View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1380_low_13 (Length: 453)

Name: NF1380_low_13
Description: NF1380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1380_low_13
NF1380_low_13
[»] chr7 (16 HSPs)
chr7 (14-297)||(34654367-34654650)
chr7 (208-253)||(6427204-6427249)
chr7 (214-253)||(4971290-4971329)
chr7 (205-252)||(19426571-19426618)
chr7 (213-252)||(33050182-33050221)
chr7 (213-251)||(2347093-2347131)
chr7 (332-366)||(34654691-34654725)
chr7 (212-254)||(41080124-41080166)
chr7 (214-252)||(47530324-47530362)
chr7 (214-252)||(49128723-49128761)
chr7 (214-255)||(22692084-22692125)
chr7 (211-244)||(29763827-29763860)
chr7 (214-255)||(37392043-37392084)
chr7 (214-251)||(37856188-37856225)
chr7 (215-252)||(46725618-46725655)
chr7 (214-246)||(32919019-32919051)
[»] chr3 (26 HSPs)
chr3 (360-417)||(51162404-51162461)
chr3 (213-253)||(462433-462473)
chr3 (213-252)||(11327107-11327146)
chr3 (213-251)||(30580132-30580170)
chr3 (214-252)||(43169775-43169813)
chr3 (206-252)||(47683935-47683981)
chr3 (214-252)||(48405410-48405448)
chr3 (214-255)||(7867741-7867782)
chr3 (214-251)||(8254027-8254064)
chr3 (211-252)||(14957833-14957874)
chr3 (98-139)||(25703057-25703098)
chr3 (215-252)||(47101523-47101560)
chr3 (214-251)||(47683801-47683838)
chr3 (214-251)||(49196696-49196733)
chr3 (212-252)||(2482707-2482747)
chr3 (208-252)||(24482996-24483040)
chr3 (212-252)||(29573389-29573429)
chr3 (217-253)||(32187144-32187180)
chr3 (214-246)||(33256309-33256341)
chr3 (214-246)||(35376590-35376622)
chr3 (212-252)||(37988630-37988670)
chr3 (210-246)||(45205284-45205320)
chr3 (208-240)||(47484284-47484316)
chr3 (212-252)||(51464305-51464345)
chr3 (214-246)||(52564673-52564705)
chr3 (214-246)||(53932430-53932462)
[»] chr4 (21 HSPs)
chr4 (210-252)||(18568848-18568890)
chr4 (66-139)||(23099044-23099117)
chr4 (212-253)||(925094-925135)
chr4 (211-255)||(23220332-23220376)
chr4 (212-252)||(39010170-39010210)
chr4 (213-252)||(48099810-48099849)
chr4 (214-252)||(169535-169573)
chr4 (213-251)||(32365690-32365728)
chr4 (209-255)||(47014934-47014980)
chr4 (214-252)||(51359823-51359861)
chr4 (210-251)||(11997681-11997722)
chr4 (212-253)||(26885289-26885330)
chr4 (213-246)||(30042133-30042166)
chr4 (214-251)||(54036552-54036589)
chr4 (214-246)||(10994191-10994223)
chr4 (214-246)||(13267517-13267549)
chr4 (210-246)||(15596392-15596428)
chr4 (215-251)||(28676175-28676211)
chr4 (214-246)||(34259815-34259847)
chr4 (211-251)||(39241324-39241364)
chr4 (214-246)||(43168753-43168785)
[»] chr8 (6 HSPs)
chr8 (214-253)||(6849293-6849332)
chr8 (213-253)||(38844822-38844862)
chr8 (213-246)||(21273749-21273782)
chr8 (213-246)||(43873730-43873763)
chr8 (214-255)||(44380644-44380685)
chr8 (215-255)||(6806909-6806949)
[»] chr1 (15 HSPs)
chr1 (214-253)||(30530606-30530645)
chr1 (214-251)||(34974783-34974820)
chr1 (207-255)||(32821628-32821676)
chr1 (213-251)||(41507217-41507255)
chr1 (214-252)||(48872983-48873021)
chr1 (214-251)||(9011645-9011682)
chr1 (215-252)||(18959005-18959042)
chr1 (214-251)||(27687542-27687579)
chr1 (214-251)||(40596077-40596114)
chr1 (214-251)||(42256460-42256497)
chr1 (216-253)||(50035569-50035606)
chr1 (213-253)||(30687051-30687091)
chr1 (214-246)||(39669806-39669838)
chr1 (214-246)||(40612114-40612146)
chr1 (214-246)||(48325806-48325838)
[»] chr5 (18 HSPs)
chr5 (212-249)||(30776634-30776671)
chr5 (206-255)||(41460108-41460157)
chr5 (88-132)||(2626629-2626673)
chr5 (212-252)||(6420670-6420710)
chr5 (213-252)||(42699056-42699095)
chr5 (210-252)||(9599761-9599803)
chr5 (214-252)||(14914372-14914410)
chr5 (213-251)||(16143389-16143427)
chr5 (208-246)||(19952005-19952043)
chr5 (211-252)||(12718413-12718454)
chr5 (211-252)||(12779639-12779680)
chr5 (212-253)||(15639383-15639424)
chr5 (211-252)||(34381009-34381050)
chr5 (211-252)||(39788739-39788780)
chr5 (212-252)||(3263541-3263581)
chr5 (212-252)||(27440477-27440517)
chr5 (214-246)||(28501592-28501624)
chr5 (214-246)||(38500943-38500975)
[»] chr2 (14 HSPs)
chr2 (217-253)||(19529545-19529581)
chr2 (214-249)||(1489649-1489684)
chr2 (216-246)||(17267691-17267721)
chr2 (211-253)||(28165126-28165168)
chr2 (214-252)||(36909876-36909914)
chr2 (214-255)||(3299135-3299176)
chr2 (213-246)||(4344448-4344481)
chr2 (214-251)||(29795447-29795484)
chr2 (214-246)||(9834109-9834141)
chr2 (212-252)||(30487502-30487542)
chr2 (213-253)||(30856806-30856846)
chr2 (214-246)||(31296884-31296916)
chr2 (214-246)||(33002819-33002851)
chr2 (214-246)||(35171265-35171297)
[»] chr6 (6 HSPs)
chr6 (213-252)||(29376748-29376787)
chr6 (214-252)||(3339532-3339570)
chr6 (82-139)||(8684024-8684082)
chr6 (215-253)||(32621802-32621840)
chr6 (214-251)||(30945823-30945860)
chr6 (214-246)||(11785355-11785387)
[»] scaffold0662 (1 HSPs)
scaffold0662 (209-255)||(1073-1119)
[»] scaffold0148 (1 HSPs)
scaffold0148 (208-240)||(21490-21522)
[»] scaffold0032 (1 HSPs)
scaffold0032 (214-246)||(35992-36024)


Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 14 - 297
Target Start/End: Original strand, 34654367 - 34654650
Alignment:
Q  14 gaacctgtgggacatgcaagggtggctcttcccttccaatcagattattttaatatgcatgagtcaggaaaacaaaccactgaccacatgtttaagaggc 113  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||| ||||    
T  34654367 gaacctgtaggacatgcaagggtggctctccccttccaatcagattattttaatatgcatgagtcaggaaaacaaatccctaaccacatgtttaataggc 34654466  T
Q  114 acaaatctcttaccacttggactaatctatagttggtttaattttataattattacaccatccgatcattgttatacgaaacaaaaatgtcaaaaaattt 213  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34654467 acaaatcccttaccacttggacaaatctatagttggtttaattttataattattactccatccgatcattgttatacgaaacaaaaatgtcaaaaaattt 34654566  T
Q  214 gagaaatgatatttatacaaccattttgtgacatcttttaaaaactctcttctactgagatcatgtgcttactctctttcttcc 297  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34654567 gagaaatgatatttatacaatcattttgtgacatcttttaaaaactctcttccactgagatcatgtgcttactctctttcttcc 34654650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 6427204 - 6427249
Alignment:
Q  208 aaatttgagaaatgatatttatacaaccattttgtgacatctttta 253  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  6427204 aaatttgagaaatgatatttatacaaccactttttgacaactttta 6427249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 253
Target Start/End: Original strand, 4971290 - 4971329
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttta 253  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  4971290 gagaaatgatatttgtacaaccattttgtgacaactttta 4971329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 19426571 - 19426618
Alignment:
Q  205 aaaaaatttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||| | |||||||||||||| |||||||||||||||||| |||||    
T  19426571 aaaaaaatagagaaatgatatttgtacaaccattttgtgacaactttt 19426618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 33050182 - 33050221
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  33050182 tgagaaatgatatttgtacaaccattttgtgacaactttt 33050221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 2347131 - 2347093
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  2347131 tgagaaatgatatttgtacaaccattttgtgacaacttt 2347093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 366
Target Start/End: Original strand, 34654691 - 34654725
Alignment:
Q  332 ttgtcacaagaattgtcatcaaatgatcgtacaaa 366  Q
    ||||||||||||||||||||||||||| |||||||    
T  34654691 ttgtcacaagaattgtcatcaaatgattgtacaaa 34654725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 254
Target Start/End: Original strand, 41080124 - 41080166
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatcttttaa 254  Q
    |||||||||||||||| ||||| |||||||||||| |||||||    
T  41080124 ttgagaaatgatatttgtacaatcattttgtgacaacttttaa 41080166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 47530362 - 47530324
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  47530362 gagaaatgatatttatacaaccattttatgacaactttt 47530324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 252
Target Start/End: Original strand, 49128723 - 49128761
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||||||||||||||||| ||| |||||    
T  49128723 gagaaatgatatttatacaaccattttgtaacaactttt 49128761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 22692084 - 22692125
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttttaaa 255  Q
    |||||||||||||| |||||||||||| ||||| ||||||||    
T  22692084 gagaaatgatatttgtacaaccattttatgacaacttttaaa 22692125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 244
Target Start/End: Original strand, 29763827 - 29763860
Alignment:
Q  211 tttgagaaatgatatttatacaaccattttgtga 244  Q
    ||||||||||||||||| ||||||||||||||||    
T  29763827 tttgagaaatgatatttgtacaaccattttgtga 29763860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 37392043 - 37392084
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttttaaa 255  Q
    |||||||||||||| |||||||||||| ||||| ||||||||    
T  37392043 gagaaatgatatttgtacaaccattttttgacaacttttaaa 37392084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 37856225 - 37856188
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  37856225 gagaaatgatatttgtacaaccattttgtgacaacttt 37856188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 46725618 - 46725655
Alignment:
Q  215 agaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  46725618 agaaatgatatttatacaactattttgtgacaactttt 46725655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 32919051 - 32919019
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||||||||| ||||||||||||    
T  32919051 gagaaatgatatttatacaatcattttgtgaca 32919019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 8e-22; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 360 - 417
Target Start/End: Original strand, 51162404 - 51162461
Alignment:
Q  360 gtacaaagtagaaatactcttcctcatttaattctctatataaaagccaacctatttg 417  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51162404 gtacaaagtagaaacactcttcctcatttaattctctatataaaagccaacctatttg 51162461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 462473 - 462433
