View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13817_low_6 (Length: 428)

Name: NF13817_low_6
Description: NF13817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13817_low_6
NF13817_low_6
[»] chr4 (28 HSPs)
chr4 (1-414)||(54990206-54990618)
chr4 (1-231)||(8979863-8980093)
chr4 (1-231)||(8984983-8985213)
chr4 (1-231)||(13700797-13701027)
chr4 (1-231)||(21304531-21304761)
chr4 (1-231)||(54991763-54991993)
chr4 (1-231)||(21299411-21299641)
chr4 (1-231)||(39999409-39999638)
chr4 (1-231)||(40004367-40004596)
chr4 (1-231)||(54343543-54343772)
chr4 (1-231)||(54348697-54348926)
chr4 (1-201)||(36359668-36359868)
chr4 (1-231)||(36354482-36354710)
chr4 (80-231)||(53798329-53798480)
chr4 (80-231)||(41393858-41394009)
chr4 (80-234)||(51018699-51018853)
chr4 (80-231)||(9763269-9763420)
chr4 (80-231)||(13695757-13695908)
chr4 (80-231)||(13711370-13711521)
chr4 (80-231)||(4207042-4207192)
chr4 (80-200)||(47045647-47045767)
chr4 (1-69)||(13695435-13695503)
chr4 (1-69)||(9763771-9763839)
chr4 (1-69)||(41393516-41393584)
chr4 (1-69)||(53797902-53797970)
chr4 (1-69)||(13710942-13711010)
chr4 (1-69)||(47046060-47046128)
chr4 (1-69)||(51019127-51019195)
[»] chr7 (29 HSPs)
chr7 (1-231)||(33238342-33238572)
chr7 (1-231)||(33243519-33243749)
chr7 (1-201)||(47994140-47994340)
chr7 (1-201)||(47999315-47999515)
chr7 (80-231)||(21080317-21080468)
chr7 (80-232)||(2233947-2234099)
chr7 (80-233)||(19308870-19309023)
chr7 (80-231)||(32211961-32212112)
chr7 (80-231)||(42572600-42572751)
chr7 (80-231)||(12935084-12935235)
chr7 (80-231)||(17496100-17496251)
chr7 (80-231)||(17556963-17557114)
chr7 (80-231)||(47176492-47176643)
chr7 (87-201)||(16538699-16538813)
chr7 (87-201)||(16626849-16626963)
chr7 (80-231)||(43893542-43893693)
chr7 (148-231)||(47544745-47544828)
chr7 (1-69)||(16539166-16539234)
chr7 (1-69)||(16626428-16626496)
chr7 (1-69)||(2234384-2234452)
chr7 (1-69)||(19309365-19309433)
chr7 (1-69)||(12934670-12934738)
chr7 (1-69)||(17495676-17495744)
chr7 (1-69)||(17557470-17557538)
chr7 (1-69)||(21080793-21080861)
chr7 (1-69)||(42572218-42572286)
chr7 (1-69)||(43893142-43893210)
chr7 (311-363)||(44823939-44823991)
chr7 (1-69)||(47176904-47176972)
[»] chr6 (19 HSPs)
chr6 (1-231)||(22697768-22697998)
chr6 (1-231)||(22702944-22703174)
chr6 (1-231)||(21402028-21402258)
chr6 (57-231)||(29490808-29490982)
chr6 (80-231)||(2817397-2817548)
chr6 (80-231)||(34142781-34142932)
chr6 (80-231)||(34155397-34155548)
chr6 (80-231)||(6727773-6727924)
chr6 (80-231)||(34376464-34376615)
chr6 (80-233)||(31983475-31983628)
chr6 (80-231)||(24190650-24190802)
chr6 (1-69)||(31981836-31981904)
chr6 (1-69)||(34376202-34376270)
chr6 (1-69)||(24191126-24191194)
chr6 (1-69)||(24192223-24192291)
chr6 (5-40)||(29491005-29491040)
chr6 (21-69)||(6728193-6728241)
chr6 (1-57)||(34142362-34142418)
chr6 (1-57)||(34154978-34155034)
[»] chr5 (19 HSPs)
chr5 (1-231)||(17510345-17510575)
chr5 (1-231)||(42019860-42020090)
chr5 (1-232)||(42024640-42024871)
chr5 (1-201)||(17505240-17505440)
chr5 (5-201)||(43579951-43580147)
chr5 (1-231)||(41858873-41859102)
chr5 (91-201)||(41853846-41853956)
chr5 (80-200)||(1413100-1413220)
chr5 (80-231)||(24770601-24770752)
chr5 (107-234)||(26709715-26709842)
chr5 (107-234)||(26979449-26979576)
chr5 (80-231)||(36254517-36254668)
chr5 (80-231)||(24776055-24776206)
chr5 (1-69)||(26709376-26709444)
chr5 (1-69)||(26979110-26979178)
chr5 (1-69)||(1413806-1413874)
chr5 (1-69)||(24776563-24776631)
chr5 (1-69)||(24771108-24771176)
chr5 (1-69)||(36254109-36254177)
[»] chr1 (14 HSPs)
chr1 (1-231)||(27711610-27711840)
chr1 (1-201)||(34317840-34318040)
chr1 (1-231)||(37403995-37404226)
chr1 (1-231)||(37409114-37409345)
chr1 (1-201)||(36684270-36684470)
chr1 (1-230)||(11250701-11250931)
chr1 (1-201)||(27716730-27716930)
chr1 (80-231)||(5725365-5725516)
chr1 (80-231)||(3585301-3585452)
chr1 (80-231)||(5730771-5730922)
chr1 (80-235)||(48245964-48246119)
chr1 (142-232)||(50958977-50959069)
chr1 (1-69)||(5730378-5730446)
chr1 (1-69)||(3584874-3584942)
[»] scaffold0517 (1 HSPs)
scaffold0517 (1-231)||(3850-4081)
[»] chr3 (22 HSPs)
chr3 (1-231)||(20090187-20090417)
chr3 (1-231)||(20095312-20095542)
chr3 (1-231)||(15762556-15762785)
chr3 (1-231)||(15767717-15767946)
chr3 (1-201)||(55129077-55129276)
chr3 (1-231)||(17369006-17369236)
chr3 (80-231)||(3481645-3481796)
chr3 (80-234)||(34128402-34128558)
chr3 (80-231)||(17358566-17358716)
chr3 (80-231)||(30338096-30338247)
chr3 (80-231)||(30341200-30341351)
chr3 (80-231)||(54271312-54271463)
chr3 (80-234)||(3476185-3476339)
chr3 (80-231)||(4116946-4117097)
chr3 (1-69)||(17358111-17358179)
chr3 (1-69)||(54270918-54270986)
chr3 (1-69)||(3482166-3482234)
chr3 (1-69)||(4117345-4117413)
chr3 (1-69)||(10321716-10321784)
chr3 (1-69)||(30338506-30338574)
chr3 (1-69)||(34128923-34128991)
chr3 (1-69)||(3476699-3476767)
[»] scaffold0055 (1 HSPs)
scaffold0055 (1-201)||(3364-3564)
[»] scaffold0052 (1 HSPs)
scaffold0052 (1-201)||(80971-81171)
[»] chr8 (13 HSPs)
chr8 (1-201)||(32010866-32011066)
chr8 (1-232)||(32016040-32016270)
chr8 (1-231)||(2165390-2165621)
chr8 (80-231)||(43998542-43998693)
chr8 (80-234)||(17955127-17955281)
chr8 (80-231)||(42513844-42513995)
chr8 (80-201)||(24885324-24885445)
chr8 (80-231)||(21641123-21641273)
chr8 (1-69)||(24884986-24885054)
chr8 (1-69)||(21643835-21643903)
chr8 (1-69)||(21643020-21643088)
chr8 (1-69)||(21643395-21643463)
chr8 (1-61)||(42514182-42514242)
[»] chr2 (13 HSPs)
chr2 (1-201)||(42728175-42728375)
chr2 (1-200)||(42723007-42723206)
chr2 (5-232)||(40392610-40392837)
chr2 (7-234)||(44754129-44754355)
chr2 (1-231)||(44096642-44096871)
chr2 (7-231)||(44759298-44759521)
chr2 (6-198)||(40519925-40520122)
chr2 (1-201)||(40518075-40518280)
chr2 (80-231)||(4162891-4163042)
chr2 (80-234)||(28751014-28751168)
chr2 (1-69)||(4163331-4163399)
chr2 (311-360)||(43727791-43727840)
chr2 (1-69)||(28751483-28751551)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-201)||(31885-32085)
scaffold0014 (1-201)||(26713-26913)
[»] scaffold0594 (2 HSPs)
scaffold0594 (80-231)||(8530-8681)
scaffold0594 (1-69)||(8962-9030)
[»] scaffold0166 (4 HSPs)
scaffold0166 (80-231)||(12982-13133)
scaffold0166 (80-231)||(18439-18590)
scaffold0166 (1-69)||(13493-13561)
scaffold0166 (1-69)||(18946-19014)
[»] scaffold0060 (2 HSPs)
scaffold0060 (80-138)||(37654-37712)
scaffold0060 (1-69)||(37283-37351)


Alignment Details
Target: chr4 (Bit Score: 345; Significance: 0; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 1 - 414
Target Start/End: Complemental strand, 54990618 - 54990206
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54990618 aaacaagagaagagtatttgattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 54990519  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  54990518 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgttaacattccaaaggctccacaaactcactagtatactccaa 54990419  T
Q  201 gnnnnnnncattatacactagtgttccaacatattcgtacaaccaaatttaagtggttaaatttagacaaccgagtatgtccattaaccatctaatcaac 300  Q
    |       ||||||||| ||||||||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||||||||||||||||||||||||    
T  54990418 gtttttttcattatacattagtgttccaacatattcgtacaaccaaa-ttatgtggctaaatttagacaactgagtatgtccattaaccatctaatcaac 54990320  T
Q  301 gtaattagctacttagattgttgtcacaaaaattgtcaaattttatttcttcaaataacacaattgtaagttaaaatgcgaggaatgggatcattaaaag 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  54990319 gtaattagctacttagattgttgtcacaaaaattgtcaaattttagttcttcaaataacacaattgtaagttaaaatgcgaggaatgggatcatcaaaag 54990220  T
Q  401 gatgaagtacttac 414  Q
    ||||||||||||||    
T  54990219 gatgaagtacttac 54990206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 8980093 - 8979863
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||     
T  8980093 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattctcgagctctcaatttataaggaggatttctactagagtgtgtgatctac 8979994  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8979993 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 8979894  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  8979893 gtttttttcattatacactagtgttccaaca 8979863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 8985213 - 8984983
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  8985213 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 8985114  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985113 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 8985014  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  8985013 gtttttttcattatacactagtgttccaaca 8984983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 13700797 - 13701027
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  13700797 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 13700896  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700897 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 13700996  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  13700997 gtttttttcattatacactagtgttccaaca 13701027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 21304761 - 21304531
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  21304761 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 21304662  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304661 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 21304562  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  21304561 gtttttttcattatacactagtgttccaaca 21304531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 54991763 - 54991993
