View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13813_low_10 (Length: 250)
Name: NF13813_low_10
Description: NF13813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13813_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 52631198 - 52631442
Alignment:
| Q |
1 |
caagcccctagctacgtgcatgtgcgacccatatgtaattagctagaaaagattaataagaaaagtgggttatagaaagaaaaaatgttgggaaactagg |
100 |
Q |
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| T |
52631198 |
caagcccctagctacgtgcatgtgcgacccatatgtaattagctagaaaagattaataagaaaagtgggttatagaaagaaaaaatgttgggaaactagg |
52631297 |
T |
|
| Q |
101 |
tccaaagagaacaaaatcttggagcagcgttgtgttgtggattgacgtaagcaggattttcactttaaagattttgtacgaaagccaatttgcagaaatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52631298 |
tccaaagagaacaaaatcttggagcagcgttgtgttgtggattgacgtaagcaggattttcactttaaagattttgtacgaaagccaatttgcagaaatg |
52631397 |
T |
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| Q |
201 |
agataaaagaagattcttgctgctcggtctcactttcttctctct |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52631398 |
agataaaagaagattcttgctgctcggtctcactttcttctctct |
52631442 |
T |
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