View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13807_low_3 (Length: 360)
Name: NF13807_low_3
Description: NF13807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13807_low_3 |
 | |
|
| [»] scaffold0692 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 181; Significance: 1e-97; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 12907668 - 12907988
Alignment:
| Q |
1 |
tatccacttatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatct |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
12907668 |
tatccacttgtggtgacatgtatagctttggaatccttatgctggaaatgcttactggtagaagacccactgatgaactttttgaagatggtcaaaatct |
12907767 |
T |
|
| Q |
101 |
gcataactttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaat |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| || ||||||||| | || |||| || |||||| || ||||| || ||||||||||| || | |
|
|
| T |
12907768 |
gcataactttgttacaatttcatttcctgataatcttataaagattttggatccacatcttttaccaagagctgaagaaggaggaatagaagatggaatt |
12907867 |
T |
|
| Q |
201 |
tgtgagaatcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattg |
300 |
Q |
| |
|
||||| ||||| ||||| |||||||||||||||| |||||||||||||||||||||| | ||| || |||||||| ||||||||||||||||||||| |
|
|
| T |
12907868 |
catgagattcttattccaaatgtagaggagtgcttaacttcactttttaggattggacttttatgttcattggaatcaacaaaagaaagaatgaatattg |
12907967 |
T |
|
| Q |
301 |
tggatgtcactagagagctta |
321 |
Q |
| |
|
| ||||||| ||||||||||| |
|
|
| T |
12907968 |
tagatgtcaatagagagctta |
12907988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 12958556 - 12958876
Alignment:
| Q |
1 |
tatccacttatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatct |
100 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
12958556 |
tatccacatgtggtgacatgtatagctttggaatccttatgctggaaatgcttactggtagaagacccactgatgaactttttgaagatggtcaaaatct |
12958655 |
T |
|
| Q |
101 |
gcataactttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaat |
200 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||| | || ||| ||||| | || |||| || |||||| || ||| | ||||| |||||||| |||| |
|
|
| T |
12958656 |
gcataactttgttacaaattcatttcctgataatctaataaagatgttggatccacatcttttaccaagagctgaagatggagcaagagaagatggaaat |
12958755 |
T |
|
| Q |
201 |
tgtgagaatcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattg |
300 |
Q |
| |
|
||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| | ||| || |||||||||||||||||||||||||||||| |
|
|
| T |
12958756 |
catgagattcttattccaactgtagaggagtgcttagtttcactttttaggattggacttttatgttcattggaatcaccaaaagaaagaatgaatattg |
12958855 |
T |
|
| Q |
301 |
tggatgtcactagagagctta |
321 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
12958856 |
tcgatgtcactagagagctta |
12958876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 12900048 - 12900371
Alignment:
| Q |
1 |
tatccacttatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatct |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
12900048 |
tatccacttgtggtgacatgtatagctttggaatccttatgctggaaatgcttactggtagaagacccactgatgaactttttgaagatggtcaaaatct |
12900147 |
T |
|
| Q |
101 |
gcataactttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtaga---agtagcaatagaagatgaa |
197 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| || ||||||||| | || |||| || |||||| || ||| || |||||||||||||| | |
|
|
| T |
12900148 |
gcataactttgttacaatttcatttcctgataatcttataaagattttggatccacatcttttaccaagagctgaagaattaggagcaatagaagatgga |
12900247 |
T |
|
| Q |
198 |
aattgtgagaatcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaata |
297 |
Q |
| |
|
||| ||||| || || ||||| | |||| |||||||||||||||||| ||||||||| |||| | ||| | ||||||||||||||||||||||||||| |
|
|
| T |
12900248 |
aatcatgagattcatattccaactatagaagagtgcttagtttcacttcttaggattgcacttttatgttctttggaatcaccaaaagaaagaatgaata |
12900347 |
T |
|
| Q |
298 |
ttgtggatgtcactagagagctta |
321 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
