View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13805_low_25 (Length: 220)

Name: NF13805_low_25
Description: NF13805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13805_low_25
NF13805_low_25
[»] chr5 (21 HSPs)
chr5 (20-200)||(42367007-42367187)
chr5 (19-65)||(9069310-9069356)
chr5 (19-66)||(18756062-18756109)
chr5 (23-66)||(20071427-20071470)
chr5 (20-66)||(11897325-11897371)
chr5 (20-66)||(15241473-15241519)
chr5 (20-66)||(16386688-16386734)
chr5 (20-66)||(16891423-16891469)
chr5 (20-66)||(22931564-22931610)
chr5 (23-65)||(27498657-27498699)
chr5 (20-66)||(29154919-29154965)
chr5 (20-66)||(32423642-32423688)
chr5 (20-66)||(36888342-36888388)
chr5 (20-66)||(39886159-39886205)
chr5 (20-66)||(41179750-41179796)
chr5 (20-66)||(41319398-41319444)
chr5 (20-66)||(42916466-42916512)
chr5 (20-66)||(43580955-43581001)
chr5 (20-65)||(11786008-11786053)
chr5 (20-65)||(16789147-16789192)
chr5 (22-66)||(29713331-29713375)
[»] chr8 (27 HSPs)
chr8 (20-66)||(32258084-32258130)
chr8 (20-65)||(8971461-8971506)
chr8 (20-66)||(29170842-29170888)
chr8 (20-66)||(42801596-42801642)
chr8 (20-65)||(24296819-24296864)
chr8 (23-66)||(34472377-34472420)
chr8 (20-63)||(38745228-38745271)
chr8 (19-66)||(43283913-43283960)
chr8 (20-66)||(94458-94504)
chr8 (20-66)||(5326117-5326163)
chr8 (20-66)||(6942478-6942524)
chr8 (20-66)||(7763886-7763932)
chr8 (20-66)||(8034359-8034405)
chr8 (20-66)||(9407467-9407513)
chr8 (20-66)||(11710361-11710407)
chr8 (20-66)||(11875963-11876009)
chr8 (20-66)||(11890970-11891016)
chr8 (20-66)||(30215339-30215385)
chr8 (20-66)||(33604125-33604171)
chr8 (20-66)||(34413139-34413185)
chr8 (24-66)||(35939568-35939610)
chr8 (20-66)||(36572985-36573031)
chr8 (20-66)||(38344126-38344172)
chr8 (20-66)||(38620288-38620334)
chr8 (20-66)||(40298769-40298815)
chr8 (20-65)||(41846433-41846478)
chr8 (19-55)||(37535457-37535493)
[»] chr7 (19 HSPs)
chr7 (20-66)||(28501234-28501280)
chr7 (20-66)||(12615828-12615874)
chr7 (20-66)||(34051822-34051868)
chr7 (20-66)||(44616679-44616725)
chr7 (19-66)||(3529856-3529903)
chr7 (23-66)||(43624552-43624595)
chr7 (20-66)||(10570-10616)
chr7 (20-66)||(3766888-3766934)
chr7 (20-66)||(7401334-7401380)
chr7 (20-66)||(10226752-10226798)
chr7 (20-66)||(24061276-24061322)
chr7 (20-66)||(28424278-28424324)
chr7 (20-66)||(28805377-28805423)
chr7 (20-66)||(29281289-29281335)
chr7 (20-66)||(30806192-30806238)
chr7 (20-66)||(31077850-31077896)
chr7 (20-66)||(32676889-32676935)
chr7 (20-66)||(42547975-42548021)
chr7 (22-66)||(48288356-48288400)
[»] chr6 (13 HSPs)
chr6 (20-66)||(10501086-10501132)
chr6 (20-66)||(22574947-22574993)
chr6 (19-66)||(5944502-5944549)
chr6 (23-66)||(24618446-24618489)
chr6 (20-66)||(216283-216329)
chr6 (20-66)||(6210131-6210177)
chr6 (20-66)||(7545406-7545452)
chr6 (20-66)||(7865302-7865348)
chr6 (20-66)||(12284198-12284244)
chr6 (20-66)||(22997413-22997459)
chr6 (20-66)||(23790942-23790988)
chr6 (20-66)||(31802130-31802176)
chr6 (20-66)||(31803542-31803588)
[»] chr4 (31 HSPs)
chr4 (20-66)||(23778772-23778818)
chr4 (23-66)||(45741555-45741598)
chr4 (20-66)||(9761192-9761238)
chr4 (20-66)||(18360570-18360616)
chr4 (20-66)||(27743662-27743708)
chr4 (20-66)||(36602313-36602359)
chr4 (20-66)||(37251190-37251236)
chr4 (28-66)||(37310112-37310150)
chr4 (20-66)||(37868514-37868560)
chr4 (20-66)||(56087901-56087947)
chr4 (20-65)||(33325506-33325551)
chr4 (19-66)||(32760718-32760764)
chr4 (20-55)||(37318094-37318129)
chr4 (20-66)||(624557-624603)
chr4 (20-66)||(626929-626975)
chr4 (20-66)||(3847758-3847804)
chr4 (20-66)||(4958503-4958549)
chr4 (20-66)||(5689134-5689180)
chr4 (20-66)||(10417168-10417214)
chr4 (20-66)||(15064149-15064195)
chr4 (20-66)||(27362776-27362822)
chr4 (20-66)||(29505682-29505728)
chr4 (20-66)||(30057299-30057345)
chr4 (20-66)||(36132306-36132352)
chr4 (20-66)||(39696285-39696331)
chr4 (21-63)||(48825769-48825811)
chr4 (20-66)||(55021631-55021677)
chr4 (20-66)||(55531331-55531377)
chr4 (19-65)||(56088611-56088657)
chr4 (25-66)||(10042365-10042406)
chr4 (22-66)||(37920991-37921035)
[»] chr3 (27 HSPs)
chr3 (20-66)||(54447407-54447453)
chr3 (20-59)||(4040171-4040210)
chr3 (25-64)||(28195812-28195851)
chr3 (20-66)||(4860238-4860284)
chr3 (20-66)||(4880246-4880292)
chr3 (20-66)||(23164100-23164146)
chr3 (20-66)||(45512942-45512988)
chr3 (20-65)||(32256502-32256547)
chr3 (20-64)||(34579407-34579451)
chr3 (19-63)||(50536790-50536834)
chr3 (20-55)||(11436581-11436616)
chr3 (20-66)||(3894621-3894667)
chr3 (20-66)||(10349477-10349523)
chr3 (20-66)||(11820081-11820127)
chr3 (20-66)||(17729068-17729114)
chr3 (20-66)||(19030297-19030343)
chr3 (20-66)||(24430226-24430272)
chr3 (20-66)||(27983932-27983978)
chr3 (20-66)||(32429824-32429870)
chr3 (20-66)||(33225295-33225341)
chr3 (20-66)||(43997589-43997635)
chr3 (20-66)||(48546250-48546296)
chr3 (20-66)||(52410188-52410234)
chr3 (21-66)||(9220200-9220245)
chr3 (20-65)||(47098809-47098854)
chr3 (22-66)||(39169832-39169876)
chr3 (21-65)||(54626420-54626464)
[»] chr2 (23 HSPs)
chr2 (20-66)||(43936778-43936824)
chr2 (20-66)||(13606191-13606237)
chr2 (20-65)||(541974-542019)
chr2 (20-65)||(45304901-45304946)
chr2 (26-66)||(41298545-41298585)
chr2 (20-66)||(466553-466599)
chr2 (20-66)||(2289687-2289733)
chr2 (20-66)||(2643774-2643820)
chr2 (20-66)||(4183253-4183299)
chr2 (20-66)||(5112798-5112844)
chr2 (20-66)||(13773477-13773523)
chr2 (20-66)||(16040318-16040364)
chr2 (20-66)||(28153089-28153135)
chr2 (20-66)||(28302236-28302282)
chr2 (20-66)||(36182719-36182765)
chr2 (23-65)||(39084944-39084985)
chr2 (20-66)||(40403627-40403672)
chr2 (21-66)||(8250248-8250293)
chr2 (20-57)||(9423862-9423899)
chr2 (20-65)||(40688587-40688632)
chr2 (20-65)||(43398386-43398431)
chr2 (20-52)||(30871282-30871314)
chr2 (20-48)||(33262519-33262547)
[»] chr1 (24 HSPs)
chr1 (20-60)||(43667910-43667950)
chr1 (20-63)||(32556879-32556922)
chr1 (20-66)||(2754437-2754483)
chr1 (20-66)||(10478217-10478263)
chr1 (20-66)||(42848686-42848732)
chr1 (20-66)||(43884871-43884917)
chr1 (20-66)||(44732710-44732756)
chr1 (19-66)||(33033202-33033249)
chr1 (20-63)||(35283578-35283621)
chr1 (20-55)||(42490368-42490403)
chr1 (19-66)||(51933582-51933629)
chr1 (20-66)||(4553493-4553539)
chr1 (20-66)||(6213498-6213544)
chr1 (20-66)||(13538393-13538439)
chr1 (20-66)||(16343105-16343151)
chr1 (20-66)||(16526124-16526170)
chr1 (20-66)||(19063280-19063326)
chr1 (20-66)||(27642674-27642720)
