View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13808_low_12 (Length: 502)
Name: NF13808_low_12
Description: NF13808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13808_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 464; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 1 - 495
Target Start/End: Original strand, 3464559 - 3465054
Alignment:
| Q |
1 |
ctcagcaatgtggccgcaattatgattgtgatagagagagacatctaaaatcattatatttcaaccgcaattactacaaatgttcggcttgattagactt |
100 |
Q |
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| T |
3464559 |
ctcagcaatgtggccgcaattatgattgttatagagagagacatctaaaatcattatatttcaaccgcaattactacaaatgttcggcttgattagactt |
3464658 |
T |
|
| Q |
101 |
ttttcatgtaaaacttacatcatatgtacattttgtttataggttttcaacatggttttaaattgtcatttataaatcgcgacatagaagttttcgaaat |
200 |
Q |
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| T |
3464659 |
ttttcatgtaaaacttacatcatatgtacattttgtttataggttttcaacatggttttaaattgtcatttaagaatcgcgacatagaagttttcgaaat |
3464758 |
T |
|
| Q |
201 |
tttcacaaccttatcgcaaccgcaatcaaactatattagtcgcatcacaatttgaaacctcggtaaagagatatacaaaattattcatacaccc-tttga |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
3464759 |
tttcacaaccttatcgcaaccgcaatcaaactatattagtcacatcacaatttgaaacctcggtaaagagatatacaaaattattcatacacccttttga |
3464858 |
T |
|
| Q |
300 |
aaacaatgacaaaagacaaacagaaagattcaagaacaaaatgtgatacctaatgaatctgaacatgtagtagcagattagtgctctagaattgaaagag |
399 |
Q |
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|||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3464859 |
aaacaatgacaaaagataaacagaaagattcaagaagaaaatgtgatacctaatgaatctgaacatgtagtagcagattagtgctctagaattgaaagag |
3464958 |
T |
|
| Q |
400 |
aagaaacaagcacaatccagggctccaaaaagaattgaggaggccccagagaaaggcagtatgaggaggatgatgatgaaatgaaaggtgatgatg |
495 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3464959 |
aagaaacaagcacaatccagggctccaaaaagaattgaggaggccccagagaaaggcagtatgaggaggatgatgatgaaatgaaaggtgatgatg |
3465054 |
T |
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