||||||    
T  34854757 cacaagcattgtggcattgtgattggccaatgtcaccaaactctatgtcacccaagtg 34854700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 41018290 - 41018225
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatccgt 378  Q
    ||||| ||||| |||||| |||||| ||||||||||| |||||||||| | |||||||||| ||||    
T  41018290 cacaagcattgggacattgtgattggccaatgtcacccaactctatgtcatccaagtgctacccgt 41018225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 30165327 - 30165387
Alignment:
Q  317 aacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatccg 377  Q
    |||||| ||||||| |||||||||||||||||| |||||||| | || ||||| |||||||    
T  30165327 aacattatgacattgtgattgaccaatgtcacccaactctatatcacacaagtcctatccg 30165387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 30217504 - 30217564
Alignment:
Q  287 cacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtca 347  Q
    ||||||| |||||||||||||||||||| ||||||| ||| ||| |||||| | |||||||    
T  30217504 cacaatgcttgtgaaagagagagaaacataaacattttgatattgtgattggcgaatgtca 30217564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 234 - 272
Target Start/End: Complemental strand, 4290695 - 4290657
Alignment:
Q  234 acgggtagcatttgggtgacatagagttgggtgacattg 272  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  4290695 acgggtagcacttgggtgacatacagttgggtgacattg 4290657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 7396258 - 7396320
Alignment:
Q  54 aatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaa 116  Q
    ||||||||||||||| |||||||||| |||||||   ||||||  ||| ||||||||||||||    
T  7396258 aatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 7672025 - 7671987
Alignment:
Q  261 tgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  7672025 tgggtgacattggccaatcacaatgccacaatgtttgtg 7671987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 30165373 - 30165327
Alignment:
Q  249 gtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtt 295  Q
    |||| |||||||||||||||||||  |||||||||||||| ||||||    
T  30165373 gtgatatagagttgggtgacattggtcaatcacaatgtcataatgtt 30165327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 10419542 - 10419591
Alignment:
Q  321 ttgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtg 370  Q
    |||||||||| ||||   ||||||||||| ||||||||||||||||||||    
T  10419542 ttgtgacattgtgatcagccaatgtcaccaaactctatgttacccaagtg 10419591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 349
Target Start/End: Complemental strand, 27028795 - 27028754
Alignment:
Q  308 agaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||| |||||||||||| |||||| |||||||||||    
T  27028795 agaaacacaagcattgtgacattgtgattgtccaatgtcacc 27028754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 29327849 - 29327926
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  29327849 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 29327926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 11016979 - 11017019
Alignment:
Q  338 accaatgtcaccgaactctatgttacccaagtgctatccgt 378  Q
    |||||||||||| |||||||||| |||||||||||| ||||    
T  11016979 accaatgtcacccaactctatgtcacccaagtgctacccgt 11017019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 15027568 - 15027604
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||||||  |||||||||||||    
T  15027568 ggtgacattgaccaatcacaataccacaatgtttgtg 15027604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 22764812 - 22764776
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  22764812 ggtgatattggccaatcacaatgtcacaatgtttgtg 22764776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 375
Target Start/End: Complemental strand, 25001399 - 25001347
Alignment:
Q  323 gtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatc 375  Q
    |||||||| |||||| ||||||||||| |||||||| | |||||| |||||||    
T  25001399 gtgacattgtgattgtccaatgtcaccaaactctatttcacccaaatgctatc 25001347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 27028905 - 27028869
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||  |||||||||||||||||||||||||    
T  27028905 ggtgacattggtcaatcacaatgtcacaatgtttgtg 27028869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 4e-42; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 242 - 349
Target Start/End: Complemental strand, 16439271 - 16439164
Alignment:
Q  242 catttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgacca 341  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  16439271 catttgtgtgacatagagttgggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgacca 16439172  T
Q  342 atgtcacc 349  Q
    ||||||||    
T  16439171 atgtcacc 16439164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 236 - 349
Target Start/End: Original strand, 3180059 - 3180172
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    |||||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  3180059 gggtagcacttgtgtgacatagagttgggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgat 3180158  T
Q  336 tgaccaatgtcacc 349  Q
    ||||||||||||||    
T  3180159 tgaccaatgtcacc 3180172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 263 - 369
Target Start/End: Complemental strand, 3899951 - 3899845
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgtta 362  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||| |||||||||| |    
T  3899951 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacccaactctatgtca 3899852  T
Q  363 cccaagt 369  Q
    |||||||    
T  3899851 cccaagt 3899845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 235 - 369
Target Start/End: Complemental strand, 16971293 - 16971150
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgggtgacattg---------accaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtg 325  Q
    ||||||||| ||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  16971293 cgggtagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 16971194  T
Q  326 acattatgattgaccaatgtcaccgaactctatgttacccaagt 369  Q
     |||| |||||| ||||||||||| || ||||||| ||||||||    
T  16971193 gcattgtgattggccaatgtcacccaagtctatgtcacccaagt 16971150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 249 - 378
Target Start/End: Complemental strand, 16802570 - 16802441
Alignment:
Q  249 gtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcac 348  Q
    |||| ||||||||| ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||| ||||| |||||| ||||||||||    
T  16802570 gtgatatagagttgagtgacattgaccaatcagaatgtcacaatgcttgtaaaagagagagaaacacaaatattgttacattgtgattggccaatgtcac 16802471  T
Q  349 cgaactctatgttacccaagtgctatccgt 378  Q
    | || | ||||||||| |||||||| ||||    
T  16802470 ccaaatttatgttacctaagtgctacccgt 16802441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 263 - 373
Target Start/End: Complemental strand, 28819029 - 28818919
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgtta 362  Q
    ||||||||||  |||||| |||||||||||| |||||||||||||||||| ||||  ||||||||||| |||||||||||||||||| |||||||||| |    
T  28819029 ggtgacattggtcaatcataatgtcacaatgcttgtgaaagagagagaaatacaagtattgtgacattgtgattgaccaatgtcacccaactctatgtca 28818930  T
Q  363 cccaagtgcta 373  Q
    |||||||||||    
T  28818929 cccaagtgcta 28818919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 349
Target Start/End: Complemental strand, 19598470 - 19598358
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    ||||| || ||||||||||||||||||||||||||| |||||||| ||||||| |||| ||||||||||||||||||||||| |||||||  ||| ||||    
T  19598470 gggtaacacttgggtgacatagagttgggtgacattaaccaatcataatgtca-aatgcttgtgaaagagagagaaacacaagcattgtggtattgtgat 19598372  T
Q  336 tgaccaatgtcacc 349  Q
    ||||||||||||||    
T  19598371 tgaccaatgtcacc 19598358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 234 - 349
Target Start/End: Original strand, 30117816 - 30117940
Alignment:
Q  234 acgggtagcatttgggtgacatagagttgggtgacattg---------accaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgt 324  Q
    ||||||||||||||||||| |||||||||||||||||||         |||||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  30117816 acgggtagcatttgggtgatatagagttgggtgacattggtgatattgaccaatcacaatgtcacaatgtttatgaaaaagagagaaacacaagcattgt 30117915  T
Q  325 gacattatgattgaccaatgtcacc 349  Q
    | ||||||||||||||||| |||||    
T  30117916 ggcattatgattgaccaatatcacc 30117940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 19655270 - 19655184
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||| |||||||||||    
T  19655270 ggtgacattgtccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacc 19655184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 29699479 - 29699393
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||    
T  29699479 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacc 29699393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 291209 - 291123
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| ||||||| |||| |||||| |||||||||||    
T  291209 ggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagaaagaaatacaagcattgtggcattgtgattggccaatgtcacc 291123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 236 - 369
Target Start/End: Complemental strand, 2953338 - 2953204
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgac---------attgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    |||||||| ||||||||||||||||||||||||         |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||       
T  2953338 gggtagcacttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg--- 2953242  T
Q  327 cattatgattgaccaatgtcaccgaactctatgttacccaagt 369  Q
         |||||||||||||||||| |||||||||| ||||||||    
T  2953241 -----tgattgaccaatgtcacccaactctatgtcacccaagt 2953204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 38134405 - 38134508
Alignment:
Q  269 attgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaag 368  Q
    |||| |||||||||||||||||||| | |||||||||| |||||||||| |||||||||||| |||||| ||||| ||| | ||||||||||  ||||||    
