View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13823_low_29 (Length: 270)

Name: NF13823_low_29
Description: NF13823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13823_low_29
NF13823_low_29
[»] chr3 (68 HSPs)
chr3 (1-161)||(49951547-49951707)
chr3 (1-161)||(44676857-44677017)
chr3 (1-159)||(38535312-38535470)
chr3 (1-161)||(51473240-51473401)
chr3 (1-159)||(43678298-43678456)
chr3 (1-158)||(55389609-55389766)
chr3 (1-159)||(32730774-32730932)
chr3 (22-159)||(49720767-49720904)
chr3 (1-159)||(41998232-41998391)
chr3 (1-159)||(50662797-50662955)
chr3 (1-159)||(51828925-51829083)
chr3 (1-159)||(2051298-2051460)
chr3 (1-159)||(47431699-47431858)
chr3 (1-159)||(51828342-51828501)
chr3 (22-158)||(329850-329986)
chr3 (1-161)||(40839037-40839197)
chr3 (1-159)||(46013807-46013966)
chr3 (1-159)||(51827960-51828118)
chr3 (1-159)||(52237202-52237360)
chr3 (3-159)||(330223-330379)
chr3 (28-159)||(16701201-16701335)
chr3 (1-161)||(40838653-40838813)
chr3 (1-159)||(25534893-25535052)
chr3 (1-156)||(34104644-34104798)
chr3 (1-159)||(51828542-51828701)
chr3 (1-159)||(40275479-40275636)
chr3 (1-159)||(52375716-52375874)
chr3 (1-161)||(32730390-32730550)
chr3 (1-159)||(49951931-49952089)
chr3 (1-159)||(55389982-55390140)
chr3 (47-159)||(14654202-14654314)
chr3 (1-160)||(22370598-22370758)
chr3 (23-161)||(16689359-16689497)
chr3 (1-159)||(46013425-46013583)
chr3 (1-159)||(49720374-49720532)
chr3 (1-159)||(52236819-52236977)
chr3 (1-159)||(52375330-52375488)
chr3 (1-159)||(40275096-40275256)
chr3 (1-159)||(14654576-14654732)
chr3 (1-159)||(38535680-38535838)
chr3 (1-159)||(44676475-44676633)
chr3 (1-159)||(30513725-30513883)
chr3 (1-159)||(2044274-2044432)
chr3 (1-159)||(43678669-43678827)
chr3 (1-159)||(51472858-51473016)
chr3 (1-159)||(43222393-43222551)
chr3 (1-156)||(34105033-34105190)
chr3 (28-159)||(36701508-36701639)
chr3 (1-159)||(39010078-39010235)
chr3 (30-159)||(41998643-41998771)
chr3 (2-159)||(49407799-49407955)
chr3 (1-159)||(43222774-43222933)
chr3 (63-149)||(39010468-39010554)
chr3 (2-159)||(55192121-55192277)
chr3 (28-159)||(50900940-50901070)
chr3 (63-161)||(27199703-27199801)
chr3 (63-159)||(36701109-36701206)
chr3 (9-159)||(27200085-27200234)
chr3 (71-159)||(33412609-33412697)
chr3 (63-159)||(37075689-37075785)
chr3 (87-159)||(49408252-49408324)
chr3 (63-161)||(8874133-8874231)
chr3 (51-159)||(12141125-12141234)
chr3 (28-161)||(2323380-2323512)
chr3 (54-159)||(37076112-37076217)
chr3 (2-125)||(37847206-37847328)
chr3 (87-160)||(8873693-8873765)
chr3 (63-159)||(50900535-50900631)
[»] chr4 (60 HSPs)
chr4 (1-159)||(34789385-34789543)
chr4 (1-159)||(12593027-12593185)
chr4 (13-159)||(28465478-28465624)
chr4 (1-159)||(56077709-56077867)
chr4 (1-159)||(14440213-14440371)
chr4 (1-159)||(21034238-21034397)
chr4 (1-159)||(54440954-54441112)
chr4 (1-159)||(26974286-26974445)
chr4 (1-161)||(41114158-41114320)
chr4 (1-159)||(46736658-46736816)
chr4 (1-161)||(45838932-45839094)
chr4 (22-161)||(33777633-33777772)
chr4 (11-161)||(28166005-28166155)
chr4 (1-161)||(14439829-14439989)
chr4 (1-159)||(34789767-34789926)
chr4 (1-159)||(36168716-36168874)
chr4 (1-159)||(28465084-28465242)
chr4 (1-159)||(46737040-46737198)
chr4 (1-161)||(6616673-6616834)
chr4 (1-159)||(54440574-54440730)
chr4 (1-159)||(55677342-55677501)
chr4 (1-159)||(12593408-12593566)
chr4 (1-159)||(19528872-19529031)
chr4 (1-159)||(21034621-21034780)
chr4 (1-159)||(34807119-34807278)
chr4 (9-159)||(33689832-33689981)
chr4 (1-162)||(16214880-16215041)
chr4 (1-161)||(34807524-34807684)
chr4 (11-155)||(45838554-45838698)
chr4 (1-159)||(24851850-24852009)
chr4 (1-161)||(41608375-41608536)
chr4 (1-159)||(19529078-19529237)
chr4 (1-161)||(35643556-35643728)
chr4 (1-161)||(229544-229704)
chr4 (22-159)||(33778018-33778155)
chr4 (9-161)||(36168330-36168485)
chr4 (71-159)||(24851319-24851407)
chr4 (22-161)||(6617068-6617207)
chr4 (2-148)||(35193322-35193467)
chr4 (74-159)||(1397598-1397683)
chr4 (71-159)||(41608870-41608958)
chr4 (54-137)||(17504397-17504480)
chr4 (1-161)||(229162-229322)
chr4 (34-159)||(26974662-26974788)
chr4 (48-159)||(23986523-23986635)
chr4 (3-159)||(24335764-24335920)
chr4 (30-159)||(40160097-40160225)
chr4 (1-68)||(24851559-24851626)
chr4 (28-161)||(40160503-40160635)
chr4 (1-159)||(18965143-18965301)
chr4 (2-159)||(17503977-17504133)
chr4 (89-159)||(44219378-44219448)
chr4 (55-156)||(30597958-30598059)
chr4 (96-159)||(35644042-35644105)
chr4 (63-159)||(51309951-51310048)
chr4 (87-159)||(24336234-24336306)
chr4 (28-72)||(35643970-35644014)
chr4 (85-159)||(10795780-10795854)
chr4 (62-159)||(35193748-35193845)
chr4 (87-159)||(12930807-12930879)
[»] chr8 (36 HSPs)
chr8 (1-161)||(18428146-18428307)
chr8 (3-157)||(18049595-18049750)
chr8 (1-159)||(15256213-15256374)
chr8 (1-159)||(34799082-34799241)
chr8 (1-159)||(16578481-16578639)
chr8 (30-159)||(41260274-41260403)
chr8 (1-159)||(28254428-28254587)
chr8 (1-159)||(599883-600041)
chr8 (1-159)||(9797111-9797270)
chr8 (1-159)||(5730820-5730978)
chr8 (1-159)||(9796729-9796887)
chr8 (1-159)||(42035775-42035933)
chr8 (1-159)||(599535-599693)
chr8 (1-159)||(28254811-28254969)
chr8 (22-159)||(15255856-15255993)
chr8 (3-161)||(18049978-18050136)
chr8 (1-159)||(35427197-35427355)
chr8 (28-159)||(2208717-2208849)
chr8 (1-159)||(34799468-34799626)
chr8 (1-159)||(41260646-41260804)
chr8 (14-159)||(16578111-16578256)
chr8 (1-161)||(35694255-35694423)
chr8 (1-159)||(5731197-5731355)
chr8 (1-159)||(7911001-7911159)
chr8 (1-159)||(35693871-35694031)
chr8 (1-137)||(42036156-42036293)
chr8 (1-159)||(6115495-6115654)
chr8 (1-83)||(35426892-35426974)
chr8 (1-159)||(7910619-7910778)
chr8 (9-133)||(26252838-26252962)
chr8 (111-161)||(35426843-35426893)
chr8 (54-159)||(18674151-18674256)
chr8 (2-161)||(28877276-28877434)
chr8 (2-162)||(18805164-18805322)
chr8 (46-135)||(10047066-10047155)
chr8 (55-162)||(2617745-2617853)
[»] chr7 (53 HSPs)
chr7 (1-160)||(25637583-25637742)
chr7 (1-159)||(7732872-7733030)
chr7 (1-159)||(9181535-9181693)
chr7 (1-159)||(15712368-15712526)
chr7 (1-160)||(5745641-5745800)
chr7 (1-159)||(48247976-48248135)
chr7 (1-159)||(16081684-16081842)
chr7 (1-161)||(26026703-26026863)
chr7 (1-159)||(14311672-14311830)
chr7 (1-159)||(16081302-16081460)
chr7 (1-159)||(786785-786944)
chr7 (13-159)||(27245601-27245747)
chr7 (42-159)||(16917716-16917833)
chr7 (1-159)||(7732491-7732649)
chr7 (9-159)||(28687596-28687746)
chr7 (1-159)||(11971337-11971499)
chr7 (1-162)||(28687884-28688044)
chr7 (1-159)||(26048332-26048489)
chr7 (22-159)||(5333883-5334020)
chr7 (1-159)||(39388651-39388811)
chr7 (1-162)||(26026317-26026479)
chr7 (3-159)||(25637200-25637357)
chr7 (1-159)||(9181794-9181955)
chr7 (1-159)||(24929688-24929851)
chr7 (1-159)||(27245206-27245365)
chr7 (11-156)||(35161196-35161342)
chr7 (1-159)||(2758083-2758241)
chr7 (1-159)||(5746024-5746183)
chr7 (1-159)||(48247590-48247752)
chr7 (1-159)||(26047960-26048109)
chr7 (54-159)||(5334257-5334362)
chr7 (2-159)||(9394117-9394272)
chr7 (1-159)||(34595157-34595315)
chr7 (1-161)||(11973787-11973947)
chr7 (1-161)||(787167-787331)
chr7 (1-159)||(14311318-14311477)
chr7 (71-161)||(35160654-35160746)
chr7 (10-68)||(5184488-5184546)
chr7 (2-159)||(35578902-35579058)
chr7 (23-159)||(49064037-49064172)
chr7 (97-161)||(40669689-40669753)
chr7 (72-159)||(39136689-39136776)
chr7 (74-159)||(39136991-39137076)
chr7 (28-159)||(9393739-9393869)
chr7 (1-160)||(33880970-33881133)
chr7 (30-159)||(34594586-34594714)
chr7 (43-159)||(4477705-4477821)
chr7 (28-72)||(35160892-35160936)
chr7 (63-159)||(45815347-45815441)
chr7 (111-161)||(5184429-5184479)
chr7 (195-231)||(21420053-21420089)
chr7 (24-159)||(35579294-35579428)
chr7 (198-234)||(44832838-44832874)
[»] chr5 (34 HSPs)
chr5 (3-257)||(8419008-8419257)
chr5 (1-159)||(28290029-28290187)
chr5 (1-159)||(15029694-15029852)
chr5 (22-159)||(18149736-18149873)
chr5 (1-159)||(19291359-19291518)
chr5 (1-159)||(21371081-21371239)
chr5 (9-158)||(38900648-38900797)
chr5 (1-159)||(28289687-28289845)
chr5 (1-159)||(15115480-15115635)
chr5 (1-159)||(18150108-18150267)
chr5 (1-159)||(38901027-38901183)
chr5 (1-159)||(4967154-4967314)
chr5 (4-160)||(4966818-4966973)
chr5 (1-159)||(39083362-39083521)
chr5 (14-161)||(21370687-21370842)
chr5 (1-159)||(32697608-32697769)
chr5 (1-160)||(14340792-14340954)
chr5 (85-160)||(14340400-14340475)
chr5 (2-159)||(10721789-10721945)
chr5 (1-124)||(5161620-5161744)
chr5 (1-159)||(22651348-22651506)
chr5 (22-159)||(5161974-5162112)
chr5 (2-159)||(27307064-27307220)
chr5 (2-159)||(16752585-16752741)
chr5 (21-161)||(20266320-20266460)
chr5 (72-159)||(22651767-22651854)
chr5 (2-159)||(27307444-27307603)
chr5 (2-159)||(28494847-28495003)
chr5 (72-159)||(17260676-17260763)
chr5 (30-159)||(41834473-41834602)
chr5 (48-137)||(13557017-13557106)
chr5 (2-159)||(16752955-16753113)
chr5 (2-137)||(32305843-32305977)
chr5 (86-159)||(28495301-28495374)
[»] chr2 (53 HSPs)
chr2 (1-159)||(38008336-38008494)
chr2 (1-159)||(20127739-20127898)
chr2 (1-159)||(11539640-11539799)
chr2 (1-159)||(4356141-4356299)
chr2 (1-159)||(4809264-4809422)
chr2 (1-161)||(13315494-13315658)
chr2 (1-159)||(33920996-33921155)
chr2 (1-159)||(62960-63118)
chr2 (1-159)||(20128122-20128280)
chr2 (3-159)||(43160397-43160554)
chr2 (1-159)||(6949454-6949613)
chr2 (1-159)||(42192243-42192401)
chr2 (1-159)||(16952938-16953098)
chr2 (1-159)||(17060909-17061069)
chr2 (1-159)||(4355758-4355916)
chr2 (1-158)||(16175734-16175892)
chr2 (1-159)||(43216094-43216252)
chr2 (1-159)||(44219647-44219805)
chr2 (13-161)||(15551071-15551220)
chr2 (3-159)||(38007953-38008110)
chr2 (1-159)||(11540023-11540181)
chr2 (1-159)||(16953319-16953477)
chr2 (1-159)||(42192627-42192786)
chr2 (54-159)||(5560054-5560159)
chr2 (1-159)||(44220028-44220188)
chr2 (3-159)||(13399807-13399962)
chr2 (1-159)||(33920615-33920773)
chr2 (10-159)||(649530-649679)
chr2 (1-161)||(15550674-15550835)
chr2 (1-159)||(4808882-4809040)
