View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13808_low_4 (Length: 657)

Name: NF13808_low_4
Description: NF13808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13808_low_4
NF13808_low_4
[»] chr4 (26 HSPs)
chr4 (19-414)||(553149-553545)
chr4 (409-577)||(552679-552847)
chr4 (115-281)||(55505234-55505400)
chr4 (130-277)||(640723-640870)
chr4 (596-656)||(552563-552623)
chr4 (44-387)||(546611-546954)
chr4 (22-210)||(55908764-55908952)
chr4 (19-222)||(1524519-1524719)
chr4 (19-215)||(1545643-1545839)
chr4 (19-180)||(558403-558564)
chr4 (482-543)||(546489-546550)
chr4 (19-180)||(570256-570417)
chr4 (19-92)||(1548457-1548530)
chr4 (19-92)||(8187124-8187197)
chr4 (117-180)||(644736-644799)
chr4 (117-180)||(12121588-12121651)
chr4 (19-180)||(7225916-7226077)
chr4 (19-199)||(8184063-8184243)
chr4 (18-98)||(7307847-7307927)
chr4 (33-95)||(370910-370972)
chr4 (116-201)||(566073-566158)
chr4 (19-95)||(1513440-1513516)
chr4 (18-98)||(3438598-3438677)
chr4 (130-201)||(370803-370875)
chr4 (185-281)||(1600335-1600431)
chr4 (116-164)||(53761899-53761947)
[»] chr3 (7 HSPs)
chr3 (23-274)||(51113818-51114069)
chr3 (33-253)||(514775-514995)
chr3 (116-221)||(51121023-51121128)
chr3 (23-162)||(51764477-51764616)
chr3 (598-651)||(51114421-51114477)
chr3 (122-180)||(1657156-1657214)
chr3 (19-93)||(51120926-51121000)
[»] chr8 (8 HSPs)
chr8 (22-339)||(32151044-32151364)
chr8 (19-164)||(18315306-18315451)
chr8 (19-213)||(27922380-27922574)
chr8 (19-180)||(21235463-21235624)
chr8 (60-174)||(44736446-44736560)
chr8 (142-251)||(5767811-5767920)
chr8 (19-95)||(17628047-17628123)
chr8 (23-95)||(34936200-34936272)
[»] chr6 (15 HSPs)
chr6 (19-201)||(28934933-28935115)
chr6 (40-173)||(6603256-6603389)
chr6 (19-162)||(6432084-6432227)
chr6 (19-184)||(6394765-6394930)
chr6 (18-95)||(6585269-6585346)
chr6 (23-180)||(11936312-11936469)
chr6 (23-180)||(11948292-11948449)
chr6 (130-173)||(10579881-10579924)
chr6 (19-95)||(6409996-6410072)
chr6 (109-173)||(14820605-14820669)
chr6 (19-173)||(7994215-7994369)
chr6 (137-172)||(12102219-12102254)
chr6 (130-171)||(6415880-6415921)
chr6 (134-170)||(6597040-6597076)
chr6 (116-276)||(9411164-9411324)
[»] chr2 (4 HSPs)
chr2 (22-210)||(1037700-1037888)
chr2 (40-180)||(45245139-45245279)
chr2 (19-98)||(32785805-32785884)
chr2 (124-201)||(44575633-44575710)
[»] chr5 (5 HSPs)
chr5 (19-155)||(41901568-41901704)
chr5 (18-173)||(32267387-32267542)
chr5 (107-157)||(17205527-17205577)
chr5 (19-149)||(41889587-41889717)
chr5 (127-171)||(20478223-20478267)
[»] scaffold0295 (1 HSPs)
scaffold0295 (22-203)||(660-841)
[»] chr1 (4 HSPs)
chr1 (19-158)||(7554415-7554554)
chr1 (117-201)||(9580953-9581037)
chr1 (141-215)||(9586509-9586583)
chr1 (19-170)||(19468532-19468683)
[»] scaffold0041 (1 HSPs)
scaffold0041 (19-92)||(39177-39250)
[»] chr7 (3 HSPs)
chr7 (107-164)||(10170202-10170259)
chr7 (107-164)||(10177727-10177784)
chr7 (116-157)||(10614521-10614562)


Alignment Details
Target: chr4 (Bit Score: 381; Significance: 0; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 19 - 414
Target Start/End: Complemental strand, 553545 - 553149
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  553545 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 553446  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgcctc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  553445 tcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgcctc 553346  T
Q  219 aatggtacattcacggacatcattaagaaagataggagctccacctggttttgatttgagtgatacagagaaactcttcttgcaccatggatgctatgtt 318  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  553345 aatggtacattcacggacatcattgagaaagataggagctccacctggttttgatttgagtgatacggagaaactcttcttgcaccatggatgctatgtt 553246  T
Q  319 tcgtagtagtttgaaactgctttgttggagtataaactccgaaatgtaagttctttattgttttcagatgagaaattaatttc-ttttataaatatg 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  553245 tcgtagtagtttgaaactgctttgttggagtataaactccgaaatgtaagttctttattgttttcagatgagaaattaatttctttttataaatatg 553149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 409 - 577
Target Start/End: Complemental strand, 552847 - 552679
Alignment:
Q  409 aatatgcattaggggtttattaaacccttttcttctattttatgcaaatttttgtttgttctacgatatatgtaagagaataagagatagtgtagacctg 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  552847 aatatgcattaggggtttattaaacccttttcttctattttatgcaaatttttgtttgttctacgatatatgtaagagaataagagatagtgtagacctg 552748  T
Q  509 catgtgatttgaaatccccaacatcatttactgaactgaactaattaattcaccactcaattatatcaa 577  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  552747 catgtgatttgaaatccccaacatcatttactgaactgaactaattaattcaccactcaattatatcaa 552679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 115 - 281
Target Start/End: Original strand, 55505234 - 55505400
Alignment:
Q  115 gatgtcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttg 214  Q
    ||||||||||| || |||||||| || ||| ||||||||||||||||||| ||||||||| | |||   |||||||||||||||||| | | ||||||||    
T  55505234 gatgtcacagagaagggagtgaaacacgtgttagaaaactgcacacaactaagagagatcaacttgaacggttgtgataaagtgcatactagtgttgttg 55505333  T