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  54991763 aaaccagagaagagtattcgattctcagttttgaagtgaagaatactattcccgagctttcaatttataaggaggatttctactagagtgtgtgatctat 54991862  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991863 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 54991962  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  54991963 gtttttttcattatacactagtgttccaaca 54991993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 21299641 - 21299411
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  21299641 aaaccagagaagagtattcgattctcagttttggagtaaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 21299542  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21299541 ccgatgtgggacataaaattttcaattcacactttacactagtttcttcatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 21299442  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  21299441 gtttttttcattatacactagtgttccaaca 21299411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 39999409 - 39999638
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  39999409 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 39999508  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  39999509 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccacaaactcactagtatactccaa 39999608  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  39999609 g-ttttttcattatacactagtgttccaaca 39999638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 40004367 - 40004596
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  40004367 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 40004466  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  40004467 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccacaaactcactagtatactccaa 40004566  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  40004567 g-ttttttcattatacactagtgttccaaca 40004596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 54343543 - 54343772
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  54343543 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 54343642  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  54343643 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccacaaactcactagtatactccaa 54343742  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  54343743 g-ttttttcattatacactagtgttccaaca 54343772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 54348697 - 54348926
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  54348697 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 54348796  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  54348797 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccacaaactcactagtatactccaa 54348896  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  54348897 g-ttttttcattatacactagtgttccaaca 54348926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 36359668 - 36359868
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||     
T  36359668 aaaccagagaagagtattcgattctcagttttggagtaaagaatactattcctgagctctcaatttataaggagaatttctactagagtgtgtgatctac 36359767  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  36359768 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgttaacatttcaaaggctccacaaactcactagtatactccaa 36359867  T
Q  201 g 201  Q
    |    
T  36359868 g 36359868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 36354482 - 36354710
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||||||  | ||||||||||||||||| ||| ||||||||||||||||||||||||     
T  36354482 aaaccagagaagagtattcgattctcagttttggagtaaagaatactatttctgagctctcaatttataaagaggatttctactagagtgtgtgatctac 36354581  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  36354582 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgttaacattccaaaggctccacaaattcactagtatactccaa 36354681  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  36354682 g--tttttcattatacactagtgttccaaca 36354710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 53798329 - 53798480
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  53798329 ctactagagtgtgtgatctacccaatgtaggacataaaattttcaattcacactttacactagtttctccattcttgtgtttacattccaaaggctccac 53798428  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    ||||  ||||||||||||||||       || ||||||||| ||||||||||    
T  53798429 aaaccaactagtatactccaagttttttccaatatacactaatgttccaaca 53798480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 41393858 - 41394009
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  41393858 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttttccatccttgtgtttacattccaaaggcttcac 41393957  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  41393958 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 41394009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 51018853 - 51018699
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||    
T  51018853 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtgtacattccaaagtctccac 51018754  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaacatat 234  Q
    | |   ||||||||| ||||||       || |||||||||||||| ||||||||    
T  51018753 ataacaactagtatattccaagtttttgccaatatacactagtgtttcaacatat 51018699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 9763420 - 9763269
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    ||||||||||||||||||||  | || |||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  9763420 ctactagagtgtgtgatctactcaatgtgggacataaaattttcaattcatgctttacactagtttctacatccttgtgtttacattccaaagtctccac 9763321  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  9763320 ataacaactagtatactccaagtttatgccaatatacactagtgttccaaca 9763269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 13695757 - 13695908
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  13695757 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 13695856  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  13695857 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 13695908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 13711370 - 13711521
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  13711370 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 13711469  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  13711470 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 13711521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 4207042 - 4207192
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| | |||| |    
T  4207042 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtg-ttacattccaatgtctcctc 4207140  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  4207141 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 4207192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 47045767 - 47045647
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||   || |||||||||||||| || | |||| |    
T  47045767 ctactagagtgtgtgatctatccaatgtgggacataaaattttcaattcacactttacactagtttctatttcattgtgtttacattctaatgtctcctc 47045668  T
Q  180 aaactcactagtatactccaa 200  Q
    | |   |||||||||||||||    
T  47045667 ataacaactagtatactccaa 47045647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13695435 - 13695503
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    ||||||||||||||||||  |||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  13695435 aaaccagagaagagtattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 13695503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9763839 - 9763771
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||||| |  ||||||||||| |||||||    
T  9763839 aaaccagagaagaggattcgattctcggttttggagtgaagaataccaatcccgagctctctatttata 9763771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 41393516 - 41393584
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  41393516 aaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 41393584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 53797902 - 53797970
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| |||  ||||||||||| |||||||    
T  53797902 aaaccagagaagaggattcgattctcggttttggagtgaagaatgctaatcccgagctctctatttata 53797970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13710942 - 13711010
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||  ||||||||||||||||| | || ||||||||||| |||||||    
T  13710942 aaaccagagaagaggattcgattcttggttttggagtgaagaatcccattcccgagctctctatttata 13711010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47046128 - 47046060
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||  |||  |||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  47046128 aaaccagagaagatgattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 47046060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 51019195 - 51019127
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | || |||||| |||| |||||||    
T  51019195 aaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgaggtctctatttata 51019127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-100; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 33238342 - 33238572
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  33238342 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 33238441  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238442 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 33238541  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  33238542 gtttttttcattatacactagtgttccaaca 33238572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 33243519 - 33243749
