View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1382-INSERTION-5 (Length: 237)

Name: NF1382-INSERTION-5
Description: NF1382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1382-INSERTION-5
NF1382-INSERTION-5
[»] chr4 (14 HSPs)
chr4 (8-237)||(4220742-4220971)
chr4 (38-236)||(4011720-4011918)
chr4 (8-237)||(3811931-3812160)
chr4 (9-222)||(4003255-4003468)
chr4 (59-236)||(3915945-3916122)
chr4 (8-236)||(4026477-4026705)
chr4 (28-236)||(3952958-3953164)
chr4 (28-237)||(3821504-3821713)
chr4 (28-235)||(3926908-3927115)
chr4 (95-207)||(3988159-3988271)
chr4 (113-229)||(4019524-4019640)
chr4 (70-236)||(3825760-3825926)
chr4 (69-223)||(3962391-3962545)
chr4 (155-237)||(3805792-3805874)
[»] chr5 (1 HSPs)
chr5 (8-236)||(13399082-13399310)
[»] chr8 (7 HSPs)
chr8 (78-223)||(7086966-7087111)
chr8 (78-178)||(7069945-7070045)
chr8 (110-220)||(7078427-7078537)
chr8 (110-210)||(7028691-7028791)
chr8 (110-210)||(7035393-7035493)
chr8 (107-219)||(7021085-7021197)
chr8 (129-166)||(7100635-7100672)


Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 8 - 237
Target Start/End: Complemental strand, 4220971 - 4220742
Alignment:
Q  8 ctttcttggccaattgtatgaggcttttattcgaaaacaaataaatatctctgttgattacaaacttaagaaaggagatgacatatcacattcacttggt 107  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4220971 ctttcttggcaaattgtatgaggcttttattcgaaaacaaataaatatctttgttgattacaaacttaagaaaggagatgacatatcacattcacttggt 4220872  T
Q  108 gaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgca 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4220871 gaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgca 4220772  T
Q  208 gagagaaatatggacaacttgtaataccta 237  Q
    ||||||||||||||||||||||||||||||    
T  4220771 gagagaaatatggacaacttgtaataccta 4220742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 38 - 236
Target Start/End: Complemental strand, 4011918 - 4011720
Alignment:
Q  38 tcgaaaacaaataaatatctctgttgattacaaacttaagaaaggagatgacatatcacattcacttggtgaagcaattgaaggatcatccatttcattg 137  Q
    |||||| |||||||||  || ||||||| | ||||||||||  ||||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||    
T  4011918 tcgaaagcaaataaatgcctttgttgatgagaaacttaagaggggagatgacatgtcacattcacttgttgaagcaattgaaggatctcccatttcattg 4011819  T
Q  138 gtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgcagagagaaatatggacaacttgtaatacct 236  Q
    |||||||||||  |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||  |||||||||||    
T  4011818 gtcatattctcataaaactatgcttgttcacattggtgtttagaagaacttgcgaaaataattgagtgcaaagagaaatatggacagattgtaatacct 4011720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 237
Target Start/End: Complemental strand, 3812160 - 3811931
Alignment:
Q  8 ctttcttggccaattgtatgaggcttttattcgaaaacaaataaatatctctgttgattacaaacttaagaaaggagatgacatatcacattcacttggt 107  Q
    ||||||| |||| |||  ||||||||||  |||||| |||||||||  || | ||||| | ||||||||||  |||||||||||||||||||||||||      
T  3812160 ctttcttagccatttggctgaggctttttctcgaaagcaaataaatgcctttcttgatgagaaacttaagaggggagatgacatatcacattcacttgta 3812061  T
Q  108 gaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgca 207  Q
    |||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  3812060 gaagcaatggaaggatctcccatttcattggtcatattctcagaaaactatgcttcttcacattggtgtttagatgagcttgtgaaaataattgagtgca 3811961  T
Q  208 gagagaaatatggacaacttgtaataccta 237  Q
     ||||| |||||||||  ||||||||||||    
T  3811960 aagagacatatggacattttgtaataccta 3811931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 4003468 - 4003255
Alignment:
Q  9 tttcttggccaattgtatgaggcttttattcgaaaacaaataaatatctctgttgattacaaacttaagaaaggagatgacatatcacattcacttggtg 108  Q
    ||||||||||| |||  | | ||||||  ||| ||||||||||||  || ||||||  | ||||||||||  |||||||| ||||||||| ||||||  |    
T  4003468 tttcttggccatttgattaaagcttttcctcgtaaacaaataaatgcctttgttgacgaaaaacttaagaggggagatgatatatcacatgcacttgtag 4003369  T