Q  215 cctcaatggtacattcacggacatcattaagaaagataggagctccacctggttttgatttgagtga 281  Q
     ||||||||||  |||| || ||||||| |||||||||  ||| |||||||||||| ||||||||||    
T  55505334 actcaatggtattttcaaggccatcattgagaaagataacagcgccacctggttttcatttgagtga 55505400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 130 - 277
Target Start/End: Complemental strand, 640870 - 640723
Alignment:
Q  130 ggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgcctcaatggtacatt 229  Q
    |||||||||||||||||||||||||||| | || | |||||| || ||||   ||||||| |||||||| |||| ||||| |||| ||||||||||  ||    
T  640870 ggagtgaatcatgtggtagaaaactgcaaagaattaagagaggtcaatttaaagggttgtaataaagtgaatgctaatgtcgttgactcaatggtatttt 640771  T
Q  230 cacggacatcattaagaaagataggagctccacctggttttgatttga 277  Q
    || || ||||||| |||||||||| | |||||||||||||||||||||    
T  640770 caaggccatcattgagaaagatagtaactccacctggttttgatttga 640723  T

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Target: chr4; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 596 - 656
Target Start/End: Complemental strand, 552623 - 552563
Alignment:
Q  596 ttctatggtttggtgttaatattattctgcaaatttaattcttgattgtctctttcatttc 656  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  552623 ttctatggtttggtgttaatattattctgcaaatttaattcttgattgtctctttcatttc 552563  T

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Target: chr4; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 44 - 387
Target Start/End: Complemental strand, 546954 - 546611
Alignment:
Q  44 atgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtcacagataaaggagtgaatcatgt 143  Q
    |||||||| ||||  ||||||| ||||||||||||| |||||||||| || ||||  ||    | |||  | |||||||||| || |||||||| |||||    
T  546954 atgatgaaacactctatgtgatctcaaagagttgttgtgggcttttggaattgttactggaagaatgttttcatgtcacagagaagggagtgaaacatgt 546855  T
Q  144 ggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgcctcaatggtacattcacggacatcatta 243  Q
    | |||||||||||||| |||| ||||||||| ||||  ||| |||| |||||||| |||  ||||  ||||| |||||| ||  || | || |||||||     
T  546854 gctagaaaactgcacaaaactaagagagatcaatttaagggcttgtaataaagtgaatgttaatgccgttgcttcaatgttatttttaaggccatcattg 546755  T
Q  244 agaaagataggagctccacctggttttgatttgagtgatacagagaaactcttcttgcaccatggatgctatgtttcgtagtagtttgaaactgctttgt 343  Q
    |||||||||  ||||||| ||||||| ||||||||  | ||||||| | ||||| |||| |  |||   |||| ||  |||  || | |||||||||||     
T  546754 agaaagataatagctccatctggtttggatttgagcaaaacagagagaatcttcctgcatcgaggagattatgcttgctagctgtcttaaactgctttgc 546655  T
Q  344 tggagtataaactccgaaatgtaagttctttattgttttcagat 387  Q
    || ||| ||| |||  ||||||||||| ||||||||||||||||    
T  546654 tgaagtttaatctctaaaatgtaagttgtttattgttttcagat 546611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 22 - 210
Target Start/End: Original strand, 55908764 - 55908952
Alignment:
Q  22 aacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtca 121  Q
    |||||||||  |||| | |||||||||||| ||||  || |||| ||||||| ||||| ||||||||| ||||||||  ||    |||||  ||| ||||    
T  55908764 aacttgtcacatacatgtgttgatgatgaaacactctatatgatctcaaagaattgttgtgggcttttacaactgtttctggaaaattgtgatgaagtca 55908863  T
Q  122 cagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgtt 210  Q
    |||| || || ||||| ||||| || ||||||||||||||||| |||||  |||||||||||||||||||||| ||| |||| ||||||    
T  55908864 cagagaatggtgtgaaacatgtagtcgaaaactgcacacaactcagagaagtcgatttggggggttgtgataatgtgaatgccaatgtt 55908952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 1524519 - 1524719
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||| ||||||  |||||| |||||||||||| ||||  || |||| ||| ||||||||  |||||||||||||||||| |||  |  ||||    |||    
T  1524519 ttgaatttgtcacgtacaagtgttgatgatgaaacactctatatgatctcacagagttgtcgtgggcttttgcaactgttattgcgtagttgtt---atg 1524615  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgcctc 218  Q
    ||||||| |  ||||||||| ||||| ||||||||||||||||||| ||||||||  ||||| ||||||||  |||||| ||||| |   ||||||||||    
T  1524616 tcacagagaggggagtgaattatgtgatagaaaactgcacacaactgagagagattaatttgaggggttgttgtaaagttcatgctagctttgttgcctc 1524715  T
Q  219 aatg 222  Q
    ||||    
T  1524716 aatg 1524719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 1545839 - 1545643
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgt-agtgat 117  Q
    ||||||||||  ||||||||||||||||||||| ||||| || | ||  |||||| ||||  |    ||||||||||||| ||| | |||||| ||||      
T  1545839 ttgaacttgttgtttacaagagttgatgatgaaacactttatataataacaaagaattgtcatataattttgcaactgttattggtatattgtgagtgc- 1545741  T
Q  118 gtcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgc 215  Q
    |||||| | || ||||||||  ||| |||| |||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| |||||| ||||    
T  1545740 gtcacatagaagggagtgaaagatgcggtaaaaaactgcacacaactaagagtgatcaatttgaggggttgtgataaagtgcatgctaatgttattgc 1545643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 558564 - 558403
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgt-tgttgttttattgtagtgat 117  Q
    |||||||||||||| |||    ||||||||||||||||  ||||||| ||||||||||||  |||||||||| |||||| | ||   || ||||| |       