chr2 (30-159)||(32418560-32418689)
chr2 (1-159)||(32418162-32418318)
chr2 (1-159)||(43160012-43160171)
chr2 (1-130)||(13399454-13399583)
chr2 (1-161)||(63343-63509)
chr2 (1-159)||(24140064-24140217)
chr2 (31-161)||(9330209-9330340)
chr2 (22-159)||(6949848-6949987)
chr2 (80-159)||(649801-649880)
chr2 (4-159)||(31797166-31797320)
chr2 (1-89)||(5560935-5561023)
chr2 (63-159)||(25336047-25336143)
chr2 (2-159)||(28143416-28143572)
chr2 (100-161)||(9329913-9329974)
chr2 (49-161)||(20495194-20495307)
chr2 (20-159)||(14942248-14942389)
chr2 (101-161)||(9329831-9329892)
chr2 (51-122)||(5035903-5035975)
chr2 (87-161)||(3824179-3824253)
chr2 (1-161)||(22445640-22445801)
chr2 (76-152)||(2190536-2190612)
chr2 (55-160)||(3822923-3823029)
chr2 (1-66)||(43215805-43215870)
[»] chr1 (57 HSPs)
chr1 (1-161)||(21938564-21938724)
chr1 (1-159)||(37505070-37505229)
chr1 (1-159)||(34555765-34555925)
chr1 (1-159)||(9992157-9992316)
chr1 (1-159)||(44954611-44954769)
chr1 (1-159)||(16299067-16299224)
chr1 (1-159)||(10278935-10279090)
chr1 (1-159)||(30786774-30786933)
chr1 (1-157)||(4080026-4080182)
chr1 (3-159)||(9992542-9992698)
chr1 (1-159)||(10278551-10278710)
chr1 (3-161)||(50305169-50305330)
chr1 (1-159)||(1837508-1837666)
chr1 (1-159)||(52335895-52336053)
chr1 (1-160)||(17641749-17641913)
chr1 (1-161)||(37421161-37421323)
chr1 (1-159)||(2867914-2868072)
chr1 (1-159)||(2868093-2868251)
chr1 (1-159)||(44582060-44582218)
chr1 (1-159)||(44954229-44954387)
chr1 (1-161)||(8230026-8230186)
chr1 (1-159)||(44582442-44582602)
chr1 (22-162)||(29439327-29439468)
chr1 (1-159)||(37505453-37505610)
chr1 (30-159)||(16298685-16298814)
chr1 (1-159)||(29438933-29439092)
chr1 (1-159)||(443936-444094)
chr1 (1-159)||(23340186-23340344)
chr1 (60-161)||(37421388-37421490)
chr1 (1-159)||(34555382-34555542)
chr1 (63-159)||(30787245-30787341)
chr1 (43-161)||(39485066-39485184)
chr1 (1-124)||(17641403-17641526)
chr1 (2-160)||(45048157-45048314)
chr1 (1-162)||(6224697-6224860)
chr1 (1-159)||(8229640-8229801)
chr1 (9-155)||(23526665-23526811)
chr1 (69-159)||(50304442-50304532)
chr1 (2-159)||(44802557-44802714)
chr1 (1-159)||(1744331-1744488)
chr1 (1-136)||(29020906-29021041)
chr1 (28-161)||(45048548-45048680)
chr1 (28-159)||(50926653-50926784)
chr1 (1-134)||(9833537-9833670)
chr1 (54-159)||(17088577-17088682)
chr1 (55-158)||(25274760-25274863)
chr1 (72-159)||(50926233-50926320)
chr1 (4-159)||(29021252-29021408)
chr1 (22-159)||(23526936-23527073)
chr1 (63-159)||(44291304-44291401)
chr1 (88-161)||(50419391-50419464)
chr1 (28-161)||(44291723-44291856)
chr1 (3-68)||(50304876-50304941)
chr1 (2-159)||(17088149-17088310)
chr1 (89-156)||(39843497-39843564)
chr1 (54-122)||(36229417-36229486)
chr1 (87-159)||(50419731-50419803)
[»] chr6 (27 HSPs)
chr6 (9-160)||(24640578-24640729)
chr6 (1-159)||(25472397-25472556)
chr6 (1-159)||(5114471-5114629)
chr6 (1-159)||(31574110-31574268)
chr6 (3-159)||(5120856-5121012)
chr6 (1-159)||(31073527-31073685)
chr6 (9-159)||(30251084-30251235)
chr6 (1-159)||(31573723-31573886)
chr6 (3-161)||(25468850-25469010)
chr6 (1-159)||(29891465-29891627)
chr6 (1-159)||(29891083-29891241)
chr6 (18-159)||(28636295-28636435)
chr6 (28-159)||(31073146-31073284)
chr6 (1-89)||(28636581-28636669)
chr6 (2-159)||(35163572-35163730)
chr6 (48-159)||(32836428-32836539)
chr6 (43-161)||(35163185-35163303)
chr6 (18-159)||(33095717-33095858)
chr6 (18-159)||(33096009-33096154)
chr6 (90-161)||(31242807-31242878)
chr6 (111-159)||(22534219-22534267)
chr6 (17-159)||(835397-835538)
chr6 (1-79)||(30250774-30250852)
chr6 (111-159)||(30250724-30250772)
chr6 (89-159)||(18297662-18297732)
chr6 (87-161)||(32836008-32836082)
chr6 (203-231)||(34638665-34638693)
[»] scaffold0097 (2 HSPs)
scaffold0097 (4-159)||(46655-46811)
scaffold0097 (1-159)||(46269-46428)
[»] scaffold0712 (2 HSPs)
scaffold0712 (3-159)||(6395-6551)
scaffold0712 (1-161)||(6776-6941)
[»] scaffold0709 (2 HSPs)
scaffold0709 (3-159)||(6413-6569)
scaffold0709 (1-161)||(6794-6959)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-79)||(78400-78478)
[»] scaffold0007 (3 HSPs)
scaffold0007 (2-159)||(205754-205910)
scaffold0007 (72-159)||(210793-210880)
scaffold0007 (64-161)||(204929-205027)
[»] scaffold1432 (1 HSPs)
scaffold1432 (55-159)||(504-608)
[»] scaffold0021 (1 HSPs)
scaffold0021 (18-143)||(159283-159408)


Alignment Details
Target: chr3 (Bit Score: 129; Significance: 8e-67; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 49951707 - 49951547
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  49951707 actaaaactgttatttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 49951608  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49951607 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 49951547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 44676857 - 44677017
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  44676857 actaaaactgtcatttatgtgcgtttctggagttgaaaatagagagataggactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 44676956  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44676957 aaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 44677017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 38535470 - 38535312
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||||||    
T  38535470 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactgaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 38535371  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38535370 aaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaattaa 38535312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 51473240 - 51473401
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  51473240 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 51473339  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51473340 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaaac 51473401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 43678456 - 43678298
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| |||||  || |||||||||||||||||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  43678456 actaaaactgtcatttatgtgcgcttctggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 43678357  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43678356 aaaaagatatgaccatgttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 43678298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 55389766 - 55389609
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  55389766 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 55389667  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 158  Q
    |||||| || ||||||||||||||||||||| |||||| |||||||||||||||||||    
T  55389666 aaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaatta 55389609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 32730774 - 32730932
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  32730774 actaaaactgtcatttctgtgcgtttctggagtttgaaatagggagataggattaaaactgcaaaaaacatatagtttaaggacgattttgttcaattta 32730873  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  32730874 aaaaagataggaccattttcttgagttggttaaaatggtatgaccaaaagtgtaattaa 32730932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 49720767 - 49720904
Alignment:
Q  22 catttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcg 121  Q
    ||||| |||||||||||||||||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  49720767 catttctggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcg 49720866  T
Q  122 tgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  49720867 tgagttggtcaaaatagtaggaccaaaagtgtaattaa 49720904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 41998391 - 41998232
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||| | ||| |||||||||||||||||||||| || ||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  41998391 actaaaactgtcatttctgttcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 41998292  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41998291 aaaaaagataggaccattttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaa 41998232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 50662797 - 50662955
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  50662797 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagctaggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 50662896  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||||||||||| |||||||    
T  50662897 aaaaagatatgactattttcgtgagtttgtcaaaatggtaggaccaaaagtataattaa 50662955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 51828925 - 51829083
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| || |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||| || |||    
T  51828925 actaaaactgtcatttatgtgcgtttatgaagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgtttgaatta 51829024  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  51829025 aaaaagatacgaccattttcgtgagttgatcaaaatagtatgaccaaaagtgtaattaa 51829083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 2051460 - 2051298
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa----catatagtttaaggatgattttgttcga 96  Q
    ||||||| |||||||||||||| ||| ||||||| |||||||||| |||||| ||||| |||||||||    ||||||||||||| | ||||||||||||    
T  2051460 actaaaactgtcatttttgtgcgtttctggagttagaaatagggaaataggaataaaactgcaaaaaaaaaacatatagtttaagaacgattttgttcga 2051361  T
Q  97 tttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2051360 tttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 2051298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 47431858 - 47431699
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| ||||||| ||||||||||||||||| ||||| ||||||||| |||||||||||| || |||||||||||||||    
T  47431858 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgattt 47431759  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47431758 aaaagaggtatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 47431699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 51828342 - 51828501