chr1 (20-66)||(29188713-29188759)
chr1 (20-66)||(32589436-32589482)
chr1 (20-66)||(40375262-40375308)
chr1 (20-65)||(50746788-50746833)
chr1 (20-52)||(25580765-25580797)
chr1 (20-60)||(36726638-36726678)
[»] scaffold0068 (1 HSPs)
scaffold0068 (20-66)||(45987-46033)
[»] scaffold0003 (2 HSPs)
scaffold0003 (20-65)||(315726-315771)
scaffold0003 (23-66)||(304032-304075)
[»] scaffold0121 (1 HSPs)
scaffold0121 (20-64)||(12071-12115)
[»] scaffold0063 (1 HSPs)
scaffold0063 (19-66)||(56399-56446)
[»] scaffold0394 (1 HSPs)
scaffold0394 (20-66)||(1339-1385)
[»] scaffold0254 (1 HSPs)
scaffold0254 (20-66)||(1394-1440)
[»] scaffold0085 (1 HSPs)
scaffold0085 (20-66)||(27877-27923)
[»] scaffold0036 (1 HSPs)
scaffold0036 (20-66)||(39723-39769)
[»] scaffold0024 (1 HSPs)
scaffold0024 (20-66)||(59860-59906)
[»] scaffold1787 (1 HSPs)
scaffold1787 (20-57)||(477-514)


Alignment Details
Target: chr5 (Bit Score: 129; Significance: 6e-67; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 42367007 - 42367187
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgacnnnnnnnntaaattggcccttcattctaaatttaaatatatgtgggcaaattc 119  Q
    ||||||||||||||||||| |||  ||||||||||| |||| ||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  42367007 ttctccacaattaaattgtatgagctctaaccactagactatttgataaaaaaaaaaaattggcccttcattctaaatttaaatatatgtgggcaaattc 42367106  T
Q  120 accacatgcattcattgtatttattcactagttattttcaatttttaaattttctataaattgaattgctattaaacttaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42367107 accacatgcattcattgtatttattcactagttattttcaatttttaaattttctataaattgaattgctattaaacttaa 42367187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 9069310 - 9069356
Alignment:
Q  19 tttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||    
T  9069310 tttctccacaattaaactgtgtgagctctaaccactaaactacttga 9069356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 18756062 - 18756109
Alignment:
Q  19 tttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||| ||||||||||||||||| ||||| |||||| ||||||||||    
T  18756062 tttctctacaattaaattgtgtgagttctagccactagactacttgac 18756109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 20071470 - 20071427
Alignment:
Q  23 tccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||    
T  20071470 tccataattaaattgtgtgaattctagccactagactacttgac 20071427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 11897325 - 11897371
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  11897325 ttctccacaattaaattgtgtgagctctagccactagactacttgac 11897371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 15241473 - 15241519
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  15241473 ttctccacaattaaattgtgtgagctctagccactagactacttgac 15241519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 16386734 - 16386688
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  16386734 ttctccacaattaaattgtgtgagctctagccactagactacttgac 16386688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 16891423 - 16891469
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  16891423 ttctccacaattaaattgtgtgagctctagccactagactacttgac 16891469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 22931610 - 22931564
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||| ||||||||||||||||||  ||||||||||| ||||||||||    
T  22931610 ttcttcacaattaaattgtgtgagctctaaccactagactacttgac 22931564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 27498657 - 27498699
Alignment:
Q  23 tccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    ||||||||||||||||||||  |||| ||||||||||||||||    
T  27498657 tccacaattaaattgtgtgagctctagccactaaactacttga 27498699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 29154919 - 29154965
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||| ||||||  |||||||||    
T  29154919 ttctccacaattaaattgtgtgagttctagccactacgctacttgac 29154965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 32423642 - 32423688
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||| |||||||||| ||||| |||||| ||||||||||    
T  32423642 ttctccacaatttaattgtgtgagttctagccactagactacttgac 32423688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 36888388 - 36888342
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| ||||||| |||||||||    
T  36888388 ttctccacaattaaattgtgtgagctctagccactaagctacttgac 36888342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 39886205 - 39886159
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  39886205 ttctccacaattaaattgtgtgagctctagccactagactacttgac 39886159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 41179796 - 41179750
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||| |||||||||||||  |||| |||||||||||||||||    
T  41179796 ttctccacatttaaattgtgtgagctctagccactaaactacttgac 41179750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 41319444 - 41319398
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  41319444 ttctccacaattaaattgtgtgagctctagccactagactacttgac 41319398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 42916466 - 42916512
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  | || |||||||||||||||||    
T  42916466 ttctccacaattaaattgtgtgagctttagccactaaactacttgac 42916512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 43580955 - 43581001
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  43580955 ttctccacaattaaattgtgtgagctctagccactagactacttgac 43581001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 11786053 - 11786008
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    |||||||||||||||||||||||  |||| |||||| |||||||||    
T  11786053 ttctccacaattaaattgtgtgagctctagccactagactacttga 11786008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 16789147 - 16789192
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    |||||||||||||||||||||||  |||| |||||| |||||||||    
T  16789147 ttctccacaattaaattgtgtgagctctagccactagactacttga 16789192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 29713375 - 29713331
Alignment:
Q  22 ctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||| ||||  ||||| ||||||||||    
T  29713375 ctccacaattaaattgtgtgaactctattcactagactacttgac 29713331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 32258084 - 32258130
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  32258084 ttctccacaattaaattgtgtgagctctaaccactaaactacttgac 32258130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 8971506 - 8971461