T  558564 ttgaacttgtcattaacatatattgatgatgaagcactccatgtgatctcaaagagttgtcgtgggcttttggaactgtatcttcaatt-ttgtatttgc 558466  T
Q  118 gtcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttg 180  Q
    || ||||||||||||||||| |||||| ||||||||||||||||| | ||||| ||| |||||    
T  558465 gttacagataaaggagtgaagcatgtgctagaaaactgcacacaaatgagagaaatcaatttg 558403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 482 - 543
Target Start/End: Complemental strand, 546550 - 546489
Alignment:
Q  482 aagagaataagagatagtgtagacctgcatgtgatttgaaatccccaacatcatttactgaa 543  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| || ||||||| |||||    
T  546550 aagagaataagatatagtgtagaccagcatgtgatttgaaatcccgaatatcatttgctgaa 546489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 570417 - 570256
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||||||||||| |||| |||||||| | |||| |||  || |||||||||||||||||   |||||||||||||||||  |     |||||  | |||    
T  570417 ttgaacttgtcatatacaggagttgataacgaagaactctatctgatttcaaagagttgtcgcgggcttttgcaactgttacttgagcattgttattatg 570318  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttg 180  Q
    | ||  | | ||| |||||||||||||||||||||||||||||||| || |||||| |||||    
T  570317 ttactaaaagaggcgtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttg 570256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 1548457 - 1548530
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgca 92  Q
    ||||||||||||  ||||||  ||||||||||| |||| |||||||| ||||||||||||| ||||||||||||    
T  1548457 ttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaagagttgttgtgggcttttgca 1548530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 8187124 - 8187197
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgca 92  Q
    ||||||||||||  |||||||||||||||| || ||||| |||  |||||||||||||||| ||||||||||||    
T  8187124 ttgaacttgtcacatacaagagttgatgataaaacactttatgcaatttcaaagagttgttgtgggcttttgca 8187197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 644799 - 644736
Alignment:
Q  117 tgtcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttg 180  Q
    |||||| || ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||||    
T  644799 tgtcacggagaaaggagtgaaacatgtggttgaaaaatgcacacaactgagagagatcgatttg 644736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 12121588 - 12121651
Alignment:
Q  117 tgtcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttg 180  Q
    ||||||||| |  |||||||| |||||||||||||| ||||||||||| |||||||||||||||    
T  12121588 tgtcacagagatgggagtgaagcatgtggtagaaaaatgcacacaactaagagagatcgatttg 12121651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 7225916 - 7226077
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||||||||||  |||||||||||||||  ||| ||||  |||||| ||||||||||||| ||| ||||||||||| ||  ||     ||||  ||| |    
T  7225916 ttgaacttgtcacatacaagagttgatgacaaaggacttcgtgtgatatcaaagagttgttgtggacttttgcaactattactggaaagttgttttgagg 7226015  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttg 180  Q
    |||| || || ||| |||| || ||||||||||||||||  ||||| ||||||||| |||||    
T  7226016 tcaccgagaagggattgaagcacgtggtagaaaactgcaagcaactgagagagatcaatttg 7226077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 8184063 - 8184243
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||||||||||  ||||||||||||||||  ||||||  |||  || ||||||||||||| |||||||||| |||||||  ||    ||||| |  |||    
T  8184063 ttgaacttgtcacatacaagagttgatgatatagcactctatgcaatctcaaagagttgttgtgggcttttggaactgttactggaaaattgt-gaaatg 8184161  T
Q  119 -tcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgc 199  Q
     |||||||| | |||||||| |||||| ||||||| ||||||||||| | || |||| ||||| ||   |||||||||||||    
T  8184162 atcacagatgagggagtgaagcatgtgctagaaaattgcacacaactgaaagtgatcaatttgaggaactgtgataaagtgc 8184243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 7307927 - 7307847
Alignment:
Q  18 attgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgtt 98  Q
    |||||||||||||| ||||  ||||||||||||||||||   | |||| ||||||||||||| | |||||||||| |||||    
T  7307927 attgaacttgtcatatacagaagttgatgatgaagcactacgtatgatctcaaagagttgttgtaggcttttgcacctgtt 7307847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 370972 - 370910
Alignment:
Q  33 tacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaact 95  Q
    |||||||||  || ||||||||||| ||||||| ||||||||||||| | |||||||||||||    
T  370972 tacaagagtctattatgaagcacttcatgtgatctcaaagagttgttgtcggcttttgcaact 370910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 566158 - 566073
Alignment:
Q  116 atgtcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcat 201  Q
    |||| ||||| || |||||||| ||  |||| ||||||||||||||||| ||||| ||| | |||| ||||||| |||||||||||    
T  566158 atgttacagagaagggagtgaaacacctggtggaaaactgcacacaactgagagaaatcaagttggagggttgttataaagtgcat 566073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 1513440 - 1513516
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaact 95  Q
    |||||||||||||||||||  |||||||||||| ||||  | || || |||||| |||||  |||||||||||||||    