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| | ||| ||| ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||  ||||||||||||||    
T  51828342 actaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacaattttgttcgattt 51828441  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51828442 aaaaaatatatgaccattttcgtgagttggtcaaagtggtaggaccaaaagtgtaattaa 51828501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 22 - 158
Target Start/End: Complemental strand, 329986 - 329850
Alignment:
Q  22 catttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcg 121  Q
    ||||| |||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  329986 catttatggagttggaaacagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagttaggaccattttcg 329887  T
Q  122 tgagttggtcaaaatggtaggaccaaaagtgtaatta 158  Q
    ||||||||||||||||| || ||||||||||||||||    
T  329886 tgagttggtcaaaatggaagaaccaaaagtgtaatta 329850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 40839037 - 40839197
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  40839037 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 40839136  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||| || || ||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  40839137 aaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaaac 40839197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 46013807 - 46013966
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  46013807 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 46013906  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||  |||||||| | ||||||||||||||| ||| |||||||||||||||||    
T  46013907 aaaaaagatagaaccatttttgggagttggtcaaaatgatagtaccaaaagtgtaattaa 46013966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 51828118 - 51827960
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  51828118 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaaatgcaaaaaacatatagtttagggacgattttgttcgattta 51828019  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  51828018 aaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 51827960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 52237202 - 52237360
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| |||  |||||| ||||||||||||||||| ||||| ||||||||||||||| |||| ||| ||||||||||||||||    
T  52237202 actaaaactgtcatttctgtgcgtttccggagttagaaatagggagataggactaaaactgcaaaaaacatataatttagggacgattttgttcgattta 52237301  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  52237302 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 52237360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 330223 - 330379
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaa 102  Q
    ||||| |||||||| ||||| ||| | |||||||||||||||||||| || ||||| |||||||||||||||||||| ||| ||||||||| ||||||||    
T  330223 taaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacatatagtttagggacgattttgtttgatttaaa 330322  T
Q  103 aaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || |||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  330323 aaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaa 330379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 159
Target Start/End: Original strand, 16701201 - 16701335
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaa---aacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtga 124  Q
    |||||||||||||||||||||| || ||||| |||||||   ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  16701201 tggagttggaaatagggagatatgactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgaattaaaaaagatatgaccattttcgtga 16701300  T
Q  125 gttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||||||||||| |||||||||    
T  16701301 gttggtcaaaatggtaggaccaaaaatgtaattaa 16701335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 40838813 - 40838653
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||| |||| || ||||| |||||||||||||||||||| ||| ||||||||| ||||||    
T  40838813 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtttatggacgattttgtttgattta 40838714  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||| || || |||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  40838713 aaagaggtatgaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaaac 40838653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 25535052 - 25534893
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagttta-aggatgattttgttcgattt 99  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||||  ||| |||||||||||||||    
T  25535052 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatataatttaggggacgattttgttcgattt 25534953  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || |||||||||| ||| ||||||||||||  ||||||||||||||||||||    
T  25534952 aaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaa 25534893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 34104798 - 34104644
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||||||||| ||| ||||| |||||||||| ||||| || ||||| ||||||||||||||||||||| || |||||||||| |||||    
T  34104798 actaaaaatgtcatttttgtgcgtttctggagctggaaatagg-agatatgactaaaactgcaaaaaacatatagtttaatgacgattttgttcaattta 34104700  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 156  Q
    |||||||||  |||||||||||||||||||||||||||||| || |||||||||||    
T  34104699 aaaaagatagaaccattttcgtgagttggtcaaaatggtagaacaaaaagtgtaat 34104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 51828701 - 51828542
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| |||||||||||||||    
T  51828701 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttacggacgattttgttcgattt 51828602  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||||| |||||| | ||||||||||||  ||||||||||||||||||||    
T  51828601 aaaagaggtaagaccaatttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaa 51828542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 40275479 - 40275636
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||| |||| || ||||| ||||||||||||||||||||  || ||||||||||||||||    
T  40275479 actaaaactgtcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtttagagacgattttgttcgattta 40275578  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  40275579 aaagaggtaggacca-tttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 40275636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 52375716 - 52375874
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||  ||| || ||||| |||||||||||||||||||| ||| |||||||||| |||||    
T  52375716 actaaaactgtcatttctgtgcgtttctggagttggaaataggggaatatgactaaaactgcaaaaaacatatagtttatggacgattttgttcaattta 52375815  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  52375816 aaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 52375874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 32730550 - 32730390
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| | |||||||||||||||||||| |||||||| |||||||||||||||||||| ||| |||||||||| |||||    
T  32730550 actaaaactgtcatttatgtgcgtttctagagttggaaatagggagatacgattaaaactgcaaaaaacatatagtttagggacgattttgttcaattta 32730451  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||| || || ||||| ||||  |||||||||||||||  ||||||||||||||||||||||    
T  32730450 aaagaggtaggaccaatttcaagagttggtcaaaatgcaaggaccaaaagtgtaattaaac 32730390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 49951931 - 49952089
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| ||||||||||||| || ||||| |||||||||||| |||||||| || ||||||||||||||||    
T  49951931 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatgtagtttaatgacgattttgttcgattta 49952030  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  49952031 aaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 49952089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 55389982 - 55390140
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||| ||||| ||||| | ||||||||||||||||||  || ||||||||| ||||||    
T  55389982 actaaaactgtcatttctgtgcgtttatggagttggaaatagggaggtaggactaaaactacaaaaaacatatagtttagtgacgattttgtttgattta 55390081  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || |||||||||||||| ||||| ||||||  ||||||||||||||||||||    
T  55390082 aaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaa 55390140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 159
Target Start/End: Complemental strand, 14654314 - 14654202
Alignment:
Q  47 ataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggacca 146  Q
    |||||| ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||    
T  14654314 ataggactaaaaatgcaaaaaacatatagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtagtatca 14654215  T
Q  147 aaagtgtaattaa 159  Q
    |||||||||||||    
T  14654214 aaagtgtaattaa 14654202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 22370758 - 22370598
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||| ||| |||||||||| ||| |||||||||| ||||| ||||||||| ||||||||||| ||| ||||||||| | |||    
T  22370758 actaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgtttggttt 22370659  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 160  Q
    ||||||| || |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  22370658 aaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 22370598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 16689497 - 16689359
Alignment:
Q  23 atttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgt 122  Q
    |||| |||||| |||||||||| ||||||| ||||| ||||||||||||||| |||| ||| ||||||||||||||||||| || || ||||| ||||||    
T  16689497 atttctggagtcggaaatagggtgataggactaaaactgcaaaaaacatatattttatggacgattttgttcgatttaaaagaggtaggaccaatttcgt 16689398  T
Q  123 gagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  16689397 gagttggtcaaaatgctaggaccaaaactgtaattaaac 16689359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 46013583 - 46013425
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    |||||||  ||||||| ||||| ||| |||||||| ||||||||||||| || ||||| ||||||||||||||| |||| ||| ||||||||||||||||    