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  33243519 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 33243618  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33243619 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacatgccaaaggctccacaaactcactagtatactccaa 33243718  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  33243719 gtttttttcattatacactagtgttccaaca 33243749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 47994140 - 47994340
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  47994140 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 47994239  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47994240 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 47994339  T
Q  201 g 201  Q
    |    
T  47994340 g 47994340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 47999315 - 47999515
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  47999315 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 47999414  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  47999415 ccgatgtgagacataaaattttcaattcacactttacactagtttctccatccttatgtttacattccaaaggctccacaaactcactaatatactccaa 47999514  T
Q  201 g 201  Q
    |    
T  47999515 g 47999515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 21080468 - 21080317
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21080468 ctactagagtgtgtgatctacccaacgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 21080369  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    ||||  ||||||||||||||||       |||||||||||||||||||||||    
T  21080368 aaaccaactagtatactccaagttttttccattatacactagtgttccaaca 21080317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 2234099 - 2233947
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2234099 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttcttcatccttgtgtttacattccaaaggctccac 2234000  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaacat 232  Q
    ||||  ||||||||||||||||       || |||||||||| ||||||||||    
T  2233999 aaaccaactagtatactccaagttttttccaatatacactagggttccaacat 2233947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 80 - 233
Target Start/End: Complemental strand, 19309023 - 19308870
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  19309023 ctactagagtgtgtgatctatccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccac 19308924  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaacata 233  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||||    
T  19308923 ataacaactagtatactccaagtttttgccaatatacactagtgttccaacata 19308870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 32212112 - 32211961
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  32212112 ctactagagtgtgtgatctacccaatgtgagacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaagtctcaac 32212013  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  32212012 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 32211961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 42572600 - 42572751
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  42572600 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccac 42572699  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  42572700 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 42572751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 12935084 - 12935235
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||| ||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  12935084 ctactaaagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccac 12935183  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  12935184 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 12935235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 17496100 - 17496251
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  17496100 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccac 17496199  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || |||| |||||||||||||||    
T  17496200 ataacaactagtatactccaagtttttgccaatatatactagtgttccaaca 17496251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 17557114 - 17556963
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||    
T  17557114 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacatttcaaagtctccac 17557015  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || |||| |||||||||||||||    
T  17557014 ataacaactagtatactccaagtttttgccaatatatactagtgttccaaca 17556963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 47176643 - 47176492
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  47176643 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 47176544  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  47176543 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 47176492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 16538813 - 16538699
Alignment:
Q  87 agtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactca 186  Q
    |||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |   |    
T  16538813 agtgtgtgatctactcaatatgggacataaaattttcaattcacactttacactagtttctacatccttgtgtctacattccaaagtctccacataacaa 16538714  T
Q  187 ctagtatactccaag 201  Q
    |||||||||||||||    
T  16538713 ctagtatactccaag 16538699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 16626849 - 16626963
Alignment:
Q  87 agtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactca 186  Q
    |||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |   |    
T  16626849 agtgtgtgatctactcaatatgggacataaaattttcaattcacactttacactagtttctacatccttgtgtctacattccaaagtctccacataacaa 16626948  T
Q  187 ctagtatactccaag 201  Q
    |||||||||||||||    
T  16626949 ctagtatactccaag 16626963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 43893542 - 43893693
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || ||  |||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| | |||| |    
T  43893542 ctactagagtgtgtgatctacccaatgagggacataaaattttcaattcacactttacgctagtttctacatcattgtgtttacattccaatgtctcctc 43893641  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  43893642 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 43893693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 148 - 231
Target Start/End: Complemental strand, 47544828 - 47544745
Alignment:
Q  148 ccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||       |||||||||||||||||||||||    
T  47544828 ccatccttgtgtttacattccaaaggctccacaaactctctagtatactccaagtttttttcattatacactagtgttccaaca 47544745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16539234 - 16539166
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  16539234 aaaccagagaagaggatttaattctcggttttggagtgaagaatcccattcccgagctctctatttata 16539166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16626428 - 16626496
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  16626428 aaaccagagaagaggatttaattctcggttttggagtgaagaatcccattcccgagctctctatttata 16626496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2234452 - 2234384
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| |||||||||||||||||||||  ||||||||||| |||||||    
T  2234452 aaaccagagaagaggattcgattctcggttttggagtgaagaatactaatcccgagctctctatttata 2234384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19309433 - 19309365
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||| |||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  19309433 aaaccagagaagaggatttgattctcggttttggagtgaagaatcccattcccgagctctctatttata 19309365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12934670 - 12934738
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  12934670 aaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 12934738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17495676 - 17495744
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| ||| ||||||| |||||||||| |||||| | || ||||||||||| |||||||    
T  17495676 aaaccagagaagaggattcaattctcggttttggagtaaagaatcccattcccgagctctctatttata 17495744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17557538 - 17557470
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| ||| ||||||| |||||||||| |||||| | || ||||||||||| |||||||    
T  17557538 aaaccagagaagaggattcaattctcggttttggagtaaagaatcccattcccgagctctctatttata 17557470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21080861 - 21080793
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  ||||||||||||| |||||||||| | |  ||||||||||| |||||||    
T  21080861 aaaccagagaagaggattcgattctcagttttgaagtgaagaatgcaaatcccgagctctctatttata 21080793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42572218 - 42572286
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | || |||||| |||| |||||||    
T  42572218 aaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgagttctctatttata 42572286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43893142 - 43893210
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  ||||||  |||||||||||||||| | || ||||||||||| |||||||    
T  43893142 aaaccagagaagaggattcgattctcgattttggagtgaagaatcccattcccgagctctctatttata 43893210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 44823991 - 44823939
Alignment:
Q  311 acttagattgttgtcacaaaaattgtcaaattttatttcttcaaataacacaa 363  Q
    ||||||||||||||| ||||| ||||| ||||||  || ||||||||||||||    
T  44823991 acttagattgttgtcgcaaaagttgtctaatttttgttattcaaataacacaa 44823939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 47176972 - 47176904