T  1513440 ttgaacttgtcatttacaaatgttgatgatgaaacactctacgtaatctcaaagtgttgtcgtgggcttttgcaact 1513516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 3438598 - 3438677
Alignment:
Q  18 attgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgtt 98  Q
    ||||| |||||||  |||||||||||||||| ||  |||  |||| || ||||||||||||| ||||||||||||||||||    
T  3438598 attgagcttgtcacatacaagagttgatgataaat-actccatgtaatctcaaagagttgttgtgggcttttgcaactgtt 3438677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 370875 - 370803
Alignment:
Q  130 ggagtgaatcatgtggtagaaaactgcacacaa-cttagagagatcgatttggggggttgtgataaagtgcat 201  Q
    |||||||| ||||||||  |||||||||||||| || ||||||||| ||||  | |||||| |||||||||||    
T  370875 ggagtgaagcatgtggtgaaaaactgcacacaacctgagagagatcaatttaagcggttgtaataaagtgcat 370803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 1600431 - 1600335
Alignment:
Q  185 gttgtgataaagtgcatgcaaatgttgttgcctcaatggtacattcacggacatcattaagaaagataggagctccacctggttttgatttgagtga 281  Q
    ||||| || ||||| |||| || ||||||| ||| ||||||| || | || |||| || |||||||||| ||||||||||| ||||  |||||||||    
T  1600431 gttgtcatgaagtgaatgctaaggttgttgtctcgatggtacttttaaggccatccttgagaaagatagcagctccacctgattttcctttgagtga 1600335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 53761899 - 53761947
Alignment:
Q  116 atgtcacagataaaggagtgaatcatgtggtagaaaactgcacacaact 164  Q
    ||||||| || || |||||||| ||||||| ||||||||||||||||||    
T  53761899 atgtcacggacaagggagtgaaacatgtggaagaaaactgcacacaact 53761947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 23 - 274
Target Start/End: Original strand, 51113818 - 51114069
Alignment:
Q  23 acttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtcac 122  Q
    ||||||||  |||||  |||||||||||| ||||  ||||||| || |||||||||| ||||||||||||||||||  ||    |||||    |||||||    
T  51113818 acttgtcaaatacaatggttgatgatgaaacactctatgtgatctcgaagagttgttgtgggcttttgcaactgttactgaaaaattgttaccatgtcac 51113917  T
Q  123 agataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgcctcaatg 222  Q
    ||| || |||||||| |||||||||||||| |||||| |||| ||||||||  ||||   |||||||  |||||||||||| ||| ||||||||||||||    
T  51113918 agagaagggagtgaagcatgtggtagaaaaatgcacaaaactaagagagattaatttaaagggttgttttaaagtgcatgctaattttgttgcctcaatg 51114017  T
Q  223 gtacattcacggacatcattaagaaagataggagctccacctggttttgatt 274  Q
     ||  |||| || ||||||| ||| | |||  ||||||||||||||||||||    
T  51114018 atattttcaaggccatcattgagagaaataacagctccacctggttttgatt 51114069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 33 - 253
Target Start/End: Original strand, 514775 - 514995
Alignment:
Q  33 tacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtcacagataaagga 132  Q
    ||||||||| || |||||||||||| ||||||| || |||||||| | ||||||||||||||| ||  ||    |||||   | | ||||||| |  |||    
T  514775 tacaagagtcgacgatgaagcacttcatgtgatctcgaagagttgctgtgggcttttgcaactattactgcaaaattgtgaaggtatcacagagacggga 514874  T
Q  133 gtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgcctcaatggtacattcac 232  Q
    ||||| ||||||||  |||||||||||| ||| ||||||||| ||||  | |||||| |||||||||||   |||||||||||| ||||||||  ||||     
T  514875 gtgaagcatgtggtgaaaaactgcacacgactgagagagatcaatttaagaggttgtaataaagtgcattataatgttgttgccccaatggtattttcaa 514974  T
Q  233 ggacatcattaagaaagatag 253  Q
    || ||||||| ||||||||||    
T  514975 ggccatcattgagaaagatag 514995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 51121023 - 51121128
Alignment:
Q  116 atgtcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgc 215  Q
    |||||||| | ||||||||||| |||||||||||||||||||||||| | |||| |||| | ||| ||  |||  ||||||| |||||  || |||||||    
T  51121023 atgtcacacaaaaaggagtgaaacatgtggtagaaaactgcacacaattgagagtgatcaacttgaggtattgctataaagtccatgctgattttgttgc 51121122  T
Q  216 ctcaat 221  Q
    ||||||    
T  51121123 ctcaat 51121128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 51764477 - 51764616
Alignment:
Q  23 acttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtcac 122  Q
    ||||||||||||||| |||||||||| || ||||  ||| ||| ||||||| |||||  |||||||||||||| ||  ||    |||||  | ||||||     
T  51764477 acttgtcatttacaaaagttgatgataaaacactctatgcgatctcaaagaattgttgcgggcttttgcaactattactggaacattgtgataatgtcaa 51764576  T
Q  123 agataaaggagtgaatcatgtggtagaaaactgcacacaa 162  Q
     || || |||||||| |||||||| |||||||||||||||    
T  51764577 ggagaagggagtgaaacatgtggttgaaaactgcacacaa 51764616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 598 - 651
Target Start/End: Original strand, 51114421 - 51114477
Alignment:
Q  598 ctatggtttggtgttaatattattc---tgcaaatttaattcttgattgtctctttc 651  Q
    |||||||||||||||||||||||||   | |||||||||||||||||| ||||||||    
T  51114421 ctatggtttggtgttaatattattctagtacaaatttaattcttgattatctctttc 51114477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 1657214 - 1657156
Alignment:
Q  122 cagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttg 180  Q
    |||| ||||||||||  |||||||| ||||| ||||||||||| |||||| ||||||||    
T  1657214 cagacaaaggagtgacgcatgtggttgaaaaatgcacacaactgagagaggtcgatttg 1657156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 51120926 - 51121000
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaa 93  Q