12900348 |
ttgtggatgtcactagagagctta |
12900371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 11 - 321
Target Start/End: Original strand, 12932767 - 12933077
Alignment:
| Q |
11 |
tggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgcataacttt |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| | ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
12932767 |
tggtgacatgtatagctttggaatccttatgctggaaatgcttactggtagaagacccaccgatgaactttttgaagatggtcaaaatctgcataacttt |
12932866 |
T |
|
| Q |
111 |
gttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaattgtgagaatc |
210 |
Q |
| |
|
||| |||||||||||||||||||||||| || ||||||||| | || |||| || |||||| || ||||| |||||||||||||| |||| ||||| || |
|
|
| T |
12932867 |
gttacaatttcatttcctgataatcttataaagattttggatccacatcttttaccaagagctgaagaaggagcaatagaagatggaaatcatgagattc |
12932966 |
T |
|
| Q |
211 |
ttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgtcac |
310 |
Q |
| |
|
|| ||||| | |||| || ||||| ||||||||| ||||||||| |||| | ||| | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12932967 |
atattccaactatagaagattgctttgtttcacttcttaggattgcacttttatgttctttggaatcaccaaaagaaagaatgaatattgtggatgtcac |
12933066 |
T |
|
| Q |
311 |
tagagagctta |
321 |
Q |
| |
|
||||||||||| |
|
|
| T |
12933067 |
tagagagctta |
12933077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 12949111 - 12949417
Alignment:
| Q |
1 |
tatccacttatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatct |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
12949111 |
tatccacttgtggtgacatgtatagctttggaatccttatgctggaaatgcttactggtagaagacccactgatgaactttttgaagatggtcaaaatct |
12949210 |
T |
|
| Q |
101 |
gcataactttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaat |
200 |
Q |
| |
|
||||||||||||| |||||||||||| ||||| | || ||||||||| | || |||| || |||||| | ||||||| |||| |
|
|
| T |
12949211 |
gcataactttgttaaaatttcatttcccaataatttcgtaaagattttggatccacatcttttaccaagagct---------------gaagatggaaat |
12949295 |
T |
|
| Q |
201 |
tgtgagaatcttaatccaagtgtagaggagtgcttagttt-cactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatatt |
299 |
Q |
| |
|
||||| ||||| ||||| | |||| ||||||| ||||| | |||||||||||||||||| ||||| || |||||||| |||| ||||||||||||||| |
|
|
| T |
12949296 |
catgagattcttattccaactatagaagagtgctcagtttcccctttttaggattggacttttttgttcattggaatcatcaaatgaaagaatgaatatt |
12949395 |
T |
|
| Q |
300 |
gtggatgtcactagagagctta |
321 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
12949396 |
gtggatgtcactagagagctta |
12949417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 179; Significance: 2e-96; HSPs: 21)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 11 - 337
Target Start/End: Original strand, 10581504 - 10581830
Alignment:
| Q |
11 |
tggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgcataacttt |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || | | ||||||||||||||||||||||||||||||| |
|
|
| T |
10581504 |
tggtgacatgtatagctttggaatccttatgttggaaatgcttaccggtagaagacccactgatcacgcttttgaagatggtcaaaatctgcataacttt |
10581603 |
T |
|
| Q |
111 |
gttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaattgtgagaatc |
210 |
Q |
| |
|
|||||||| |||||||||| ||||||||| | |||||||||| || |||| ||||||| || | |||||||| ||| ||||||| |||| |||||||| |
|
|
| T |
10581604 |
gttgcaatatcatttcctgctaatcttaagaaaattttggacccacatcttttatcaagggacgcagaagtagaaatggaagatggaaatcttgagaatc |
10581703 |
T |
|
| Q |
211 |
ttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgtcac |
310 |
Q |
| |
|
||| |||| || | ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| ||||||||| |||||| |
|
|
| T |
10581704 |
ttattccagctgcaaaggagtgcttagtttcactttttaggattggacttatgtgttcaatggagtcaccaaaagaaagactgaatattgaggatgtatg |
10581803 |
T |
|
| Q |
311 |
tagagagcttagcataatcagaaaggc |
337 |
Q |
| |
|
|| ||||||||| |||||||||||||| |
