View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1380_high_24 (Length: 341)
Name: NF1380_high_24
Description: NF1380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1380_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 30 - 333
Target Start/End: Original strand, 29947983 - 29948286
Alignment:
| Q |
30 |
tcaacactttcaggtaccaaataattgttcaacaatataatagttgtgacacctaattaatgannnnnnnaagaatatacaaatcaagggaatgttataa |
129 |
Q |
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| T |
29947983 |
tcaacactttcaggtaccaaataattgttcaacaatataatagttgtgacacctaattaatgatttttttaagaatatacaaatcaagggaatgttataa |
29948082 |
T |
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| Q |
130 |
aattttgagatctggttgtaggagaataaattgatgggtaacccgttagtggtaggtgacaaaacctccaatatcattcattgacacgtgacatttgatc |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29948083 |
aattttgagatctggttgtaggagaataaattgatgggtaacccgttagtggtaggtgacaaaacctccaatatcattcattgacacgtgacatttgatc |
29948182 |
T |
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| Q |
230 |
tacaatgcaaactatattgttttttaatcaagttaggactcaaannnnnnnnnnnnnnngcataattctcttctttttgttttaatagatggattctctc |
329 |
Q |
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||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |
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| T |
29948183 |
tacaatgcaaactatattgttttttaatcaagttaggactctatttttatttttattttgcataattctcttctttttgttttaatagatggattctctc |
29948282 |
T |
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| Q |
330 |
tgct |
333 |
Q |
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|||| |
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| T |
29948283 |
tgct |
29948286 |
T |
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