    |||||||||||   |||||||||||||||||||  |||  |||| || ||||||||||||  |||||||||||||    
T  51120926 ttgaacttgtcgcatacaagagttgatgatgaaaaactatatgtaatctcaaagagttgtcgtgggcttttgcaa 51121000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 8e-32; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 22 - 339
Target Start/End: Complemental strand, 32151364 - 32151044
Alignment:
Q  22 aacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtca 121  Q
    |||||||||| ||||||  ||||||||||| ||||  ||||||| ||||||||||||  |||||||||||||||||| ||| | | |||||   ||||||    
T  32151364 aacttgtcatgtacaaggtttgatgatgaaacactctatgtgatctcaaagagttgtagtgggcttttgcaactgttattggtgtcttgtaaatatgtca 32151265  T
Q  122 cagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgcctcaat 221  Q
    |||| || || ||||| ||||||    ||||||| | |||||| || |||||| ||||  ||||||||||| ||||||||||  || ||||||    |||    
T  32151264 cagagaagggggtgaagcatgtgaggaaaaactgtatacaactgagggagatcaatttaaggggttgtgatcaagtgcatgctgatattgttgataaaat 32151165  T
Q  222 ggtacattcacggacatcattaagaaagataggagctccacctggttttgatttgagtgatacaga---gaaactcttcttgcaccatggatgctatgtt 318  Q
    ||||  |||| || ||||||| |||||||||   ||||||||| ||| |||||| ||||| | | |   ||||||||||||||  |||||||||  ||||    
T  32151164 ggtattttcaaggccatcattgagaaagataactgctccacctcgttatgatttcagtgacaaaaaaaggaaactcttcttgcgtcatggatgccttgtt 32151065  T
Q  319 tcgtagtagtttgaaactgct 339  Q
    || ||||||||||||| ||||    
T  32151064 tcctagtagtttgaaagtgct 32151044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 19 - 164
Target Start/End: Original strand, 18315306 - 18315451
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||||||||||  ||||| ||||||||||||||||||  ||||||| ||||||||||||  | |||||||||||||||| |||      ||| ||||||    
T  18315306 ttgaacttgtcacatacaaaagttgatgatgaagcactctatgtgatctcaaagagttgtcgtaggcttttgcaactgttattggaacgctgttgtgatg 18315405  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactgcacacaact 164  Q
    ||||||| |||||||  ||  |||||||||||||||||||||||||    
T  18315406 tcacagagaaaggagaaaagtatgtggtagaaaactgcacacaact 18315451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 27922574 - 27922380
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||||||||||| |||||  |||||||||||||||||| || |||| ||||||||||||| |||||||||| || |||   |     |||||| ||||     
T  27922574 ttgaacttgtcatatacaaatgttgatgatgaagcactttatatgatctcaaagagttgttgtgggcttttgaaattgtcacttgaaaattgtaatgatt 27922475  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgtt 213  Q
    ||||| | || |||||||| |||||||||||||||||||| ||||| ||| ||||   |||||  |||||| ||||||| ||||| ||| |||||    
T  27922474 tcacaaagaagggagtgaaccatgtggtagaaaactgcactcaactgagaaagattagtttggatggttgtcataaagtacatgctaatattgtt 27922380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 21235624 - 21235463
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||||||||||| |||| |||||||| | |||| |||  || ||||||||||||| |||    ||||||||||||||||  |     |||||  | |||    
T  21235624 ttgaacttgtcatatacaggagttgataacgaagaactctatttgatttcaaagagctgtcgcaggcttttgcaactgttacttgagcattgttattatg 21235525  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttg 180  Q
    ||||  | | ||| |||||||||||||||||||||||||||||||| || |||||| |||||    
T  21235524 tcactaaaagaggcgtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttg 21235463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 174
Target Start/End: Complemental strand, 44736560 - 44736446
Alignment:
Q  60 tgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtcacagataaaggagtgaatcatgtggtagaaaactgcaca 159  Q
    |||||| ||||||||||||| |||||||||| ||||| | |||   ||||||  | ||||||||   || |||||||| ||||| |||||||| || |||    
T  44736560 tgtgatctcaaagagttgttgtgggcttttgtaactggtattgagctattgttataatgtcacaacgaagggagtgaaacatgttgtagaaaattgtaca 44736461  T
Q  160 caacttagagagatc 174  Q
    ||||| |||||||||    
T  44736460 caactaagagagatc 44736446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 5767811 - 5767920
Alignment:
Q  142 gtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgcctcaatggtacattcacggacatcat 241  Q
    |||||| | |||||||||||||| ||||||||  ||||||  || |||  ||| ||||| || || ||||||||||| ||||||  |||| || ||||||    
T  5767811 gtggtaaacaactgcacacaactcagagagataaatttggatggctgtcctaatgtgcaagctaaagttgttgcctccatggtagtttcaaggccatcat 5767910  T
Q  242 taagaaagat 251  Q
    | ||||||||    
T  5767911 tgagaaagat 5767920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 17628047 - 17628123
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaact 95  Q
    ||||||||||||  ||| |||||||||||| |||||||   |||||| ||||||| ||||| |||||| ||| ||||    
T  17628047 ttgaacttgtcacatactagagttgatgataaagcactccgtgtgatctcaaagaattgttttgggctcttgaaact 17628123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 34936200 - 34936272
Alignment:
Q  23 acttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaact 95  Q
    ||||||||| |||||||||||||||| || ||||  |||  ||  |||||||||||  |||||||||||||||    
T  34936200 acttgtcatatacaagagttgatgataaaacactctatgccatcgcaaagagttgtcgtgggcttttgcaact 34936272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 28935115 - 28934933
