View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13823_low_17 (Length: 360)
Name: NF13823_low_17
Description: NF13823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13823_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 83 - 347
Target Start/End: Original strand, 43600967 - 43601231
Alignment:
| Q |
83 |
gtgaaaacaatatgtaactgttctaatgaagttattatcggtaggaacatnnnnnnnctcatatttggtatttgttctggaaaaaatactgttagattat |
182 |
Q |
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| T |
43600967 |
gtgaaaacaatatgtaactgttctaatgaagttattatcggtaggaacataaaaaaactcatatttggtatttgttctggaaaaaatactgttagattat |
43601066 |
T |
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| Q |
183 |
tggcaggagagagggacattttaatttactctatttttattgttttgaaacgatactttttctttactcaataaaagctctttcttaattatttttacaa |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||| |
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| T |
43601067 |
tggcaggagagagggacattttaatttactctatttttattgttttgaaacgatactttttctttacttaataaaagcactttcttaattatatttacaa |
43601166 |
T |
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| Q |
283 |
atctcattcatgagaatgtaataatgtaaaatgaaatgaactatatgcgtatctttcttcttctc |
347 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43601167 |
atctcattcatgagaatgtaataatgtaaaatgaaatgaactatatgcgtatctttcttcttctc |
43601231 |
T |
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