View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13814_low_37 (Length: 300)
Name: NF13814_low_37
Description: NF13814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13814_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 18 - 290
Target Start/End: Complemental strand, 32483497 - 32483222
Alignment:
| Q |
18 |
tgtgttgttgcaattgatcatttttaccatttcaatcaattttggtattacgacaagtttatggtgtttatacatattttacatgaagaaaaaatatcat |
117 |
Q |
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| T |
32483497 |
tgtgttgttgcaattgatcatttttaccatttcaatcaattttggtattatgacaagtttatggtgtttatacatattttacatgaagaaaaaatatcat |
32483398 |
T |
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| Q |
118 |
aatttgaaaaggcaaaaattagagtaacagttttattcaaggattcttgataattgaagtgtggtttcggtatttatttgtgttg----ttgattgagtt |
213 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
32483397 |
aatttgaaaaggcaaaaattagagtaacag-tttattcaaggattcttgataattgaagtgtggtttcggtatttatttgtgttgttgattgattgagtt |
32483299 |
T |
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| Q |
214 |
caaggattattcaagaagtaggtgttactttactcataaaagtatatttcatggtattttcttttgtctttctctat |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32483298 |
caaggattattcaagaagtaggtgttactttactcataaaagtatatttcatggtattttcttttgtctttctctat |
32483222 |
T |
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