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  8971506 ttctccacaattaaattgtgtgagttctagccactaaactacttga 8971461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 29170842 - 29170888
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  29170842 ttctccacaattaaattgtgtgagttctagccactagactacttgac 29170888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 42801642 - 42801596
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  42801642 ttctccataattaaattgtgtgagttctaaccactagactacttgac 42801596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 24296864 - 24296819
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||    
T  24296864 ttctccacaattaaattgtgtgagttctagccactacactacttga 24296819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 34472377 - 34472420
Alignment:
Q  23 tccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||    
T  34472377 tccacaattaaattgtgtgagctctaaccactagactacttgac 34472420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 38745271 - 38745228
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactactt 63  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||    
T  38745271 ttctccacaattaaattgtgtgatttctagccactagactactt 38745228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 43283960 - 43283913
Alignment:
Q  19 tttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||||  |||| |||||| ||||||||||    
T  43283960 tttctccacaattaaattgtgtgagctctagccactagactacttgac 43283913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 94504 - 94458
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  94504 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 94458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 5326163 - 5326117
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||| |||||||||||||||| |||| |||||| ||||||||||    
T  5326163 ttctccataattaaattgtgtgaactctagccactagactacttgac 5326117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 6942524 - 6942478
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  6942524 ttctccacaattaaattgtgtgagctctagccactagactacttgac 6942478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 7763932 - 7763886
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| ||||||| |||||||||    
T  7763932 ttctccacaattaaattgtgtgagctctagccactaagctacttgac 7763886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 8034405 - 8034359
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||| ||||||  |||||||||    
T  8034405 ttctccacaattaaattgtgtgagttctagccactaggctacttgac 8034359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 9407467 - 9407513
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||| ||||||||||  |||| |||||||||||||||||    
T  9407467 ttctccacaatttaattgtgtgagctctagccactaaactacttgac 9407513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 11710361 - 11710407
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||| |||||||||| ||||||||||||  |||||||||    
T  11710361 ttctccacaatttaattgtgtgagttctaaccactaggctacttgac 11710407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 11875963 - 11876009
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  11875963 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 11876009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 11890970 - 11891016
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  11890970 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 11891016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 30215339 - 30215385
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||| |||||||| ||  |||||||||    
T  30215339 ttctccacaattaaattgtgtgaactctaaccattaggctacttgac 30215385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 33604171 - 33604125
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||| |||||| || |||||||    
T  33604171 ttctccacaattaaattgtgtgagttctagccactagacaacttgac 33604125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 34413139 - 34413185
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  34413139 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 34413185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 35939568 - 35939610
Alignment:
Q  24 ccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||    
T  35939568 ccacaattaaattgtgtgagttctagccactaagctacttgac 35939610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 36572985 - 36573031
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||| |||| ||||||  |||||||||    
T  36572985 ttctccacaattaaattgtgtgaactctagccactacgctacttgac 36573031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 38344126 - 38344172
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  38344126 ttctccacaattaaattgtgtgagctctagccactagactacttgac 38344172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 38620334 - 38620288
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||| |||| ||||||  |||||||||    
T  38620334 ttctccacaattaaattgtgtgaactctagccactaggctacttgac 38620288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 40298769 - 40298815
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||| ||||||||||| |||| |||||| ||||||||||    
T  40298769 ttctccacaatttaattgtgtgaactctagccactagactacttgac 40298815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 41846433 - 41846478
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    ||||||||||||||||||||||| || ||  |||||||||||||||    
T  41846433 ttctccacaattaaattgtgtgagttttagtcactaaactacttga 41846478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 37535493 - 37535457
Alignment:
Q  19 tttctccacaattaaattgtgtgaattctaaccacta 55  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  37535493 tttctccacaatttaattgtgtgaactctaaccacta 37535457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 28501234 - 28501280
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  28501234 ttctccacaattaaattgtgtgagctctaaccactaaactacttgac 28501280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 12615828 - 12615874
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  12615828 ttctccacaattaaattgtgtgagctctaaccactagactacttgac 12615874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 34051868 - 34051822
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||    
T  34051868 ttctccacaattaaattgtgtgagttctaaccaatagactacttgac 34051822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 44616679 - 44616725
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  44616679 ttctccacaattaaattgtgtgagctctaaccactagactacttgac 44616725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 3529856 - 3529903