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  ||| || |||||||||||||||||   || ||||||||||| |||||||    
T  47176972 aaaccagagaagaggattcgattatcggttttggagtgaagaatctcattcccgagctctctatttata 47176904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-100; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 22697998 - 22697768
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  22697998 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 22697899  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697898 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 22697799  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  22697798 gtttttttcattatacactagtgttccaaca 22697768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 22703174 - 22702944
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  22703174 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 22703075  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703074 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 22702975  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  22702974 gtttttttcattatacactagtgttccaaca 22702944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 21402028 - 21402258
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    |||||| |||||||||||  ||||| |||||| |||||| ||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||     
T  21402028 aaaccaaagaagagtattcgattcttagtttttgagtgatgaatactattcccaagctctcaatttataaggaggatttctactagagtgtgtgatctac 21402127  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21402128 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactactatactccaa 21402227  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  21402228 gtttttttcattatacactagtgttccaaca 21402258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 57 - 231
Target Start/End: Complemental strand, 29490982 - 29490808
Alignment:
Q  57 ctctcaatttataaggagaatttctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttg 156  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29490982 ctctcaatttataaggaggatttctactagagtgtgtgatctacccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttg 29490883  T
Q  157 tgtttacattccaaaggctccacaaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    ||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  29490882 tgtttacattccaaaagctccacaaactcactagtatactccaagtttttttcattatacactagtgttccaaca 29490808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 2817548 - 2817397
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2817548 ctactagagtgtgtgatctacccaatgtgggacattaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 2817449  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  2817448 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 2817397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 34142781 - 34142932
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  34142781 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccac 34142880  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  34142881 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 34142932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 34155397 - 34155548
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  34155397 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccac 34155496  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  34155497 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 34155548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 6727924 - 6727773
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  6727924 ctactagagtgtgtgatctacccaatgtggaacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 6727825  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  6727824 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 6727773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 34376464 - 34376615
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  34376464 ctactagagtgtgttatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 34376563  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  34376564 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 34376615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 80 - 233
Target Start/End: Original strand, 31983475 - 31983628
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || ||  |||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| | |||| |    
T  31983475 ctactagagtgtgtgatctacccaatgcgggacataaaattttcaattcacactttacactaatttctacatcattgtgtttacattccaatgtctcctc 31983574  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaacata 233  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||||    
T  31983575 ataaaaactagtatactccaagtttttgccaatatacactagtgttccaacata 31983628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 24190802 - 24190650
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaa-ttttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctcca 178  Q
    |||||||||||||||||||| || || |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||| | ||||     
T  24190802 ctactagagtgtgtgatctacccaatgtgggacataaaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcct 24190703  T
Q  179 caaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    || |   ||||||||||||||||       || ||||||||||||||||||||    
T  24190702 cataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 24190650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31981836 - 31981904
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    ||||||||||||||||||  |||||| ||||||||||||||||||| |  ||||||||||| |||||||    
T  31981836 aaaccagagaagagtattcgattctcggttttggagtgaagaataccaatcccgagctctctatttata 31981904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34376202 - 34376270
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  34376202 aaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 34376270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24191194 - 24191126
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||  ||||||||||||||||| | || ||||||||||| |||||||    
T  24191194 aaaccagagaagaggattcgattcttggttttggagtgaagaatcccattcccgagctctctatttata 24191126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24192291 - 24192223
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||  ||||||||||||||||| | || ||||||||||| |||||||    
T  24192291 aaaccagagaagaggattcgattcttggttttggagtgaagaatcccattcccgagctctctatttata 24192223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 29491040 - 29491005
Alignment:
Q  5 cagagaagagtatttaattctcagttttggagtgaa 40  Q
    ||||||||||||||| ||||||||||||||||||||    
T  29491040 cagagaagagtatttgattctcagttttggagtgaa 29491005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 6728241 - 6728193
Alignment:
Q  21 attctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  6728241 attctcggttttggagtgaagaatcccattcccgagctctctatttata 6728193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 34142362 - 34142418
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagc 57  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | || |||||||    
T  34142362 aaaccagagaagaggattcgattctcggttttggagtgaagaatccaattcccgagc 34142418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 34154978 - 34155034
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagc 57  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | || |||||||    
T  34154978 aaaccagagaagaggattcgattctcggttttggagtgaagaatccaattcccgagc 34155034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 186; Significance: 1e-100; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 17510345 - 17510575
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  17510345 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 17510444  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510445 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 17510544  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  17510545 gtttttttcattatacactagtgttccaaca 17510575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 42019860 - 42020090
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42019860 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctat 42019959  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019960 ccgatgtgggacataaaattttcaattcacattttacattagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 42020059  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  42020060 gtttttttcattatacactagtgttccaaca 42020090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 42024640 - 42024871
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42024640 aaaccagagaagagtattcgattctcaattttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctat 42024739  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  42024740 ccgatgtgggacataaaattttcaattcacattttacactagtttctccatccttatgtttacattccaaaggctccacaaactcactagtatacttcaa 42024839  T
Q  201 gnnnnnnncattatacactagtgttccaacat 232  Q
    |       ||||||||||||||||||||||||    
T  42024840 gtttttttcattatacactagtgttccaacat 42024871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 17505240 - 17505440
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  17505240 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 17505339  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17505340 ccgatgtgggacataaaattttcaattcacactttacaatagtttttccatccttgtgtttacattccaaaggctccacaaactcactagtatattccaa 17505439  T
Q  201 g 201  Q
