View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13802_low_44 (Length: 206)
Name: NF13802_low_44
Description: NF13802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13802_low_44 |
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Alignment Details
Target: chr7 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 27940319 - 27940477
Alignment:
| Q |
17 |
gatgaatctaaaaaacgtagagaacgaaactaaaacccaaatcataacttgaatctgaatccaattgaaggttgaagggaagttggagaacgtcgtacct |
116 |
Q |
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| T |
27940319 |
gatgaatctaaaaaacatagagaacgaaactaaaacccagatcataacttgaatctgaatacaattgaaggttgaagggaagttggagaacgtctaacct |
27940418 |
T |
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| Q |
117 |
caagacaacacaacaaaaactagaaacacaatagaatgaaaatacaaaaccacaaggag |
175 |
Q |
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||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
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| T |
27940419 |
caagacaacacaacaaaaatcggaaacataatagaatgaaaatacaaaaccacaaggag |
27940477 |
T |
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