Alignment:
Q  19 tttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||||  |||| |||||| ||||||||||    
T  3529856 tttctccacaattaaattgtgtgagctctagccactagactacttgac 3529903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 43624552 - 43624595
Alignment:
Q  23 tccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||| |  ||||||||||||||||||||    
T  43624552 tccacaattaaattgtgtgagtcataaccactaaactacttgac 43624595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 10616 - 10570
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||| |||||||||| ||||||||| || ||||||||||    
T  10616 ttctccacaatttaattgtgtgagttctaaccattagactacttgac 10570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 3766888 - 3766934
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  3766888 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 3766934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 7401380 - 7401334
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  7401380 ttctccacaattaaattgtgtgagctctagccactagactacttgac 7401334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 10226752 - 10226798
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||   ||||||||||| ||||||||||    
T  10226752 ttctccacaattaaattgtgtgcgctctaaccactagactacttgac 10226798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 24061322 - 24061276
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  24061322 ttctccacaattaaattgtgtgagctctagccactagactacttgac 24061276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 28424324 - 28424278
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||| ||||||||||||||||||  ||||||||||| ||||||||||    
T  28424324 ttcttcacaattaaattgtgtgagctctaaccactagactacttgac 28424278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 28805377 - 28805423
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||| ||||  ||||||||||| ||||||||||    
T  28805377 ttctccacaattaaattgagtgagctctaaccactagactacttgac 28805423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 29281335 - 29281289
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  29281335 ttctccacaattaaattgtgtgagctctagccactagactacttgac 29281289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 30806192 - 30806238
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||| |||| || |||||||||    
T  30806192 ttctccacaattaaattgtgtgagttctagccaccaagctacttgac 30806238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 31077896 - 31077850
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  31077896 ttctccacaattaaattgtgtgagctctagccactagactacttgac 31077850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 32676935 - 32676889
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| ||||||| |||||||||    
T  32676935 ttctccacaattaaattgtgtgagctctagccactaagctacttgac 32676889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 42548021 - 42547975
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||||||| ||  |||||||||    
T  42548021 ttctccacaattaaattgtgtgagttctaaccattaggctacttgac 42547975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 48288400 - 48288356
Alignment:
Q  22 ctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||  |||| |||||| ||||||||||    
T  48288400 ctccacaattaaattgtgtgagctctagccactagactacttgac 48288356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 10501132 - 10501086
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||    
T  10501132 ttctccacaatttaattgtgtgagttctaaccactaaactacttgac 10501086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 22574947 - 22574993
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  22574947 ttctccacaattaaattgtgtgagctctaaccactagactacttgac 22574993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 5944502 - 5944549
Alignment:
Q  19 tttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||| ||||||||| ||||||||| | ||||||||||    
T  5944502 tttctccacaattaagttgtgtgaactctaaccacaagactacttgac 5944549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 24618489 - 24618446
Alignment:
Q  23 tccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||| ||||| |||||| ||||||||||    
T  24618489 tccacaattaaattgtgtgagttctagccactagactacttgac 24618446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 216283 - 216329
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  216283 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 216329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 6210131 - 6210177
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||| |||||||||| ||||||||||||  |||||||||    
T  6210131 ttctccacaatttaattgtgtgagttctaaccactatgctacttgac 6210177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 7545406 - 7545452
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  7545406 ttctccacaattaaattgtgtgagctctagccactagactacttgac 7545452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 7865348 - 7865302
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||||    
T  7865348 ttctccacaatttaattgtgtgagttctagccactaagctacttgac 7865302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 12284198 - 12284244
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  12284198 ttctccacaattaaattgtgtgagctctagccactagactacttgac 12284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 22997413 - 22997459
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  22997413 ttctccacaattaaattgtgtgagctctagccactagactacttgac 22997459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 23790988 - 23790942
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  23790988 ttctccacaattaaattgtgtgagctctagccactagactacttgac 23790942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 31802130 - 31802176
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  31802130 ttctccacaattaaattgtgtgagctctagccactagactacttgac 31802176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 31803588 - 31803542
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  31803588 ttctccacaattaaattgtgtgagctctagccactagactacttgac 31803542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 23778818 - 23778772
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  23778818 ttctccacaattaaattgtgtgagctctaaccactaaactacttgac 23778772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 45741555 - 45741598
Alignment:
Q  23 tccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  45741555 tccacaattaaattgtgtgaactctaaccactagactacttgac 45741598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 9761192 - 9761238