    |    
T  17505440 g 17505440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 43579951 - 43580147
Alignment:
Q  5 cagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctatccga 104  Q
    ||||||||||||||  |||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  43579951 cagagaagagtattcgattctcagttttggtgtgaaaaatactattcccgagctctcaatttataaggaggatttctactagagtatgtgatctacccga 43580050  T
Q  105 tatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 201  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43580051 tgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaag 43580147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 41858873 - 41859102
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||     
T  41858873 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggagaatttctactagagtgtg--atctac 41858970  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41858971 ccgatgtgggacatagaattttcaattcacactttacactaatttttccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 41859070  T
Q  201 g-nnnnnnncattatacactagtgttccaaca 231  Q
    |        |||||||||||||||||||||||    
T  41859071 gtttttttccattatacactagtgttccaaca 41859102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 41853846 - 41853956
Alignment:
Q  91 tgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactag 190  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41853846 tgtgatctacccgatgtgggacatagaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactccctag 41853945  T
Q  191 tatactccaag 201  Q
    |||||||||||    
T  41853946 tatactccaag 41853956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 1413220 - 1413100
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    ||||||||||||||||||||  | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1413220 ctactagagtgtgtgatctactcaatgtgggacataaaattttcaattcacactttacactagtttcttcatccttgtgtttacattccaaaggctccac 1413121  T
Q  180 aaactcactagtatactccaa 200  Q
    | |   |||||||||||||||    
T  1413120 ataacaactagtatactccaa 1413100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 24770752 - 24770601
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  24770752 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 24770653  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  24770652 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 24770601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 107 - 234
Target Start/End: Original strand, 26709715 - 26709842
Alignment:
Q  107 tgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnn 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||| |||          
T  26709715 tgggacataaaattttcaattcacactttacactagtttctccattcttgtgtttacattccataggctccacaaaccaactagtatacttcaaattttt 26709814  T
Q  207 nncattatacactagtgttccaacatat 234  Q
      |||||||||||| |||||||||||||    
T  26709815 tccattatacactaatgttccaacatat 26709842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 107 - 234
Target Start/End: Original strand, 26979449 - 26979576
Alignment:
Q  107 tgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnn 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||| |||          
T  26979449 tgggacataaaattttcaattcacactttacactagtttctccattcttgtgtttacattccataggctccacaaaccaactagtatacttcaaattttt 26979548  T
Q  207 nncattatacactagtgttccaacatat 234  Q
      |||||||||||| |||||||||||||    
T  26979549 tccattatacactaatgttccaacatat 26979576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 36254517 - 36254668
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||    
T  36254517 ctactagagtgtgtgatctacccaatgtggaacataaaattttcaattcacactttacactagtttctacatccttgtgtttacattccaatgtctccac 36254616  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || |||||||||||||| |||||    
T  36254617 ataacaactagtatactccaagtttttgccaatatacactagtgtttcaaca 36254668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 24776206 - 24776055
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| | |||| |    
T  24776206 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttatactagtttctacatcattgtgtttacattccaatgtctcctc 24776107  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   |||||||||||| |||       || ||||||||||||||||||||    
T  24776106 ataacaactagtatactcaaagtttttgccaatatacactagtgttccaaca 24776055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26709376 - 26709444
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||| | |  ||||||||||| |||||||    
T  26709376 aaaccaaagaagaggattcaattctcagttttggagtgaagaatgcaaatcccgagctctctatttata 26709444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26979110 - 26979178
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||| | |  ||||||||||| |||||||    
T  26979110 aaaccaaagaagaggattcaattctcagttttggagtgaagaatgcaaatcccgagctctctatttata 26979178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1413874 - 1413806
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||| ||||| |||  |||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  1413874 aaaccagataagaggattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 1413806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24776631 - 24776563
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    ||||||||||||||||||  |||||| |||||||||| |||||||| |  || |||||||| |||||||    
T  24776631 aaaccagagaagagtattcgattctcggttttggagtaaagaataccaatcctgagctctctatttata 24776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24771176 - 24771108
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    ||||||||||||||| ||| |||||  |||||||||| |||||||| |  || |||||||| |||||||    
T  24771176 aaaccagagaagagtgtttgattcttggttttggagtaaagaataccaatcctgagctctctatttata 24771108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36254109 - 36254177
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||| ||||||||| |||  |||||| ||||||||||||||||| | || ||| ||||||| |||||||    
T  36254109 aaactagagaagaggattcgattctcggttttggagtgaagaatcccattcccaagctctctatttata 36254177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 186; Significance: 1e-100; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 27711610 - 27711840
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  27711610 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 27711709  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711710 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 27711809  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  27711810 gtttttttcattatacactagtgttccaaca 27711840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 34318040 - 34317840
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  34318040 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 34317941  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34317940 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 34317841  T
Q  201 g 201  Q
    |    
T  34317840 g 34317840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 37404226 - 37403995
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||     
T  37404226 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgggctctcaatttataaggaggatttctactagagtgtgtgatctac 37404127  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404126 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 37404027  T
Q  201 g-nnnnnnncattatacactagtgttccaaca 231  Q
    |        |||||||||||||||||||||||    
T  37404026 gttttttttcattatacactagtgttccaaca 37403995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 37409345 - 37409114
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||     
T  37409345 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttatactagagtgtgtgatctac 37409246  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409245 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 37409146  T
Q  201 g-nnnnnnncattatacactagtgttccaaca 231  Q
    |        |||||||||||||||||||||||    
T  37409145 gttttttttcattatacactagtgttccaaca 37409114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 36684470 - 36684270
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  36684470 aaaccagagaagagtattcgattctcagttttggagtcaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 36684371  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36684370 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 36684271  T
Q  201 g 201  Q
    |    
T  36684270 g 36684270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 11250931 - 11250701
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||| ||||||||| ||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||     
T  11250931 aaaccagagaagagtattcgattctcaattttggagtaaagaatactattcacgagctctcaatttataaggaggatttctactagagtgtgtgatctaa 11250832  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  11250831 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaagactccacaaactcactggtatactccaa 11250732  T
Q  201 g-nnnnnnncattatacactagtgttccaac 230  Q
    |        ||||||||||||||||||||||    
T  11250731 gtttttttccattatacactagtgttccaac 11250701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 27716730 - 27716930
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    |||||||| |||||||||  ||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  27716730 aaaccagataagagtattcgattatcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 27716829  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  27716830 ccgatgtgggacataaaaatttcaattcacactttacactagtttctccatccttgtgcttacgttccaaaggctccacaaactcactagtatactccaa 27716929  T
