View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13814_high_9 (Length: 531)
Name: NF13814_high_9
Description: NF13814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13814_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 482; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 1 - 514
Target Start/End: Original strand, 7750235 - 7750748
Alignment:
| Q |
1 |
gataaaaaacatgtgaatcaaaattgaaccaccttttgggaattgggccacaaagcctattgaaactaacatcaaggtttgttaggctcttggggaattt |
100 |
Q |
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| T |
7750235 |
gataaaaaacatgtgaatcaaaattgaaccaccttttgggaattgggccacaaagcctattgaaactaacatcaaggtttgttaggctcttggggaattc |
7750334 |
T |
|
| Q |
101 |
gggtattgaaccagtgagcttgttatgggagacatcaagaagagacagagccggcaggtttccgagagaggcctgaattgggccagaaaaacggttattt |
200 |
Q |
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| T |
7750335 |
gggtattgaaccagtgagcttgttatgggagacatcaagaagagacagagccggcaggtttccgagagaggccggaattgggccagaaaaacggttattt |
7750434 |
T |
|
| Q |
201 |
gctaggacgattaaggtgaggttttttaaacggcccaagaacgatggaattggtccactaagtctgtttgtgtccagcacaaggaggttaaggtttgtca |
300 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
7750435 |
gctaggacgattaaggtgagcttttttaaacggcccaagaacgatggaattggtccactaagtctgtttgtgtcgagcacaaggaggttaaggtttgtca |
7750534 |
T |
|
| Q |
301 |
gcttgctcaaggaatttggtattgtaccggtgagatggtttgcgcgaagattgagattattaagtctagacagttgaccaagagatgacggtatagagcc |
400 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
7750535 |
gcttgctcaaggaattcggtattgtaccggtgagatggtttgcgcgaaggttgagattattaagtctagacagttgaccaagagatgatggtatagagcc |
7750634 |
T |
|
| Q |
401 |
agaaaatctgttggcgtaaagcatgagccctgttagcctcttgagccggcccagggagggtgggattgggccggaaagtttgtttgctccaaaggtaatg |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
7750635 |
agaaaatctgttggcgtaaagcatgagccctgttagcctcttgagccggcccagggagggtgggattgggccggaaagtttgtttgctccaaagttaatg |
7750734 |
T |
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| Q |
501 |
ctaatgaggttcgt |
514 |
Q |
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|||||||||||||| |
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| T |
7750735 |
ctaatgaggttcgt |
7750748 |
T |
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