T  38134405 attggccaatcacaatgtcacaatgctagtgaaagagaaagaaacacaagcattgtgacattgtgattggccaatatcatccaactctatgtcgcccaag 38134504  T
Q  369 tgct 372  Q
    ||||    
T  38134505 tgct 38134508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 373
Target Start/End: Complemental strand, 26662498 - 26662401
Alignment:
Q  276 aatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    |||||||||||||||||  |||||||| |||||||||||||| || ||| ||||| ||||||  |||||||||| |||||||||| || |||||||||    
T  26662498 aatcacaatgtcacaatacttgtgaaaaagagagaaacacaagcaatgtaacattgtgattggtcaatgtcacccaactctatgtcacacaagtgcta 26662401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 373
Target Start/End: Complemental strand, 26934093 - 26933996
Alignment:
Q  276 aatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    |||||||||||||||||  |||||||| |||||||||||||| || ||| ||||| ||||||  |||||||||| |||||||||| || |||||||||    
T  26934093 aatcacaatgtcacaatacttgtgaaaaagagagaaacacaagcaatgtaacattgtgattggtcaatgtcacccaactctatgtcacacaagtgcta 26933996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 349
Target Start/End: Complemental strand, 12913903 - 12913829
Alignment:
Q  275 caatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||||||| |||| |||||||||||||||| ||||||  ||||||||||| |||||| |||||||||||    
T  12913903 caatcacaatgtcataatgcttgtgaaagagagagatacacaagaattgtgacattgtgattggccaatgtcacc 12913829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 2935829 - 2935923
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgacc---aatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacatt 330  Q
    |||||||| ||||| ||||||||| |||||||| |     ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  2935829 tagcatttaggtgatatagagttgtgtgacattaattgttaatcacaatgtcataatgtttgtaaaagatagagaaacacaaacattgtgacatt 2935923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 3180122 - 3180062
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||| || |||||||||    
T  3180122 cacaaacattgtgacattatgattgatcaatgtcacccaactctatgtcacacaagtgcta 3180062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 28818916 - 28818972
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaat 292  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  28818916 gggtagcacttgggtgacatagagttgggtgacattggtcaatcacaatgtcacaat 28818972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 2093963 - 2094022
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacatt 322  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  2093963 ggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcatt 2094022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 26662398 - 26662461
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||| || |||||    
T  26662398 gggtagcacttgtgtgacatagagttgggtgacattgaccaatcacaatgttacattgcttgtg 26662461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 26933993 - 26934056
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||| || |||||    
T  26933993 gggtagcacttgtgtgacatagagttgggtgacattgaccaatcacaatgttacattgcttgtg 26934056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 3899847 - 3899901
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  3899847 ttgggtgacatagagttgggtgacattggccaatcacaatgccacaatgcttgtg 3899901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 16971152 - 16971206
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||||| |||||    
T  16971152 ttgggtgacatagacttgggtgacattggccaatcacaatgccacaatgcttgtg 16971206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 27347619 - 27347554
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaa 116  Q
    |||||||||| |||||||| |||||||||||||||||| | |||||| |||||| ||||||||||||    
T  27347619 gtttaatggagcattaagtgtgacttaatcgtgagaccca-ttaaacgaaaggacattattcttaaa 27347554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 299
Target Start/End: Complemental strand, 38134508 - 38134449
Alignment:
Q  240 agcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||| ||||| ||||||||||||| ||| |||| |||||||||||||||||||| |||||    
T  38134508 agcacttgggcgacatagagttggatgatattggccaatcacaatgtcacaatgcttgtg 38134449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 376
Target Start/End: Complemental strand, 2356383 - 2356274
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgtta 362  Q
    |||||||||| ||||||||| |||||||||| || |||||||||||  ||||||| |||| | ||||| | |||| | ||||||||| |||||||||| |    
T  2356383 ggtgacattggccaatcaca-tgtcacaatgcttatgaaagagaga--aacacaagcattataacattgtaattgcctaatgtcacc-aactctatgtca 2356288  T
Q  363 cccaagtgctatcc 376  Q
    | ||| ||||||||    
T  2356287 cacaaatgctatcc 2356274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 299
Target Start/End: Original strand, 16802440 - 16802506
Alignment:
Q  233 cacgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||| || ||| ||||| | ||||||||||||| ||||||||||||| ||||| ||||||    
T  16802440 cacgggtagcacttaggtaacataaatttgggtgacattggccaatcacaatgtaacaatatttgtg 16802506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 17285874 - 17285797
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| |||||||||||||| |||    ||||| ||| || |||||||||||| ||| ||||||    
T  17285874 gtttaatggaacattaagtgtgacttaatcgtgaaaccctagtaaactaaatgacattattcttaaagtattcatagt 17285797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 37325556 - 37325629
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagaga 308  Q
    ||||||||| || |||||||| |  || |||| ||||||| |||||||||||||||||  ||||||||||||||    
T  37325556 cgggtagcacttcggtgacattgcatttggtggcattgacgaatcacaatgtcacaatccttgtgaaagagaga 37325629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 2953206 - 2953246
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatg 285  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  2953206 ttgggtgacatagagttgggtgacattggtcaatcacaatg 2953246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 18807175 - 18807099
Alignment:
Q  51 tttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    |||||||||||||||||| |||||||||||||||||    |||||  || ||| |||||||||||| |||| |||||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaaataatggacattattcttaaagtatctatagt 18807099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 19707360 - 19707288
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatcc 122  Q
    ||||||||||||||||||| | ||||||| ||||||||  |||||||  ||||||  |||||||||| |||||    
T  19707360 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaatctattcttaaaatatcc 19707288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 19714640 - 19714568
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatcc 122  Q
    ||||||||||||||||||| | ||||||| ||||||||  |||||||  ||||||  |||||||||| |||||    
T  19714640 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaatctattcttaaaatatcc 19714568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 28818993 - 28819029
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||| |||||||||||||||||||||||||||||||    
T  28818993 cacaagcattgtgacattatgattgaccaatgtcacc 28819029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 326
Target Start/End: Complemental strand, 228450 - 228399
Alignment:
Q  275 caatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    |||||||||||||| |||| |||| ||||||||| ||||||||| |||||||    
T  228450 caatcacaatgtcaaaatgcttgtaaaagagagaaaaacacaaatattgtga 228399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 16439214 - 16439261
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgt 360  Q
    ||||| |||||||||||| ||||||| |||||||||| ||||||||||    
T  16439214 cacaagcattgtgacattgtgattgatcaatgtcacccaactctatgt 16439261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 6912389 - 6912355
Alignment:
Q  249 gtgacatagagttgggtgacattgaccaatcacaa 283  Q
    ||||||||||||| |||||||||||||||||||||    
T  6912389 gtgacatagagtttggtgacattgaccaatcacaa 6912355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 5097619 - 5097708
Alignment:
Q  135 tttattatgaactaggataatagtaaagcatgaagactattatgt-taaagactgatcaccacatttcatgggtcatggatatgggatat 223  Q
    |||| |||||| |||||||||| |||||| |  |||||||||||| |  |||||||| || |||| ||||||||||| |||||| |||||    
T  5097619 tttaatatgaattaggataataataaagcgtcgagactattatgtatgtagactgatgactacatctcatgggtcatagatatgagatat 5097708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 6912295 - 6912360
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtga 300  Q
    ||||||||| |||  |||||||||||| | |||||||   ||||||||||||||||||| ||||||    
T  6912295 cgggtagcacttgtatgacatagagttagttgacattagtcaatcacaatgtcacaatgcttgtga 6912360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 14167178 - 14167223
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagaga 308  Q
    |||||| ||||| |||||||||||||||||  ||||||||||||||    
T  14167178 ggtgactttgacgaatcacaatgtcacaatccttgtgaaagagaga 14167223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 18570005 - 18569928
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||| ||||||||||| | ||||||| ||||||||  |||||||  ||||||| || ||||||| ||||| ||||    
T  18570005 gtttaattgaacattaagtataacttaattgtgagaccccgttaaacataaggaaactactcttaaagtatccgtagt 18569928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 39535428 - 39535509
Alignment:
Q  131 aaactttattatgaactaggataatagtaaagcatgaagactattatgt-taaagactgatcaccacatttcatgggtcatg 211  Q
    |||||||| |||||| | |||||||| |||||| | ||||||||||||| |  |||||||| ||||||| |||| |||||||    
T  39535428 aaactttaatatgaattgggataataataaagcgtcaagactattatgtatgtagactgatgaccacatctcataggtcatg 39535509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 291173 - 291209
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  291173 cacaaacattgtgacattgtgattgatcaatgtcacc 291209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 291245 - 291209
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattg 272  Q
    |||||||| |||||||| |||||||||||||||||||    