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||||||||||  |||||||||||| ||||||||||| | |||||||||||||||||||  ||| ||| |||  |||||| ||||  | ||   |  ||    
T  28935115 ttgaacttgtcacatacaagagttgacgatgaagcactcagtgtgatttcaaagagttgtcatggacttatgcgcctgttgctgttaaactgcgatagtg 28935016  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcat 201  Q
    | ||| | ||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||  | ||||| ||||||||||    
T  28935015 ttacaaaaaaaggagtgaagcatgtggtagaaaattgcacacaactaagagagatctatttggatgattgtgttaaagtgcat 28934933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 40 - 173
Target Start/End: Original strand, 6603256 - 6603389
Alignment:
Q  40 gttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtcacagataaaggagtgaatc 139  Q
    |||||||||||| || |  ||| ||| |||||||||||| ||||||||||| |||| || |||   ||||||  | |||||||||| ||||||||||| |    
T  6603256 gttgatgatgaaacagtctatgcgatctcaaagagttgtcctgggcttttggaactattattgaaatattgttattatgtcacagagaaaggagtgaaac 6603355  T
Q  140 atgtggtagaaaactgcacacaacttagagagat 173  Q
    |||||||||||||||||| |||||| ||| ||||    
T  6603356 atgtggtagaaaactgcaaacaactgagaaagat 6603389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 6432227 - 6432084
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||||||||||  |||||| |||||||||||| ||||| ||||||| | ||||| ||||| ||||||| ||||||| ||  |||   |||||  | |||    
T  6432227 ttgaacttgtcaaatacaagcgttgatgatgaaacactttatgtgatcttaaagaattgttgtgggcttctgcaactattcctgtacaattgtgataatg 6432128  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactgcacacaa 162  Q
    ||||| | || |||||||| | |||||||||||| |||||||||    
T  6432127 tcacacagaagggagtgaaacttgtggtagaaaaatgcacacaa 6432084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 6394930 - 6394765
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||||||||||  |||||| |||||||||||| | |||  |||||| ||||||| ||||| ||||||||||||| |     |   | ||||||   |||    
T  6394930 ttgaacttgtcaaatacaagcgttgatgatgaaactctttctgtgatctcaaagaattgttgtgggcttttgcaattacaacttgataattgtaaaaatg 6394831  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggg 184  Q
    ||||||| || || ||| | |||||||||||||||||||||||| | ||||||||  |||||||||    
T  6394830 tcacagaaaagggtgtggaacatgtggtagaaaactgcacacaattgagagagattaatttggggg 6394765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 6585269 - 6585346
Alignment:
Q  18 attgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaact 95  Q
    |||||||||||||  |||||  |||||||||||| ||||  ||||||| |||||||||||||||| ||||||| ||||    
T  6585269 attgaacttgtcagatacaaaggttgatgatgaaacactctatgtgatctcaaagagttgttctgcgcttttggaact 6585346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 180
Target Start/End: Original strand, 11936312 - 11936469
Alignment:
Q  23 acttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtcac 122  Q
    |||||||||||||||||||||| ||| || ||||  ||  ||| ||||||||||||  |||||||||||||||||   |    | ||||   | ||||||    
T  11936312 acttgtcatttacaagagttgacgataaatcactctattggatctcaaagagttgtagtgggcttttgcaactgtcacttaaattttgtgaaggtgtcac 11936411  T
Q  123 agataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttg 180  Q
    ||| ||||||||||  |||||||| ||||| ||||||||| | |||||| ||||||||    
T  11936412 agacaaaggagtgacgcatgtggttgaaaaatgcacacaaatgagagaggtcgatttg 11936469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 180
Target Start/End: Original strand, 11948292 - 11948449
Alignment:
Q  23 acttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtcac 122  Q
    |||||||||||||||||||||| ||| || ||||  ||  ||| ||||||||||||  |||||||||||||||||   |    | ||||   | ||||||    
T  11948292 acttgtcatttacaagagttgacgataaatcactctattggatctcaaagagttgtagtgggcttttgcaactgtcacttaaattttgtgaaggtgtcac 11948391  T
Q  123 agataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttg 180  Q
    ||| ||||||||||  |||||||| ||||| ||||||||| | |||||| ||||||||    
T  11948392 agacaaaggagtgacgcatgtggttgaaaaatgcacacaaatgagagaggtcgatttg 11948449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 10579881 - 10579924
Alignment:
Q  130 ggagtgaatcatgtggtagaaaactgcacacaacttagagagat 173  Q
    ||||| || |||||||||||||||||||||||||||||||||||    
T  10579881 ggagttaaacatgtggtagaaaactgcacacaacttagagagat 10579924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 6410072 - 6409996
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaact 95  Q
    ||||||| ||||  |||||| |||||||||||| | ||| ||||||| ||||||| ||||| | |||||||||||||    
T  6410072 ttgaactagtcaaatacaagcgttgatgatgaaactctttatgtgatctcaaagaattgttgtcggcttttgcaact 6409996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 14820669 - 14820605
Alignment:
Q  109 tgtagtgatgtcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagat 173  Q
    |||| |||||||||||| || || ||||| ||||||||| ||||||||||||| || ||||||||    
T  14820669 tgtaatgatgtcacagagaagggtgtgaaacatgtggtaaaaaactgcacacagctgagagagat 14820605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 7994215 - 7994369
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgtt-gttgttttattgtagtgat 117  Q
