View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13820_high_5 (Length: 437)

Name: NF13820_high_5
Description: NF13820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13820_high_5
NF13820_high_5
[»] chr8 (11 HSPs)
chr8 (21-258)||(10598935-10599200)
chr8 (324-418)||(40462337-40462431)
chr8 (257-310)||(14099743-14099796)
chr8 (378-419)||(26521893-26521934)
chr8 (348-419)||(9755775-9755846)
chr8 (258-312)||(3917795-3917849)
chr8 (256-310)||(38980160-38980214)
chr8 (256-310)||(39011257-39011311)
chr8 (324-364)||(14101036-14101076)
chr8 (378-411)||(34315071-34315104)
chr8 (258-310)||(42480897-42480949)
[»] chr4 (17 HSPs)
chr4 (324-427)||(47863565-47863668)
chr4 (348-419)||(12862605-12862676)
chr4 (348-419)||(6658647-6658718)
chr4 (348-419)||(56083445-56083516)
chr4 (262-411)||(47861936-47862086)
chr4 (258-315)||(16314198-16314256)
chr4 (259-312)||(17288631-17288685)
chr4 (378-419)||(16312768-16312809)
chr4 (260-313)||(56083355-56083408)
chr4 (324-364)||(6210672-6210712)
chr4 (253-312)||(23506383-23506443)
chr4 (324-418)||(47376598-47376693)
chr4 (256-305)||(6212504-6212553)
chr4 (257-310)||(12861410-12861463)
chr4 (256-312)||(23504892-23504949)
chr4 (259-314)||(5169313-5169369)
chr4 (257-300)||(17288768-17288812)
[»] scaffold0262 (1 HSPs)
scaffold0262 (258-426)||(2759-2927)
[»] chr3 (13 HSPs)
chr3 (325-426)||(11151478-11151579)
chr3 (258-315)||(36438770-36438828)
chr3 (256-310)||(48537849-48537902)
chr3 (381-417)||(34825709-34825745)
chr3 (379-419)||(36437336-36437376)
chr3 (258-313)||(48165505-48165560)
chr3 (348-411)||(54672720-54672782)
chr3 (257-313)||(15439678-15439735)
chr3 (257-306)||(52042113-52042162)
chr3 (258-313)||(11150270-11150326)
chr3 (258-313)||(34799864-34799920)
chr3 (258-313)||(42278454-42278510)
chr3 (324-364)||(52090741-52090781)
[»] chr1 (16 HSPs)
chr1 (327-426)||(24304195-24304294)
chr1 (348-419)||(51676228-51676299)
chr1 (258-313)||(43403296-43403352)
chr1 (257-309)||(48030240-48030292)
chr1 (336-411)||(9010958-9011032)
chr1 (324-411)||(17242004-17242090)
chr1 (324-411)||(24302999-24303085)
chr1 (257-313)||(21747941-21747998)
chr1 (378-419)||(35712574-35712615)
chr1 (257-310)||(43402261-43402314)
chr1 (324-364)||(21749235-21749275)
chr1 (259-310)||(9008761-9008812)
chr1 (260-310)||(49383023-49383073)
chr1 (256-313)||(51676335-51676392)
chr1 (258-313)||(42098729-42098785)
chr1 (324-364)||(49384446-49384486)
[»] chr5 (4 HSPs)
chr5 (348-419)||(27491167-27491238)
chr5 (258-312)||(29875946-29876000)
chr5 (257-310)||(27490097-27490151)
chr5 (258-300)||(27491287-27491329)
[»] scaffold0049 (2 HSPs)
scaffold0049 (258-310)||(3925-3977)
scaffold0049 (259-312)||(386-440)
[»] chr7 (4 HSPs)
chr7 (324-411)||(5737244-5737330)
chr7 (259-313)||(19628181-19628235)
chr7 (385-419)||(47578501-47578535)
chr7 (257-313)||(12628031-12628088)
[»] chr6 (6 HSPs)
chr6 (258-313)||(12603936-12603991)
chr6 (261-313)||(26545868-26545920)
chr6 (256-311)||(32146093-32146149)
chr6 (258-313)||(25483399-25483454)
chr6 (378-418)||(5859019-5859059)
chr6 (324-364)||(9307089-9307129)
[»] chr2 (1 HSPs)
chr2 (378-411)||(29043522-29043555)
[»] scaffold0408 (1 HSPs)
scaffold0408 (257-309)||(10085-10136)
[»] scaffold0484 (1 HSPs)
scaffold0484 (257-310)||(11534-11587)
[»] scaffold0071 (1 HSPs)
scaffold0071 (257-313)||(22456-22513)
[»] scaffold0061 (1 HSPs)
scaffold0061 (349-406)||(9880-9936)