Q  201 g 201  Q
    |    
T  27716930 g 27716930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 5725365 - 5725516
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725365 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 5725464  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    ||||  ||||||||||||||||       |||||||||||||||||||||||    
T  5725465 aaaccaactagtatactccaagttttttccattatacactagtgttccaaca 5725516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 3585301 - 3585452
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3585301 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacattttacactagtttctccatccttgtgtttacattccaaaggctccac 3585400  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    ||||  ||||||||||||||||       || ||||||||||||||||||||    
T  3585401 aaaccaactagtatactccaagttttttccaatatacactagtgttccaaca 3585452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 5730771 - 5730922
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  5730771 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggtttcac 5730870  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    ||||  |||||||||||||||        |||||||||||||||||| ||||    
T  5730871 aaaccaactagtatactccaaattttttccattatacactagtgttctaaca 5730922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 235
Target Start/End: Complemental strand, 48246119 - 48245964
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  48246119 ctactagagtgtgtgatctacccaatgtgggacataaaaattttaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccac 48246020  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaacatatt 235  Q
    | |   ||||||||||||||||       || | ||||||| ||||||||||||||    
T  48246019 ataacaactagtatactccaagtttttgccaatgtacactattgttccaacatatt 48245964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 50959069 - 50958977
Alignment:
Q  142 gtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaag--nnnnnnncattatacactagtgttccaacat 232  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  50959069 gtttctccattcttgtgtttacattccaaaggctccacaaactcactagtatactccaagtttttcctccattatacactagtgttccaacat 50958977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5730378 - 5730446
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | |  ||||||||||| |||||||    
T  5730378 aaaccagagaagaggattcgattctcggttttggagtgaagaatgcaaatcccgagctctctatttata 5730446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3584874 - 3584942
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | |  || |||||||| |||||||    
T  3584874 aaaccagagaagaggattcgattctcggttttggagtgaagaatgcaaatcctgagctctctatttata 3584942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 179; Significance: 2e-96; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 3850 - 4081
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  3850 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 3949  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3950 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 4049  T
Q  201 g-nnnnnnncattatacactagtgttccaaca 231  Q
    |        |||||||||||||||||||||||    
T  4050 gttttttttcattatacactagtgttccaaca 4081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 174; Significance: 2e-93; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 20090417 - 20090187
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  20090417 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 20090318  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  20090317 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatcctgatgtttacatgccaaaggctccacaaactcactagtatactccaa 20090218  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  20090217 gtttttttcattatacactagtgttccaaca 20090187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 20095542 - 20095312
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  20095542 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 20095443  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  20095442 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatcctgatgtttacatgccaaaggctccacaaactcactagtatactccaa 20095343  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  20095342 gtttttttcattatacactagtgttccaaca 20095312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 15762785 - 15762556
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  15762785 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 15762686  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  15762685 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccacaaactcactagtatactccaa 15762586  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  15762585 g-ttttttcattatacactagtgttccaaca 15762556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 15767946 - 15767717
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  15767946 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 15767847  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  15767846 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccacaaactcactagtatactccaa 15767747  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  15767746 g-ttttttcattatacactagtgttccaaca 15767717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 55129077 - 55129276
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  55129077 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 55129176  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55129177 ccgatgtgggacataaaattttcaattcacactttacactagtttctccat-cttgtgtttacattccaaaggctccacaaactcactagtatactccaa 55129275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 17369006 - 17369236
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  17369006 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 17369105  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| || ||    
T  17369106 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaaccaactagtataatcgaa 17369205  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       ||||||| |||||||||||||||    
T  17369206 gttttttccattatatactagtgttccaaca 17369236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 3481796 - 3481645
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3481796 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 3481697  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||    
T  3481696 aaactcactagtatactccaagtttttttcattatacactagtgttccaaca 3481645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 34128558 - 34128402
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34128558 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 34128459  T
Q  180 aaactcactagtatactccaag--nnnnnnncattatacactagtgttccaacatat 234  Q
    |||   ||||||||||||||||         ||||||||||||||||||||||||||    
T  34128458 aaatcaactagtatactccaagttttttttccattatacactagtgttccaacatat 34128402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 17358566 - 17358716
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17358566 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacacta-tttctccatccttgtgtttacattccaaaggctccac 17358664  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    ||||  ||||||||| ||||||       ||||||| |||||||||| ||||    
T  17358665 aaaccaactagtataatccaagttttttccattatatactagtgttctaaca 17358716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 30338247 - 30338096
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30338247 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactaatttctccatccttgtgtttacattccaaaggctccac 30338148  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||| ||||||||||    
T  30338147 ataacaactagtatactccaagtttttgccaatatacactactgttccaaca 30338096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 30341351 - 30341200
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| |  || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30341351 ctactagagtgtgtgatctacctaatgtgggccataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 30341252  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  30341251 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 30341200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 54271312 - 54271463
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54271312 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttagactagtttctccatccttgtgtttacattccaaaggctccac 54271411  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||| ||||       || |||| |||||||||||||||    
T  54271412 ataacaactagtatacttcaagtttttgccaatataaactagtgttccaaca 54271463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 3476339 - 3476185
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||   |||| |    
T  3476339 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatttctcctc 3476240  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaacatat 234  Q
    | |   ||||||||||||||||       || |||||||||||||||||||||||    
T  3476239 ataacaactagtatactccaagtttttgccaatatacactagtgttccaacatat 3476185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 4117097 - 4116946
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |  ||| |    
T  4117097 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttcttcatcattgtgtttacattccaatgtttcctc 4116998  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  4116997 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 4116946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 17358111 - 17358179