T  46013583 actaaaaccgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatactttagggacgattttgttcgattta 46013484  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||||||||||||  |||| |||||||||||||||    
T  46013483 aaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 46013425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 49720532 - 49720374
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||| |||||| |||||||||| ||||| |||||||||| |||| |||| ||| ||||||||||||||||    
T  49720532 actaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaaaaaacgtatactttagggacgattttgttcgattta 49720433  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||||||||||||  |||| |||||||||||||||    
T  49720432 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 49720374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 52236977 - 52236819
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||| |||| || ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  52236977 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggggatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 52236878  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || |||||||||||||| ||| ||||||||  ||||| ||||||||||||||    
T  52236877 aaagaggtatgaccattttcgtgaattgttcaaaatgcgaggactaaaagtgtaattaa 52236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 52375488 - 52375330
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| | ||| ||| ||||||| ||||||||||||||| | ||||| |||||||||||||||||||| ||| |||||||||| |||||    
T  52375488 actaaaactgtcatttctatgcgtttctggagttagaaatagggagatagaactaaaactgcaaaaaacatatagtttagggacgattttgttcaattta 52375389  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || |||||||||||||| ||||| ||||||  ||||||||||||||||||||    
T  52375388 aaagaggtatgaccattttcgtgaattggttaaaatgtgaggaccaaaagtgtaattaa 52375330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 40275256 - 40275096
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa--catatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||| ||||| ||| ||||||| |||||| |||||||||| ||||| |||||||||  |||| |||||| |||  |||||||||||||    
T  40275256 actaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaacatagagtttagggacaattttgttcgatt 40275157  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| || || |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  40275156 taaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 40275096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 14654576 - 14654732
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||||| |||||||||| ||||| |||||||||||||  ||||| ||| ||||||||||||||||    
T  14654576 actaaaactgtcatttatgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaacata--gtttacggacgattttgttcgattta 14654673  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || ||   ||| |||||||||||||||||||||  ||||||||||||||||||||    
T  14654674 aaagaggtagagccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 14654732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 38535680 - 38535838
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| |||||| |||||||||    
T  38535680 actaaaactgtaatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttattcgattta 38535779  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| ||||  ||| | |||||| ||||||||||||||   ||||||||||| |||||||    
T  38535780 aaagagatcggactaatttcgtaagttggtcaaaatgcacggaccaaaagtataattaa 38535838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 44676633 - 44676475
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| | ||||||||||||||||||||||| ||||  |||||||||||||||||||| ||| | ||||||||||||||    
T  44676633 actaaaactgtcatttctgtgcgtttcttgagttggaaatagggagataggactaaagctgcaaaaaacatatagtttagggacggttttgttcgattta 44676534  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || || || |||| |||||| |||||||||  ||||||||||||||||||||    
T  44676533 aaagaggtatgatcaatttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaa 44676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 30513883 - 30513725
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgca-aaaaacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| || |||| |||||| ||||||| || ||||| |||| |||||||||||||||||| | |||||| ||||||||    
T  30513883 actaaaactgtcatttctgtgcgtttctgaagttcgaaatatggagatatgactaaaactgcagaaaaacatatagtttaag-acgattttattcgattt 30513785  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| ||||||||||||||||| |||||||||  |||||||||| |||||||||    
T  30513784 aaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaa 30513725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 2044432 - 2044274
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||| ||| | |||||||||||||||||||| || ||||| | ||||||||||||| |||| ||| ||||||||||||||||    
T  2044432 actaaaactgttatttatgtgcgtttcttgagttggaaatagggagatatgactaaaactccaaaaaacatataatttatggacgattttgttcgattta 2044333  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || |||||||||| ||||||||||||||||  || |||||||||| ||||||    
T  2044332 aaagaggtatgaccattttcatgagttggtcaaaatgcgagaaccaaaagtgaaattaa 2044274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 43678669 - 43678827
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| | |||||||||||||| ||||| || | ||| |||||||||||||||||||| ||| ||||||||||||||||    
T  43678669 actaaaactgtcatttatgtgcgtttctagagttggaaataggaagatatgactgaaactgcaaaaaacatatagtttatggacgattttgttcgattta 43678768  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || |  |||||  ||||||||||| ||||||||  ||||||||||||||||||||    
T  43678769 aaagaggttggaccaagttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 43678827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 51473016 - 51472858
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||||||| |||| |||  |||||||| ||||||    
T  51473016 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatactttagggacaattttgtttgattta 51472917  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||  | |||| ||||||||||||||||  |||||||||||| |||||||    
T  51472916 aaagaggtaggaaaaatttcatgagttggtcaaaatgcaaggaccaaaagtataattaa 51472858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 43222551 - 43222393
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaa-tagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||||||| | ||| |||||||| ||| ||||| | ||||||||||| |||||||||||||||||||| ||| |||||||||||||||    
T  43222551 actaaaactgtcatttttgtacgtttctggagttgaaaaataggggg-taggattaaaaatgcaaaaaacatatagtttagggacgattttgttcgattt 43222453  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| ||| |  || |||||||||||||||||||||||  | ||||||||  ||||||||    
T  43222452 aaaagagacataactattttcgtgagttggtcaaaatgtgatgaccaaaaacgtaattaa 43222393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 34105033 - 34105190
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa--aacatatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||| ||||| ||| || ||||||||||| |||||| ||| ||||| |||||||  ||||||||||||| ||| ||||||||||||||    
T  34105033 actaaaactgtcatttctgtgcgtttctgaagttggaaataaggagatgggactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 34105132  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 156  Q
    ||||| ||  | |||||  ||||| ||||||||||||||  |||||||||||||||||    
T  34105133 taaaagagggaggaccaacttcgtaagttggtcaaaatgcaaggaccaaaagtgtaat 34105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 159
Target Start/End: Original strand, 36701508 - 36701639
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagt 126  Q
    |||||||| ||||||| || || || ||||| |||||||||||| |||||||| ||||||||||||||||||| ||| ||| | |||||||||||||||     
T  36701508 tggagttgaaaatagg-aggtatgactaaaactgcaaaaaacatgatagtttagggatgattttgttcgatttgaaagagacatgaccattttcgtgagc 36701606  T
Q  127 tggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||  ||||||||||||||||||||    
T  36701607 tggtcaaaatgcgaggaccaaaagtgtaattaa 36701639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 39010235 - 39010078
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| | |||||| ||||| ||| |||||||| ||||||||||||  || ||||| ||||||||||||| |||||||| |  |||||||||||||||    
T  39010235 actaaaactatcatttatgtgc-tttatggagttgaaaatagggagatgtgactaaaactgcaaaaaacatacagtttaagaacaattttgttcgattta 39010137  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || || || ||| |||||||||||||||||  |||||||||| |||||||||    
T  39010136 aaagaggtatgagcaattttgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 39010078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 159
Target Start/End: Original strand, 41998643 - 41998771
Alignment:
Q  30 gagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttg 128  Q
    |||||| |||||||||| ||||| ||||| ||||||||| ||||||||| | ||| ||||||||||||||||||| || || ||||| |||||| |||||    
T  41998643 gagttgaaaatagggag-taggactaaaactgcaaaaaaacatatagtt-agggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttg 41998740  T
Q  129 gtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||  ||||||||||||||||||||    
T  41998741 gtcaaaatgcaaggaccaaaagtgtaattaa 41998771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 49407955 - 49407799
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaa 101  Q
    ||||||||||||||| | ||| |||||||||||| ||||||| || || || ||||| || | |||||||| |||||| ||| | |||||||| |||| |    
T  49407955 ctaaaattgtcatttctctgcgtttttggagttgaaaatagg-aggtatgactaaaactgtacaaaacataaagtttagggacggttttgttctatttga 49407857  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || ||  | ||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  49407856 aagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaa 49407799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 43222774 - 43222933
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaa-tagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||||||||| ||| |||||||| ||| ||||| | | ||| ||||| ||||||||| |||| |||||| ||| ||||||||||||||    