Alignment Details
Target: chr8 (Bit Score: 154; Significance: 2e-81; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 21 - 258
Target Start/End: Original strand, 10598935 - 10599200
Alignment:
Q  21 aatggcggcatggtatgagtcttgttgtattgataatgatgtataattgtaatatttgtggtatgaataaatgaatgttagttttattgctataa--ata 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  10598935 aatggcggcatggtatgagtcttgttgtattgataatgatgtataattgtaatatttgtggtatgaataaatgaatgttagttttattgctataaatata 10599034  T
Q  119 atttagagatcggttaaggaaaag-aaagtgatcgtgatcagtaagtagtcaat--------------------acaaataggaattgcaaatgattagg 197  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||||||||                    ||||||||||||||||||||||||||    
T  10599035 atttagagaacggttaaggaatagtaaagtgatcgtgatcagtaagtagtcaatagcaaataaattgttttgacacaaataggaattgcaaatgattagg 10599134  T
Q  198 tcttttgcatctcttcttcttcacaacctg-----tatgttcaaaaatcacaattgtttgtttata 258  Q
    ||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||    
T  10599135 tcttttgcatctcttcttcttcacaacctgataattatgttcaaaaatcacaattgtttgtttata 10599200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 324 - 418
Target Start/End: Original strand, 40462337 - 40462431
Alignment:
Q  324 cttggagattctccctcgccattagaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgctaactgtg 418  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||    
T  40462337 cttggagattcccccttgccattagaagattctttgattttcaaccctgaggcaatctgactggattaatgagctgatgtggcacgctgactgtg 40462431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 14099743 - 14099796
Alignment:
Q  257 tagggttaataggcttttacctcctgtcatttgggggacttttgatttaccccc 310  Q
    ||||||||||||||||||||| |||| |||||||||| |||||| |||||||||    
T  14099743 tagggttaataggcttttaccccctgccatttgggggtcttttggtttaccccc 14099796  T

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Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 26521934 - 26521893
Alignment:
Q  378 atctgactggattaatgagctgatgtggcacgctaactgtgt 419  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  26521934 atctgactggattaatgagctgatgtggcacgctgactgtgt 26521893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 419
Target Start/End: Original strand, 9755775 - 9755846
Alignment:
Q  348 gaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgctaactgtgt 419  Q
    ||||||| |||||||||||||||| |    ||||||||||||||||||| |||||| ||||||| |||||||    
T  9755775 gaagattatttgattttcaaccctaatgtcatctgactggattaatgagttgatgtagcacgctgactgtgt 9755846  T

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Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 3917795 - 3917849
Alignment:
Q  258 agggttaataggcttttacctcctgtcatttgggggacttttgatttacccccct 312  Q
    |||||||||||||||||||| |||| |||||||| ||| |||| |||||||||||    
T  3917795 agggttaataggcttttaccccctgccatttgggcgacatttggtttacccccct 3917849  T

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Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 38980214 - 38980160
Alignment:
Q  256 atagggttaataggcttttacctcctgtcatttgggggacttttgatttaccccc 310  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||| |||||||||    
T  38980214 atagggttaataggtttttaccccctgtcatttgggagtcttttggtttaccccc 38980160  T

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Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 39011311 - 39011257
Alignment:
Q  256 atagggttaataggcttttacctcctgtcatttgggggacttttgatttaccccc 310  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||| |||||||||    
T  39011311 atagggttaataggtttttaccccctgtcatttgggagtcttttggtttaccccc 39011257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 14101076 - 14101036
Alignment:
Q  324 cttggagattctccctcgccattagaagattctttgatttt 364  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  14101076 cttggagattcccccttgccattagaagattctttgatttt 14101036  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Complemental strand, 34315104 - 34315071
Alignment:
Q  378 atctgactggattaatgagctgatgtggcacgct 411  Q
    |||||||||||||||| |||||||||||||||||    
T  34315104 atctgactggattaataagctgatgtggcacgct 34315071  T