Q  109 aagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgcag 208  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  4003368 aagcaattgaaggatcattcatttcattggtcatattctcagaaaactatgcttcttcacattggtgtttagaagaacttgtgaaaataattgagtgcaa 4003269  T
Q  209 agagaaatatggac 222  Q
    ||||||||||||||    
T  4003268 agagaaatatggac 4003255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 3915945 - 3916122
Alignment:
Q  59 tgttgattacaaacttaagaaaggagatgacatatcacattcacttggtgaagcaattgaaggatcatccatttcattggtcatattctctgaaaactat 158  Q
    ||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||    
T  3915945 tgttgatgacaaacttaagaggggagatgacatatcagattcacttggtgaagcaatcgaaggatcattcatttcattgatcatattctcagaaaactat 3916044  T
Q  159 gcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgcagagagaaatatggacaacttgtaatacct 236  Q
    |||| |||||||||||||||| |||||||||| |||||| ||||||| | ||||||||||| |||| |||||||||||    
T  3916045 gcttgttcacattggtgtttaaaagaacttgtgaaaatagttgagtgtaaagagaaatatgcacaaattgtaatacct 3916122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 4026705 - 4026477
Alignment:
Q  8 ctttcttggccaattgtatgaggcttttattcgaaaacaaataaatatctctgttgattacaaacttaagaaaggagatgacatatcacattcacttggt 107  Q
    |||||||||||| |||  | ||||||||  |||||| |||||||||  || ||||||| ||||||||||||  ||||||||||||||  |||||||||      
T  4026705 ctttcttggccatttggctaaggctttttctcgaaagcaaataaatgcctttgttgatgacaaacttaagaggggagatgacatatcgaattcacttgta 4026606  T
Q  108 gaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgca 207  Q
    |||||||| |||||||||| |||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||||||||| ||||    
T  4026605 gaagcaatagaaggatcattcatttcattgatcatattctcagaaaactatgcttcttcaagttggtgtttagaagaacttttgaaaataattgattgca 4026506  T
Q  208 gagagaaatatggacaacttgtaatacct 236  Q
     |||||||||||||||  |||||||||||    
T  4026505 aagagaaatatggacagattgtaatacct 4026477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 236
Target Start/End: Original strand, 3952958 - 3953164
Alignment:
Q  28 aggcttttattcgaaaacaaataaatatctctgttgattacaaacttaagaaaggagatgacatatcacattcacttggtgaagcaattgaaggatcatc 127  Q
    ||||||||  || ||| |||||||||  || ||||||| ||||||||||||  |||||||||||||||  |||| ||  |||||||||||||||||| |     
T  3952958 aggcttttcctcaaaagcaaataaatgcctttgttgatgacaaacttaagaggggagatgacatatca--ttcaatttttgaagcaattgaaggatcgtt 3953055  T
Q  128 catttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgcagagagaaatatggacaactt 227  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||  ||    
T  3953056 catttcattgatcatattctcagaaaactatgcttcttcacgttggtgtttagaagaacttgtgaaaataattgagtgcagagagaaaaatggacagatt 3953155  T
Q  228 gtaatacct 236  Q
    |||||||||    
T  3953156 gtaatacct 3953164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 237
Target Start/End: Complemental strand, 3821713 - 3821504
Alignment:
Q  28 aggcttttattcgaaaacaaataaatatctctgttgattacaaacttaagaaaggagatgacatatcacattcacttggtgaagcaattgaaggatcatc 127  Q
    ||||||||  |||||| |||||||||  || ||||||| ||  ||||| ||  ||||||||||||||||||||||||  ||||||||||||||||||  |    
T  3821713 aggcttttcctcgaaagcaaataaatgcctttgttgatgacgcacttacgaggggagatgacatatcacattcactttttgaagcaattgaaggatctcc 3821614  T
Q  128 catttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgcagagagaaatatggacaactt 227  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||| |||||||||||||||  ||    
T  3821613 catttcattggtcatattctcaaaaaactatgcttcttcacattggtgtttagatgagcttgtgaaaataatcgagtgcaaagagaaatatggacagatt 3821514  T
Q  228 gtaataccta 237  Q
    ||| ||||||    
T  3821513 gtattaccta 3821504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 28 - 235
Target Start/End: Original strand, 3926908 - 3927115
Alignment:
Q  28 aggcttttattcgaaaacaaataaatatctctgttgattacaaacttaagaaaggagatgacatatcacattcacttggtgaagcaattgaaggatcatc 127  Q