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  9761192 ttctccacaattaaattgtgtgagctctaaccactagactacttgac 9761238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 18360570 - 18360616
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||    
T  18360570 ttctccacaattaaattgtgtgagttctaaccactggactacttgac 18360616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 27743708 - 27743662
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||||    
T  27743708 ttctccacaattaaattgtgtgatttctaactactagactacttgac 27743662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 36602359 - 36602313
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| |||||||||||  ||||||||||    
T  36602359 ttctccacaattaaattgtgtgagttctaaccactggactacttgac 36602313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 37251190 - 37251236
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||    
T  37251190 ttctccacaattaaattgtgtgaactctagccactagactacttgac 37251236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 37310112 - 37310150
Alignment:
Q  28 aattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  37310112 aattaaattgtgtgaattctaaccactagactacttgac 37310150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 37868560 - 37868514
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||    
T  37868560 ttctccacaattaaattgtgtgagctctaaccactaaactatttgac 37868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 56087947 - 56087901
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  56087947 ttctccacaattaaattgtgtgagttctagccactagactacttgac 56087901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 33325506 - 33325551
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||    
T  33325506 ttctccacaattaaattgtgtgagctctagccactaaactacttga 33325551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 32760718 - 32760764
Alignment:
Q  19 tttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  32760718 tttctccacaattaa-ttgtgtgaattctagccactagactacttgac 32760764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 37318129 - 37318094
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccacta 55  Q
    ||||||||||||||||||||||| ||||||||||||    
T  37318129 ttctccacaattaaattgtgtgagttctaaccacta 37318094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 624557 - 624603
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||| ||||| |||||||  ||||||||||||||||||||||    
T  624557 ttctccacatttaaaatgtgtgagctctaaccactaaactacttgac 624603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 626975 - 626929
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  626975 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 626929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 3847758 - 3847804
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||| ||||||  |||||||||    
T  3847758 ttctccacaattaaattgtgtgagttctagccactaggctacttgac 3847804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 4958549 - 4958503
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||||    
T  4958549 ttctccacaattaaattatgtgagctttaaccactaaactacttgac 4958503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 5689134 - 5689180
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||| ||||||||||||||||||||| ||||||  |||||||||    
T  5689134 ttctccataattaaattgtgtgaattctagccactaggctacttgac 5689180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 10417214 - 10417168
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  10417214 ttctccacaattaaattgtgtgagctctagccactagactacttgac 10417168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 15064195 - 15064149
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||| |||||||||||||||  |||| |||||||||||||||||    
T  15064195 ttctccataattaaattgtgtgagctctagccactaaactacttgac 15064149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 27362822 - 27362776
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||| | | |||||||||||||    
T  27362822 ttctccacaattaaattgtgtgagttctatcaattaaactacttgac 27362776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 29505728 - 29505682
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||| |||||||||||||||||  |||| |||||||||||||||||    
T  29505728 ttctcgacaattaaattgtgtgagctctagccactaaactacttgac 29505682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 30057299 - 30057345
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  30057299 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 30057345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 36132306 - 36132352
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  36132306 ttctccacaattaaattgtgtgaggtctaaccactaggctacttgac 36132352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 39696331 - 39696285
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  39696331 ttctccacaattaaattgtgtgagctctagccactagactacttgac 39696285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 48825811 - 48825769
Alignment:
Q  21 tctccacaattaaattgtgtgaattctaaccactaaactactt 63  Q
    ||||||||||||||||||||||  ||||||||||| |||||||    
T  48825811 tctccacaattaaattgtgtgagctctaaccactagactactt 48825769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 55021631 - 55021677
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  55021631 ttctccacaattaaattgtgtgagctctagccactagactacttgac 55021677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 55531331 - 55531377
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||| |||||||||||||||||| |||| ||||||| |||||||||    
T  55531331 ttctcgacaattaaattgtgtgaactctagccactaagctacttgac 55531377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 56088611 - 56088657
Alignment:
Q  19 tttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    |||||||||||||||||||||||| ||||| | |||| |||||||||    
T  56088611 tttctccacaattaaattgtgtgagttctagctactagactacttga 56088657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 10042406 - 10042365
Alignment:
Q  25 cacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||| |||||||||||  |||||||||    
T  10042406 cacaattaaattgtgtgaactctaaccactaggctacttgac 10042365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 37921035 - 37920991
Alignment:
Q  22 ctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||| |||| | |||| ||||||||||    
T  37921035 ctccacaattaaattgtgtgaactctagcaactagactacttgac 37920991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 54447407 - 54447453
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||    
