View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1379_low_37 (Length: 390)

Name: NF1379_low_37
Description: NF1379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1379_low_37
NF1379_low_37
[»] chr3 (17 HSPs)
chr3 (33-298)||(6478886-6479151)
chr3 (29-381)||(6948125-6948484)
chr3 (29-380)||(6553258-6553611)
chr3 (29-298)||(8590585-8590854)
chr3 (29-298)||(8455510-8455779)
chr3 (29-300)||(6736846-6737117)
chr3 (29-300)||(6519064-6519335)
chr3 (32-152)||(5299587-5299707)
chr3 (32-159)||(5281510-5281637)
chr3 (68-152)||(5251061-5251145)
chr3 (68-152)||(5268948-5269032)
chr3 (29-95)||(8479979-8480045)
chr3 (68-152)||(4387996-4388080)
chr3 (183-242)||(8479867-8479926)
chr3 (339-381)||(8590885-8590927)
chr3 (346-383)||(6478807-6478844)
chr3 (341-374)||(8455813-8455846)
[»] scaffold0425 (1 HSPs)
scaffold0425 (29-381)||(6296-6650)
[»] chr4 (2 HSPs)
chr4 (47-163)||(41068368-41068482)
chr4 (261-311)||(41068269-41068320)
[»] chr5 (1 HSPs)
chr5 (29-76)||(19936185-19936232)


Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 33 - 298
Target Start/End: Complemental strand, 6479151 - 6478886
Alignment:
Q  33 atctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgcttctt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  6479151 atctcatctaatagttggtctgcttcataaacaacatgtttaagtttatcaagccacttcttcacatatatgatttggtactgctttatctctgcttctt 6479052  T
Q  133 ccagcacatggttgatagaactaagtgcaatattaagttctttcacaaggtcatcgacattataactactgaagtagtttctgatatgaaccgaagccaa 232  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||| | |||||||||||||| ||| |||| ||||||||||||    
T  6479051 ccagcacatggttgatagaattgagtgcaatattaagttctttcacaaggtcatcaacatttttactactgaagtagtctctaatatcaaccgaagccaa 6478952  T
Q  233 cttctcaattatcacttgaaaggatgactgaagaaatgccccagctaccaattctgccatgatata 298  Q
    ||||||||  ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  6478951 cttctcaaaaatcacttgaaaagaagactgaagaaatgccccagctaccaactctgccatgatata 6478886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 29 - 381
Target Start/End: Original strand, 6948125 - 6948484
Alignment:
Q  29 agaaatctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacat------atatgctttcgtactgctttatc 122  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||      || |  ||| |||||||||||||    
T  6948125 agaaatctcatctaacagttggtctgcctcatagacaacatgtttaagttcatcaagccacttcttcacattcacatatttcttttggtactgctttatc 6948224  T
Q  123 tctgcttcttccagcacatggttgatagaactaagtgcaatattaagttctttcacaaggtcatcgacattataactactgaagtagtttctgatatgaa 222  Q
    |||||||| ||||| ||  ||||||||||   |||||||  || ||||||||||||||||||||| ||||| | |||||| ||||||| |||||||  ||    
T  6948225 tctgcttcgtccagtactaggttgatagagtcaagtgcagaatgaagttctttcacaaggtcatcaacattgttactactaaagtagtctctgataccaa 6948324  T
Q  223 ccgaagccaacttctcaattatcacttgaaaggatgactgaagaaatgccccagctaccaattctgccatgatatatt-agcctgaagcacaagtcttga 321  Q
    | ||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |    
T  6948325 cagaagccaacttctcaataatcacttgaaaagaagactgaagaaatgccccagctaccaactctgccatgatatattgagcctgaagcacaagtcttaa 6948424  T
Q  322 aacctctgcaaggtaattgtgttctttcagtcaagtaaaattaaatgaaacaagaattat 381  Q
    | |||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  6948425 agcctctgcaagataaatgtgttctttctgtcaagtaaaattaaatgaaacaagaattat 6948484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 29 - 380
Target Start/End: Complemental strand, 6553611 - 6553258
Alignment:
Q  29 agaaatctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgct 128  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  6553611 agaaatctcatctaatagttggtctgcctcataaacaacatgtttaagttcatcaagccacttcttcacatatttgttttggtactgctttatctctgct 6553512  T