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Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 42480897 - 42480949
Alignment:
Q  258 agggttaataggcttttacctcctgtcatttgggggacttttgatttaccccc 310  Q
    |||||||||||||||||||| |||| ||||| ||||  ||||| |||||||||    
T  42480897 agggttaataggcttttaccccctgccatttaggggttttttggtttaccccc 42480949  T

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Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 324 - 427
Target Start/End: Complemental strand, 47863668 - 47863565
Alignment:
Q  324 cttggagattctccctcgccattagaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgctaactgtgtgatg 423  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47863668 cttggagattccccctcgtcattagaagattctttgattttcaaccctcaggcaatctgactggattaatgagctgatgtggcacgctaactgtgtgatg 47863569  T
Q  424 atgt 427  Q
    ||||    
T  47863568 atgt 47863565  T

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Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 348 - 419
Target Start/End: Complemental strand, 12862676 - 12862605
Alignment:
Q  348 gaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgctaactgtgt 419  Q
    |||||||||||||||||||||||| |    |||||||||||||||||||||||||||||||||| |||||||    
T  12862676 gaagattctttgattttcaaccctgatgtcatctgactggattaatgagctgatgtggcacgctgactgtgt 12862605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 348 - 419
Target Start/End: Complemental strand, 6658718 - 6658647
Alignment:
Q  348 gaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgctaactgtgt 419  Q
    |||||||||||||||||||||||  |    |||||||||||||||||||||||||||||||||| |||||||    
T  6658718 gaagattctttgattttcaacccggatgtcatctgactggattaatgagctgatgtggcacgctgactgtgt 6658647  T

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Target: chr4; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 348 - 419
Target Start/End: Original strand, 56083445 - 56083516
Alignment:
Q  348 gaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgctaactgtgt 419  Q
    ||||||||||||||||||||| || |  | ||||||||||||||||||| |||||||||||||| |||||||    
T  56083445 gaagattctttgattttcaactctgatgccatctgactggattaatgagttgatgtggcacgctgactgtgt 56083516  T