T  43222774 actaaaactgtcatttttgtgcgtttctggagttgaaaaataggggg-tgggactaaaactgcaaaaaaacataaagtttagggacgattttgttcgatt 43222872  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| ||  | ||||||||||||| | | |||||||||  |||||||||||||| |||||    
T  43222873 taaaagaggcatgaccattttcgtgcgcttgtcaaaatgcgaggaccaaaagtgtgattaa 43222933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 39010468 - 39010554
Alignment:
Q  63 aaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaa 149  Q
    ||||||||||  | ||||||| ||||||||||||||||||||||||| || |||||||||||| |||||||||||| |||| |||||    
T  39010468 aaaaaacatacggattaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagctggtcaaaatggcaggatcaaaa 39010554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 55192277 - 55192121
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaa 101  Q
    |||||| |||||||| | ||| ||| |||||||| ||||||| || ||||| ||||| | |||||||||||||||||| ||| | ||||||| ||||| |    
T  55192277 ctaaaactgtcatttctctgcgtttctggagttgaaaatagg-aggtaggactaaaactacaaaaaacatatagtttatggacggttttgtttgatttga 55192179  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || ||    ||||||||||||||| |||||||||||   |||| ||||||||||||||    
T  55192178 aagaggcgagaccattttcgtgagctggtcaaaatgcggggactaaaagtgtaattaa 55192121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 159
Target Start/End: Original strand, 50900940 - 50901070
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagtt 127  Q
    |||||||| ||||||| || |||||  |||| |||||||||||||||||||| ||| | |||||||||||||  || ||  | | ||||||| ||||| |    
T  50900940 tggagttgaaaatagg-aggtaggacaaaaactgcaaaaaacatatagtttagggacggttttgttcgatttgtaagaggcagggccatttttgtgagct 50901038  T
Q  128 ggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||  ||||||||||||||||||||    
T  50901039 ggtcaaaatgcgaggaccaaaagtgtaattaa 50901070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 27199801 - 27199703
Alignment:
Q  63 aaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||||||||||  || | ||||||||||||| ||| ||  | ||||||||||||||| |||||||||||  |||||||||| |||||||||||    
T  27199801 aaaaaacatatagtttagtgacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaatgtaattaaac 27199703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 36701206 - 36701109
Alignment:
Q  63 aaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||| ||| ||||||||||||||| ||| ||  | || ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  36701206 aaaaaacatgatagtttatggacgattttgttcgatttgaaagaggcatgatcattttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaa 36701109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 27200085 - 27200234
Alignment:
Q  9 tgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaaga 107  Q
    |||||||| | ||| ||| |||||||| ||||||| || || || ||||| |||||||||||| |||||||| ||| | | ||||||||||| ||| ||     
T  27200085 tgtcatttctctgcgtttctggagttgaaaatagg-aggtatgactaaaactgcaaaaaacatgatagttta-ggacggtattgttcgatttgaaagagg 27200182  T
Q  108 tacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     |  |||||||||||||| |||||||||||  ||||||||||||||||||||    
T  27200183 cagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 27200234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 33412609 - 33412697
Alignment:
Q  71 tatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| ||| ||||||||||||||  ||| ||| |  |||||||||||||| || ||||||||  ||||||||||||||||||||    
T  33412609 tatagtttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaattaa 33412697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 37075785 - 37075689
Alignment:
Q  63 aaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||| ||| |  |||||| ||||| ||| ||  | |||||||||||||||||||||||||||    ||||||||||||||||||    
T  37075785 aaaaaacatatagtttagggacgggtttgtttgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaa 37075689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 49408252 - 49408324
Alignment:
Q  87 ttttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||| ||| ||| || |||||||||||||| |||||||||||  || |||||||||||||||||    
T  49408252 ttttgttcgatttgaaagagacacaaccattttcgtgagatggtcaaaatgcgagtaccaaaagtgtaattaa 49408324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 8874133 - 8874231
Alignment:
Q  63 aaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||||||||||||||| ||| | ||||||||||||||||| |   | ||||||||||||||| ||||||||| |   |||  ||||||||||||||||    
T  8874133 aaaaaacatatagtttagggaaggttttgttcgatttaaaagaagcaggaccattttcgtgagctggtcaaaacgcggggatgaaaagtgtaattaaac 8874231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 159
Target Start/End: Original strand, 12141125 - 12141234
Alignment:
Q  51 gattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaa 149  Q
    |||||||| |||||||||||| ||||||||  |||| ||||||||||||| ||| || || |||||||| |||||  || | ||||||  |||| |||||    
T  12141125 gattaaaactgcaaaaaacatgatagtttagagatggttttgttcgatttgaaagaggtaggaccatttacgtgatctgataaaaatgcgaggaacaaaa 12141224  T
Q  150 gtgtaattaa 159  Q
    ||||||||||    
T  12141225 gtgtaattaa 12141234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 2323512 - 2323380
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagt 126  Q
    |||||||| ||||||| || ||||| |||||||||||||||||| ||||||| |||||| ||||||||||||| ||| ||  |  |  ||||| ||||      
T  2323512 tggagttgaaaatagg-aggtaggactaaaattgcaaaaaacatgatagttt-aggatggttttgttcgatttgaaagaggcagtataatttttgtgaac 2323415  T
Q  127 tggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||||  ||||| |||| |||||||||||    
T  2323414 tggtcaaaatgcgaggacaaaaaatgtaattaaac 2323380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 37076112 - 37076217
Alignment:
Q  54 taaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtg 152  Q
    ||||| || ||||||||| |||||||| ||| ||||||||||||||| ||| ||    ||||||||||||||| || ||||||||  |||||||||| ||    
T  37076112 taaaaatgtaaaaaacatgatagttta-ggacgattttgttcgatttgaaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaatg 37076210  T
Q  153 taattaa 159  Q
    |||||||    
T  37076211 taattaa 37076217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 37847206 - 37847328
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattta 100  Q
    ||||||||||||||| | ||||||| || ||||| ||||| |||||||||| ||||| ||| |||||||| |||||||| ||| |  ||||||||||||     
T  37847206 ctaaaattgtcatttctctgcatttctgaagttgaaaata-ggagataggactaaaactgc-aaaaacatgatagtttagggacggctttgttcgatttg 37847303  T
Q  101 aaaaagatacgaccattttcgtgag 125  Q
    ||| ||  | |||||||||| ||||    
T  37847304 aaagaggcaagaccattttcctgag 37847328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 8873765 - 8873693
Alignment:
Q  87 ttttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 160  Q
    ||||||||||||||||| ||| | |||||||||||| |  || ||||||||  |||||||||| ||||||||||    
T  8873765 ttttgttcgatttaaaagagacatgaccattttcgtaaactgatcaaaatgcgaggaccaaaa-tgtaattaaa 8873693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 50900631 - 50900535
Alignment:
Q  63 aaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||| ||| | ||||||||||||| ||| || || ||||||||||||||| || |||||||   | |||||||||| |||||||    
T  50900631 aaaaaacatgatagttta-ggacggttttgttcgatttgaaagagttaggaccattttcgtgagctgatcaaaatttgaagaccaaaagtttaattaa 50900535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 34789543 - 34789385
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    |||||||||||||||| ||||| ||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  34789543 actaaaattgtcatttatgtgcgtttctggagtttgaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 34789444  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34789443 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 34789385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 12593185 - 12593027
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12593185 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 12593086  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12593085 aaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgtaattaa 12593027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 28465478 - 28465624
Alignment:
Q  13 atttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacga 112  Q
    |||| ||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  28465478 atttatgtgcgtttatggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagatagga 28465577  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28465578 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 28465624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 56077709 - 56077867
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||||||||| ||| | ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  56077709 actaaaactgtcatttttgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 56077808  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  56077809 aaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaa 56077867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 14440213 - 14440371
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| | |||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||    
T  14440213 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacatatagtttaaggatgattttgttcgattta 14440312  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  14440313 aaaaagataggaccattttcgtaagttggtcaaaatggtaggaccaaaagtataattaa 14440371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 21034397 - 21034238
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||||||| || ||||| || |||||| ||||||||||||||| |||||||||||||||    
T  21034397 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactgtaaaaaaacatatagtttaaggacgattttgttcgattt 21034298  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21034297 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 21034238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 54440954 - 54441112
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||   |||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  54440954 actaaaactgtcattgacgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 54441053  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||    