    |||||| |||||  |||||| ||| |||| ||| ||||  ||||||| ||||||| ||||||||| ||||||||||| ||  |||   | ||||| ||||    
T  7994215 ttgaacatgtcaaatacaagggttaatgacgaaacactatatgtgatctcaaagaattgttctggacttttgcaactattacttgaact-ttgtaatgat 7994313  T
Q  118 gtcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagat 173  Q
    || || ||  | |||||||| |||||||||||||||||||| ||||| | ||||||    
T  7994314 gttaccgaggagggagtgaaacatgtggtagaaaactgcacgcaactgaaagagat 7994369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 12102254 - 12102219
Alignment:
Q  137 atcatgtggtagaaaactgcacacaacttagagaga 172  Q
    |||||||||||||||||||||||||||| |||||||    
T  12102254 atcatgtggtagaaaactgcacacaactgagagaga 12102219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 6415921 - 6415880
Alignment:
Q  130 ggagtgaatcatgtggtagaaaactgcacacaacttagagag 171  Q
    |||||||| ||||||||||| |||||||||||||| ||||||    
T  6415921 ggagtgaaacatgtggtagagaactgcacacaactaagagag 6415880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 6597040 - 6597076
Alignment:
Q  134 tgaatcatgtggtagaaaactgcacacaacttagaga 170  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  6597040 tgaaacatgtggtagaaaactgcacaaaacttagaga 6597076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 276
Target Start/End: Complemental strand, 9411324 - 9411164
Alignment:
Q  116 atgtcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgc 215  Q
    |||||| |||||| |||||||  |||||||||| ||| |||   ||||| | ||||||| ||||| || ||||| ||  ||||||||| ||| ||||||     
T  9411324 atgtcagagataagggagtgatgcatgtggtaggaaattgcctgcaactcaaagagatcaatttgcggcgttgtcatcgagtgcatgctaatattgttga 9411225  T
Q  216 ctcaatggtacattcacggacatcattaagaaagataggagctccacctggttttgatttg 276  Q
    |   ||||||  |||| || | ||||| || ||||||  | ||||||||||||||||||||    
T  9411224 cgatatggtattttcaaggccgtcattgagcaagataaaaactccacctggttttgatttg 9411164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 22 - 210
Target Start/End: Original strand, 1037700 - 1037888
Alignment:
Q  22 aacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtca 121  Q
    |||||||||  |||| | |||||||||||| ||||  || |||| ||||||| ||||| ||||||||| ||||||||  ||    |||||  ||| ||||    
T  1037700 aacttgtcacatacatgtgttgatgatgaaacactctatatgatctcaaagaattgttgtgggcttttacaactgtttctggaaaattgtgatgaagtca 1037799  T
Q  122 cagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgtt 210  Q
    |||| || || ||||| ||||| || ||||||||||||||||| |||||  |||||||||||||||||||||| ||| |||| ||||||    
T  1037800 cagagaatggtgtgaaacatgtagtcgaaaactgcacacaactcagagaagtcgatttggggggttgtgataatgtgaatgccaatgtt 1037888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 45245139 - 45245279
Alignment:
Q  40 gttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtcacagataaaggagtgaatc 139  Q
    |||||||||||| ||||  ||||||| ||||||||||||  ||||||||||||||| || |||    | |||  | ||||||||||||| |||||||| |    
T  45245139 gttgatgatgaaacactccatgtgatctcaaagagttgtcgtgggcttttgcaactattattgaaaaaatgttatcatgtcacagataagggagtgaaac 45245238  T
Q  140 atgtggtagaaaactgcacacaacttagagagatcgatttg 180  Q
    ||||||||||||| ||||||||||||| ||||||| |||||    
T  45245239 atgtggtagaaaattgcacacaacttacagagatcaatttg 45245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 32785805 - 32785884
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgtt 98  Q
    ||||||||||||  ||||||| ||||||||||||||||| ||||||| ||||  |||| |  |||||||||| |||||||    
T  32785805 ttgaacttgtcacatacaagaattgatgatgaagcactttatgtgatctcaataagttttcatgggcttttgaaactgtt 32785884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 44575633 - 44575710
Alignment:
Q  124 gataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcat 201  Q
    ||||||||  ||||||||||||||||||||||||||||||  |||||| || ||||| |   ||||||||| ||||||    
T  44575633 gataaaggcttgaatcatgtggtagaaaactgcacacaaccgagagagctcaatttgagaaattgtgataatgtgcat 44575710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 1e-18; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 41901568 - 41901704
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||||||||||| ||||| ||||||||||||||||||| || |||| ||||||||||||| ||| |||||| || |||   |     |||||| |||||    
T  41901568 ttgaacttgtcatatacaaaagttgatgatgaagcactttatatgatctcaaagagttgttgtggacttttgaaattgtcacttcaagattgtaatgatg 41901667  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactg 155  Q
    ||||| | || |||||||| |||||||||||||||||    
T  41901668 tcacaaagaagggagtgaagcatgtggtagaaaactg 41901704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 32267542 - 32267387
Alignment:
Q  18 attgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgat 117  Q
    |||||||||||||   |||| ||||||||||||||||||| || |||| ||||||||||||| |||||||||| || |||   |     |||||| ||||    
T  32267542 attgaacttgtcacaaacaatagttgatgatgaagcactttatatgatctcaaagagttgttgtgggcttttgaaattgtcacttaaaaattgtaatgat 32267443  T
Q  118 gtcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagat 173  Q
     ||||| | || |||||||| ||||| |||||||||||||| ||||||||| ||||    
T  32267442 atcacaaagaagggagtgaagcatgtagtagaaaactgcacgcaacttagaaagat 32267387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 17205577 - 17205527