|
|
| T |
10581804 |
tatagagcttagtataatcagaaaggc |
10581830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 11 - 321
Target Start/End: Original strand, 10605261 - 10605571
Alignment:
| Q |
11 |
tggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgcataacttt |
110 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||| || ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
10605261 |
tggtgacatgtatagctttggaatcctgatgttggaaatacttactggtaggagacccactgatgaagtttttcaagatggtcaaaatctgcataacttt |
10605360 |
T |
|
| Q |
111 |
gttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaattgtgagaatc |
210 |
Q |
| |
|
||||||| |||||||||||||||| ||||| ||||||||||| || ||| || |||||||||||||||||||||||||| ||| ||| | ||||| |
|
|
| T |
10605361 |
gttgcaacttcatttcctgataatattaaagagattttggacccacaccttgtaacaagagatgtagaagtagcaatagaaaatggaaaccatacgaatc |
10605460 |
T |
|
| Q |
211 |
ttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgtcac |
310 |
Q |
| |
|
||| |||||| |||||||| | |||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| || |
|
|
| T |
10605461 |
ttattccaagggtagaggaatccttagtttcactttttagaattggacttatttgttcaatggaatcaccgaaagaaagaatgaatattatggatgttac |
10605560 |
T |
|
| Q |
311 |
tagagagctta |
321 |
Q |
| |
|
|| |||||||| |
|
|
| T |
10605561 |
taaagagctta |
10605571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 3 - 337
Target Start/End: Complemental strand, 10746731 - 10746406
Alignment:
| Q |
3 |
tccacttatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgc |
102 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||| ||||||| ||||| |||||||||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
10746731 |
tccacatatggtgatatgtatagctttggaatccttatgctggaaatgcttactggtagaagacccactgatgaagtttttgaagatggtcaaaatctgc |
10746632 |
T |
|
| Q |
103 |
ataactttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaattg |
202 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||| || || ||||||| | |||| ||||||||||| ||| ||||||||| ||| |
|
|
| T |
10746631 |
ataactttgttgcaatatcgtttcctgataatcttataaatatcttggacccgcatcttctatcaagagat---------gcagtagaagatggaaacaa |
10746541 |
T |
|
| Q |
203 |
tgagaatcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtg |
302 |
Q |
| |
|
||||||||||| ||||| |||| | ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
10746540 |
tgagaatcttattccaactgtaaaagagtgtttagtttcactttttaggattggacttatttgtacaattgaatcaccaaaagaaagaatgaatactgtg |
10746441 |
T |
|
| Q |
303 |
gatgtcactagagagcttagcataatcagaaaggc |
337 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||| |
|
|
| T |
10746440 |
gatgtcactagagagctcaacataatcagaaaggc |
10746406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 10565502 - 10565838
Alignment:
| Q |
1 |
tatccacttatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatct |
100 |
Q |
| |
|
||||||| | |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||| || || | | ||||||||||||||||||||| |
|
|
| T |
10565502 |
tatccacatgtggtgatatgtatagctttggaatctttatgttggaaatgcttaccggtagaagacccactgatcacgcttttgaagatggtcaaaatct |
10565601 |
T |
|
| Q |
101 |
gcataactttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaat |
200 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||||| | ||||||||||| || |||| |||||| |||| |||||| | ||| |||||| |||| |
|
|
| T |
10565602 |
gcataactttgttgcaatatcatttcctggtaatcttaagaagattttggacccacatcttttatcaatggatgcagaagttgaaatgaaagatggaaat |
10565701 |
T |
|
| Q |
201 |
tgtgagaatcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattg |
300 |
Q |
| |
|
||||||||||| |||| || | ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| || |||| |
|
|
| T |
10565702 |
catgagaatcttattccacctgcaaaggagtgcttagtttcactttttaggattggacttatgtgttcaatggagtcaccaaaagaaagaatcaacattg |
10565801 |
T |
|
| Q |
301 |
tggatgtcactagagagcttagcataatcagaaaggc |
337 |
Q |
| |
|
|| ||| |||||||||||| |||||||||||||| |