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||||||||||||||||||||| | |  ||||||||||| |||||||    
T  17358111 aaaccagagaagaggattcgattctcagttttggagtgaagaatgcaaatcccgagctctctatttata 17358179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 54270918 - 54270986
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  54270918 aaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 54270986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3482234 - 3482166
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||| ||||| |||  |||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  3482234 aaaccagataagaggattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 3482166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4117413 - 4117345
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||| ||||||| |||  |||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  4117413 aaaccaaagaagaggattcgattctcggttttggagtgaagaatcccattcccgagctctctatttata 4117345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10321716 - 10321784
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    ||||| |||||||| ||| ||||||| ||||||||||||||||| | |  ||||||||||| |||||||    
T  10321716 aaacctgagaagaggattcaattctcggttttggagtgaagaatgcaaatcccgagctctctatttata 10321784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30338574 - 30338506
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | |  ||||||||||| |||||||    
T  30338574 aaaccagagaagaggattcgattctcggttttggagtgaagaatccaaatcccgagctctctatttata 30338506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34128991 - 34128923
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||||||||||||||||||||| | |  ||||| ||||| |||||||    
T  34128991 aaaccagagaagaggattcgattctcagttttggagtgaagaatgcaaatcccgacctctctatttata 34128923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3476767 - 3476699
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||   |||||||||||||||| | || ||||||||||| |||||||    
T  3476767 aaaccagagaagaggattcgattcttgtttttggagtgaagaatcccattcccgagctctctatttata 3476699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 173; Significance: 7e-93; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 3364 - 3564
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  3364 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 3463  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3464 cggatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 3563  T
Q  201 g 201  Q
    |    
T  3564 g 3564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 173; Significance: 7e-93; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 81171 - 80971
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  81171 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 81072  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  81071 cggatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 80972  T
Q  201 g 201  Q
    |    
T  80971 g 80971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 7e-93; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 32010866 - 32011066
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||     
T  32010866 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtatgatctac 32010965  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32010966 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 32011065  T
Q  201 g 201  Q
    |    
T  32011066 g 32011066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 32016040 - 32016270
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  32016040 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 32016139  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32016140 ccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaattcactagtatactccaa 32016239  T
Q  201 gnnnnnnncattatacactagtgttccaacat 232  Q
    |       || |||||||||||||||||||||    
T  32016240 g-tttttccaatatacactagtgttccaacat 32016270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 2165621 - 2165390
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    |||| ||||||||| |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  2165621 aaactagagaagagcatttgattctcaattttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 2165522  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacatt-ccaaaggctccacaaactcactagtatactcca 199  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  2165521 ccgatgtgagacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattcccaaagactccacaaactcactagtatactcca 2165422  T
Q  200 agnnnnnnncattatacactagtgttccaaca 231  Q
    |        |||||||||||||||||||||||    
T  2165421 aaattttttcattatacactagtgttccaaca 2165390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 43998693 - 43998542
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43998693 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacatttcaaaggctccac 43998594  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    ||||  ||||||||||||||||       |||||||||||||||||||||||    
T  43998593 aaaccaactagtatactccaagtttttttcattatacactagtgttccaaca 43998542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 17955281 - 17955127
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17955281 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacacttcacactagtttctccatccttgtgtttacattccaaaggctccac 17955182  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaacatat 234  Q
    |||   |||||||||||| |||       ||||||||||||||||||||||||||    
T  17955181 aaaacaactagtatactctaagtcttttccattatacactagtgttccaacatat 17955127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 42513995 - 42513844
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||    
T  42513995 ctactagagtgtgtgatctatccaatgtgggacataaaattttcaattcacactttacactattttctacatccttgtgtttacattccaatgtctccac 42513896  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  42513895 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 42513844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 80 - 201
Target Start/End: Original strand, 24885324 - 24885445
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  24885324 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatccttgtgtttacattccaaagtctccac 24885423  T
Q  180 aaactcactagtatactccaag 201  Q
    | |   ||||||||||||||||    
T  24885424 ataacaactagtatactccaag 24885445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 21641273 - 21641123
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||||| | || |||    
T  21641273 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactag-atctacatccttgtatttacattccaatgtctgcac 21641175  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||| ||||       || ||||||||||||||||||||    
T  21641174 ataacaactagtatacttcaagtttttgccaatatacactagtgttccaaca 21641123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24884986 - 24885054
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  24884986 aaaccagagaagaggattcgattctcggttttggagtgaagaattccattcccgagctctctatttata 24885054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21643903 - 21643835
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | || |||||| |||| |||||||    
T  21643903 aaaccagagaagaggattcgattctcggttttggagtgaagaatcccattcccgaggtctctatttata 21643835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21643088 - 21643020
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||| ||||||| |||  |||||| ||||||||||||||||| | || |||||| |||| |||||||    
T  21643088 aaaccaaagaagaggattcgattctcggttttggagtgaagaatcccattcccgaggtctctatttata 21643020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21643463 - 21643395
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||| ||||||| |||  |||||| ||||||||||||||||| | || |||||| |||| |||||||    
T  21643463 aaaccaaagaagaggattcgattctcggttttggagtgaagaatcccattcccgaggtctctatttata 21643395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42514242 - 42514182
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctc 61  Q
    |||||||||||||| |||  |||||| |||||||||||||||||   || |||||||||||    
T  42514242 aaaccagagaagaggattcgattctcggttttggagtgaagaatctcattcccgagctctc 42514182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 173; Significance: 7e-93; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 42728375 - 42728175
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  42728375 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 42728276  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42728275 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtaaactccaa 42728176  T
Q  201 g 201  Q
    |    
T  42728175 g 42728175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 42723206 - 42723007
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  42723206 aaaccagagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 42723107  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42723106 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtaaactccaa 42723007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 5 - 232
Target Start/End: Original strand, 40392610 - 40392837
Alignment:
Q  5 cagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctatccga 104  Q
    ||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  40392610 cagagaaaagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccga 40392709  T
Q  105 tatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnn 204  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||       
T  40392710 tgtgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacattgcaaaggctccacaaactcactagtatactccaagttt 40392809  T