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Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 411
Target Start/End: Original strand, 47861936 - 47862086
Alignment:
Q  262 ttaataggcttttacctcctgtcatttgggggacttttgatttacccccctac--gnnnnnnnncttggagattctccctcgccattagaagattctttg 359  Q
    |||||||||||||||| |||| |||||||||| |||||| |||||||||||||  |        ||||||||| | |||| |||||||||||||||||||    
T  47861936 ttaataggcttttaccccctgccatttgggggtcttttggtttacccccctacgagaaaaaaaacttggagatccccccttgccattagaagattctttg 47862035  T
Q  360 attttcaaccctcagacaatctgactggattaatgagctgatgtggcacgct 411  Q
     ||| | |||  || || |||||| |||||||||| | |||| |||||||||    
T  47862036 gtttac-acctccaaaccatctgattggattaatgtggtgatttggcacgct 47862086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 16314256 - 16314198
Alignment:
Q  258 agggttaataggcttttacctcc-tgtcatttgggggacttttgatttacccccctacg 315  Q
    |||||||||||||||||||| || || |||||||||| |||||| ||||||||||||||    
T  16314256 agggttaataggcttttacccccctgccatttgggggtcttttggtttacccccctacg 16314198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 312
Target Start/End: Original strand, 17288631 - 17288685
Alignment:
Q  259 gggttaataggcttttacctcc-tgtcatttgggggacttttgatttacccccct 312  Q
    ||||||||||||||||||| || || ||||||||||||||||| |||||||||||    
T  17288631 gggttaataggcttttacccccctgccatttgggggacttttggtttacccccct 17288685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 16312768 - 16312809
Alignment:
Q  378 atctgactggattaatgagctgatgtggcacgctaactgtgt 419  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  16312768 atctgactggattaatgagatgatgtggcacgctgactgtgt 16312809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 313
Target Start/End: Original strand, 56083355 - 56083408
Alignment:
Q  260 ggttaataggcttttacctcctgtcatttgggggacttttgatttaccccccta 313  Q
    |||||||||||||||||| |||| |||||||||| |||||| | ||||||||||    
T  56083355 ggttaataggcttttaccccctgccatttgggggtcttttggtataccccccta 56083408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 6210672 - 6210712
Alignment:
Q  324 cttggagattctccctcgccattagaagattctttgatttt 364  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  6210672 cttggagattcccccttgccattagaagattctttgatttt 6210712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 23506443 - 23506383
Alignment:
Q  253 tttatagggttaataggcttttacctcc-tgtcatttgggggacttttgatttacccccct 312  Q
    ||||| ||||||||||||||||||| || || |||||||||| |||||| |||||||||||    
T  23506443 tttattgggttaataggcttttacccccctgccatttgggggtcttttggtttacccccct 23506383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 418
Target Start/End: Original strand, 47376598 - 47376693
Alignment:
Q  324 cttggagattctccctc-gccattagaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgctaactgtg 418  Q
    ||||||||||| ||| | ||||||||||||||||||| |||| |||||| | |  || ||||||||  ||| |||| |||||||||||| ||||||    
T  47376598 cttggagattccccccctgccattagaagattctttggttttgaaccctgatagcatgtgactggacaaattagcttatgtggcacgcttactgtg 47376693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 305
Target Start/End: Complemental strand, 6212553 - 6212504
Alignment:
Q  256 atagggttaataggcttttacctcctgtcatttgggggacttttgattta 305  Q
    ||||| |||||||| ||||||| ||||||||||||||| |||||| ||||    
T  6212553 ataggtttaataggtttttaccccctgtcatttgggggtcttttggttta 6212504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 12861410 - 12861463
Alignment:
Q  257 tagggttaataggcttttacctcctgtcatttgggggacttttgatttaccccc 310  Q
    ||||||||||||||||||||| ||||  |||||||||  ||||| |||||||||    
T  12861410 tagggttaataggcttttaccccctgctatttgggggtgttttggtttaccccc 12861463  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 23504892 - 23504949
Alignment:
Q  256 atagggttaataggctttta-cctcctgtcatttgggggacttttgatttacccccct 312  Q
    |||||||||||||||||||| || |||| |||||||||| |||||  |||||||||||    
T  23504892 atagggttaataggcttttacccccctgccatttgggggtctttttgtttacccccct 23504949  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 5169313 - 5169369
Alignment:
Q  259 gggttaataggcttttacctcc-tgtcatttgggggacttttgatttacccccctac 314  Q
    ||||||||||||||||||| || || |||||||| | |||||| |||||||||||||    
T  5169313 gggttaataggcttttacccccctgccatttgggcgtcttttggtttacccccctac 5169369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 17288812 - 17288768
Alignment:
Q  257 tagggttaataggctttta-cctcctgtcatttgggggacttttg 300  Q
    ||||||||||||||||||| || |||| |||||||||||||||||    
T  17288812 tagggttaataggcttttacccccctgccatttgggggacttttg 17288768  T

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Target: scaffold0262 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 258 - 426
Target Start/End: Original strand, 2759 - 2927
Alignment:
Q  258 agggttaataggctttta-cctcctgtcatttgggggacttttgatttacccccctacgnnnnnnnncttggagattctccctcgccattagaagattct 356  Q
    ||||||||||| |||||| || |||||||| |||| |||||||| |||||||||||| |        ||||||||||| |||| ||||||||||||||||    
T  2759 agggttaatagacttttatccccctgtcatatgggtgacttttggtttaccccccta-ggaaaaaaacttggagattcccccttgccattagaagattct 2857  T
Q  357 ttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgctaactgtgtgatgatg 426  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  2858 ttgattttcaaccctgaggcaatctgactggattaatgagctgatgtggcatgctgactgtgcgatgatg 2927  T

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Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 426
Target Start/End: Complemental strand, 11151579 - 11151478
Alignment:
Q  325 ttggagattctccctcgccattagaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgctaactgtgtgatga 424  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  11151579 ttggagattcccccttgccatgagaagattctttgattttcaaccctcagacaatctgactggattcatgagctgatgtggcacgttaactgtgtgatga 11151480  T
Q  425 tg 426  Q
    ||    
T  11151479 tg 11151478  T