T  291245 gggtagcacttgggtgatatagagttgggtgacattg 291209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 6912359 - 6912299
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||| |||||||||||| |||||||| ||||||| | |||||||||| |  |||||||||    
T  6912359 cacaagcattgtgacattgtgattgactaatgtcaactaactctatgtcatacaagtgcta 6912299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 19655184 - 19655220
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||| |||||||||||| |||||||||||||    
T  19655184 ggtgacattggccaatcacaatgccacaatgtttgtg 19655220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 22547159 - 22547123
Alignment:
Q  49 ggtttaatggaacattaagtctgacttaatcgtgaga 85  Q
    |||||||||||||||||||| | ||||||||||||||    
T  22547159 ggtttaatggaacattaagtataacttaatcgtgaga 22547123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 239 - 360
Target Start/End: Original strand, 10521851 - 10521972
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattga 338  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||||||| || |||||||||||||||||||| |||| ||||||| |||||||    
T  10521851 tagcacttgggtgacatagagtttggtgacattggccaatcacaatgtcacaatgcttatgaaagagagagaaacacaagcattatgacattgtgattga 10521950  T
Q  339 ccaatgtcaccgaactctatgt 360  Q
    ||||||||||  ||||||||||    
T  10521951 ccaatgtcactcaactctatgt 10521972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 263 - 369
Target Start/End: Complemental strand, 12343212 - 12343106
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgtta 362  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||| |||||||| ||||||||| |||||||||| |    
T  12343212 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgactaatgtcacccaactctatgtca 12343113  T
Q  363 cccaagt 369  Q
    |||||||    
T  12343112 cccaagt 12343106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 236 - 349
Target Start/End: Original strand, 551164 - 551277
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    ||||| || ||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  551164 gggtaacacttgggtggcatagagttgggtgacattggtcaatcacaatgccacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgat 551263  T
Q  336 tgaccaatgtcacc 349  Q
    || |||||||||||    
T  551264 tggccaatgtcacc 551277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 263 - 376
Target Start/End: Original strand, 24618627 - 24618740
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgtta 362  Q
    ||||||||||| |||||||||||||| |||| || |||||||||||||||||||| |||||||||||| ||||||  ||| |||||| |||||||||| |    
T  24618627 ggtgacattgatcaatcacaatgtcataatgcttatgaaagagagagaaacacaagcattgtgacattgtgattggtcaacgtcacccaactctatgtca 24618726  T
Q  363 cccaagtgctatcc 376  Q
    ||||||||||||||    
T  24618727 cccaagtgctatcc 24618740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 234 - 373
Target Start/End: Original strand, 2315301 - 2315440
Alignment:
Q  234 acgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatg 333  Q
    |||| ||||||||| ||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| || |||| ||  ||| ||    
T  2315301 acggatagcatttgtgtgacaataagttgggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagagcgaaacataagcattatggtattgtg 2315400  T
Q  334 attgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    |||   |||||||||| |||||||||| || |||||||||    
T  2315401 attattcaatgtcacctaactctatgtcacacaagtgcta 2315440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 265 - 349
Target Start/End: Complemental strand, 17751012 - 17750928
Alignment:
Q  265 tgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||| || ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  17751012 tgacattggccgatcacaatgtcacaatgcttgtgaaagagagataaatacaaacattgtgacattgtgattgaccaatgtcacc 17750928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 291 - 373
Target Start/End: Complemental strand, 31654389 - 31654307
Alignment:
Q  291 atgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||||||| | ||||||||||||    
T  31654389 atgtttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcacccaactctatatcacccaagtgcta 31654307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 13043605 - 13043489
Alignment:
Q  236 gggtagcatttgggtgacatagagttg---------ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    |||||||||||||||||||||||||||         |||||||||| | ||||||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  13043605 gggtagcatttgggtgacatagagttgagtgatattggtgacattggctaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattgtga 13043506  T
Q  327 cattatgattgaccaat 343  Q
    ||||  |||||||||||    
T  13043505 catttcgattgaccaat 13043489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 24587558 - 24587488
Alignment:
Q  278 tcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcac 348  Q
    |||||||||||||||| |||||||| || ||||||||||| |||||||||||| |||||||||||||||||    
T  24587558 tcacaatgtcacaatgcttgtgaaaaagcgagaaacacaagcattgtgacattgtgattgaccaatgtcac 24587488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 24618737 - 24618677
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  24618737 tagcacttgggtgacatagagttgggtgacgttgaccaatcacaatgtcacaatgcttgtg 24618677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 31654304 - 31654367
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| |||||    
T  31654304 gggtagcacttgggtgatatagagttgggtgacattggccaatcacaatgtcacaatgcttgtg 31654367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 377
Target Start/End: Complemental strand, 10521905 - 10521847
Alignment:
Q  319 cattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatccg 377  Q
    |||||||||||| |||||| ||||||||||| |||||||||| ||||||||||||||||    
T  10521905 cattgtgacattgtgattggccaatgtcaccaaactctatgtcacccaagtgctatccg 10521847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 551227 - 551170
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtg 370  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||  |||||||||    
T  551227 cacaaacattgtggcattgtgattgaccaatgtcacccaactctatgccacccaagtg 551170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 16566462 - 16566385
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||  |||||||  ||||||| |||||||||| ||||| ||||    
T  16566462 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaactattcttaaagtatccgtagt 16566385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 13766746 - 13766781
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatca 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  13766746 ttgggtgacatagagttgggtgacattgaccaatca 13766781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 12343108 - 12343162
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||||||||||||   ||||||||||| ||||||| |||||    
T  12343108 ttgggtgacatagagttgggtgacattagtcaatcacaatgccacaatgcttgtg 12343162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 301
Target Start/End: Original strand, 7384515 - 7384552
Alignment:
Q  264 gtgacattgaccaatcacaatgtcacaatgtttgtgaa 301  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  7384515 gtgacattgaccaatcacaatgtcataatgtttgtgaa 7384552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 17684611 - 17684534
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||  |||||||  ||||||| |||||| ||| ||||| ||||    
T  17684611 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaactattctcaaagtatccgtagt 17684534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 17691582 - 17691505
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||||||| ||||| ||||    
T  17691582 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattcttaaagtatccgtagt 17691505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 10521976 - 10521925
Alignment:
Q  248 ggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||| |||||||||  |||||||||||||| |||| |||||    
T  10521976 ggtgacatagagttgagtgacattggtcaatcacaatgtcataatgcttgtg 10521925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 25537314 - 25537235
Alignment:
Q  37 gaataatttgttggtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaa 116  Q
    |||||||| ||  ||||||||||||||||||| | |||| || ||||||||  |||||||  ||||||| ||||||||||    
T  25537314 gaataattagtccgtttaatggaacattaagtataactttattgtgagaccccgttaaacataaggaaactattcttaaa 25537235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 189119 - 189053
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaa 116  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| ||||||||||    
T  189119 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattcttaaa 189053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 354
Target Start/End: Complemental strand, 2315366 - 2315325
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaact 354  Q
    |||||||||||||||||| ||||||| |||||||||| ||||    
T  2315366 cacaaacattgtgacattgtgattgatcaatgtcacccaact 2315325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 27381394 - 27381317
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  | ||||| |||||| ||| ||||||||||    
T  27381394 gtttaatggaacattaagtataacttaattgtgagaccccattaaacatatggaaactattctcaaagtatccatagt 27381317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 27471777 - 27471700
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  | ||||| |||||| ||| ||||||||||    
T  27471777 gtttaatggaacattaagtataacttaattgtgagaccccattaaacatatggaaactattctcaaagtatccatagt 27471700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 2315443 - 2315395
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaat 284  Q
    |||||||| ||| ||||||||||||| |||||||||||  |||||||||    
T  2315443 gggtagcacttgtgtgacatagagttaggtgacattgaataatcacaat 2315395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 15048155 - 15048203
Alignment:
Q  151 ataatagtaaagcatgaagactattatgt-taaagactgatcaccacat 198  Q
    |||||| |||||| ||||||||||||||| ||||||||||| |||||||    