|
|
| T |
10565802 |
aggttgtatgtagagagcttagtataatcagaaaggc |
10565838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 10612209 - 10612529
Alignment:
| Q |
1 |
tatccacttatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatct |
100 |
Q |
| |
|
||||||| | |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| || |||| | |||||||||| ||||||||| |
|
|
| T |
10612209 |
tatccacatgtggtgatatgtatagctttggaatccttatgttggaaatgcttaccggtagaagacccactgatgaggcatttgaagatgatcaaaatct |
10612308 |
T |
|
| Q |
101 |
gcataactttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaat |
200 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||| || ||| ||||||| || |||| | |||| | ||| |||||||| |||| |||||| ||| |
|
|
| T |
10612309 |
acataactttgttgcaacactgtttcctgctaatcttataaagatcttggacccacatcttgtgtcaaaatatgcagaagtagaaatacaagatggaaag |
10612408 |
T |
|
| Q |
201 |
tgtgagaatcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattg |
300 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
10612409 |
agtgagaatcttattccaagtttaaaggagtgcttagtttcactttttaggattggacttctttgttcaatggaatcacccaaagaaagaatgaatattg |
10612508 |
T |
|
| Q |
301 |
tggatgtcactagagagctta |
321 |
Q |
| |
|
||||||| |||||||| |||| |
|
|
| T |
10612509 |
tggatgttactagagaactta |
10612529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 11 - 337
Target Start/End: Complemental strand, 10740126 - 10739800
Alignment:
| Q |
11 |
tggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgcataacttt |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
10740126 |
tggtgacatgtatagctttggaatccttatgttggaaatacttaccggtagaagacccactgatgaagtttttcaagatggtcaaaatctacataacttt |
10740027 |
T |
|
| Q |
111 |
gttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaattgtgagaatc |
210 |
Q |
| |
|
|| |||| ||| ||||||| ||| ||| | ||||||||||| || |||| | ||||||||||||||||| ||||| |||||| ||| | | || || |
|
|
| T |
10740026 |
gtagcaacttcgtttcctggtaacattatagagattttggacccacatcttgaagcaagagatgtagaagtaacaatacaagatggaaaccgagcgattc |
10739927 |
T |
|
| Q |
211 |
ttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgtcac |
310 |
Q |
| |
|
| ||| | |||||||| | |||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | |
|
|
| T |
10739926 |
tagttcctggggtagaggaatccttagtttcactttttagaattggacttatttgttcaatggaatcaccgaaagaaagaatgaatattatggatgttaa |
10739827 |
T |
|
| Q |
311 |
tagagagcttagcataatcagaaaggc |
337 |
Q |
| |
|
| |||||||| || |||| ||||||| |
|
|
| T |
10739826 |
tcaagagcttaacacaatccgaaaggc |
10739800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 11 - 335
Target Start/End: Complemental strand, 10716677 - 10716365
Alignment:
| Q |
11 |
tggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgcataacttt |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
10716677 |
tggtgacatgtatagctttggaatccttatgttggaaatgcttaccggtagaagacccactgatgaattttttcaagatggtcaaaatctgcataacttt |
10716578 |
T |
|
| Q |
111 |
gttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaattgtgagaatc |
210 |
Q |
| |
|
|||||| |||||||||||| ||||||| || ||||||||| | || |||| |||||||||||| ||||| || |||| | ||||||| |
|
|
| T |
10716577 |
gttgcatcttcatttcctgacaatcttataaagattttggatccacatcttgtatcaagagatgcagaag-----atggaagcata-------gagaatc |
10716490 |
T |
|
| Q |
211 |
ttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgtcac |
310 |
Q |
| |
|
||| ||| ||| | || ||||||||||| ||||| |||||||||||| ||||||||||||||||||| | |||||||||||||||| |||||||||| |
|
|
| T |
10716489 |
ttattcctgcggtaaatgaatgcttagtttctcttttcaggattggacttgtttgtacaatggaatcaccgatagaaagaatgaatattatggatgtcac |
10716390 |
T |
|
| Q |
311 |
tagagagcttagcataatcagaaag |
335 |
Q |
| |
|
||||||||| | ||||||||||||| |
|
|
| T |
10716389 |
tagagagctcaacataatcagaaag |
10716365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 11 - 321
Target Start/End: Complemental strand, 10762541 - 10762231
