View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13802_low_8 (Length: 534)
Name: NF13802_low_8
Description: NF13802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13802_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 452; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 10 - 517
Target Start/End: Complemental strand, 10311826 - 10311319
Alignment:
| Q |
10 |
attatacttagactcaatagctaaatgatttctctgatgctgtctaaaattatgtgttgggatacctaaagccacattcaagttcttattattcctaaca |
109 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
10311826 |
attatacttagactcaatagctaattgatttctctgatgctgtctaaaattatgtggagggatacctaaagccacattcaagttcttattattcctaaca |
10311727 |
T |
|
| Q |
110 |
tgtaacttttcaacaatgtgtttaggatctgtggtggaacaaaaactagtactaggaggtccagatccagctaaggaagcaaaatttctagttaaaatat |
209 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10311726 |
tgtaatttttcaacaatgtgtttaggatctgtggtggaacaaaaactagtactaggaggtccagatccagctaaggaagcaaaatttctagttaaaatat |
10311627 |
T |
|
| Q |
210 |
tattctcattaccaatcacattttccttcctaatatttgtgcataatctaggtgaccttggtaaagggtcattgattttcctcttatgctcttcagttcc |
309 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10311626 |
tattctcattaccaatcacattttccttcctaataggtgtgcataatctaggtgaccttggtaaagggtcattgattttcctcttatgctcttcagttcc |
10311527 |
T |
|
| Q |
310 |
tctcccactatttgcagtcatgtcttataagtaaccaattcatgcagttccttcaatcaaatttagatcaatatataagtttattttacaacatatattg |
409 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10311526 |
tctcccactatttgcagtcatgtcttataaataaccaattcatgcagttccttcaatcaaatttagatcaatatataagtttattttacaacatatattg |
10311427 |
T |
|
| Q |
410 |
tgaatatgactgaaaatcaacaaccaactnnnnnnnntatatatataccttcaaatgattgcatgaacatagatgtatagaatatattttctttataaca |
509 |
Q |
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||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10311426 |
tgaatatgactgaaaatcaacaagcaactaaaaaaaatatatatataccttcaaatgattgcatgaacatagatgtatagaatatattttctttataaca |
10311327 |
T |
|
| Q |
510 |
agaaaaag |
517 |
Q |
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|||||||| |
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| T |
10311326 |
agaaaaag |
10311319 |
T |
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