T  15048155 ataataataaagcgtgaagactattatgtataaagactgatgaccacat 15048203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 7e-38; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 242 - 370
Target Start/End: Complemental strand, 2894096 - 2893968
Alignment:
Q  242 catttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgacca 341  Q
    |||||||||||||||||||||| ||||||||  |||||||| |||||||||| |||||||||||||||||| |||| |||||||| ||| |||||| |||    
T  2894096 catttgggtgacatagagttggatgacattggtcaatcacagtgtcacaatgcttgtgaaagagagagaaatacaagcattgtgagattgtgattggcca 2893997  T
Q  342 atgtcaccgaactctatgttacccaagtg 370  Q
    |||||||| |||||||||| |||||||||    
T  2893996 atgtcacccaactctatgtcacccaagtg 2893968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 245 - 349
Target Start/End: Complemental strand, 15011410 - 15011306
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatg 344  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||| |||||     
T  15011410 ttgggtgacatagagttgagtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaata 15011311  T
Q  345 tcacc 349  Q
    |||||    
T  15011310 tcacc 15011306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 263 - 369
Target Start/End: Original strand, 6217250 - 6217356
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgtta 362  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||||||||| |    
T  6217250 ggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgtca 6217349  T
Q  363 cccaagt 369  Q
    |||||||    
T  6217350 cccaagt 6217356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 2828703 - 2828586
Alignment:
Q  256 agagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactc 355  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||| |||| ||||||| |||||| ||||||||||| |||||    
T  2828703 agagttgggtgacattggccaatcacaatgtcacaatgcttctgaaagagagagaaacacaagcattttgacattgtgattggccaatgtcacccaactc 2828604  T
Q  356 tatgttacccaagtgcta 373  Q
    ||||| ||  ||||||||    
T  2828603 tatgtcacagaagtgcta 2828586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 349
Target Start/End: Original strand, 37762006 - 37762113
Alignment:
Q  242 catttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgacca 341  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| ||||| |||||||||||| |||||||||| |||||||| ||| |||||||||     
T  37762006 catttgggtgacgtagagttgagtgacattgaccaatcacaatgtcgcaatgcttgtgaaagagaaagaaacacaagcattgtgatattgtgattgaccc 37762105  T
Q  342 atgtcacc 349  Q
    ||||||||    
T  37762106 atgtcacc 37762113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 14229379 - 14229488
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgtta 362  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| ||||||||| | |||||||||| |    
T  14229379 ggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattg-ccaatgtcatccaactctatgtca 14229477  T
Q  363 cccaagtgcta 373  Q
    |||||||||||    
T  14229478 cccaagtgcta 14229488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 263 - 369
Target Start/End: Original strand, 29925596 - 29925702
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgtta 362  Q
    |||||||||| ||  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||||||||    
T  29925596 ggtgacattggcccctcacaatgtcagaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatgtta 29925695  T
Q  363 cccaagt 369  Q
    |||||||    
T  29925696 cccaagt 29925702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 233 - 369
Target Start/End: Complemental strand, 38933738 - 38933593
Alignment:
Q  233 cacgggtagcatttgggtgacatagagttgggtgacattga---------ccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattg 323  Q
    ||||||||||| ||||||||||||||||||||||||||||          ||||||| |||||||||||| ||||||||||||||||||||||| |||||    
T  38933738 cacgggtagcacttgggtgacatagagttgggtgacattggtgacgttggccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattg 38933639  T
Q  324 tgacattatgattgaccaatgtcaccgaactctatgttacccaagt 369  Q
    || |||| ||||||  |||||||||| |||||||||| ||| ||||    
T  38933638 tggcattgtgattggtcaatgtcacccaactctatgtcacctaagt 38933593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 369
Target Start/End: Complemental strand, 37961817 - 37961712
Alignment:
Q  264 gtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttac 363  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| || |||| |||| |  |||||||||| |||||||||  ||    
T  37961817 gtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattatggcattgtgatcggtcaatgtcacccaactctatgccac 37961718  T
Q  364 ccaagt 369  Q
    ||||||    
T  37961717 ccaagt 37961712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 236 - 349
Target Start/End: Complemental strand, 6722099 - 6721977
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacatt---------gaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    |||||||| ||||||||||||||||||| |||||||         | |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6722099 gggtagcacttgggtgacatagagttggttgacattagtgatattggccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattgtga 6722000  T
Q  327 cattatgattgaccaatgtcacc 349  Q
     ||| ||||||  ||||||||||    
T  6721999 tattgtgattggtcaatgtcacc 6721977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 14470618 - 14470692
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattg 337  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  14470618 ggtgacattgaccaatcacaatgttgcaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattg 14470692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 236 - 349
Target Start/End: Complemental strand, 16514572 - 16514450
Alignment:
Q  236 gggtagcatttgggtgacatagagttgg---------gtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    |||||||| |||||||||||||||||||         |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||     
T  16514572 gggtagcacttgggtgacatagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattatgg 16514473  T
Q  327 cattatgattgaccaatgtcacc 349  Q
    |||  |||||| |||||||||||    
T  16514472 catagtgattggccaatgtcacc 16514450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 216
Target Start/End: Complemental strand, 19692691 - 19692511
Alignment:
Q  37 gaataatttgttggtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagtaaaaaactt 136  Q
    |||||||| ||  |||||||||||||||||| ||||||||||| ||||| |   |||||| ||||||||||||||||||| ||||| |||| ||||  ||    
T  19692691 gaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctcattaaactaaaggaaattattcttaaagtatccttagtcaaaagttt 19692592  T
Q  137 tattatgaactaggataatagtaaagcatgaagactattatgtta-aagactgatcaccacatttcatgggtcatggatat 216  Q
    || |||||| |  ||||||| |||  ||| ||||||||||||| |  |||||| | ||||||| ||||||||||| |||||    
T  19692591 tactatgaaatgagataataataagacataaagactattatgtgagtagactgttgaccacatctcatgggtcatagatat 19692511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 29508716 - 29508803
Alignment:
Q  263 ggtgacattgaccaatcacaa-tgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| ||||| | |||| |||||| |||||||||||    
T  29508716 ggtgacattgaccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcacc 29508803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 6217354 - 6217300
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  6217354 ttgggtgacatagagttgggtgacattggccaatcacaatgccacaatgtttgtg 6217300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 235 - 337
Target Start/End: Complemental strand, 14892409 - 14892299
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgg---------gtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtg 325  Q
    |||||||||||||||||||||||||||||         |||||||||| |||||||||||| |||||  || ||||||||||||||| ||||||| ||||    
T  14892409 cgggtagcatttgggtgacatagagttggatgacattggtgacattgatcaatcacaatgttacaatacttatgaaagagagagaaagacaaaca-tgtg 14892311  T
Q  326 acattatgattg 337  Q
    ||||| ||||||    
T  14892310 acattgtgattg 14892299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 248 - 299
Target Start/End: Original strand, 38933598 - 38933649
Alignment:
Q  248 ggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  38933598 ggtgacatagagttgggtgacattgaccaatcacaatgccacaatgcttgtg 38933649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 236 - 298
Target Start/End: Original strand, 2893962 - 2894024
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgt 298  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  2893962 gggtaacacttgggtgacatagagttgggtgacattggccaatcacaatctcacaatgcttgt 2894024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 29925700 - 29925646
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  29925700 ttgggtaacatagagttgggtgacattggccaatcacaatgccacaatgtttgtg 29925646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 2828582 - 2828646
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||| ||  |||||||||||||||||||||||| ||||||||||||||| |||| |||||    
T  2828582 cgggtagcacttctgtgacatagagttgggtgacattggccaatcacaatgtcaaaatgcttgtg 2828646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 299
Target Start/End: Complemental strand, 14229491 - 14229429
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||| |||||    
T  14229491 gggtagcacttgggtgacatagagttggatgacattg-gcaatcacaatgtcacaatgcttgtg 14229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 37961714 - 37961768
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||| ||||||||||||||||||||||| ||||||||| || ||||||||||    
T  37961714 ttgggtggcatagagttgggtgacattgaccgatcacaatgccataatgtttgtg 37961768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 14464557 - 14464622
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaaga 304  Q
    ||||| ||| |||||||||||||| |||||||||  ||||||||||||||||||  ||||||||||    
T  14464557 tagcacttgtgtgacatagagttgagtgacattggtcaatcacaatgtcacaatacttgtgaaaga 14464622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 349
Target Start/End: Original strand, 9172989 - 9173093