    |||||||| ||| ||| |||||||||   | ||||||| |||||||| | |  ||||||||||||||| ||||||||| |||||||||  ||||||||||    
T  3926908 aggcttttcttcaaaagcaaataaatgcttttgttgatgacaaacttcacaggggagatgacatatcagattcacttgttgaagcaatcaaaggatcatc 3927007  T
Q  128 catttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgcagagagaaatatggacaactt 227  Q
    |||||  ||| ||||||| || ||||| ||||||| ||||||||||||||||||||||||||| |||||| ||||||| | ||||||||||| |||| ||    
T  3927008 cattttgttgatcatattttcagaaaaatatgcttgttcacattggtgtttagaagaacttgtgaaaatagttgagtgtaaagagaaatatgcacaaatt 3927107  T
Q  228 gtaatacc 235  Q
    ||||||||    
T  3927108 gtaatacc 3927115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 3988271 - 3988159
Alignment:
Q  95 acattcacttggtgaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaa 194  Q
    ||||||||||| ||||||||||||||| || |  ||||||||||||||||||||  |||| ||| |||||||||||||||||||||| |||||||| |||    
T  3988271 acattcacttgttgaagcaattgaaggctcgttaatttcattggtcatattctcaaaaaattattcttcttcacattggtgtttagatgaacttgtgaaa 3988172  T
Q  195 ataattgagtgca 207  Q
    ||||| |||||||    
T  3988171 ataatcgagtgca 3988159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 4019640 - 4019524
Alignment:
Q  113 aattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgcagagag 212  Q
    ||||||||||||||  ||||| ||| ||||||||||  || |||||||||||||||  |||||||| ||||||||||| | |||| || | |||||||||    
T  4019640 aattgaaggatcattaatttccttgatcatattctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagag 4019541  T
Q  213 aaatatggacaacttgt 229  Q
    |||||||||||| ||||    
T  4019540 aaatatggacaaattgt 4019524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 3825926 - 3825760
Alignment:
Q  70 aacttaagaaaggagatgacatatcacattcacttggtgaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcaca 169  Q
    |||||||||  |||||||| ||| |||| |||||||    || || |||||||||||  ||||| ||| ||||||||||  || ||||||||||||||      
T  3825926 aacttaagaggggagatgaaataccacaatcacttgtaagaggaaatgaaggatcattaatttccttgatcatattctcacaagactatgcttcttcatg 3825827  T
Q  170 ttggtgtttagaagaacttgtaaaaataattgagtgcagagagaaatatggacaacttgtaatacct 236  Q
    ||||||||||||||||| ||| | ||||  | | ||||||||||||||||||||| |||| ||||||    
T  3825826 ttggtgtttagaagaacatgtcacaatacgtcaatgcagagagaaatatggacaaattgttatacct 3825760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 3962391 - 3962545
Alignment:
Q  69 aaacttaagaaaggagatgacatatcacattcacttggtgaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcac 168  Q
    ||||||||||  |||||||| ||| |||| |||||||    ||||||||||||||| |  ||||| ||| ||||||| ||  |  ||||||||||||||     
T  3962391 aaacttaagaggggagatgaaataccacaatcacttgtcagagcaattgaaggatcgttaatttccttgatcatattttcacacgactatgcttcttcat 3962490  T
Q  169 attggtgtttagaagaacttgtaaaaataattgagtgcagagagaaatatggaca 223  Q
     ||||||||||||||||||||| | || | || | ||||||||||||||||||||    
T  3962491 gttggtgtttagaagaacttgttacaacacttcaatgcagagagaaatatggaca 3962545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 3805874 - 3805792
Alignment:
Q  155 ctatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgcagagagaaatatggacaacttgtaataccta 237  Q
    |||||||||||||  ||||||||| || |||||||| | |||| || | |||||| |||||||||||||  |||| |||||||    
T  3805874 ctatgcttcttcatgttggtgtttggacgaacttgtcacaatacttcaatgcagaaagaaatatggacagattgttataccta 3805792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 13399310 - 13399082
Alignment:
Q  8 ctttcttggccaattgtatgaggcttttattcgaaaacaaataaatatctctgttgattacaaacttaagaaaggagatgacatatcacattcacttggt 107  Q
    |||||||||||| |||| | ||||||||  || ||| ||||||||| ||| ||||||  ||||||||||||  ||| ||||||||||||||||||||  |    
T  13399310 ctttcttggccatttgtttaaggctttttctcaaaagcaaataaatgtctttgttgacgacaaacttaagaggggaaatgacatatcacattcacttttt 13399211  T
Q  108 gaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgca 207  Q