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatctttta 253  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  462473 tgagaaatgatatttgtacaaccattttgtgacaactttta 462433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 11327107 - 11327146
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  11327107 tgagaaatgatatttgtacaaccattttgtgacaactttt 11327146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 30580132 - 30580170
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  30580132 tgagaaatgatatttatacaaccattttatgacaacttt 30580170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 43169813 - 43169775
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  43169813 gagaaatgatatttgtacaaccattttgtgacaactttt 43169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 252
Target Start/End: Complemental strand, 47683981 - 47683935
Alignment:
Q  206 aaaaatttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||| ||| |||||||||| |||||||||||||||||| |||||    
T  47683981 aaaaattagagtaatgatatttgtacaaccattttgtgacaactttt 47683935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 252
Target Start/End: Original strand, 48405410 - 48405448
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  48405410 gagaaatgatatttgtacaaccattttgtgacaactttt 48405448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 7867782 - 7867741
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttttaaa 255  Q
    |||||||||||||| |||||| ||||||||||| ||||||||    
T  7867782 gagaaatgatatttgtacaactattttgtgacaacttttaaa 7867741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 8254027 - 8254064
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  8254027 gagaaatgatatttgtacaaccattttgtgacaacttt 8254064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 14957833 - 14957874
Alignment:
Q  211 tttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||||| |||||||| ||||||||| |||||    
T  14957833 tttgagaaatgatatttgtacaaccactttgtgacaactttt 14957874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 25703098 - 25703057
Alignment:
Q  98 cacatgtttaagaggcacaaatctcttaccacttggactaat 139  Q
    |||||||||||||| | |||| ||||||||||||||||||||    
T  25703098 cacatgtttaagagacccaaaactcttaccacttggactaat 25703057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 47101523 - 47101560
Alignment:
Q  215 agaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  47101523 agaaatgatatttgtacaaccattttgtgacaactttt 47101560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 47683801 - 47683838
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  47683801 gagaaatgatatttgtacaaccattttgtgacaacttt 47683838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 49196696 - 49196733
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  49196696 gagaaatgatatttgtacaaccattttgtgacaacttt 49196733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 2482747 - 2482707
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||||| |||| ||||||||||||| |||||    
T  2482747 ttgagaaatgatatttgtacatccattttgtgacaactttt 2482707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 252
Target Start/End: Complemental strand, 24483040 - 24482996
Alignment:
Q  208 aaatttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||    
T  24483040 aaatttgagaaatgatatttgaacatccattttgtgacaactttt 24482996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 29573429 - 29573389
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||||| |||||||||||||| ||| |||||    
T  29573429 ttgagaaatgatatttgtacaaccattttgtaacaactttt 29573389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 32187144 - 32187180
Alignment:
Q  217 aaatgatatttatacaaccattttgtgacatctttta 253  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  32187144 aaatgatatttgtacaaccattttgtgacaactttta 32187180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 33256309 - 33256341
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||||||||||||||||| ||||    
T  33256309 gagaaatgatatttatacaaccattttgagaca 33256341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 35376622 - 35376590
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  35376622 gagaaatgatatttgtacaaccattttgtgaca 35376590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 37988630 - 37988670
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||||||| ||| ||||||||||| |||||    
T  37988630 ttgagaaatgatatttatataactattttgtgacaactttt 37988670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 45205284 - 45205320
Alignment:
Q  210 atttgagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||||||| |||||| |||||||||||    
T  45205284 atttgagaaatgatatttgtacaactattttgtgaca 45205320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 240
Target Start/End: Original strand, 47484284 - 47484316
Alignment:
Q  208 aaatttgagaaatgatatttatacaaccatttt 240  Q
    |||||||||||||||||||| ||||||||||||    