T  54447407 ttctccacaattaaattgtgtgaactctaaccattaaactacttgac 54447453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 4040171 - 4040210
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaact 59  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  4040171 ttctccacaattaaattgtgtgaattctaaccattaaact 4040210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 64
Target Start/End: Original strand, 28195812 - 28195851
Alignment:
Q  25 cacaattaaattgtgtgaattctaaccactaaactacttg 64  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  28195812 cacaattaaattgtgtgagttctaaccactaaactacttg 28195851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 4860238 - 4860284
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  4860238 ttctccacaattaaattgtgtgagctctaaccactagactacttgac 4860284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 4880246 - 4880292
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  4880246 ttctccacaattaaattgtgtgagctctaaccactagactacttgac 4880292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 23164146 - 23164100
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||    
T  23164146 ttctccacaattaaattgtgtgagctctagccactaaactacttgac 23164100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 45512988 - 45512942
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||    
T  45512988 ttctccacaattaaattgtgtgagctctaaccactagactacttgac 45512942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 32256547 - 32256502
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||    
T  32256547 ttctccacaattaaattgtgtgagctctagccactaaactacttga 32256502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 34579451 - 34579407
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttg 64  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||    
T  34579451 ttctccacaattaaattgtgtgaactctagccactagactacttg 34579407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 50536834 - 50536790
Alignment:
Q  19 tttctccacaattaaattgtgtgaattctaaccactaaactactt 63  Q
    ||||| |||||||||||||| |||| |||||||||||||||||||    
T  50536834 tttcttcacaattaaattgtttgaactctaaccactaaactactt 50536790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 11436581 - 11436616
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccacta 55  Q
    ||||||||||||||||||||||| ||||||||||||    
T  11436581 ttctccacaattaaattgtgtgagttctaaccacta 11436616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 3894621 - 3894667
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  3894621 ttctccacaattaaattgtgtgagctctagccactagactacttgac 3894667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 10349477 - 10349523
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  10349477 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 10349523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 11820081 - 11820127
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  11820081 ttctccacaattaaattgtgtgagctctagccactagactacttgac 11820127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 17729068 - 17729114
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  17729068 ttctccacaattaaattgtgtgagctctagccactagactacttgac 17729114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 19030297 - 19030343
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  19030297 ttctccacaattaaattgtgtgagctctagccactagactacttgac 19030343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 24430226 - 24430272
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  24430226 ttctccacaattaaattgtgtgagctctagccactagactacttgac 24430272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 27983932 - 27983978
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||| |||  |||| |||||||||||||||||    
T  27983932 ttctccacaattaaattgtatgagctctagccactaaactacttgac 27983978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 32429824 - 32429870
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  32429824 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 32429870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 33225341 - 33225295
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| ||||||| |||||||||    
T  33225341 ttctccacaattaaattgtgtgagctctagccactaagctacttgac 33225295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 43997635 - 43997589
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||||| |||  ||||||||||    
T  43997635 ttctccacaattaaattgtgtgagttctaactactggactacttgac 43997589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 48546250 - 48546296
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||| |||||||||||||||||  |||||||||||| |||||||||    
T  48546250 ttctctacaattaaattgtgtgagctctaaccactaagctacttgac 48546296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 52410234 - 52410188
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  52410234 ttctccacaattaaattgtgtgagctctagccactagactacttgac 52410188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 9220245 - 9220200
Alignment:
Q  21 tctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||  |||| ||||||||||| |||||    
T  9220245 tctccacaattaaattgtgtgagctctagccactaaactatttgac 9220200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 47098809 - 47098854
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    |||||||||||||||||||||||  |||| ||||||| ||||||||    
T  47098809 ttctccacaattaaattgtgtgagctctagccactaagctacttga 47098854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 39169832 - 39169876
Alignment:
Q  22 ctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||| ||||||||||  ||||||||||| ||||||||||    
T  39169832 ctccacaatttaattgtgtgagctctaaccactatactacttgac 39169876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 54626420 - 54626464
Alignment:
Q  21 tctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    ||||||||||||||||||||||  |||| |||||| |||||||||    
T  54626420 tctccacaattaaattgtgtgagctctagccactagactacttga 54626464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 43936778 - 43936824
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  43936778 ttctccacaattaaattgtgtgagctctaaccactaaactacttgac 43936824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 13606237 - 13606191
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||    
T  13606237 ttctccacaattaaattgtgtgagctctaaccactaagctacttgac 13606191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 542019 - 541974