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatg 344  Q
    ||||||||||||||||||||||||||||    |||| |||| || |||| || | ||||| ||||||| |||| ||||||| |||| |||||| |||||     
T  9172989 ttgggtgacatagagttgggtgacattggttcatcagaatgccataatgcttataaaagaaagagaaatacaagcattgtggcattgtgattggccaata 9173088  T
Q  345 tcacc 349  Q
    |||||    
T  9173089 tcacc 9173093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 376
Target Start/End: Complemental strand, 14464610 - 14464554
Alignment:
Q  320 attgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatcc 376  Q
    ||||||||||| |||||||||||||||||  |||||||||| || ||||||||||||    
T  14464610 attgtgacattgtgattgaccaatgtcactcaactctatgtcacacaagtgctatcc 14464554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 179
Target Start/End: Original strand, 18619870 - 18619996
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagtaaaaaactttattatgaactag 149  Q
    |||||||||| |||||||| |||||||||  ||||||| | |||||| |||||| |||||||||||| ||||  | ||   |||||||||| ||||   |    
T  18619870 gtttaatggagcattaagtgtgacttaattatgagaccca-ttaaacaaaaggatattattcttaaagtatctgtggt--caaactttattgtgaaaagg 18619966  T
Q  150 gataatagtaaagcatgaagactattatgt 179  Q
    ||||||| ||||||||  ||||||||||||    
T  18619967 gataatattaaagcatatagactattatgt 18619996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 24116020 - 24115950
Alignment:
Q  275 caatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgt 345  Q
    ||||||||||||| ||||| ||||||||||| | ||||||||  |||||| ||||| |||||| |||||||    
T  24116020 caatcacaatgtcgcaatgcttgtgaaagagtgtgaaacacaggcattgtaacattgtgattggccaatgt 24115950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 347
Target Start/End: Complemental strand, 8534285 - 8534174
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgac---attgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    ||||| |||||||| |||||||||| |||    ||||  |||| |||||||||||||  |||||||| ||||||||||||||| ||| | ||||| | ||    
T  8534285 tagcacttgggtgatatagagttggatgatgatattggtcaattacaatgtcacaattcttgtgaaatagagagaaacacaaatatttttacattgtaat 8534186  T
Q  336 tgaccaatgtca 347  Q
    ||| ||||||||    
T  8534185 tgatcaatgtca 8534174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 369
Target Start/End: Original strand, 15011356 - 15011412
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagt 369  Q
    ||||| |||||||||||| |||||| ||||||||||  |||||||||| ||||||||    
T  15011356 cacaagcattgtgacattgtgattggccaatgtcactcaactctatgtcacccaagt 15011412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 2144003 - 2143948
Alignment:
Q  244 tttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||| |||||||||||||| ||||| ||| ||||||||||||||| |||| |||||    
T  2144003 tttgtgtgacatagagttgagtgacgttggccaatcacaatgtcataatgcttgtg 2143948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 18796571 - 18796642
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatc 121  Q
    ||||||||||||||||||| | ||||||| ||||||||   || |||  ||||| |||||||||||||||||    
T  18796571 gtttaatggaacattaagtataacttaattgtgagacctcttttaacataaggatattattcttaaattatc 18796642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 42971630 - 42971576
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaa 291  Q
    |||||||| |||||||||||| | |||| |||||||||||||||||||| ||||||    
T  42971630 gggtagcacttgggtgacataaaattgg-tgacattgaccaatcacaatatcacaa 42971576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 367
Target Start/End: Original strand, 2894039 - 2894093
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaa 367  Q
    ||||| |||||||||| | |||||||||||||||| | |||||||||| ||||||    
T  2894039 cacaagcattgtgacactgtgattgaccaatgtcatccaactctatgtcacccaa 2894093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 4399183 - 4399134
Alignment:
Q  238 gtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtca 288  Q
    ||||||||||||||||||||| || | ||||||||| ||||||||||||||    
T  4399183 gtagcatttgggtgacatagaatt-gatgacattgatcaatcacaatgtca 4399134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 291
Target Start/End: Original strand, 7755333 - 7755390
Alignment:
Q  234 acgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaa 291  Q
    |||||||||| ||||||||||| | | | |||||||||| |||| |||||||||||||    
T  7755333 acgggtagcacttgggtgacattgtggttggtgacattggccaaccacaatgtcacaa 7755390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 21330390 - 21330313
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  21330390 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 21330313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 32545900 - 32545855
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagaga 308  Q
    |||||||||| ||||||| |||||||||||| || |||||||||||    
T  32545900 ggtgacattggccaatcataatgtcacaatgcttatgaaagagaga 32545855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 6721977 - 6722013
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||||||| |||||||| |||||    
T  6721977 ggtgacattgaccaatcacaatatcacaatgcttgtg 6722013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 349
Target Start/End: Complemental strand, 14229415 - 14229379
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  14229415 cacaagcattgtgacattgtgattgaccaatgtcacc 14229379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 32545898 - 32545938
Alignment:
Q  338 accaatgtcaccgaactctatgttacccaagtgctatccgt 378  Q
    |||||||||||  |||||||||| |||||||||||||||||    
T  32545898 accaatgtcactaaactctatgtcacccaagtgctatccgt 32545938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 38933697 - 38933737
Alignment:
Q  338 accaatgtcaccgaactctatgttacccaagtgctatccgt 378  Q
    |||||||||||| |||||||||| |||||||||||| ||||    
T  38933697 accaatgtcacccaactctatgtcacccaagtgctacccgt 38933737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 4e-36; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 236 - 349
Target Start/End: Original strand, 8243387 - 8243500
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgat 335  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||| |||| ||||    
T  8243387 gggtagcacttgggtgacatagagttgagtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgat 8243486  T
Q  336 tgaccaatgtcacc 349  Q
    ||||||| ||||||    
T  8243487 tgaccaacgtcacc 8243500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 263 - 348
Target Start/End: Complemental strand, 10086869 - 10086784
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcac 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  10086869 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattgaccaatgtcac 10086784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 226 - 330
Target Start/End: Original strand, 34541792 - 34541896
Alignment:
Q  226 tgtctttcacgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtg 325  Q
    |||||||| ||||||||| |||||||||||| ||||||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||| |||||||    
T  34541792 tgtctttctcgggtagcacttgggtgacataaagttgggtgacattggccaatcataatatcacaatgcttgtgaaagagagagaaacacaagcattgtg 34541891  T
Q  326 acatt 330  Q
     ||||    
T  34541892 gcatt 34541896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 35440995 - 35441081
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||    
T  35440995 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcacc 35441081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 263 - 369
Target Start/End: Complemental strand, 39851067 - 39850961
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgtta 362  Q
    |||||||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||||||| |||    
T  39851067 ggtgacattgaccaatcacaatattataatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcacccaactctatatta 39850968  T
Q  363 cccaagt 369  Q
    || ||||    
T  39850967 cctaagt 39850961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 349
Target Start/End: Complemental strand, 5033311 - 5033187
Alignment:
Q  234 acgggtagcatttgggtgacatagagttgggtgacattg---------accaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgt 324  Q
    |||||||||| ||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  5033311 acgggtagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgt 5033212  T
Q  325 gacattatgattgaccaatgtcacc 349  Q
    | |||| ||||||  ||||||||||    
T  5033211 ggcattgtgattggtcaatgtcacc 5033187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 237 - 348
Target Start/End: Complemental strand, 34229779 - 34229668
Alignment:
Q  237 ggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgatt 336  Q
    ||||||| ||| ||||||||||||| ||||||||||  |||||||||| |||||||| ||||||||||||||||||||||| |||| ||||||| |||||    
T  34229779 ggtagcacttgtgtgacatagagttaggtgacattggtcaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattctgacattgtgatt 34229680  T
Q  337 gaccaatgtcac 348  Q
    |||  |||||||    
T  34229679 gactcatgtcac 34229668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 263 - 348
Target Start/End: Complemental strand, 8796534 - 8796449
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcac 348  Q
    |||||||||||||||||| |||||||||||| |||||||||| |||||||||||| |||||||||||| |||||||||||| ||||    
T  8796534 ggtgacattgaccaatcaaaatgtcacaatgcttgtgaaagatagagaaacacaagcattgtgacattgtgattgaccaatatcac 8796449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 349
Target Start/End: Original strand, 33841580 - 33841703
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgggtg---------acattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtg 325  Q
    ||||||||| ||||||||||||||||||||||         |||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  33841580 cgggtagcacttgggtgacatagagttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtgaaagagagagaaacacaagcattgtg 33841679  T
Q  326 acattatgattgaccaatgtcacc 349  Q
     |||| ||||||  ||||||||||    