T  47484284 aaatttgagaaatgatatttgtacaaccatttt 47484316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 51464345 - 51464305
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||||| |||||||| ||||||||| |||||    
T  51464345 ttgagaaatgatatttgtacaaccactttgtgacaactttt 51464305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 52564705 - 52564673
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  52564705 gagaaatgatatttgtacaaccattttgtgaca 52564673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 53932462 - 53932430
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  53932462 gagaaatgatatttgtacaaccattttgtgaca 53932430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 18568890 - 18568848
Alignment:
Q  210 atttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  18568890 atttgagaaatgatatttatacaaccattttgtgacaactttt 18568848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 23099044 - 23099117
Alignment:
Q  66 atatgcatgagtcaggaaaacaaaccactgaccacatgtttaa-gaggcacaaatctcttaccacttggactaat 139  Q
    |||||||||||||| |||| |||||   ||||||||||||||| ||| | |||||||||||||||||||||||||    
T  23099044 atatgcatgagtcacgaaa-caaactcatgaccacatgtttaaagagacccaaatctcttaccacttggactaat 23099117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 925135 - 925094
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatctttta 253  Q
    |||| |||||||||||||||||||||||||||||| ||||||    
T  925135 ttgataaatgatatttatacaaccattttgtgacaactttta 925094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 23220332 - 23220376
Alignment:
Q  211 tttgagaaatgatatttatacaaccattttgtgacatcttttaaa 255  Q
    ||||||||||||||||| |||||||||||| ||||| ||||||||    
T  23220332 tttgagaaatgatatttgtacaaccattttttgacaacttttaaa 23220376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 39010210 - 39010170
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  39010210 ttgagaaatgatatttgtacaaccattttgtgacaactttt 39010170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 48099810 - 48099849
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  48099810 tgagaaatgatatttatacaaccactttgtgacaactttt 48099849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 169573 - 169535
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  169573 gagaaatgatatttgtacaaccattttgtgacaactttt 169535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 32365728 - 32365690
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  32365728 tgagaaatgatatttgtacaaccattttgtgacaacttt 32365690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 47014934 - 47014980
Alignment:
Q  209 aatttgagaaatgatatttatacaaccattttgtgacatcttttaaa 255  Q
    |||| |||||||||||||| |||||| ||||||||||| ||||||||    
T  47014934 aattagagaaatgatatttgtacaactattttgtgacaacttttaaa 47014980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 51359861 - 51359823
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  51359861 gagaaatgatatttgtacaaccattttgtgacaactttt 51359823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 11997681 - 11997722
Alignment:
Q  210 atttgagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||||||| |||||||| ||||||||| ||||    
T  11997681 atttgagaaatgatatttgtacaaccactttgtgacaacttt 11997722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 26885289 - 26885330
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatctttta 253  Q
    |||||||||||||||| |||||||| ||||||||| ||||||    
T  26885289 ttgagaaatgatatttgtacaaccactttgtgacaactttta 26885330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 30042133 - 30042166
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgaca 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  30042133 tgagaaatgatatttgtacaaccattttgtgaca 30042166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 54036589 - 54036552
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  54036589 gagaaatgatatttgtacaaccattttgtgacaacttt 54036552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 10994223 - 10994191
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  10994223 gagaaatgatatttgtacaaccattttgtgaca 10994191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 13267549 - 13267517
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  13267549 gagaaatgatatttgtacaaccattttgtgaca 13267517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 15596392 - 15596428
Alignment:
Q  210 atttgagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||||||| |||||||| |||||||||    
T  15596392 atttgagaaatgatatttgtacaaccactttgtgaca 15596428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 28676211 - 28676175
Alignment:
Q  215 agaaatgatatttatacaaccattttgtgacatcttt 251  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  28676211 agaaatgatatttgtacaaccattttgtgacaacttt 28676175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 34259815 - 34259847
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  34259815 gagaaatgatatttgtacaaccattttgtgaca 34259847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 39241364 - 39241324