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  542019 ttctccacaattaaattgtgtgagttctagccattaaactacttga 541974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 45304946 - 45304901
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||||    
T  45304946 ttctccacaattaaattatgtgaactctaaccaataaactacttga 45304901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 41298545 - 41298585
Alignment:
Q  26 acaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  41298545 acaattaaattgtgtgagctctaaccactaaactacttgac 41298585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 466599 - 466553
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||| |||| ||||||  |||||||||    
T  466599 ttctccacaattaaattgtgtgaactctatccactaggctacttgac 466553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 2289687 - 2289733
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||| |||||||||| ||||||||||||  |||||||||    
T  2289687 ttctccacaatttaattgtgtgagttctaaccactaggctacttgac 2289733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 2643774 - 2643820
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| ||||||| |||||||||    
T  2643774 ttctccacaattaaattgtgtgagctctagccactaagctacttgac 2643820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 4183253 - 4183299
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||| |||| ||||||  |||||||||    
T  4183253 ttctccacaattaaattgtgtgaactctagccactaggctacttgac 4183299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 5112844 - 5112798
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  5112844 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 5112798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 13773477 - 13773523
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  13773477 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 13773523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 16040318 - 16040364
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||||  ||||||||    
T  16040318 ttctccacaattaaattgtgtgagctctaaccactaagttacttgac 16040364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 28153135 - 28153089
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  28153135 ttctccacaattaaattgtgtgagctctagccactagactacttgac 28153089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 28302282 - 28302236
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||| |||||||||||| ||||||||| || ||||||||||    
T  28302282 ttctccacaaataaattgtgtgagttctaaccattagactacttgac 28302236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 36182719 - 36182765
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  36182719 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 36182765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 39084944 - 39084985
Alignment:
Q  23 tccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  39084944 tccacaattaaattgtgtgagt-ctaaccactaaactacttga 39084985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 40403627 - 40403672
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||    
T  40403627 ttctccacaattaa-ttgtgtgagctctaaccactaaactacttgac 40403672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 8250293 - 8250248
Alignment:
Q  21 tctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||  ||||||||||| | ||||||||    
T  8250293 tctccacaattaaattgtgtgagctctaaccactagaatacttgac 8250248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 9423899 - 9423862
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaa 57  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  9423899 ttctctacaattaaattgtgtgaattctagccactaaa 9423862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 40688632 - 40688587
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    |||||||||||||||||||||||  |||||||||||  ||||||||    
T  40688632 ttctccacaattaaattgtgtgagctctaaccactaggctacttga 40688587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 43398386 - 43398431
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||||    
T  43398386 ttctcaacaattaaattgtgtgagctctaaccactagactacttga 43398431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 30871314 - 30871282
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaacca 52  Q
    |||||||||||||||||||||||| ||||||||    
T  30871314 ttctccacaattaaattgtgtgaactctaacca 30871282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 48
Target Start/End: Original strand, 33262519 - 33262547
Alignment:
Q  20 ttctccacaattaaattgtgtgaattcta 48  Q
    |||||||||||||||||||||||||||||    
T  33262519 ttctccacaattaaattgtgtgaattcta 33262547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 43667950 - 43667910
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaacta 60  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  43667950 ttctccacaattaaattgtgtgagttctaaccactaaacta 43667910  T

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Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 32556922 - 32556879
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactactt 63  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  32556922 ttctccacaattaaattgtgtgacttctaaccactagactactt 32556879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 2754437 - 2754483
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||    
T  2754437 ttctccacaattaaattgtgtgagctctagccactaaactacttgac 2754483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 10478217 - 10478263
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||    
T  10478217 ttctgcacaattaaattgtgtgagctctaaccactaaactacttgac 10478263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 42848732 - 42848686
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||| |||||||||||||||| |||||||||||| ||||||||||    
T  42848732 ttctccgcaattaaattgtgtgagttctaaccactagactacttgac 42848686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 43884871 - 43884917
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  43884871 ttctccacaattaaattgtgtgagttctagccactagactacttgac 43884917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 44732710 - 44732756
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||    
T  44732710 ttctccacaattaaattgtgtgaactctagccactagactacttgac 44732756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 33033202 - 33033249
Alignment:
Q  19 tttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||| |||||||  ||||||||||| ||||||||||    
T  33033202 tttctccacaattaaaatgtgtgagctctaaccactagactacttgac 33033249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 35283578 - 35283621