T  54441054 aaaaagataggaccattttcgtgagctgatcaaaatggtaggaccaaaagtgtaattaa 54441112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 26974445 - 26974286
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| || |||||| ||||||||||||||| |||||||||||||||    
T  26974445 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaacatatagtttaaggacgattttgttcgattt 26974346  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  26974345 aaaaaagatatgaccattttcgtgagtttgttaaaatggtaggaccaaaagtgtaattaa 26974286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 41114320 - 41114158
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa--catatagtttaaggatgattttgttcgatt 98  Q
    |||||||||||||||| ||||| ||| | |||||||||||||||||||| || ||||| |||||||||  ||||||||||||||| | ||||||||||||    
T  41114320 actaaaattgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgtttttgttcgatt 41114221  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  41114220 taaaaaagataggacccttttcgtgagttggtcaaaatggtaggaccaaaagtgtcattaaac 41114158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 46736816 - 46736658
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||||||    
T  46736816 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaatctgcaaaaaacatatagtttaaggacaattttgttcgattta 46736717  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| ||| |||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  46736716 aaaaaaataagaccattttcgtgagttggtcaaaatagtagaaccaaaagtataattaa 46736658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 45838932 - 45839094
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa---aacatatagtttaaggatgattttgttcgat 97  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||| |||||||| ||||| |||||||   ||||||||||||||||| |||||||||||||    
T  45838932 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcgat 45839031  T
Q  98 ttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  45839032 ttaaaaaagataggacca-tttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaaac 45839094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 33777772 - 33777633
Alignment:
Q  22 catttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcg 121  Q
    ||||| |||||||| |||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| || ||||||||    
T  33777772 catttatggagttgaaaatggagagataggattaaaattgcaaaaaacatatagtttaaggacgattttgttcgattttaaaaaaatatgatcattttcg 33777673  T
Q  122 tgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  33777672 tgagttggtcaaaatggtaggaacaaaagtgtaattaaac 33777633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 28166155 - 28166005
Alignment:
Q  11 tcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatac 110  Q
    |||||| ||||| |||||| ||||| |||||||||||||||| ||||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||     
T  28166155 tcatttctgtgcgtttttgtagttgaaaatagggagataggactaaaactgcaaaaaaaatatagtttaaggacaattttgttcgatttaaaaaagatag 28166056  T
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||||||||||||||||||| |||||||||||| | |||||||||    
T  28166055 gaccattttcgtgagttggtcaaaatagtaggaccaaaaatttaattaaac 28166005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 14439989 - 14439829
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| |||||||||  |||||    
T  14439989 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgtttaattta 14439890  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||| || ||||| |||||||||||||||||||||  |||||||||| |||||||||||    
T  14439889 aaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaaac 14439829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 34789767 - 34789926
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||  ||||||||||||||    
T  34789767 actaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacaattttgttcgattt 34789866  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  34789867 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 34789926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 36168716 - 36168874
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| ||| |||| ||||||||| |||||||| |||||||||||||||| |||||  |||||||||||||| |||||| || ||||||||| |||||    
T  36168716 actaaaactgtgatttatgtgcatttatggagttgaaaatagggagataggactaaaaccgcaaaaaacatataatttaagaataattttgttctattta 36168815  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| ||| || |||||||||||||||||||||||||||||||||| |||||||||||    
T  36168816 aaaaaaataggatcattttcgtgagttggtcaaaatggtaggaccaagagtgtaattaa 36168874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 28465242 - 28465084
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| ||||||||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  28465242 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 28465143  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || || || |||||| ||||||||||||||| ||||| ||||||||||||||    
T  28465142 aaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgtaattaa 28465084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 46737040 - 46737198
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||| ||||| ||||| || ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  46737040 actaaaactgtcatttctgtgcgtttctggagttggagataggaagatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 46737139  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  46737140 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 46737198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 6616834 - 6616673
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||| ||| ||||| ||| |  |||||||| ||||||||||||||| |||||||||||||||    
T  6616834 actaaaactgtcatttatgtgcgtttctggagttggaaatagagaggtaggactaacacagcaaaaaaacatatagtttaaggacgattttgttcgattt 6616735  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||| ||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  6616734 aaaaaaaataagaccattttcgtgagttgatcaaaatgatagaaccaaaagtgtaattaaac 6616673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 54440730 - 54440574
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||||||| || ||||| |||||||||||||||| ||||| |||||||||||||  ||||| ||| ||||||||||||||||    
T  54440730 actaaaactgtcatttctgtgcatttctgaagttgaaaatagggagataggactaaaactgcaaaaaacata--gtttagggacgattttgttcgattta 54440633  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  54440632 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 54440574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 55677342 - 55677501
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| |||||||| |||| |||||||||||||  || |||||||||||||||    
T  55677342 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaattgtaaaaaaacatatagtttagagacgattttgttcgattt 55677441  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||||| ||||||||||||||||||||   ||||||||||||||||||||    
T  55677442 aaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaa 55677501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 12593408 - 12593566
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||  ||||| ||| |||||||| |||||||||||||||| ||||| ||||||||| ||||||||||  || ||||||||||||||||    
T  12593408 actaaaactgtcattcctgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaatatatagtttacagacgattttgttcgattta 12593507  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  12593508 aaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 12593566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 19529031 - 19528872
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| |||  |||||||||||||||||||||||| ||||| ||||||||| ||||||||||| ||| |||||| ||||||||    
T  19529031 actaaaactgtcatttctgtgcgtttccggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggacgattttattcgattt 19528932  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||||| |||||||| ||||||||||||  ||||||||||||||||||||    
T  19528931 aaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaa 19528872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 21034621 - 21034780
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaaca-tatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||||||||  ||| ||||||||||||||||||||||| | ||||| ||||||||| | ||||||| | ||| |||||||||||||||    
T  21034621 actaaaactgtcatttttgtgtgtttctggagttggaaatagggagatagaactaaaactgcaaaaaaaaatatagttcagggacgattttgttcgattt 21034720  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| ||||| ||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  21034721 aaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaa 21034780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 34807278 - 34807119
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| |||||||||||||| |||||||||| ||||| ||||||||| |||||| |||| ||| |||||||||||||||    
T  34807278 actaaaactgtcatttatgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaaacatatactttagggacgattttgttcgattt 34807179  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  34807178 aaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 34807119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 33689981 - 33689832
Alignment:
Q  9 tgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagat 108  Q
    |||||||| ||||| ||| |||||||| ||||||||||||| || ||||| |||||||| ||||||||||||||| ||||||||||||||||||| || |    
T  33689981 tgtcatttatgtgcgtttctggagttgtaaatagggagatatgactaaaactgcaaaaa-catatagtttaaggacgattttgttcgatttaaaagaggt 33689883  T
Q  109 acgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    | ||||| ||| |||||||||||||||||  ||||||||||||||||||||    
T  33689882 aggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 33689832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16214880 - 16215041
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| | |||||| ||||  ||| |||||||| ||||||| |||||| ||||||| ||||||||| |||||||||||||| |||||| ||| |||||    
T  16214880 actaaaactatcatttatgtgtgtttctggagttgaaaataggaagatagaattaaaactgcaaaaaatatatagtttaaggacgattttattcaattta 16214979  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaaca 162  Q