Alignment:
| Q |
11 |
tggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgcataacttt |
110 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||| ||||| |||||||||||| || ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
10762541 |
tggtgacatgtatagctttggagtccttatgttgaaaatacttactggtagaagacccactgatgaagtttttcaagatggtcaaaatctgcataacttt |
10762442 |
T |
|
| Q |
111 |
gttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaattgtgagaatc |
210 |
Q |
| |
|
|| ||| ||||||||||| ||| ||| | |||||||||| || |||| | ||||||||||||||||| ||| | |||||| ||| | | || || |
|
|
| T |
10762441 |
gtagcagcttcatttcctggtaacattatagatattttggacccacatcttgaagcaagagatgtagaagtaacaaaacaagatggaaaccgagcgattc |
10762342 |
T |
|
| Q |
211 |
ttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgtcac |
310 |
Q |
| |
|
||| | || | |||||||| | |||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| || |
|
|
| T |
10762341 |
ttattgcaggggtagaggaatccttagtttcactttttagaattggacttatttgttcaatggaatcaccgaaagaaagaatgaatattatggatgttac |
10762242 |
T |
|
| Q |
311 |
tagagagctta |
321 |
Q |
| |
|
| |||||||| |
|
|
| T |
10762241 |
tcaagagctta |
10762231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 11048362 - 11048241
Alignment:
| Q |
11 |
tggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgcataacttt |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11048362 |
tggtgacatgtatagctttggaatccttatgttggaaatgcttaccggtagaagacccacccatgaagtttttgaagatggtcaaaatctgcataacttt |
11048263 |
T |
|
| Q |
111 |
gttgcaatttcatttcctgata |
132 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
11048262 |
gttgcaatttcacttcctgata |
11048241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 10651913 - 10651619
Alignment:
| Q |
1 |
tatccacttatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatct |
100 |
Q |
| |
|
||||||| |||||||||||||||||||| || | |||||||||||||| |||||||| |||||||| | ||| | | |||||||| ||||||||| | |
|
|
| T |
10651913 |
tatccacatatggtgacatgtatagcttcggggtgcttatgttggaaatgcttaccggaagaagaccaacagatggaatgtttgaagaaggtcaaaattt |
10651814 |
T |
|
| Q |
101 |
gcataactttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaat |
200 |
Q |
| |
|
||||| ||||||| ||||||||||||| ||||| ||| | ||||||||| | || |||| || ||||| ||| ||||| || ||||||||| | ||| |
|
|
| T |
10651813 |
gcatatgtttgttggaatttcatttcctaataatattatacagattttggatccacatcttgtaccaagaaatgaagaagaagaaatagaagaaggaaac |
10651714 |
T |
|
| Q |
201 |
tgtgagaatcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaa |
295 |
Q |
| |
|
|||| ||| | | ||||| ||||||| |||| |||||||||||||| |||||||||||| |||| || || |||||||||||||||||||||| |
|
|
| T |
10651713 |
tgtggaaatttcactccaactgtagagaagtgtttagtttcacttttcaggattggacttgcttgttcagtgaaatcaccaaaagaaagaatgaa |
10651619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 9 - 330
Target Start/End: Original strand, 7193513 - 7193834
Alignment:
| Q |
9 |
tatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgcataact |
108 |
Q |
| |
|
|||||||| ||||||||||| || || ||| ||||||||||||||||||| || ||||| | ||||| | ||||| ||||||||||||| | || | |
|
|
| T |
7193513 |
tatggtgatatgtatagcttcgggatgcttttgttggaaattcttaccggaaggagaccggtagatgaaatgtttgacaatggtcaaaatctacgtattt |
7193612 |
T |
|
| Q |
109 |
ttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaattgtgagaa |
208 |
Q |
| |
|
|||||| |||||| || ||| ||||||||| | |||||||||| | |||| || ||||| || |||||| | |||||||||||| ||| ||| || |
|
|
| T |
7193613 |
ttgttgaaatttcgttgcctaataatcttatacatattttggacccaaatcttgtaccaagaaatatagaagcaacaatagaagatggaaacagtggaaa |
7193712 |
T |
|
| Q |
209 |
tcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgtc |
308 |
Q |
| |
|
| | | ||||| ||||||| ||||| |||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
7193713 |
tttcactccaaatgtagagaagtgcgtagtttcactttttaggattggacttgcttgttcagtggaatcaccaaaagaaagaatgaatatagtggatgtc |
7193812 |