    |||||||| ||||||||||  ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  13399210 gaagcaatcgaaggatcatttatttcattgatcatattctcagaaaactatgcttcttcacgttggtgtttagaagaacttgtgaaaataattgagtgca 13399111  T
Q  208 gagagaaatatggacaacttgtaatacct 236  Q
     |||||||||||||||| |||||||||||    
T  13399110 aagagaaatatggacaaattgtaatacct 13399082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 223
Target Start/End: Complemental strand, 7087111 - 7086966
Alignment:
Q  78 aaaggagatgacatatcacattcacttggtgaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtt 177  Q
    ||||| ||||| ||| |||| ||||||  |||||| ||||||  ||| || |||||||| |||||||||||| ||||||||||||||||| | |||||||    
T  7087111 aaaggtgatgaaatagcacaatcactttttgaagctattgaaacatcttcaatttcattagtcatattctctcaaaactatgcttcttcaaaatggtgtt 7087012  T
Q  178 tagaagaacttgtaaaaataattgagtgcagagagaaatatggaca 223  Q
    | || || ||||| |||||  ||||||| ||||||||| |||||||    
T  7087011 tggatgagcttgtcaaaattgttgagtgtagagagaaagatggaca 7086966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 178
Target Start/End: Complemental strand, 7070045 - 7069945
Alignment:
Q  78 aaaggagatgacatatcacattcacttggtgaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtt 177  Q
    |||||| |||| |||||||| ||||||  |||||||||||||  ||| || |||||||| |||||||||||| |||||||||||||||||  ||||||||    
T  7070045 aaaggaaatgaaatatcacagtcactttttgaagcaattgaaacatcttcaatttcattagtcatattctctcaaaactatgcttcttcatcttggtgtt 7069946  T
Q  178 t 178  Q
    |    
T  7069945 t 7069945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 220
Target Start/End: Complemental strand, 7078537 - 7078427
Alignment:
Q  110 agcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgcaga 209  Q
    ||||||||||  ||||| |||||||||||| |||||||||  ||||| ||| |||||| |||||||| | || || ||||| |||||| ||||||| |||    
T  7078537 agcaattgaaaaatcattcatttcattggttatattctctccaaactttgcatcttcatattggtgtatggaggagcttgtgaaaatagttgagtgtaga 7078438  T
Q  210 gagaaatatgg 220  Q
    || ||||||||    
T  7078437 gaaaaatatgg 7078427  T

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Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 7028691 - 7028791
Alignment:
Q  110 agcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgcaga 209  Q
    ||||||||||  |||||  ||||||||||||||||| |||  ||||| ||| ||||||||||||||||| || || ||||| |||||| | |||||||||    
T  7028691 agcaattgaaaaatcattgatttcattggtcatattttctccaaactttgcatcttcacattggtgtttggacgagcttgtgaaaatagtcgagtgcaga 7028790  T
Q  210 g 210  Q
    |    
T  7028791 g 7028791  T

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Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 7035393 - 7035493
Alignment:
Q  110 agcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgcaga 209  Q
    ||||||||||  |||||  ||||||||||||||||| ||   ||||| ||| ||||||||||||||||| || || ||||| |||||| | |||||||||    
T  7035393 agcaattgaaaaatcattgatttcattggtcatattttcaccaaactttgcatcttcacattggtgtttggatgagcttgtgaaaatagtcgagtgcaga 7035492  T
Q  210 g 210  Q
    |    
T  7035493 g 7035493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 7021085 - 7021197
Alignment:
Q  107 tgaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacattggtgtttagaagaacttgtaaaaataattgagtgc 206  Q
    |||||||||||||  ||||| ||||   |||||||||||||||  ||||| | | | ||||||||||||||| || || ||||| |||||| |||| |||    
T  7021085 tgaagcaattgaaaaatcattcattcatttggtcatattctctccaaacttttcatattcacattggtgtttggatgagcttgtgaaaatagttgattgc 7021184  T
Q  207 agagagaaatatg 219  Q
    ||||  |||||||    
T  7021185 agagcaaaatatg 7021197  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 7100672 - 7100635
Alignment:
Q  129 atttcattggtcatattctctgaaaactatgcttcttc 166  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  7100672 atttctttggtcatattctctcaaaactatgcttcttc 7100635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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