Alignment:
Q  211 tttgagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    ||||||||||||||||| |||||||| ||||||||| ||||    
T  39241364 tttgagaaatgatatttgtacaaccaatttgtgacaacttt 39241324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 43168785 - 43168753
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  43168785 gagaaatgatatttgtacaaccattttgtgaca 43168753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 6849332 - 6849293
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttta 253  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  6849332 gagaaatgatatttatacaaccattttgtgacaactttta 6849293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 38844862 - 38844822
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatctttta 253  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  38844862 tgagaaatgatatttgtacaaccattttgtgacaactttta 38844822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 21273782 - 21273749
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgaca 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  21273782 tgagaaatgatatttgtacaaccattttgtgaca 21273749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 43873763 - 43873730
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgaca 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  43873763 tgagaaatgatatttgtacaaccattttgtgaca 43873730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 44380685 - 44380644
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttttaaa 255  Q
    |||||||||||||| |||||||||||||||||| | ||||||    
T  44380685 gagaaatgatatttgtacaaccattttgtgacaacctttaaa 44380644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 6806909 - 6806949
Alignment:
Q  215 agaaatgatatttatacaaccattttgtgacatcttttaaa 255  Q
    ||||||||||||| ||||| |||||||||||| ||||||||    
T  6806909 agaaatgatatttgtacaatcattttgtgacaacttttaaa 6806949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 253
Target Start/End: Complemental strand, 30530645 - 30530606
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttta 253  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  30530645 gagaaatgatatttatacaaccattttgtgacaactttta 30530606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 34974820 - 34974783
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  34974820 gagaaatgatatttatacaaccattttgtgacaacttt 34974783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 32821628 - 32821676
Alignment:
Q  207 aaaatttgagaaatgatatttatacaaccattttgtgacatcttttaaa 255  Q
    |||| |||||||||||||||| |||||||| ||||||||| ||||||||    
T  32821628 aaaacttgagaaatgatatttgtacaaccactttgtgacaacttttaaa 32821676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 251
Target Start/End: Complemental strand, 41507255 - 41507217
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  41507255 tgagaaatgatatttgtacaaccattttgtgacaacttt 41507217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 48873021 - 48872983
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  48873021 gagaaatgatatttatacaaccactttgtgacaactttt 48872983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 9011645 - 9011682
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  9011645 gagaaatgatatttgtacaaccattttgtgacaacttt 9011682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 18959005 - 18959042
Alignment:
Q  215 agaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  18959005 agaaatgatatttatacaaccattttgttacaactttt 18959042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 27687579 - 27687542
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  27687579 gagaaatgatatttgtacaaccattttgtgacaacttt 27687542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 40596114 - 40596077
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  40596114 gagaaatgatatttgtacaaccattttgtgacaacttt 40596077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 42256460 - 42256497
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  42256460 gagaaatgatatttgtacaaccattttgtgacaacttt 42256497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 50035606 - 50035569
Alignment:
Q  216 gaaatgatatttatacaaccattttgtgacatctttta 253  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  50035606 gaaatgatatttgtacaaccattttgtgacaactttta 50035569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 30687051 - 30687091
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatctttta 253  Q
    ||||||||||||||| ||||||||||| |||||| ||||||    
T  30687051 tgagaaatgatatttgtacaaccatttagtgacaactttta 30687091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 39669806 - 39669838
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  39669806 gagaaatgatatttgtacaaccattttgtgaca 39669838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 40612114 - 40612146
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  40612114 gagaaatgatatttgtacaaccattttgtgaca 40612146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 48325838 - 48325806