Q  129 tcttccagcacatggttgatagaactaagtgcaatattaagttctttcacaaggtcatcgacattataactactgaagtagtttctgatatgaaccgaag 228  Q
    || || || || ||||||||||||  ||||||||||||||||||||||||||| ||||| ||||| | |||||| ||||||| |||||||  ||| ||||    
T  6553511 tcgtctagtacttggttgatagaatcaagtgcaatattaagttctttcacaagttcatcaacattgttactactaaagtagtctctgataccaacggaag 6553412  T
Q  229 ccaacttctcaattatcacttgaaaggatgactgaagaaatgccccagctaccaattctgccatgatatatt-agcctgaagcacaagtcttgaaacctc 327  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| || ||||| ||||||||||||| || ||||    
T  6553411 ccaacttctcaataatcacttgaaaggaagactgaagaaatgccccggctaccaactctgccatgatatgttgagcctaaagcacaagtcttaaagcctc 6553312  T
Q  328 tgcaag--gtaattgtgttctttcagtcaagtaaaattaaatgaaacaagaatta 380  Q
    ||||||  | || |||||||||||  |||| ||||| | |||||||||| |||||    
T  6553311 tgcaagatggaaatgtgttctttctatcaaataaaa-tgaatgaaacaataatta 6553258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 29 - 298
Target Start/End: Original strand, 8590585 - 8590854
Alignment:
Q  29 agaaatctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgct 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  8590585 agaaatctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacatatttgcttcggtactgctttatctctgct 8590684  T
Q  129 tcttccagcacatggttgatagaactaagtgcaatattaagttctttcacaaggtcatcgacattataactactgaagtagtttctgatatgaaccgaag 228  Q
    || ||||| || | ||||||||||  |||||||||||| |||||||||||||||||||| ||||||| || || ||| |||| |||||||| ||||||||    
T  8590685 tcgtccagtacttcgttgatagaatcaagtgcaatattgagttctttcacaaggtcatcaacattattacgaccgaattagtctctgatatcaaccgaag 8590784  T
Q  229 ccaacttctcaattatcacttgaaaggatgactgaagaaatgccccagctaccaattctgccatgatata 298  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  8590785 ccaacttctcaataatcacttgaaaggaagactgaagaaatgccccagctaccaactctgccatgatata 8590854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 29 - 298
Target Start/End: Original strand, 8455510 - 8455779
Alignment:
Q  29 agaaatctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgct 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  8455510 agaaatctcatctaatagttggtctgcttcataaacaacatgtttaagatcatcaagccacttcttcacatatttgttttggtactgctttatctctgct 8455609  T
Q  129 tcttccagcacatggttgatagaactaagtgcaatattaagttctttcacaaggtcatcgacattataactactgaagtagtttctgatatgaaccgaag 228  Q
    || || || || ||||||||||||  |||||||||||||||||||||| ||||| |||| ||||| | |||||||||||||| ||| |||| ||||||||    
T  8455610 tcgtctagtacttggttgatagaatcaagtgcaatattaagttctttcgcaagggcatcaacattgttactactgaagtagtctctaatatcaaccgaag 8455709  T
Q  229 ccaacttctcaattatcacttgaaaggatgactgaagaaatgccccagctaccaattctgccatgatata 298  Q
    | |||||||| || |||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  8455710 ctaacttctcgataatcaattgaaaggaagactgaagaaatgccccagctaccaactctgccatgatata 8455779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 29 - 300
Target Start/End: Original strand, 6736846 - 6737117
Alignment:
Q  29 agaaatctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgct 128  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  6736846 agaaatctcatccaatagttggtctgcttcataaagaacatgtttaagttcatcaagccacttcttcacatatttgttttggtactgctttatctctgct 6736945  T
Q  129 tcttccagcacatggttgatagaactaagtgcaatattaagttctttcacaaggtcatcgacattataactactgaagtagtttctgatatgaaccgaag 228  Q
    || || || || ||||||||||||  ||||||| |||||||||||||| ||||  |||| ||||| | |||||||||||||| ||| |||| ||| ||||    
T  6736946 tcgtctagtacttggttgatagaatcaagtgcattattaagttctttcgcaagagcatcaacattgttactactgaagtagtctctaatatcaactgaag 6737045  T
Q  229 ccaacttctcaattatcacttgaaaggatgactgaagaaatgccccagctaccaattctgccatgatatatt 300  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  6737046 ccaacttctcaataatcacttgaaaggaagactgaagaaatgccccagctaccaactctgccatgatatatt 6737117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 29 - 300
