View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13808_low_46 (Length: 242)
Name: NF13808_low_46
Description: NF13808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13808_low_46 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 19 - 242
Target Start/End: Original strand, 3464332 - 3464555
Alignment:
| Q |
19 |
gatatgccaggttccacactgacaataaggtacctatcacaaaaataatcacatgtagtaaaaggttagcaacatatatagtttcttttctcttcaaaat |
118 |
Q |
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| T |
3464332 |
gatatgccaggttccacactgacaataaggtacctatcacaaaaataatcacatgtagtaaaaggttagcaacatatatagtttcttttctcttcaaaat |
3464431 |
T |
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| Q |
119 |
tgtgaaatgtcaaaaacttatattgttggctccttttttatgttacaataataatgataaaaccatgtttcgaaattgcggttgctgttatgctacgaat |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3464432 |
tgtgaaatgtcaaaaacttatattgttggctccttttttatgttgcaataataatgataaaaccatgtttcgaaattgcggttgctgttatgctacgaat |
3464531 |
T |
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| Q |
219 |
tttgatactgcacgaaatacagac |
242 |
Q |
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|||||||||||||||||||||||| |
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| T |
3464532 |
tttgatactgcacgaaatacagac |
3464555 |
T |
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