T |
|
| Q |
309 |
actagagagcttagcataatca |
330 |
Q |
| |
|
| ||||| | |||||||||| |
|
|
| T |
7193813 |
atcagagacttaagcataatca |
7193834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 10659796 - 10659458
Alignment:
| Q |
1 |
tatccacttatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatct |
100 |
Q |
| |
|
||||||| ||||||||||||||||||| || | ||| |||||||||| |||||||| |||||||| | ||||| | |||||||| ||||||||||| |
|
|
| T |
10659796 |
tatccacacatggtgacatgtatagcttcggggtgcttctgttggaaatgcttaccggaagaagaccaacggatgaaatgtttgaagagggtcaaaatct |
10659697 |
T |
|
| Q |
101 |
gcataactttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaat |
200 |
Q |
| |
|
||||| ||||||| |||||||||||| ||||| || | ||||||||||| || |||| || ||||| ||| ||||| ||||||||| | ||| |
|
|
| T |
10659696 |
gcatatatttgttgaaatttcatttccaaataatattttacagattttggacccacatcttgtaccaagaaatgaagaagccaaaatagaagaaggaaag |
10659597 |
T |
|
| Q |
201 |
tgtgagaatcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattg |
300 |
Q |
| |
|
||| ||| | ||||| |||||| |||||||||||||||||||| ||||||||||| ||| || || ||||||||||||||||||||||||| | |
|
|
| T |
10659596 |
agtggaaatttccctccaatcgtagagaagtgcttagtttcactttttcggattggacttgcatgttcagtgaaatcaccaaaagaaagaatgaatatag |
10659497 |
T |
|
| Q |
301 |
tggatgtcactagagagcttagcataatcagaaaggcat |
339 |
Q |
| |
|
| |||||||| |||||| | |||||||||| |||||||| |
|
|
| T |
10659496 |
ttgatgtcaccagagagttaagcataatcaaaaaggcat |
10659458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 9827662 - 9827352
Alignment:
| Q |
9 |
tatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgcataact |
108 |
Q |
| |
|
||||||||||||||||||||||| || || |||||||||| |||| || |||||||| | ||||| ||||| |||||||||||||| | || | |
|
|
| T |
9827662 |
tatggtgacatgtatagctttgggatgctcgtgttggaaatgattactggaagaagacctacagatgaaagatttgaggatggtcaaaatctacgtacgt |
9827563 |
T |
|
| Q |
109 |
ttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaattgtgagaa |
208 |
Q |
| |
|
||| || || |||||| ||||||||||| | ||||||| ||| || | || || ||||||||| ||||| |||||||||||||| |||| ||||||| |
|
|
| T |
9827562 |
ttgctgaaagttcattagctgataatctttcacagattttgaaccaacattttgtaccaagagatgaagaagcagcaatagaagatggaaatagtgagaa |
9827463 |
T |
|
| Q |
209 |
tcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgtc |
308 |
Q |
| |
|
||||| |||| |||| || | |||||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||||| || || ||||| |
|
|
| T |
9827462 |
tcttattccagctgtaaagaattgcttagtttcagttttaaggattggacttgcctgttcaagagaatcaccaaaagaaagaatgaacatagtagatgtt |
9827363 |
T |
|
| Q |
309 |
actagagagct |
319 |
Q |
| |
|
||||||||||| |
|
|
| T |
9827362 |
actagagagct |
9827352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 9836031 - 9835721
Alignment:
| Q |
9 |
tatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgcataact |
108 |
Q |
| |
|
||||||||||||||||||||||| || || |||||||||| |||| || |||||||| | ||||| ||||| |||||||||||||| | || | |
|
|
| T |
9836031 |
tatggtgacatgtatagctttgggatgctcgtgttggaaatgattactggaagaagacctacagatgaaagatttgaggatggtcaaaatctacgtacgt |
9835932 |
T |
|
| Q |
109 |
ttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaattgtgagaa |
208 |
Q |
| |
|
||| || || |||||| ||| ||||||| | ||||||||||| || | || || ||||||||| ||||| |||||||||||||| |||| ||||||| |
|
|
| T |
9835931 |
ttgctgaaagttcattagctggtaatctttcacagattttggaccaacattttgtaccaagagatgaagaagcagcaatagaagatggaaatagtgagaa |
9835832 |
T |
|
| Q |
209 |
tcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgtc |
308 |
Q |
| |
|
||||| |||| |||| || | |||||||||||| |||| |||||||||||| ||| ||| ||||||||||||||||||||||| || || ||||| |
|
|
| T |
9835831 |
tcttattccagctgtaaagaattgcttagtttcagttttaaggattggacttgcctgttcaagagaatcaccaaaagaaagaatgaacatagtagatgtt |
9835732 |
T |
|
| Q |
309 |
actagagagct |
319 |
Q |
| |
|
||||||||||| |
|
|
| T |
9835731 |
actagagagct |
