View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13808_low_37 (Length: 296)
Name: NF13808_low_37
Description: NF13808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13808_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 19 - 284
Target Start/End: Original strand, 3529699 - 3529964
Alignment:
| Q |
19 |
cccttcttaggtcaaatgtctgccacacacctcatcagtcagttgtaaacaaaataataattaaattgtgacttagctatgataatattatttacaaaca |
118 |
Q |
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| T |
3529699 |
cccttcttaggtcaaatgtctgccacacacctcatcagtcagttgtaaacaaaataataattaaattgtgacttagctatgataatattatttacaaaca |
3529798 |
T |
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| Q |
119 |
accatacaataagaaaacgacgacaaatcaaataaaaatgtttgatatttccaattgcaataaatgatgttgaagactaatttaccaataatttcccttt |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
3529799 |
accatacaataagaaaacgacgacaaatcaaataaaaatgtttgatatttccaattgcaataagtgatgttgaagactaatttaccaataatttcccttt |
3529898 |
T |
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| Q |
219 |
tgcaacatcttctaatctcacatgtcaactacgttatggtgatctaaatctctaattttgccttca |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3529899 |
tgcaacatcttctaatctcacatgtcaactacgttatggtgatctaaatctctaattttgccttca |
3529964 |
T |
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