T  33841680 gcattctgattggtcaatgtcacc 33841703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 5667209 - 5667123
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||| ||||| ||||||||| |||| |||||||||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  5667209 ggtgacattggccaattacaatgtcataatgcttgtgaaagagagagaaatacaagcattgtgacattgtgattgaccaatgtcacc 5667123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 4958709 - 4958627
Alignment:
Q  264 gtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtca 347  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  4958709 gtgacattgaccaatcacaa-gtcacaatacttgtgaaagagagagaaacacaaacattatgacattgtgattggccaatgtca 4958627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 282 - 378
Target Start/End: Complemental strand, 6296698 - 6296602
Alignment:
Q  282 aatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctatccgt 378  Q
    |||||||||||  ||||||||||||||||||||||| |||| ||||||| ||||||  |||||||||| |||||||||| | |||||||||| ||||    
T  6296698 aatgtcacaatacttgtgaaagagagagaaacacaagcattatgacattgtgattggtcaatgtcacccaactctatgtcatccaagtgctacccgt 6296602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 263 - 349
Target Start/End: Original strand, 45191153 - 45191239
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||||  |||||||||| ||||||| || ||||||||||||||||||||||||||| ||||| ||||||  ||||||||||    
T  45191153 ggtgacattgattaatcacaatgccacaatgcttatgaaagagagagaaacacaaacattgtaacattttgattggtcaatgtcacc 45191239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 6296602 - 6296667
Alignment:
Q  234 acgggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  6296602 acgggtagcacttggatgacatagagttgggtgacattgaccaatcacaatgtcataatgcttgtg 6296667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 24797491 - 24797349
Alignment:
Q  90 gttaaaccaaaggaaattattcttaaattatccatagtaaaaaactttattatgaactaggataatagtaaagcatgaagactattatgtta-aagactg 188  Q
    ||||||| ||| || ||||||||||||  | ||||||| |||| ||||| ||||||||  ||||||||||| ||||  |||||||||||| |  | | ||    
T  24797491 gttaaactaaatgacattattcttaaagaacccatagtcaaaagctttactatgaactgagataatagtaaggcatagagactattatgtgagtatattg 24797392  T
Q  189 atcaccacatttcatgggtcatggatatgggatatcatgtctt 231  Q
    || || |||| ||||||||||||||||| ||||||||||||||    
T  24797391 atgactacatctcatgggtcatggatataggatatcatgtctt 24797349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 326
Target Start/End: Complemental strand, 31159963 - 31159900
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtga 326  Q
    |||||||||  ||||||| |||||||||||| |||||||||||||||||||| ||| |||||||    
T  31159963 ggtgacattcgccaatcataatgtcacaatgcttgtgaaagagagagaaacaaaaatattgtga 31159900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 35031640 - 35031689
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaa 312  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  35031640 ggtgacattgatcaatcacaatgtcgcaatgcttgtgaaagagagagaaa 35031689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 373
Target Start/End: Original strand, 37618736 - 37618860
Alignment:
Q  245 ttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatg 344  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||  |||| | |||||||||||  | |   |||| ||||| || || |||||||    
T  37618736 ttgggtgacatagaattgg-tgacattggccaatcacaatgtcacaatccttgtaagagagagagaaaagcca--cttgtaacattgtgtttcaccaatg 37618832  T
Q  345 tcaccgaactctatgttacccaagtgcta 373  Q
    ||||| || ||||||| ||||||||||||    
T  37618833 tcacc-aattctatgtcacccaagtgcta 37618860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 39850972 - 39851017
Alignment:
Q  254 atagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||    
T  39850972 atagagttgggtgacattggccaatcacaatgccacaatgtttgtg 39851017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 34229717 - 34229777
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||| |||||||| ||| |||||||||||||||||| |||||||||| || |||||||||    
T  34229717 cacaagcattgtgatattgtgattgaccaatgtcacctaactctatgtcacacaagtgcta 34229777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 34541865 - 34541805
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||| |||||||| |||||||||| ||||||||||| |||| ||||| ||||||||||||    
T  34541865 cacaagcattgtgatattatgattggccaatgtcacccaactttatgtcacccaagtgcta 34541805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 39139899 - 39139844
Alignment:
Q  237 ggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaat 292  Q
    |||||||||||||||||||||  || ||||||||||  ||||||||||||||||||    
T  39139899 ggtagcatttgggtgacatagtatttggtgacattggtcaatcacaatgtcacaat 39139844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 24642714 - 24642780
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaa 116  Q
    ||||||||||||||||||| | ||||||| ||||||||  |||||||  ||||||| ||||||||||    
T  24642714 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaactattcttaaa 24642780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 24636920 - 24636985
Alignment:
Q  51 tttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaa 116  Q
    |||||||||||||||||| | ||||||| ||||||||  |||||||  ||||||| ||||||||||    
T  24636920 tttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaactattcttaaa 24636985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 8243450 - 8243390
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||| ||||||| |||| ||||||| |||||||||  |||||||||| ||||||||||||    
T  8243450 cacaagcattgtggcattgtgattgatcaatgtcactcaactctatgtcacccaagtgcta 8243390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 36766175 - 36766235
Alignment:
Q  248 ggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagaga 308  Q
    |||||||||||||||||||||||||  | ||||||| |||| |||| || |||||||||||    
T  36766175 ggtgacatagagttgggtgacattggtcgatcacaacgtcataatgcttatgaaagagaga 36766235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 307
Target Start/End: Complemental strand, 1880376 - 1880306
Alignment:
Q  236 gggtagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagag 307  Q
    |||||||| |||||||||||||| |||| ||||||||  |||||||||||||||| |  || ||||||||||    
T  1880376 gggtagcacttgggtgacatagaattgg-tgacattggtcaatcacaatgtcacagtccttatgaaagagag 1880306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 373
Target Start/End: Original strand, 1880323 - 1880373
Alignment:
Q  322 tgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||||||| |||||||||||||||||| || ||||||| ||||||||||||    
T  1880323 tgtgacattgtgattgaccaatgtcacc-aattctatgtcacccaagtgcta 1880373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 6094188 - 6094259
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatc 121  Q
    ||||||||||||||||||| | ||||||| ||||||||  |||||||  ||||||| |||| ||||| ||||    
T  6094188 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaactatttttaaagtatc 6094259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 8371574 - 8371491
Alignment:
Q  148 aggataatagtaaagcatgaagactattatgt-taaagactgatcaccacatttcatgggtcatggatatgggatatcatgtct 230  Q
    ||||||||| ||||||||  |||||||||||| |  |||||||| ||| ||| ||||||||||| |||||| ||||||| ||||    
T  8371574 aggataataataaagcatcgagactattatgtatgtagactgatgaccgcatctcatgggtcatagatatgagatatcaagtct 8371491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 349
Target Start/End: Original strand, 43844534 - 43844581
Alignment:
Q  302 agagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||||||||| |||||||||||| ||||||| |||| |||||    
T  43844534 agagagagaaacacaagcattgtgacattgtgattgatcaatatcacc 43844581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 380
Target Start/End: Original strand, 5033271 - 5033313
Alignment:
Q  338 accaatgtcaccgaactctatgttacccaagtgctatccgtct 380  Q
    |||||||||||| |||||||||| |||||||||||| ||||||    
T  5033271 accaatgtcacccaactctatgtcacccaagtgctacccgtct 5033313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 272
Target Start/End: Original strand, 5667086 - 5667123
Alignment:
Q  235 cgggtagcatttgggtgacatagagttgggtgacattg 272  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  5667086 cgggtagcacttgggtgacatagagttggatgacattg 5667123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 10920248 - 10920297
Alignment:
Q  37 gaataatttgttggtttaatggaacattaagtctgacttaatcgtgagac 86  Q
    |||||||| ||  ||||||||||||||||||| ||| |||||||||||||    
T  10920248 gaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 18835334 - 18835407
Alignment:
Q  151 ataatagtaaagcatgaagactattatgt-taaagactgatcaccacatttcatgggtcatggatatgggatat 223  Q
    |||||| ||||||||  |||||||||||| |  |||||||| ||||||| ||||||||||| |||||| |||||    
T  18835334 ataataataaagcatcgagactattatgtatgtagactgattaccacatctcatgggtcatagatatgagatat 18835407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 21940730 - 21940807
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  21940730 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 21940807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 39139844 - 39139897
Alignment:
Q  320 attgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgcta 373  Q
    ||||||||||| |||||||||||||||||| ||  |||||| |||||| |||||    
T  39139844 attgtgacattgtgattgaccaatgtcaccaaatactatgtcacccaaatgcta 39139897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 5033187 - 5033223
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  5033187 ggtgacattgaccaatcacaatgccacaatgcttgtg 5033223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 45191239 - 45191203
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  45191239 ggtgacattgaccaatcaaaatgttacaatgtttgtg 45191203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 247 - 324
Target Start/End: Original strand, 2897 - 2974
Alignment:
Q  247 gggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgt 324  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2897 gggtgacatagagttgggtgatattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgt 2974  T

