View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1380_high_32 (Length: 308)
Name: NF1380_high_32
Description: NF1380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1380_high_32 |
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Alignment Details
Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 30 - 186
Target Start/End: Complemental strand, 3063688 - 3063532
Alignment:
| Q |
30 |
ttgtcctttccttactaagaaacaacgtgcttgaattttgaatttattcatgaaattttgtaatctgtatgcagctggaccatgaagatgatacagcttc |
129 |
Q |
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| T |
3063688 |
ttgtcctttccttactaagaaacaacgtgcttgaattttgaatttattcatgaaattttgtaatctgtatgcagctggaccatgaagatgatacagcttc |
3063589 |
T |
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| Q |
130 |
accaattcaacctgtgcacatgccaacacaacatggcaaggaggtgagccttctaca |
186 |
Q |
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| T |
3063588 |
accaattcaacctgtgcacatgccaacacaatatggtaaggaggtgagccttctaca |
3063532 |
T |
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