9835721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 10588170 - 10587895
Alignment:
| Q |
1 |
tatccacttatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatct |
100 |
Q |
| |
|
||||||| | ||||||||||||||||||||| || |||||||||||||| | ||||| ||||||||| | ||||| | |||||||||||||||||||| |
|
|
| T |
10588170 |
tatccacatctggtgacatgtatagctttgggatgcttatgttggaaatgatcaccggaagaagacccacagatgaaatgtttgaagatggtcaaaatct |
10588071 |
T |
|
| Q |
101 |
gcataactttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaat |
200 |
Q |
| |
|
|||| ||||||| || |||||||| |||||||||| | ||||||||||| || |||| || |||||||||||| | || |
|
|
| T |
10588070 |
acatatgtttgttgaaagttcatttcaagataatcttatacagattttggacccacatctt------------------gtttcaatagaagatggacat |
10587989 |
T |
|
| Q |
201 |
tgtgagaatcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatga |
294 |
Q |
| |
|
||||||||||| |||| | ||| ||||||||||||||||| | |||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
10587988 |
aatgagaatcttattccagctaaggagaagtgcttagtttcacttctaaggattggacttgcttgttcaatggaatcaccaaaagaaagaatga |
10587895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 10760892 - 10760796
Alignment:
| Q |
158 |
tcttatatcaagagatgtagaagtagcaatagaagatgaaaattgtgagaatcttaatccaagtgtagaggagtgcttagtttcactttttaggatt |
254 |
Q |
| |
|
|||| |||||||||||||| |||||| |||| |||||| ||| || |||||||| ||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
10760892 |
tcttgtatcaagagatgtaaaagtagaaatacaagatggaaacaatgggaatcttattccaagtgtagagaagtgcttagtttcactgtttaggatt |
10760796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 336
Target Start/End: Original strand, 10559406 - 10559732
Alignment:
| Q |
10 |
atggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgcataactt |
109 |
Q |
| |
|
|||||||||||||||||||||| || ||||| |||||||| |||| || |||||||| || ||||| | ||| ||||||||||||||||||| | |
|
|
| T |
10559406 |
atggtgacatgtatagctttgggatgcttatattggaaatgattacaggaagaagaccaactgatgaaatgtttttagatggtcaaaatctgcatttgta |
10559505 |
T |
|
| Q |
110 |
tgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaattgtgagaat |
209 |
Q |
| |
|
||||| || |||||||||| ||||| ||| ||||||||||| || | || || ||||||| | |||| ||||||||||||| || ||||| |
|
|
| T |
10559506 |
tgttgaaaattcatttcctaataatgttatgcagattttggacccacatattgtaccaagagaagaggaagcagcaatagaagatagaagcaagaagaat |
10559605 |
T |
|
| Q |
210 |
cttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgtca |
309 |
Q |
| |
|
|||| | || || | | | |||||||||||| ||||||||||||||| ||| | ||||||| |||| | ||||||||||||| ||||||||| |
|
|
| T |
10559606 |
cttatttcattaatacataaatccttagtttcactctttaggattggacttgcatgttcggtggaatcgccaacacaaagaatgaatatattggatgtca |
10559705 |
T |
|
| Q |
310 |
ctagagagcttagcataatcagaaagg |
336 |
Q |
| |
|
||||||| || | ||| |||||||||| |
|
|
| T |
10559706 |
ctagagaactaaacatgatcagaaagg |
10559732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 335
Target Start/End: Complemental strand, 19605568 - 19605243
Alignment:
| Q |
10 |
atggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatctgcataactt |
109 |
Q |
| |
|
||||||| |||||||||||||| || ||||| |||||||| ||||| || |||||||| | |||| | ||| ||||||||||||||||| | | |
|
|
| T |
19605568 |
atggtgatatgtatagctttgggatgcttatattggaaatgcttacgggaagaagaccgacggatgacatgtttacagatggtcaaaatctgcgtttgta |
19605469 |
T |
|
| Q |
110 |
tgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaattgtgagaat |
209 |
Q |
| |
|
||||| |||||||||||||||||| ||| | ||||||||||| || || || |||||| || ||||| | ||||||| |||| || | | || |
|
|
| T |
19605468 |
tgttgaaatttcatttcctgataacattatgaagattttggacccgtgtattgtaccaagagttgaagaagcaacaatagatgatggaagcaatcggcat |
19605369 |
T |
|
| Q |
210 |
cttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgtca |
309 |
Q |
| |
|
|||| | ||| | || | ||||| ||||| ||||||||||||||||| ||| | |||||||| || ||||||||||||||||| | |||| || |
|
|
| T |
19605368 |