Alignment:
Q  107 attgtagtgatgtcacagataaaggagtgaatcatgtggtagaaaactgca 157  Q
    |||||| |||||||||||| |||||| |||| |||||||||||||||||||    
T  17205577 attgtaatgatgtcacagaaaaaggattgaaacatgtggtagaaaactgca 17205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 41889587 - 41889717
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    |||||||| |||| ||||| ||||||||||||| ||||| ||  ||| |||||||||||||  ||||||| | || ||||  |     |||||  |||||    
T  41889587 ttgaacttatcatatacaaaagttgatgatgaaacactttataagatctcaaagagttgttgcgggctttcgaaattgttacttaaaaattgttatgatg 41889686  T
Q  119 tcacagataaaggagtgaatcatgtggtaga 149  Q
    ||||| | || ||||||||||||||||||||    
T  41889687 tcacaaagaagggagtgaatcatgtggtaga 41889717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 20478223 - 20478267
Alignment:
Q  127 aaaggagtgaatcatgtggtagaaaactgcacacaacttagagag 171  Q
    ||||||| ||| ||||| |||||||||||||||||||| ||||||    
T  20478223 aaaggagcgaaacatgtcgtagaaaactgcacacaactgagagag 20478267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 660 - 841
Alignment:
Q  22 aacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatgtca 121  Q
    |||||||||  |||||| || ||||||||| ||||  || |||| || |||| ||||| |||||| || ||||||||  ||    |||||  ||| ||||    
T  660 aacttgtcacatacaagtgtcgatgatgaaacactctatatgatctcgaagaattgttgtgggctattacaactgttactggaaaattgtgatgaagtca 759  T
Q  122 cagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgc 203  Q
     ||| || || ||||| ||||| ||||||||||||||||||||| || | |||||||| |||||||||||||| ||| ||||    
T  760 tagagaatggtgtgaaacatgtagtagaaaactgcacacaacttcgataaatcgattttgggggttgtgataatgtgaatgc 841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 7554554 - 7554415
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    |||||||| |||| |||||| |||||||||||||||||  || |||| ||||||||||||  ||| ||||| ||||||||  ||      |||  | |||    
T  7554554 ttgaacttatcatatacaagtgttgatgatgaagcactctatatgatctcaaagagttgtggtggacttttacaactgttactgaaaggatgtgataatg 7554455  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactgcac 158  Q
    ||||||| || |||||||| ||||||||||||||||||||    
T  7554454 tcacagaaaagggagtgaagcatgtggtagaaaactgcac 7554415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 9581037 - 9580953
Alignment:
Q  117 tgtcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcat 201  Q
    ||||||| | || |||||||| | |||||||||||| |||||||||||   |||||| |||||| |||||||| |||||||||||    
T  9581037 tgtcacaaacaatggagtgaagcgtgtggtagaaaattgcacacaactggaagagattgatttgaggggttgttataaagtgcat 9580953  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 9586583 - 9586509
Alignment:
Q  141 tgtggtagaaaactgcacacaacttagagagatcgatttggggggttgtgataaagtgcatgcaaatgttgttgc 215  Q
    |||||||||||| |||||||| || | ||| ||||||||| | |||||||||||| || |||| |||||||||||    
T  9586583 tgtggtagaaaattgcacacatctaaaagaaatcgatttgagaggttgtgataaattgaatgctaatgttgttgc 9586509  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 170
Target Start/End: Original strand, 19468532 - 19468683
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttattgtagtgatg 118  Q
    ||||| ||||||  |||||  |||||||||||| ||||| ||||||| |||||||  |||| ||| |||||| || | ||  ||     ||||| |||||    
T  19468532 ttgaagttgtcagatacaaaggttgatgatgaaacactttatgtgatctcaaagaactgttgtggacttttggaattatttgtggacggttgtaatgatg 19468631  T
Q  119 tcacagataaaggagtgaatcatgtggtagaaaactgcacacaacttagaga 170  Q
    ||||||| ||||||||||| ||||||  |||||| ||| ||||||| |||||    
T  19468632 tcacagagaaaggagtgaaacatgtgaaagaaaattgctcacaactgagaga 19468683  T

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Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 39250 - 39177
Alignment:
Q  19 ttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgca 92  Q
    ||||||||| |||||||||  ||| |||||||| ||||| ||||||| ||||||||||||  ||||||||||||    
T  39250 ttgaacttgacatttacaaaggttaatgatgaaacactttatgtgatctcaaagagttgtagtgggcttttgca 39177  T

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Target: chr7 (Bit Score: 34; Significance: 0.000000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 10170202 - 10170259
Alignment:
Q  107 attgtagtgatgtcacagataaaggagtgaatcatgtggtagaaaactgcacacaact 164  Q
    |||||| |||||||||||| ||||||||||| ||||||  |||||||||| |||||||    
T  10170202 attgtaatgatgtcacagagaaaggagtgaaacatgtgaaagaaaactgctcacaact 10170259  T

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Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 10177727 - 10177784
Alignment:
Q  107 attgtagtgatgtcacagataaaggagtgaatcatgtggtagaaaactgcacacaact 164  Q
    |||||| |||||||||||| ||||||||||| ||||||  |||||||||| |||||||    
T  10177727 attgtaatgatgtcacagagaaaggagtgaaacatgtgaaagaaaactgctcacaact 10177784  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 10614562 - 10614521
Alignment:
Q  116 atgtcacagataaaggagtgaatcatgtggtagaaaactgca 157  Q
    ||||||||||  |||||||||| |||||||||||||||||||    
T  10614562 atgtcacagaagaaggagtgaaacatgtggtagaaaactgca 10614521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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