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Target: scaffold0481; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 2949 - 2892
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtg 370  Q
    |||||||||||||||||| ||||||  |||| ||||| |||||||||| |||| ||||    
T  2949 cacaaacattgtgacattgtgattggtcaatatcacccaactctatgtcaccccagtg 2892  T

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Target: scaffold0016 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 233 - 369
Target Start/End: Original strand, 49690 - 49835
Alignment:
Q  233 cacgggtagcatttgggtgacatagagttgggtgac---------attgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattg 323  Q
    ||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  49690 cacgggtagcacttgggtgacatagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtgaaagaaagagaaacacaagcattg 49789  T
Q  324 tgacattatgattgaccaatgtcaccgaactctatgttacccaagt 369  Q
    || |||| |||||| ||||||||||| |||||||||| ||| ||||    
T  49790 tggcattgtgattggccaatgtcacctaactctatgtcaccgaagt 49835  T

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Target: scaffold0016; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 49830 - 49779
Alignment:
Q  248 ggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||| |||||    
T  49830 ggtgacatagagttaggtgacattggccaatcacaatgccacaatgcttgtg 49779  T

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Target: scaffold0586 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 7084 - 7159
Alignment:
Q  274 ccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  7084 ccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcacc 7159  T

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Target: scaffold0586; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 7159 - 7123
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtg 299  Q
    |||||||||| |||||||||||||||||||| |||||    
T  7159 ggtgacattggccaatcacaatgtcacaatgcttgtg 7123  T