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  48325838 gagaaatgatatttgtacaaccattttgtgaca 48325806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000007; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 30776634 - 30776671
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatct 249  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  30776634 ttgagaaatgatatttatacaaccattttatgacatct 30776671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 41460108 - 41460157
Alignment:
Q  206 aaaaatttgagaaatgatatttatacaaccattttgtgacatcttttaaa 255  Q
    |||| ||||||||||||||||||||||| |||||| ||||| ||||||||    
T  41460108 aaaagtttgagaaatgatatttatacaatcattttttgacaacttttaaa 41460157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 2626629 - 2626673
Alignment:
Q  88 aaccactgaccacatgtttaagaggcacaaatctcttaccacttg 132  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||    
T  2626629 aacctctgatcacatgtttaagaggcccaaatctcttaccacttg 2626673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 6420670 - 6420710
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  6420670 ttgagaaatgatatttctacaaccattttgtgacaactttt 6420710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 42699056 - 42699095
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  42699056 tgagaaatgatatttgtacaaccattttgtgacaactttt 42699095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 9599803 - 9599761
Alignment:
Q  210 atttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||||||| |||||||| ||||||||| |||||    
T  9599803 atttgagaaatgatatttgtacaaccaatttgtgacaactttt 9599761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 252
Target Start/End: Original strand, 14914372 - 14914410
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  14914372 gagaaatgatatttgtacaaccattttgtgacaactttt 14914410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 16143389 - 16143427
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  16143389 tgagaaatgatatttgtacaaccattttgtgacaacttt 16143427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 19952005 - 19952043
Alignment:
Q  208 aaatttgagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||||||||| || |||||||||||||||    
T  19952005 aaatttgagaaatgatatttgtaaaaccattttgtgaca 19952043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 12718454 - 12718413
Alignment:
Q  211 tttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||||| |||||||| ||||||||| |||||    
T  12718454 tttgagaaatgatatttgtacaaccaatttgtgacaactttt 12718413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 12779680 - 12779639
Alignment:
Q  211 tttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||||| |||||||| ||||||||| |||||    
T  12779680 tttgagaaatgatatttgtacaaccaatttgtgacaactttt 12779639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 15639383 - 15639424
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatctttta 253  Q
    |||||||||||||||| ||||||||||| |||||| ||||||    
T  15639383 ttgagaaatgatatttgtacaaccatttggtgacaactttta 15639424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 34381009 - 34381050
Alignment:
Q  211 tttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||||| |||||||| ||||||||| |||||    
T  34381009 tttgagaaatgatatttgtacaaccactttgtgacaactttt 34381050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 39788780 - 39788739
Alignment:
Q  211 tttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||||| |||||||||| ||||||| |||||    
T  39788780 tttgagaaatgatatttgtacaaccattatgtgacaactttt 39788739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 3263581 - 3263541
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||||| |||||||| ||||||||| |||||    
T  3263581 ttgagaaatgatatttgtacaaccaatttgtgacaactttt 3263541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 27440477 - 27440517
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||||| ||||| |||||||||||| |||||    
T  27440477 ttgagaaatgatatttgtacaatcattttgtgacaactttt 27440517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 28501592 - 28501624
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  28501592 gagaaatgatatttgtacaaccattttgtgaca 28501624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 38500943 - 38500975
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  38500943 gagaaatgatatttgtacaaccattttgtgaca 38500975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000003; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 19529545 - 19529581
Alignment:
Q  217 aaatgatatttatacaaccattttgtgacatctttta 253  Q
    |||||||||||||||||||||||||||||| ||||||    
T  19529545 aaatgatatttatacaaccattttgtgacaactttta 19529581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 249
Target Start/End: Complemental strand, 1489684 - 1489649
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatct 249  Q
    ||||||||||||||||||||| ||||||||||||||    