    ||||||||| || ||||||||| ||||| |||||||| ||||||||||||| ||||||||||    
T  16214980 aaaaagatatgatcattttcgtaagttgatcaaaatgataggaccaaaagtataattaaaca 16215041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 34807524 - 34807684
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| | ||| ||| ||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| |||||||||||| |||    
T  34807524 actaaaactgtcatttctatgcgtttatggagttggaaatagggagataggactaaaactgccaaaaacatatagtttaaggacgattttgttcgaatta 34807623  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||  |  |||||||||||||| |||||||  || |||||||| | |||||||||    
T  34807624 aaaaagatagaataattttcgtgagttgatcaaaataataagaccaaaaatataattaaac 34807684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 45838698 - 45838554
Alignment:
Q  11 tcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatac 110  Q
    |||||| ||||| |||||| ||| |||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||||| || ||     
T  45838698 tcatttctgtgcgtttttgaagtaggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtag 45838599  T
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 155  Q
    ||||| || |||||||||||||||||   ||||||||||||||||    
T  45838598 gaccaattacgtgagttggtcaaaatacaaggaccaaaagtgtaa 45838554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 24851850 - 24852009
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| | |||||| ||||| ||| |||||||||||||||  |||||||| ||||| ||||||| ||||||||||||| ||| |||||||||||||||    
T  24851850 actaaaactttcatttctgtgcgtttctggagttggaaatagaaagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 24851949  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || || || |||||||||||||||||||||  |||||||||||| |||||||    
T  24851950 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtataattaa 24852009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 41608536 - 41608375
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa---catatagtttaaggatgattttgttcgat 97  Q
    ||||||| |||||||| ||||| |||||| ||||||||||| |||||||||| ||||| |||||||||   ||||||||||  ||| |||||||||||||    
T  41608536 actaaaactgtcatttctgtgcgtttttgaagttggaaatatggagataggactaaaactgcaaaaaaaaacatatagttt--ggacgattttgttcgat 41608439  T
Q  98 ttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||| || || ||||| |||| ||||||| ||||||||  ||||||||||||||||||||||    
T  41608438 ttaaaagaggtatgaccaatttcatgagttgatcaaaatgcaaggaccaaaagtgtaattaaac 41608375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 19529078 - 19529237
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| |||||  ||||||||||| |||||||| | ||||| ||||||| |||||||||||||| || |||||||||| ||||    
T  19529078 actaaaactgtcatttctgtgcgttttttaagttggaaatatggagatagaactaaaactgcaaaaaaacatatagtttaaagacgattttgttcaattt 19529177  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| |||||  | ||||||  | |||||||||||||||||||| |||||||||||||||    
T  19529178 aaaagagatagaatcatttttataagttggtcaaaatggtaggagcaaaagtgtaattaa 19529237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 35643728 - 35643556
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa------------catatagtttaaggatgatt 88  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||||||||||| ||||| |||||||||            ||||||||||||||| ||||    
T  35643728 actaaaactgtcatttctgtgcgtttatggagttgtaaatagggagataggactaaaactgcaaaaaaaaaaaaaaaaaacatatagtttaaggacgatt 35643629  T
Q  89 ttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    || ||| |||| ||||||||| |||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  35643628 ttattcaattttaaaaagataggaccattttcgtgagttggtcaaaatggtaagaccaatagtgtgattaaac 35643556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 229544 - 229704
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattt 99  Q
    ||||||||||||| || ||||| ||| |||||||| ||||| |||| ||||||||||| |||||||| ||| |||||||||||| ||||||||| |||||    
T  229544 actaaaattgtcacttctgtgcgtttctggagttgaaaataaggaggtaggattaaaactgcaaaaa-catgatagtttaaggacgattttgtttgattt 229642  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
     ||| ||  | ||||||||||||||| |||||||||||  | ||||||||||||||||||||    
T  229643 gaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaaac 229704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 33778018 - 33778155
Alignment:
Q  22 catttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcg 121  Q
    ||||| ||||||||||||||||||||||| | ||||| ||||||||||||||| |||| | | ||||||||| ||||||||| || ||  | ||||||||    
T  33778018 catttatggagttggaaatagggagatagaactaaaactgcaaaaaacatataatttaggaacgattttgtttgatttaaaagaggtagaatcattttcg 33778117  T
Q  122 tgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| ||||||||||||| || ||||||||||||||    
T  33778118 tgagttagtcaaaatggtagaacgaaaagtgtaattaa 33778155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 36168485 - 36168330
Alignment:
Q  9 tgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa---catatagtttaaggatgattttgttcgatttaaaaaa 105  Q
    |||||||| | ||| ||| ||||||| |||||||||||||| || ||||| |||||||||   |||||| |||||||| ||||||||||||||||||| |    
T  36168485 tgtcatttatatgcgtttctggagttagaaatagggagataagactaaaactgcaaaaaaaaacatataatttaaggacgattttgttcgatttaaaaga 36168386  T
Q  106 gatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    | || ||||| ||||||| |||||||||||||  |||| |||||||||||||||||    
T  36168385 ggtaagaccaatttcgtgggttggtcaaaatgcaaggagcaaaagtgtaattaaac 36168330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 24851407 - 24851319
Alignment:
Q  71 tatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||| |||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||    
T  24851407 tatagtttaaggacgattttgttcaatttaaaaaagatagcaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 24851319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 6617068 - 6617207
Alignment:
Q  22 catttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcg 121  Q
    ||||| |||||||||| |||||||||||||| ||||| ||||||||| |||||||||| ||| |||||| |||||||||||| || || ||||| |||||    
T  6617068 catttctggagttggagatagggagataggactaaaactgcaaaaaaaatatagtttagggacgattttattcgatttaaaagaggtaggaccaatttcg 6617167  T
Q  122 tgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||| |||||||||  || | ||||| |||||||||||    
T  6617168 tgagttagtcaaaatgcaagtagcaaaaatgtaattaaac 6617207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 35193467 - 35193322
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaa 101  Q
    |||||| |||||||| | ||| ||| || ||||| ||||||| |||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||| |    
T  35193467 ctaaaactgtcatttctctgcgtttctgaagttgaaaatagg-agataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttga 35193369  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaa 148  Q
    || || || ||||||||||||||| || ||||||||  |||||||||    
T  35193368 aagaggtaggaccattttcgtgagctgatcaaaatgcgaggaccaaa 35193322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 1397683 - 1397598
Alignment:
Q  74 agtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||||||| ||| |||||||||||||||    
T  1397683 agtttaaggacgattttgttcgatttaaaaaagataggaccatttttatgagttggtcaaaatggttggatcaaaagtgtaattaa 1397598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 41608870 - 41608958
Alignment:
Q  71 tatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||| | ||||||||| ||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41608870 tatagtttaagaacgattttgttggatttaaaagaggtaggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 41608958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 17504397 - 17504480
Alignment:
Q  54 taaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatg 137  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||| || ||||||||    
T  17504397 taaaattgcaaaaaacatatagtttaaggacggttttgttcgatttaaaagagataggaccattttcgtgagctgttcaaaatg 17504480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 229322 - 229162
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaata-gggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatt 98  Q
    ||||||| ||||| |||||||| ||| |||||||| ||||| ||||| ||| | ||||| |||||||| ||| |||||||||||| |||||||||| |||    
T  229322 actaaaactgtcacttttgtgcgtttatggagttgaaaataagggag-tagaactaaaactgcaaaaa-catgatagtttaaggacgattttgttcaatt 229225  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    | ||| ||  | ||||||||||| ||| ||||||||||   ||||||||||||||||||||||    
T  229224 tgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaaac 229162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 26974662 - 26974788
Alignment:
Q  34 tggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtca 132  Q
    |||||||||| ||||| || ||||| ||||||| ||||||||||||| |||  |||||||||||||||||| || || ||||| |||||||| ||  |||    
T  26974662 tggaaataggaagatatgactaaaactgcaaaaaaacatatagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgaattattca 26974761  T
Q  133 aaatggtaggaccaaaagtgtaattaa 159  Q
    |||||  |||||||||| |||||||||    
T  26974762 aaatgcaaggaccaaaaatgtaattaa 26974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 159
Target Start/End: Complemental strand, 23986635 - 23986523
Alignment:
Q  48 taggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggacca 146  Q
    ||||| ||||| |||||||||||| |||||||| |||   ||||||||||||| ||| ||| | ||||||||||||||| |||||||||||  |||||||    
T  23986635 taggactaaaactgcaaaaaacatgatagtttagggacagttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgtgaggacca 23986536  T
Q  147 aaagtgtaattaa 159  Q
    |||||| ||||||    
T  23986535 aaagtgaaattaa 23986523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 24335920 - 24335764
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaa 101  Q
    ||||| |||||||| ||||| |||||||||||| |||||||| | ||||| ||||| | |||||||||| |||||| |   | | ||||||||||||| |    
T  24335920 taaaactgtcatttatgtgcgtttttggagttgaaaatagggtg-taggactaaaactccaaaaaacatgatagttcagatacggttttgttcgatttga 24335822  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || ||  | ||||||||||||||| |||||||||||  |||| | |||||||||||||    