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Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 36438828 - 36438770
Alignment:
Q  258 agggttaataggcttttacctcc-tgtcatttgggggacttttgatttacccccctacg 315  Q
    |||||||||||||||||||| || || |||||||||| |||||| ||||||||||||||    
T  36438828 agggttaataggcttttacccccctgccatttgggggtcttttggtttacccccctacg 36438770  T

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Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 48537849 - 48537902
Alignment:
Q  256 atagggttaataggcttttacctcctgtcatttgggggacttttgatttaccccc 310  Q
    |||||||||||||||||||||| |||| |||||||||| |||||| |||||||||    
T  48537849 atagggttaataggcttttacc-cctgccatttgggggtcttttggtttaccccc 48537902  T

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Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 381 - 417
Target Start/End: Original strand, 34825709 - 34825745
Alignment:
Q  381 tgactggattaatgagctgatgtggcacgctaactgt 417  Q
    ||||||||||||||||||||||||||||||| |||||    
T  34825709 tgactggattaatgagctgatgtggcacgctgactgt 34825745  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 36437336 - 36437376
Alignment:
Q  379 tctgactggattaatgagctgatgtggcacgctaactgtgt 419  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  36437336 tctgactggattaatgagatgatgtggcacgctgactgtgt 36437376  T

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Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 48165505 - 48165560
Alignment:
Q  258 agggttaataggcttttacctcctgtcatttgggggacttttgatttaccccccta 313  Q
    ||||||||||| ||||||| ||||| ||||||| || |||||| ||||||||||||    
T  48165505 agggttaatagacttttacttcctgccatttggaggtcttttggtttaccccccta 48165560  T

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Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Original strand, 54672720 - 54672782
Alignment:
Q  348 gaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgct 411  Q
    |||||||||||||||| || |||||| || || |||||||||||||| | ||||||||||||||    
T  54672720 gaagattctttgatttaca-ccctcaaaccatatgactggattaatgggatgatgtggcacgct 54672782  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 313
Target Start/End: Complemental strand, 15439735 - 15439678
Alignment:
Q  257 tagggttaataggcttttacctcct-gtcatttgggggacttttgatttaccccccta 313  Q
    ||||||||||||||||||||| ||  | |||||||||| |||||| ||||||||||||    
T  15439735 tagggttaataggcttttacccccccgccatttgggggtcttttggtttaccccccta 15439678  T

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Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 52042113 - 52042162
Alignment:
Q  257 tagggttaataggcttttacctcctgtcatttgggggacttttgatttac 306  Q
    ||||||||||||||||||||| |||||||| |||| | |||||| |||||    
T  52042113 tagggttaataggcttttaccccctgtcatatgggtgtcttttggtttac 52042162  T

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Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 11150270 - 11150326
Alignment:
Q  258 agggttaataggcttttacctcct-gtcatttgggggacttttgatttaccccccta 313  Q
    |||||||||||||||||||| ||  | ||||||||||| ||||| ||||||||||||    
T  11150270 agggttaataggcttttaccccccagccatttgggggatttttggtttaccccccta 11150326  T

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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 34799864 - 34799920
Alignment:
Q  258 agggttaataggcttttacctcc-tgtcatttgggggacttttgatttaccccccta 313  Q
    ||||||||||| |||||||| || || |||||||||| |||||| ||||||||||||    
T  34799864 agggttaatagacttttacccccctgccatttgggggtcttttggtttaccccccta 34799920  T

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Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 42278510 - 42278454
Alignment:
Q  258 agggttaataggcttttacctcc-tgtcatttgggggacttttgatttaccccccta 313  Q
    |||||||||||||||||||| || |  |||||||||| |||||| ||||||||||||    
T  42278510 agggttaataggcttttacccccctaccatttgggggtcttttggtttaccccccta 42278454  T

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Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 52090741 - 52090781
Alignment:
Q  324 cttggagattctccctcgccattagaagattctttgatttt 364  Q
    ||||||||| | |||||| ||||||||||||||||||||||    
T  52090741 cttggagatcccccctcgacattagaagattctttgatttt 52090781  T

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Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 327 - 426
Target Start/End: Complemental strand, 24304294 - 24304195
Alignment:
Q  327 ggagattctccctcgccattagaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgctaactgtgtgatgatg 426  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||  |||||||||||||| ||||||||||||||    
T  24304294 ggagatttcccctcgccattagaagattctttgattttcaaccctcaggcaatctgattggattaatgaattgatgtggcacgctgactgtgtgatgatg 24304195  T