T  1489684 gagaaatgatatttatacaactattttgtgacatct 1489649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 246
Target Start/End: Complemental strand, 17267721 - 17267691
Alignment:
Q  216 gaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||||||||||||||||||||    
T  17267721 gaaatgatatttatacaaccattttgtgaca 17267691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 28165126 - 28165168
Alignment:
Q  211 tttgagaaatgatatttatacaaccattttgtgacatctttta 253  Q
    |||||||||||||| || |||||||||||||||||| ||||||    
T  28165126 tttgagaaatgatacttgtacaaccattttgtgacaactttta 28165168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 36909914 - 36909876
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  36909914 gagaaatgatatttgtacaaccattttgtgacaactttt 36909876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 3299176 - 3299135
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttttaaa 255  Q
    |||||||||||||| |||||||||||| ||||| ||||||||    
T  3299176 gagaaatgatatttgtacaaccattttatgacaacttttaaa 3299135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 4344448 - 4344481
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgaca 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  4344448 tgagaaatgatatttgtacaaccattttgtgaca 4344481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 29795447 - 29795484
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  29795447 gagaaatgatatttgtacaaccattttgtgacaacttt 29795484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 9834141 - 9834109
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    ||||||||||||||||||||||||||| |||||    
T  9834141 gagaaatgatatttatacaaccattttatgaca 9834109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 30487542 - 30487502
Alignment:
Q  212 ttgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||||| |||||||| ||||||||| |||||    
T  30487542 ttgagaaatgatatttgtacaaccaatttgtgacaactttt 30487502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 30856806 - 30856846
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatctttta 253  Q
    ||||||||||||||| |||||||| ||||||||| ||||||    
T  30856806 tgagaaatgatatttgtacaaccactttgtgacaactttta 30856846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 31296916 - 31296884
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  31296916 gagaaatgatatttgtacaaccattttgtgaca 31296884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 33002819 - 33002851
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||||||||||||||| ||||||    
T  33002819 gagaaatgatatttatacaaccatttagtgaca 33002851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 35171297 - 35171265
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  35171297 gagaaatgatatttgtacaaccattttgtgaca 35171265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 29376787 - 29376748
Alignment:
Q  213 tgagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  29376787 tgagaaatgatatttttacaaccattttgtgacaactttt 29376748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 3339570 - 3339532
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatctttt 252  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  3339570 gagaaatgatatttgtacaaccattttgtgacaactttt 3339532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 8684024 - 8684082
Alignment:
Q  82 aaaacaaaccactgaccacatgtttaa-gaggcacaaatctcttaccacttggactaat 139  Q
    ||||||||||  ||||||||||||||| ||| | |||| ||||||||||||||||||||    
T  8684024 aaaacaaacccatgaccacatgtttaaagagacccaaaactcttaccacttggactaat 8684082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 32621802 - 32621840
Alignment:
Q  215 agaaatgatatttatacaaccattttgtgacatctttta 253  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  32621802 agaaatgatatttatacaaccattttatgacaactttta 32621840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 30945823 - 30945860
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgacatcttt 251  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  30945823 gagaaatgatatttatacaatcattttgtgacaacttt 30945860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 11785355 - 11785387
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||| ||||||||||||||||||    
T  11785355 gagaaatgatatttgtacaaccattttgtgaca 11785387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 1073 - 1119
Alignment:
Q  209 aatttgagaaatgatatttatacaaccattttgtgacatcttttaaa 255  Q
    |||| |||||||||||||| |||||| ||||||||||| ||||||||    
T  1073 aattagagaaatgatatttgtacaactattttgtgacaacttttaaa 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 21522 - 21490
Alignment:
Q  208 aaatttgagaaatgatatttatacaaccatttt 240  Q
    |||||||||||||||||||| ||||||||||||    
T  21522 aaatttgagaaatgatatttgtacaaccatttt 21490  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 36024 - 35992
Alignment:
Q  214 gagaaatgatatttatacaaccattttgtgaca 246  Q
    |||||||||||||||||||||||||| ||||||    
T  36024 gagaaatgatatttatacaaccatttcgtgaca 35992  T

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