Target Start/End: Complemental strand, 6519335 - 6519064
Alignment:
Q  29 agaaatctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgct 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||| | |||||||    
T  6519335 agaaatctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacatatttgttttggtactgcttcagctctgct 6519236  T
Q  129 tcttccagcacatggttgatagaactaagtgcaatattaagttctttcacaaggtcatcgacattataactactgaagtagtttctgatatgaaccgaag 228  Q
    ||||| |||||||||||||||||| | |||  |  || |||||||||| ||||| |||| ||||| | |||||||||||||| ||| |||||||| || |    
T  6519235 tcttcaagcacatggttgatagaattgagtttatgatcaagttctttcgcaagggcatcaacattgtcactactgaagtagtctctaatatgaacagacg 6519136  T
Q  229 ccaacttctcaattatcacttgaaaggatgactgaagaaatgccccagctaccaattctgccatgatatatt 300  Q
    ||||||||||||  |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  6519135 ccaacttctcaaaaatcacttgaaaggaagactgaagaaatgccccagctaccaactctgccatgatatatt 6519064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 32 - 152
Target Start/End: Original strand, 5299587 - 5299707
Alignment:
Q  32 aatctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgcttct 131  Q
    ||||||||| || ||||| ||||||||||| |||||||||||||| ||| |||||||||||||||| |||  ||||| ||| |||||| |||| ||||||    
T  5299587 aatctcatccaaaagttgatctgcttcatacacaacatgtttaagatcaccaagccacttcttcacgtatgagctttggtattgctttgtctccgcttct 5299686  T
Q  132 tccagcacatggttgatagaa 152  Q
    || || |||||||||||||||    
T  5299687 tcgagtacatggttgatagaa 5299707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 159
Target Start/End: Original strand, 5281510 - 5281637
Alignment:
Q  32 aatctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgcttct 131  Q
    ||||||||| || | ||||||||| ||||| ||| |||||||||| ||||||||||||||||| |||||| |||||| ||||||| ||   |||||||||    
T  5281510 aatctcatcgaaaatttggtctgcctcatatacagcatgtttaagatcatcaagccacttctttacatatgtgcttttgtactgcatttgttctgcttct 5281609  T
Q  132 tccagcacatggttgatagaactaagtg 159  Q
    |||||||| || || |||||| ||||||    
T  5281610 tccagcacttgatttatagaattaagtg 5281637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 5251061 - 5251145
Alignment:
Q  68 atgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgcttcttccagcacatggttgatagaa 152  Q
    ||||||||| |||||||||||||||||||| || ||||||| ||| ||||| ||||| |||||||||| ||||||||||||||||    
T  5251061 atgtttaagatcatcaagccacttcttcacgtacatgctttggtattgcttcatctccgcttcttccaacacatggttgatagaa 5251145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 5268948 - 5269032
Alignment:
Q  68 atgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgcttcttccagcacatggttgatagaa 152  Q
    ||||||||| |||||||||||||||||||| || ||||||| | ||||||| ||||| |||||||||| ||||||||||||||||    
T  5268948 atgtttaagatcatcaagccacttcttcacgtacatgctttggaactgcttcatctcagcttcttccaacacatggttgatagaa 5269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 8480045 - 8479979
Alignment:
Q  29 agaaatctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttc 95  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||    
T  8480045 agaaatctcatgtaatagttggtttgcttcataaacaacatgtttaagttcatcaagtcaattcttc 8479979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 4388080 - 4387996
Alignment:
Q  68 atgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgcttcttccagcacatggttgatagaa 152  Q
    ||||||||| ||||||||||||||||||||  | ||||||| ||||||||| ||||| |||||||||| |||| |||||||||||    
T  4388080 atgtttaagatcatcaagccacttcttcacggacatgctttggtactgcttcatctccgcttcttccaacacacggttgatagaa 4387996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 8479926 - 8479867