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Target: chr1; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 348 - 419
Target Start/End: Complemental strand, 51676299 - 51676228
Alignment:
Q  348 gaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgctaactgtgt 419  Q
    |||||||||||||||||||||||| |  | ||||||||||||||||||  |||||||||||||| |||||||    
T  51676299 gaagattctttgattttcaaccctgatgccatctgactggattaatgaattgatgtggcacgctgactgtgt 51676228  T

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Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 43403352 - 43403296
Alignment:
Q  258 agggttaataggctttta-cctcctgtcatttgggggacttttgatttaccccccta 313  Q
    |||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||    
T  43403352 agggttaataggcttttatccccctgtcatttgggggtcttttggtttaccccccta 43403296  T

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Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 48030292 - 48030240
Alignment:
Q  257 tagggttaataggcttttacctcctgtcatttgggggacttttgatttacccc 309  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||| ||||||    
T  48030292 tagggttaataggcttttaccccctgccatttgggggtcttttgatatacccc 48030240  T

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Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 411
Target Start/End: Complemental strand, 9011032 - 9010958
Alignment:
Q  336 ccctcgccattagaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgct 411  Q
    |||| ||||||||||||||||||| ||| || ||| || || ||||||||||||||||| | ||||||||||||||    
T  9011032 cccttgccattagaagattctttggtttacacccc-caaaccatctgactggattaatgtgatgatgtggcacgct 9010958  T

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Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 411
Target Start/End: Complemental strand, 17242090 - 17242004
Alignment:
Q  324 cttggagattctccctcgccattagaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgct 411  Q
    |||| |||||| |||| ||||||||||||||||||| ||| | |||| || || |||||||| |||||||| | ||||||||||||||    
T  17242090 cttgtagattcccccttgccattagaagattctttggtttac-acccccaaaccatctgactagattaatgtgatgatgtggcacgct 17242004  T

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Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 411
Target Start/End: Original strand, 24302999 - 24303085
Alignment:
Q  324 cttggagattctccctcgccattagaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgct 411  Q
    ||||||||||| |||| || |||||||||||||||||||| | |||||||  | |||||| |||||||||| | |||| |||||||||    
T  24302999 cttggagattcccccttgcaattagaagattctttgatttac-accctcaagccatctgaatggattaatgtgatgatttggcacgct 24303085  T

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Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 21747941 - 21747998
Alignment:
Q  257 tagggttaataggcttttacctcc-tgtcatttgggggacttttgatttaccccccta 313  Q
    ||||||||||||||||||||| || || |||||||||| |||||| ||||||||||||    
T  21747941 tagggttaataggcttttacccccctgccatttgggggtcttttggtttaccccccta 21747998  T

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Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 35712574 - 35712615
Alignment:
Q  378 atctgactggattaatgagctgatgtggcacgctaactgtgt 419  Q
    ||||||||||||||||||||||||||| |||||| |||||||    
T  35712574 atctgactggattaatgagctgatgtgacacgctgactgtgt 35712615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 43402261 - 43402314
Alignment:
Q  257 tagggttaataggcttttacctcctgtcatttgggggacttttgatttaccccc 310  Q
    |||| |||||||||||||||| |||| |||||||||| |||||| |||||||||    
T  43402261 taggattaataggcttttaccccctgccatttgggggtcttttggtttaccccc 43402314  T

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Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 21749275 - 21749235
Alignment:
Q  324 cttggagattctccctcgccattagaagattctttgatttt 364  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  21749275 cttggagattcccccttgccattagaagattctttgatttt 21749235  T

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Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 9008761 - 9008812
Alignment:
Q  259 gggttaataggcttttacctcctgtcatttgggggacttttgatttaccccc 310  Q
    ||||||||||||||||||| |||| |||||||||| |||||| | |||||||    
T  9008761 gggttaataggcttttaccccctgccatttgggggtcttttggtataccccc 9008812  T

