View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13814_high_53 (Length: 215)
Name: NF13814_high_53
Description: NF13814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13814_high_53 |
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Alignment Details
Target: chr5 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 90 - 191
Target Start/End: Original strand, 5416804 - 5416905
Alignment:
| Q |
90 |
actacactggtcaacacttattaaaagaacatatgtgatatacatgacatatatttgtctgtgcattatttgttttgttgttatgttttggagacattta |
189 |
Q |
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| T |
5416804 |
actacactggtcaacatttattaaaagaacatttgtgatatacatgacatatatttgtctgtgcattatttgttttgttgttatgttttggagacattta |
5416903 |
T |
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| Q |
190 |
gt |
191 |
Q |
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|| |
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| T |
5416904 |
gt |
5416905 |
T |
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