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactactt 63  Q
    |||||||||||| ||||||||||  |||||||||||||||||||    
T  35283578 ttctccacaatttaattgtgtgagctctaaccactaaactactt 35283621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 42490403 - 42490368
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccacta 55  Q
    |||||||||||||||||||||||| |||||||||||    
T  42490403 ttctccacaattaaattgtgtgaactctaaccacta 42490368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 51933582 - 51933629
Alignment:
Q  19 tttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||||  |||| |||||| ||||||||||    
T  51933582 tttctccacaattaaattgtgtgaggtctagccactacactacttgac 51933629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 4553539 - 4553493
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  ||||||||||| | ||||||||    
T  4553539 ttctccacaattaaattgtgtgagctctaaccactagattacttgac 4553493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 6213498 - 6213544
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||| |||||||||||||||||| ||||| |||||| ||||||||||    
T  6213498 ttcttcacaattaaattgtgtgagttctagccactagactacttgac 6213544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 13538439 - 13538393
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||| |||||||||| ||||| |||||| ||||||||||    
T  13538439 ttctccacaatttaattgtgtgagttctagccactatactacttgac 13538393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 16343105 - 16343151
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| ||||||| |||||||||    
T  16343105 ttctccacaattaaattgtgtgagctctagccactaagctacttgac 16343151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 16526170 - 16526124
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  16526170 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 16526124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 19063326 - 19063280
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||| ||||||||||  |||||| |||||||||||||||    
T  19063326 ttctccacaatttaattgtgtgagctctaactactaaactacttgac 19063280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 27642720 - 27642674
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  27642720 ttctccacaattaaattgtgtgagctctagccactagactacttgac 27642674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 29188713 - 29188759
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  29188713 ttctccacaattaaattgtgtgagctctagccactagactacttgac 29188759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 32589482 - 32589436
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  32589482 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 32589436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 40375308 - 40375262
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||    
T  40375308 ttctccacaattaaattgtgtgagctctaaccactaggctacttgac 40375262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 50746788 - 50746833
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    |||||||||||||||||||| ||  ||||||||||| |||||||||    
T  50746788 ttctccacaattaaattgtgcgagctctaaccactagactacttga 50746833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 25580765 - 25580797
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaacca 52  Q
    ||||||||||||||||||||||| |||||||||    
T  25580765 ttctccacaattaaattgtgtgagttctaacca 25580797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 36726638 - 36726678
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaacta 60  Q
    |||||||||||||||||||||||  ||||||||||| ||||    
T  36726638 ttctccacaattaaattgtgtgagctctaaccactagacta 36726678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 45987 - 46033
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||| |||||||||| ||||| |||||||||||||||||    
T  45987 ttctccacaatttaattgtgtgagttctagccactaaactacttgac 46033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 315726 - 315771
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttga 65  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||    
T  315726 ttctccacatttaaaatgtgtgaactctaaccactaaactacttga 315771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 304075 - 304032
Alignment:
Q  23 tccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||    
T  304075 tccataattaaattgtgtgaattctagccactagactacttgac 304032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 12071 - 12115
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttg 64  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||    
T  12071 ttctccacaattaaattgtgtgaactctagccactagactacttg 12115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 56399 - 56446
Alignment:
Q  19 tttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||| || || |||||| ||||||||||    
T  56399 tttctccacaattaaattgtgtgagttttagccactagactacttgac 56446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 1339 - 1385
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| ||||||| |||||||||    
T  1339 ttctccacaattaaattgtgtgagctctagccactaagctacttgac 1385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 1394 - 1440
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| ||||||| |||||||||    
T  1394 ttctccacaattaaattgtgtgagctctagccactaagctacttgac 1440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 27923 - 27877
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    ||||||||||||||||||||||| ||||| ||||||  |||||||||    
T  27923 ttctccacaattaaattgtgtgagttctagccactaggctacttgac 27877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 39723 - 39769
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||| ||||||||||||||||||  |||||| |||||||||||||||    
T  39723 ttcttcacaattaaattgtgtgagctctaactactaaactacttgac 39769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 59860 - 59906
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaactacttgac 66  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  59860 ttctccacaattaaattgtgtgagctctagccactagactacttgac 59906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1787 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1787
Description:

Target: scaffold1787; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 477 - 514
Alignment:
Q  20 ttctccacaattaaattgtgtgaattctaaccactaaa 57  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  477 ttctctacaattaaattgtgtgaactctaaccactaaa 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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