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Target: scaffold1033 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 2349 - 2265
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattg 323  Q
    ||||| ||| |||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  2349 tagcacttgtgtgacatagaattgggcgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 2265  T

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Target: scaffold1033; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 2289 - 2350
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctat 374  Q
    ||||| |||||||||||| ||||||| ||||||| || || ||||||| || ||||||||||    
T  2289 cacaagcattgtgacattgtgattgatcaatgtcgcccaattctatgtcacacaagtgctat 2350  T

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Target: scaffold1029 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 2349 - 2265
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattg 323  Q
    ||||| ||| |||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  2349 tagcacttgtgtgacatagaattgggcgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 2265  T

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Target: scaffold1029; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 2289 - 2350
Alignment:
Q  313 cacaaacattgtgacattatgattgaccaatgtcaccgaactctatgttacccaagtgctat 374  Q
    ||||| |||||||||||| ||||||| ||||||| || || ||||||| || ||||||||||    
T  2289 cacaagcattgtgacattgtgattgatcaatgtcgcccaattctatgtcacacaagtgctat 2350  T

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Target: scaffold0161 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 27247 - 27332
Alignment:
Q  264 gtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattgtgacattatgattgaccaatgtcacc 349  Q
    |||| |||| ||||||||||||||| |||  |||||||||||||||||||| || ||||||| |||| |||||| ||||| |||||    
T  27247 gtgatattggccaatcacaatgtcataattcttgtgaaagagagagaaacagaagcattgtggcattgtgattggccaatatcacc 27332  T

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Target: scaffold0180 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 19115 - 19207
Alignment:
Q  239 tagcatttgggtgacatagagttgggtgacattgac---------caatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacatt 322  Q
    ||||||||| |||||||||||||||||||||||||          ||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  19115 tagcatttgtgtgacatagagttgggtgacattgatgatattgatcaatcacaatgtcacaatgcttgtggaagaaagagaaacacaaacatt 19207  T

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Target: scaffold0063 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 5594 - 5660
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaa 116  Q
    ||||||||||||||||||| | ||||||| ||||||||  |||||||  ||||||||||||||||||    
T  5594 gtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaaattattcttaaa 5660  T

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Target: scaffold0536 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 4918 - 4969
Alignment:
Q  263 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaaca 314  Q
    |||||||| ||||||||||||| | |||||| |||||||||||||| |||||    
T  4918 ggtgacatcgaccaatcacaatattacaatgcttgtgaaagagagacaaaca 4969  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 67709 - 67619
Alignment:
Q  134 ctttattatgaactaggataatagtaaagcatgaagactattatgt-taaagactgatcaccacatttcatgggtcatggatatgggatat 223  Q
    ||||| |||||| |||||||||| |||||| |  |||||||||||| || |||||||| ||| ||| |||||||| || |||||| |||||    
T  67709 ctttaatatgaattaggataataataaagcgtcgagactattatgtatatagactgatgaccgcatctcatgggttatagatatgagatat 67619  T

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Target: scaffold0234 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 2463 - 2386
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  2463 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 2386  T

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Target: scaffold0234; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 11354 - 11277
Alignment:
Q  50 gtttaatggaacattaagtctgacttaatcgtgagaccgagttaaaccaaaggaaattattcttaaattatccatagt 127  Q
    ||||||||||||||||||| | ||||||| ||||||||   ||||||  ||||||| |||||| ||| ||||| ||||    
T  11354 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagt 11277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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