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Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 49383023 - 49383073
Alignment:
Q  260 ggttaataggcttttacctcctgtcatttgggggacttttgatttaccccc 310  Q
    ||||||||| |||||||| |||| ||||| ||||||||||| |||||||||    
T  49383023 ggttaatagacttttaccccctgccatttaggggacttttggtttaccccc 49383073  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 313
Target Start/End: Complemental strand, 51676392 - 51676335
Alignment:
Q  256 atagggttaataggcttttacctcctgtcatttgggggacttttgatttaccccccta 313  Q
    ||||||||||||| |||||||| ||||  ||||||||| |||||| | ||||||||||    
T  51676392 atagggttaatagacttttaccccctgctatttgggggtcttttggtataccccccta 51676335  T

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Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 42098785 - 42098729
Alignment:
Q  258 agggttaataggctttta-cctcctgtcatttgggggacttttgatttaccccccta 313  Q
    |||||||||||||||||| || |||| |||||||||| |||||| |||| |||||||    
T  42098785 agggttaataggcttttacccccctgccatttgggggtcttttggtttatcccccta 42098729  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 49384486 - 49384446
Alignment:
Q  324 cttggagattctccctcgccattagaagattctttgatttt 364  Q
    ||||||||||| ||||||||||| |||||||||||| ||||    
T  49384486 cttggagattccccctcgccatttgaagattctttggtttt 49384446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 419
Target Start/End: Complemental strand, 27491238 - 27491167
Alignment:
Q  348 gaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgctaactgtgt 419  Q
    |||||||||||| ||| || |||| |  | |||||||||||| |||||||||||||||||||||||||||||    
T  27491238 gaagattctttggtttacacccctgatgccatctgactggatcaatgagctgatgtggcacgctaactgtgt 27491167  T

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Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 312
Target Start/End: Original strand, 29875946 - 29876000
Alignment:
Q  258 agggttaataggcttttacctcctgtcatttgggggacttttgatttacccccct 312  Q
    |||||||||||||||||||| |||| |||||||| ||| |||| |||||||||||    
T  29875946 agggttaataggcttttaccccctgccatttgggcgacatttggtttacccccct 29876000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 27490097 - 27490151
Alignment:
Q  257 tagggttaataggcttttacct-cctgtcatttgggggacttttgatttaccccc 310  Q
    |||||||||||||||||||||| |||||||| |||||| |||||| | |||||||    
T  27490097 tagggttaataggcttttacctccctgtcatatgggggtcttttggtataccccc 27490151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 27491329 - 27491287
Alignment:
Q  258 agggttaataggcttttacctcctgtcatttgggggacttttg 300  Q
    |||||||||||||||||||| ||||  ||||||||||||||||    
T  27491329 agggttaataggcttttaccccctgcaatttgggggacttttg 27491287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 3977 - 3925
Alignment:
Q  258 agggttaataggcttttacctcctgtcatttgggggacttttgatttaccccc 310  Q
    |||||||||||||||||||| |||| ||||||||||||||||| |||| ||||    
T  3977 agggttaataggcttttaccccctgccatttgggggacttttggtttatcccc 3925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 312
Target Start/End: Original strand, 386 - 440
Alignment:
Q  259 gggttaataggcttttacctcc-tgtcatttgggggacttttgatttacccccct 312  Q
    ||||||||||||||||||| || || ||||||||||||||||| |||||| ||||    
T  386 gggttaataggcttttacccccctgccatttgggggacttttggtttacctccct 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 411
Target Start/End: Original strand, 5737244 - 5737330
Alignment:
Q  324 cttggagattctccctcgccattagaagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggcacgct 411  Q
    |||| |||||| |||| ||||||||||||||||||| ||| | |||| || || |||||||| |||||||| | ||||||||||||||    
T  5737244 cttgtagattcccccttgccattagaagattctttggtttac-acccccaaaccatctgactagattaatgtgatgatgtggcacgct 5737330  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 19628235 - 19628181
Alignment:
Q  259 gggttaataggcttttacctcctgtcatttgggggacttttgatttaccccccta 313  Q
    ||||||||||| ||||||| |||| |||||||| | |||||| ||||||||||||    
T  19628235 gggttaataggtttttaccccctgccatttgggagtcttttggtttaccccccta 19628181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 419
Target Start/End: Complemental strand, 47578535 - 47578501
Alignment:
Q  385 tggattaatgagctgatgtggcacgctaactgtgt 419  Q
    ||||||||||||||||||||||||||| |||||||    
T  47578535 tggattaatgagctgatgtggcacgctgactgtgt 47578501  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 12628031 - 12628088
Alignment:
Q  257 tagggttaataggctttta-cctcctgtcatttgggggacttttgatttaccccccta 313  Q
    ||||||||||||||||||| || |||| |||||| ||| |||||| ||||||||||||    
T  12628031 tagggttaataggcttttacccccctgccatttgcgggtcttttggtttaccccccta 12628088  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 12603936 - 12603991
Alignment:
Q  258 agggttaataggcttttacctcctgtcatttgggggacttttgatttaccccccta 313  Q
    |||||||||||||||||||| |||| |||||||| | |||||| ||||||||||||    
T  12603936 agggttaataggcttttaccccctgccatttgggagtcttttggtttaccccccta 12603991  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 26545920 - 26545868
Alignment:
Q  261 gttaataggcttttacctcctgtcatttgggggacttttgatttaccccccta 313  Q
    ||||||||||||||||| |||| |||||| ||| |||||| ||||||||||||    
T  26545920 gttaataggcttttaccccctgccatttgagggtcttttggtttaccccccta 26545868  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 32146149 - 32146093
Alignment:
Q  256 atagggttaataggctttta-cctcctgtcatttgggggacttttgatttacccccc 311  Q
    |||||||||||||||||||| || |||| |||||||||| |||||| ||||||||||    
T  32146149 atagggttaataggcttttatccccctgccatttgggggtcttttggtttacccccc 32146093  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 25483454 - 25483399
Alignment:
Q  258 agggttaataggcttttacctcctgtcatttgggggacttttgatttaccccccta 313  Q
    |||||||||||||||||||| |||| |||||||| | ||||||  |||||||||||    
T  25483454 agggttaataggcttttaccccctgccatttgggagtcttttggattaccccccta 25483399  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 5859019 - 5859059
Alignment:
Q  378 atctgactggattaatgagctgatgtggcacgctaactgtg 418  Q
    |||||| |||||||||||| |||||||||||||| ||||||    
T  5859019 atctgattggattaatgagatgatgtggcacgctgactgtg 5859059  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 364
Target Start/End: Complemental strand, 9307129 - 9307089
Alignment:
Q  324 cttggagattctccctcgccattagaagattctttgatttt 364  Q
    ||||||||||| ||||||||||| ||| |||||||||||||    
T  9307129 cttggagattccccctcgccatttgaatattctttgatttt 9307089  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 411
Target Start/End: Complemental strand, 29043555 - 29043522
Alignment:
Q  378 atctgactggattaatgagctgatgtggcacgct 411  Q
    ||||||||||||||||||||||||||||||||||    
T  29043555 atctgactggattaatgagctgatgtggcacgct 29043522  T

