View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13823_low_15 (Length: 372)
Name: NF13823_low_15
Description: NF13823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13823_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 22 - 360
Target Start/End: Original strand, 30638001 - 30638339
Alignment:
| Q |
22 |
gtgtgttggtaagcattttcaaagtgaaggattatagtgcttcaaagttcgtcatggtttaatcaccgaaagcaagtaattgaagaaagaaccgaaaaca |
121 |
Q |
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| T |
30638001 |
gtgtgttggtaagcattttcaaagtgaaggattatagtgcttcaaagttcgtcatggtttaatcaccgaaagcaaataattgaagaaagaatcgaaaaca |
30638100 |
T |
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| Q |
122 |
aagagactattgctctagtgtttcaaatcttgaccactattataacagacttgagttatttaatgttattatttctaaatataccctttatttatgaaca |
221 |
Q |
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| T |
30638101 |
aagagactattgctctagtgtttcaaatcttgaccactattataacatacttgagttatttaatgttattatttctaaatataccctttatttatgaaca |
30638200 |
T |
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| Q |
222 |
taatttttccaaaaagacaatttagtaaatttcaagtgtgttttacaacaccctatatcctttagaaagtcaataaaatctggtagagtttccaaagcat |
321 |
Q |
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| T |
30638201 |
taatttttccaaaaagacaatttagtaaatttcaagtgtgttttacaacaccctatatcctttagaaagtcaataaaatctggtagagcttccaaagcat |
30638300 |
T |
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| Q |
322 |
aattttgaagattgccaatgatattcaactaatattcat |
360 |
Q |
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| T |
30638301 |
aattttgaagattgccaatgatattcaactaatattcat |
30638339 |
T |
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