Q  205 nnnncattatacactagtgttccaacat 232  Q
        ||||||||||||||||||||||||    
T  40392810 ttttcattatacactagtgttccaacat 40392837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 44754355 - 44754129
Alignment:
Q  7 gagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctatccgata 106  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||     
T  44754355 gagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatg 44754256  T
Q  107 tgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnn 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||         
T  44754255 tgggacataaaattttcaattcacactttacactagtttctccatccttatgtttacatgccaaaggctccacaaactcactagtatactccaag-tttt 44754157  T
Q  207 nncattatacactagtgttccaacatat 234  Q
      ||||||||||||||||||||||||||    
T  44754156 ttcattatacactagtgttccaacatat 44754129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 44096642 - 44096871
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  44096642 aaaccagagaagagtattcgattctcagttttggagtaaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 44096741  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  44096742 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttttgtttacattccaaatgctccacaaactcactagtatactccaa 44096841  T
Q  201 gnnnnnnncattatacactagtgttccaaca 231  Q
    |       |||||||||||||||||||||||    
T  44096842 g-ttttttcattatacactagtgttccaaca 44096871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 44759521 - 44759298
Alignment:
Q  7 gagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctatccgata 106  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||     
T  44759521 gagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctacccgatg 44759422  T
Q  107 tgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaagnnnnn 206  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||         
T  44759421 tgggacataaaattttcaattcacactttacactaatttctccatccttatgtttacatgccaaaggctccacaaactcactagtatactccaag-tttt 44759323  T
Q  207 nncattatacactagtgttccaaca 231  Q
      |||||||||||||||||||||||    
T  44759322 ttcattatacactagtgttccaaca 44759298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 6 - 198
Target Start/End: Original strand, 40519925 - 40520122
Alignment:
Q  6 agagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttat----aaggagaatttctactagagtgtgtgatctatc 101  Q
    |||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||    |||||| |||||||||||||||||||||||| |    
T  40519925 agagaagagtattcgattctcagttttggagtgaagaatactattcccgagctctcaatttattcataaggaggatttctactagagtgtgtgatctacc 40520024  T
Q  102 c-gatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactcc 198  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40520025 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactcc 40520122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 40518280 - 40518075
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttat----aaggagaatttctactagagtgtgtgat 96  Q
    |||| |||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||||||||    |||||| |||||||||||||||||||||    
T  40518280 aaacaagagaagagtattcgattctcagttttggagtgaagaatactattcacgagctctcaatttattaataaggaggatttctactagagtgtgtgat 40518181  T
Q  97 ctatcc-gatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatac 195  Q
    ||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  40518180 ctaccccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttatattccaaaggctccacaaactcactattatac 40518081  T
Q  196 tccaag 201  Q
    ||||||    
T  40518080 tccaag 40518075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 4163042 - 4162891
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4163042 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 4162943  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    ||||  ||||||||||||||||       |||||||||| ||||||||||||    
T  4162942 aaaccaactagtatactccaagttttttccattatacaccagtgttccaaca 4162891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 28751168 - 28751014
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28751168 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 28751069  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaacatat 234  Q
    | |   ||||||||||||||||       || |||||||||||||||||| ||||    
T  28751068 ataacaactagtatactccaagtttttgccaatatacactagtgttccaatatat 28751014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4163399 - 4163331
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| ||||||||||||||||| | |  ||||||||||| |||||||    
T  4163399 aaaccagagaagaggattcgattctcggttttggagtgaagaatgcaaatcccgagctctctatttata 4163331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 43727840 - 43727791
Alignment:
Q  311 acttagattgttgtcacaaaaattgtcaaattttatttcttcaaataaca 360  Q
    ||||||||| ||||| |||||||||||||| | ||||| |||||||||||    
T  43727840 acttagattattgtcgcaaaaattgtcaaagtgtatttgttcaaataaca 43727791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28751551 - 28751483
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||| ||||||| |||  |||||| |||||||||||||||||   || ||||||||||| |||||||    
T  28751551 aaaccaaagaagaggattcgattctcggttttggagtgaagaatctcattcccgagctctctatttata 28751483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 169; Significance: 2e-90; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 31885 - 32085
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    |||||||| |||||||||  |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  31885 aaaccagataagagtattcgattctcagttttggtgtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 31984  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31985 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 32084  T
Q  201 g 201  Q
    |    
T  32085 g 32085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 26713 - 26913
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttataaggagaatttctactagagtgtgtgatctat 100  Q
    |||||||| |||||||||  |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  26713 aaaccagataagagtattcgattctcagttttggtgtgaagaatactattcccgagctctcaatttataaggaggatttctactagagtgtgtgatctac 26812  T
Q  101 ccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccacaaactcactagtatactccaa 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26813 ccgatgtgggacataaaattttcaattcacactttacactagtttctccatccttttgtttacattccaaaggctccacaaactcactagtatactccaa 26912  T
Q  201 g 201  Q
    |    
T  26913 g 26913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 8681 - 8530
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8681 ctactagagtgtgtgatctacccaatgtgggacataaaattttaaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 8582  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  8581 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 8530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9030 - 8962
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||| ||||||||| |||  ||||||  |||||||||||||||| | || ||||||||||| |||||||    
T  9030 aaactagagaagaggattcgattctcgtttttggagtgaagaatcccattcccgagctctctatttata 8962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 79; Significance: 9e-37; HSPs: 4)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 13133 - 12982
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||| |    
T  13133 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttacactagtttctacatcattgtgtttacattccaatgtctcctc 13034  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   ||||||||||||||||       || ||||||||||||||||||||    
T  13033 ataacaactagtatactccaagtttttgccaatatacactagtgttccaaca 12982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 18590 - 18439
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttacactagtttctccatccttgtgtttacattccaaaggctccac 179  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| | |||| |    
T  18590 ctactagagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttatactagtttctacatcattgtgtttacattccaatgtctcctc 18491  T
Q  180 aaactcactagtatactccaagnnnnnnncattatacactagtgttccaaca 231  Q
    | |   |||||||||||| |||       || ||||||||||||||||||||    
T  18490 ataacaactagtatactctaagtttttgccaatatacactagtgttccaaca 18439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13561 - 13493
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||  ||||||||||||||||| | || ||||||||||| |||||||    
T  13561 aaaccagagaagaggattcgattcttggttttggagtgaagaatcccattcccgagctctctatttata 13493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19014 - 18946
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    ||||||||||||||||||  |||||| |||||||||| |||||||| |  || |||||||| |||||||    
T  19014 aaaccagagaagagtattcgattctcggttttggagtaaagaataccaatcctgagctctctatttata 18946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 37654 - 37712
Alignment:
Q  80 ctactagagtgtgtgatctatccgatatgggacataaaattttcaattcacactttaca 138  Q
    ||||| |||||||||||||| || || ||||||||||||||||||||||||||||||||    
T  37654 ctactggagtgtgtgatctacccaatgtgggacataaaattttcaattcacactttaca 37712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37283 - 37351
Alignment:
Q  1 aaaccagagaagagtatttaattctcagttttggagtgaagaatactatacccgagctctcaatttata 69  Q
    |||||||||||||| |||  |||||| |||||||||||||||||   || ||||||||||| |||||||    
T  37283 aaaccagagaagaggattcgattctcggttttggagtgaagaatctcattcccgagctctctatttata 37351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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