cttatttcaacgatggataaatgctttgtttccatttttaggattggacttgcctgttcgatggaatctcccaaagaaagaatgaatatagaagatgcca |
19605269 |
T |
|
| Q |
310 |
ctagagagcttagcataatcagaaag |
335 |
Q |
| |
|
|||||||||| | ||||||||||||| |
|
|
| T |
19605268 |
ctagagagctaaacataatcagaaag |
19605243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 307
Target Start/End: Original strand, 10551520 - 10551606
Alignment:
| Q |
221 |
tgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgt |
307 |
Q |
| |
|
||||||| | || ||| |||||||| ||||||||| |||| |||| || |||||||||||||||||||||||||||| || ||||| |
|
|
| T |
10551520 |
tgtagagaaatgtttactttcacttcttaggattgcactttcttgttcagtggaatcaccaaaagaaagaatgaatatggttgatgt |
10551606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 9825552 - 9825604
Alignment:
| Q |
3 |
tccacttatggtgacatgtatagctttggaatccttatgttggaaattcttac |
55 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | ||| |||||||| ||||| |
|
|
| T |
9825552 |
tccacttatggtgacatgtatagctttggaattcctatattggaaatgcttac |
9825604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 9849680 - 9849623
Alignment:
| Q |
277 |
caccaaaagaaagaatgaatattgtggatgtcactagagagcttagcataatcagaaa |
334 |
Q |
| |
|
|||| |||| ||||||||||| ||||||||||||||||||| | |||||||||||| |
|
|
| T |
9849680 |
caccgaaagcaagaatgaatacaatggatgtcactagagagctaaacataatcagaaa |
9849623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 17923128 - 17922808
Alignment:
| Q |
1 |
tatccacttatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||| | ||||| ||||| |||| ||||||||||| |
|
|
| T |
17923128 |
tatccacttatggtgacatgtatagctttggaatccttatgctggaaatgcttaccggaagaagacccaccgatgaactttttaaagacggtcaaaatct |
17923029 |
T |
|
| Q |
101 |
gcataactttgttgcaatttcatttcctgataatcttaaaacgattttggaccgacgtcttatatcaagagatgtagaagtagcaatagaagatgaaaat |
200 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||| || ||||||||| | || |||| || |||||| || ||| | |||| |||||||| |||| |
|
|
| T |
17923028 |
acataactttgttacaatttcatttccttgcaatcttataaagattttggatccacatcttttaccaagagctgaagatggagcacgagaagatggaaat |
17922929 |
T |
|
| Q |
201 |
tgtgagaatcttaatccaagtgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattg |
300 |
Q |
| |
|
||||| |||| ||||| ||||||||||||||||||||| |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
17922928 |
catgagattcttcttccaactgtagaggagtgcttagtttccctttttaggattggacttttttgttcattggaatcaccaaaagaaagaatgaatattg |
17922829 |
T |
|
| Q |
301 |
tggatgtcactagagagctta |
321 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
17922828 |
tggatgtcactagagagctta |
17922808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 7771 - 7921
Alignment:
| Q |
1 |
tatccacttatggtgacatgtatagctttggaatccttatgttggaaattcttaccggtagaagacccgctaatgaagtttttgaagatggtcaaaatct |
100 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
7771 |
tatccacatgtggtgacatgtatagctttggaatccttatgctggaaatgcttactggtagaagacccactgatgaactttttgaagatggtcaaaatct |
7870 |
T |
|
| Q |
101 |
gcataactttgttgcaatttcatttcctgataatcttaaaacgattttgga |
151 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| || ||||||||| |
|
|
| T |
7871 |
gcataactttgttacaatttcatttcctgataatcttataaagattttgga |
7921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 321
Target Start/End: Complemental strand, 31466648 - 31466548
Alignment:
| Q |
221 |
tgtagaggagtgcttagtttcactttttaggattggacttatttgtacaatggaatcaccaaaagaaagaatgaatattgtggatgtcactagagagctt |
320 |
Q |
| |
|
||||||| | || ||| ||||||||||||| |||| |||| |||| |||||||||||||||||||||| |||| ||| || || |||| |||||||||| |
|
|
| T |
31466648 |
tgtagagaaatgtttaatttcactttttagtattgcacttggttgttcaatggaatcaccaaaagaaaggatgagtatggttgaagtcattagagagctt |
31466549 |
T |
|
| Q |
321 |
a |
321 |
Q |
| |
|
| |
|
|
| T |
31466548 |
a |
31466548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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