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Target: scaffold0408 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0408
Description:

Target: scaffold0408; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 10085 - 10136
Alignment:
Q  257 tagggttaataggcttttacctcctgtcatttgggggacttttgatttacccc 309  Q
    ||||||||||||||||||||| |||| |||||||||| |||||| ||||||||    
T  10085 tagggttaataggcttttacc-cctgccatttgggggtcttttggtttacccc 10136  T

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Target: scaffold0484 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 11534 - 11587
Alignment:
Q  257 tagggttaataggcttttacctcctgtcatttgggggacttttgatttaccccc 310  Q
    ||||||||||||||||||||| |||| |||||||| | ||||||  ||||||||    
T  11534 tagggttaataggcttttaccccctgccatttgggagtcttttggattaccccc 11587  T

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Target: scaffold0071 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 22456 - 22513
Alignment:
Q  257 tagggttaataggcttttacctcct-gtcatttgggggacttttgatttaccccccta 313  Q
    ||||||||||||||||||||| ||  | |||||||||| |||||| ||||||||||||    
T  22456 tagggttaataggcttttacccccccgccatttgggggtcttttggtttaccccccta 22513  T

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Target: scaffold0061 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 406
Target Start/End: Original strand, 9880 - 9936
Alignment:
Q  349 aagattctttgattttcaaccctcagacaatctgactggattaatgagctgatgtggc 406  Q
    ||||||||||||||| |  |||| |||| ||||||||||||||||||| |||||||||    
T  9880 aagattctttgatttacc-ccctaagaccatctgactggattaatgagatgatgtggc 9936  T

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