Alignment:
Q  183 tcatcgacattataactactgaagtagtttctgatatgaaccgaagccaacttctcaatt 242  Q
    ||||| ||||||| | |||||||||||| ||| |||| ||||||||||||||||||||||    
T  8479926 tcatccacattattattactgaagtagtctctaatatcaaccgaagccaacttctcaatt 8479867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 8590885 - 8590927
Alignment:
Q  339 tgtgttctttcagtcaagtaaaattaaatgaaacaagaattat 381  Q
    ||| ||||||| ||||| |||||||||||||||||||||||||    
T  8590885 tgtattctttctgtcaaataaaattaaatgaaacaagaattat 8590927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 383
Target Start/End: Complemental strand, 6478844 - 6478807
Alignment:
Q  346 tttcagtcaagtaaaattaaatgaaacaagaattatct 383  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  6478844 tttctgtcaattaaaattaaatgaaacaagaattatct 6478807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 374
Target Start/End: Original strand, 8455813 - 8455846
Alignment:
Q  341 tgttctttcagtcaagtaaaattaaatgaaacaa 374  Q
    ||||||||| ||||||||||||||||||||||||    
T  8455813 tgttctttctgtcaagtaaaattaaatgaaacaa 8455846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 29 - 381
Target Start/End: Complemental strand, 6650 - 6296
Alignment:
Q  29 agaaatctcatctaatagttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgct 128  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  6650 agaaatctcatctaatagttggtctgcctcataaacaacatgtttaagttcatcaagccacttcttcacatatttgttttggtactgctttatctctgct 6551  T
Q  129 tcttccagcacatggttgatagaactaagtgcaatattaagttctttcacaaggtcatcgacattataactactgaagtagtttctgatatgaaccgaag 228  Q
    || || || || ||||||||||||  ||||||||||||||||||||||||||| ||||| ||||| | |||||| ||||||| |||||||  ||| ||||    
T  6550 tcgtctagtacttggttgatagaatcaagtgcaatattaagttctttcacaagttcatcaacattgttactactaaagtagtctctgataccaacggaag 6451  T
Q  229 ccaacttctcaattatcacttgaaaggatgactgaagaaatgccccagctaccaattctgccatgatatatt-agcctgaagcacaagtcttgaaacctc 327  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| || ||||| ||||||||||||| || ||||    
T  6450 ccaacttctcaataatcacttgaaaggaagactgaagaaatgccccggctaccaactctgccatgatatgttgagcctaaagcacaagtcttaaagcctc 6351  T
Q  328 tgcaag--gtaattgtgttctttcagtcaagtaaaattaaatgaaacaagaattat 381  Q
    ||||||  | || |||||||||||  |||| ||||| | |||||||||| ||||||    
T  6350 tgcaagatggaaatgtgttctttctatcaaataaaa-tgaatgaaacaataattat 6296  T

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Target: chr4 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 47 - 163
Target Start/End: Complemental strand, 41068482 - 41068368
Alignment:
Q  47 ttggtctgcttcataaacaacatgtttaagttcatcaagccacttcttcacatatatgctttcgtactgctttatctctgcttcttccagcacatggttg 146  Q
    |||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| | || |||||||||||||| ||||||||||    
T  41068482 ttggtctgcttca--aacaacatgtttaagttcatcaagccaattcttcacatatatgctttggtactgttatagctctgcttcttccaacacatggttg 41068385  T
Q  147 atagaactaagtgcaat 163  Q
    |||||| | ||||||||    
T  41068384 atagaattgagtgcaat 41068368  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 311
Target Start/End: Complemental strand, 41068320 - 41068269
Alignment:
Q  261 tgaagaaatgccccagctaccaattctgccatgatatatt-agcctgaagca 311  Q
    ||||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  41068320 tgaagaaatgccccagctaccaactctgccatgatacattgagcctgaagca 41068269  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 19936185 - 19936232
Alignment:
Q  29 agaaatctcatctaatagttggtctgcttcataaacaacatgtttaag 76  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  19936185 agaaatctcatgtaatagttggtttgcttcataaacaacatgtttaag 19936232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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