View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13802_low_45 (Length: 203)
Name: NF13802_low_45
Description: NF13802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13802_low_45 |
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Alignment Details
Target: chr3 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 44066832 - 44066903
Alignment:
| Q |
1 |
caaaatagttgattattaaaacaataacaattaacaacatggaatagagataaagagagctaaatggttttg |
72 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44066832 |
caaaatagttgattattaaaacaataacaattaacaacatggaatagagataaagagagctaaatggttttg |
44066903 |
T |
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Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 44066965 - 44067010
Alignment:
| Q |
134 |
caattcaatgaagaaacaatggtgtgagattgaggcaataggcatc |
179 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44066965 |
caattcaatgaagaaacaatggtgtgagattgaggcaataggcatc |
44067010 |
T |
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