T  24335821 aagaggcatgaccattttcgtgagctggtcaaaatgcaaggatcgaaagtgtaattaa 24335764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 40160225 - 40160097
Alignment:
Q  30 gagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttgg 129  Q
    |||||| ||||||| || ||||| ||||| |||||||||||||||||||| ||| | ||||||||||||||||| ||  | ||| ||||||||||| |||    
T  40160225 gagttgaaaatagg-aggtaggactaaaactgcaaaaaacatatagtttagggacggttttgttcgatttaaaagaggcatgactattttcgtgagctgg 40160127  T
Q  130 tcaaaatggtaggaccaaaagtgtaattaa 159  Q
    | ||||||   ||| ||||| |||||||||    
T  40160126 ttaaaatgcggggatcaaaaatgtaattaa 40160097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24851626 - 24851559
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa 68  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||| || ||||| |||||||||    
T  24851626 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataagactaaaactgcaaaaaa 24851559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 40160503 - 40160635
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagt 126  Q
    |||||||| ||||||| || || || ||||| |||||||||||| |||||||| ||| | |||||||| |||| ||| ||  | ||| ||||||||||||    
T  40160503 tggagttgaaaatagg-aggtaagactaaaactgcaaaaaacatgatagttta-ggacggttttgttcaatttgaaagaggcatgactattttcgtgagt 40160600  T
Q  127 tggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||||  |||||||||| |||||||||||    
T  40160601 tggtcaaaatgcaaggaccaaaaatgtaattaaac 40160635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 18965301 - 18965143
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| | ||| ||| | |||||| ||||| |||| ||| | ||||| |||||||| ||| |||||||||||| |||||||||||||||    
T  18965301 actaaaactgtcatttatatgcgtttctagagttgaaaataaggaggtagaactaaaactgcaaaaa-catgatagtttaaggacgattttgttcgattt 18965203  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     ||| ||  | |||| |||||||||||  || ||||||  |||| ||||| |||||||||    
T  18965202 gaaagaggcaagaccgttttcgtgagtaagttaaaatgtgaggatcaaaaatgtaattaa 18965143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 17504133 - 17503977
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattta 100  Q
    |||||| |||||||| | | | ||| |||||||| ||||||| || ||||| ||||| |||||||||||| |||||||| ||| | || ||||| ||||     
T  17504133 ctaaaactgtcatttctctacgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacggttatgttccatttg 17504036  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| ||  | ||||||||||||||| |||||||||||  |||||||| ||| |||||||    
T  17504035 aaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaa 17503977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 44219448 - 44219378
Alignment:
Q  89 ttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| |||||||||||| | ||||| |||||||||||||| |||||   ||||||||||||||||||||    
T  44219448 ttgttcaatttaaaaaagagaggaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaa 44219378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 30597958 - 30598059
Alignment:
Q  55 aaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgta 154  Q
    |||| ||||| ||| ||||| |||| ||| ||||||||||||||||||| ||| |  |||| || ||||||||||||||||    |||||||||||||||    
T  30597958 aaaagtgcaacaaaaatataatttagggacgattttgttcgatttaaaagagacagaaccaattccgtgagttggtcaaaacacgaggaccaaaagtgta 30598057  T
Q  155 at 156  Q
    ||    
T  30598058 at 30598059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 35644042 - 35644105
Alignment:
Q  96 atttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| || || ||||  |||||||||||||||||||||  ||||||||||||||||||||    
T  35644042 atttaaaagaggtatgacctatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 35644105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 51309951 - 51310048
Alignment:
Q  63 aaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||| |||   ||||||||||||| ||| ||  | ||||||||||||||| |||| ||||||  ||||||||||||| ||||||    
T  51309951 aaaaaacatgatagtttagggactgttttgttcgatttgaaagaggcatgaccattttcgtgagctggtaaaaatgcgaggaccaaaagtgcaattaa 51310048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 24336234 - 24336306
Alignment:
Q  87 ttttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||| ||| ||  | ||||||||||||||| | |||||||||  |||| |||||||||||||||    
T  24336234 ttttgttcgatttgaaagaggcaggaccattttcgtgagcttgtcaaaatgcgaggatcaaaagtgtaattaa 24336306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 35643970 - 35644014
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaaaacata 72  Q
    |||||||||||||||||||||| || ||||| |||||||||||||    
T  35643970 tggagttggaaatagggagataagactaaaactgcaaaaaacata 35644014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 10795780 - 10795854
Alignment:
Q  85 gattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||| ||| ||| | ||||| ||||||||| || ||||||||   ||| |||||||||||||||    
T  10795780 gattttgttcgatttgaaagagagaggaccaatttcgtgagctgttcaaaatgcggggatcaaaagtgtaattaa 10795854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 35193748 - 35193845
Alignment:
Q  62 caaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| |||||||| ||| | ||||||| ||||| ||| ||  | ||||||||||||||| |  ||||||||  ||||||||||||||||||||    
T  35193748 caaaaaacatgatagttta-ggacggttttgttagatttgaaagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaa 35193845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 12930879 - 12930807
Alignment:
Q  87 ttttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||| ||||||| |   ||| |||||||||||||| ||||||   |||||||||||| ||||||    
T  12930879 ttttgttcgatttgaaaaagacaatgccaatttcgtgagttggttaaaatgtgcggaccaaaagtgcaattaa 12930807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 5e-65; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 18428146 - 18428307
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  18428146 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggagtaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 18428245  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18428246 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 18428307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 18049750 - 18049595
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgatttaa 101  Q
    ||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  18049750 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgatttaa 18049651  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 157  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  18049650 aaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 18049595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 15256213 - 15256374
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa---aacatatagtttaaggatgattttgttcgat 97  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||| || || || |||||||   ||||||||||||||||| |||||||||||||    
T  15256213 actaaaattgtcatttctgtgcgtttctggagttggaaatagggagatatgactagaactgcaaaaaaaaacatatagtttaaggacgattttgttcgat 15256312  T
Q  98 ttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15256313 ttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaa 15256374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 34799241 - 34799082
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| || ||||||||||||    
T  34799241 actaaaattgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgactttgttcgattt 34799142  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  34799141 aaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaagtgtaattaa 34799082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 16578481 - 16578639
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| | | ||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||     
T  16578481 actaaaactgtcatttctgtgcgtttctagtgttggaaatagggagataggactaaaactgcaaaaaacatatagtttaatgatgattttgttcgatttg 16578580  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16578581 aaaaagatataaccattttcgtgagttcgtcaaaatggtaggaccaaaagtgtaattaa 16578639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 41260403 - 41260274
Alignment:
Q  30 gagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttgg 129  Q
    |||||||||||||||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  41260403 gagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttgg 41260304  T
Q  130 tcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||||||||||||||||    
T  41260303 tcaaaatggtaggaccaaaagtgtaattaa 41260274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 28254587 - 28254428
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| | ||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||| ||||    
T  28254587 actaaaaatgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcaattt 28254488  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28254487 aaaatagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaa 28254428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 599883 - 600041
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| | ||| ||| |||| |||||||||| |||||| || ||||| |||||||||||||||||||||||| |||||||||| |||||    
T  599883 actaaaactgtcatttctatgcgtttctggaattggaaatagagagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttccattta 599982  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  599983 aaaaagatatgaccattttcgttagttggtcaaaatggtaggaccaaaagtgtaattaa 600041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 9797111 - 9797270
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||| |||||| | ||||| ||||||| ||||||||||||||||| |||||| || |||||    
T  9797111 actaaaactgtcatttctgtgcgtttatggagttggaaataggtagatagaactaaaactgcaaaaaaacatatagtttaaggacgattttatttgattt 9797210  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9797211 aaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9797270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 5730978 - 5730820
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||| | ||| |||||||  |||||||||| ||||| |||||  ||||||||||||||||||||||| ||||||||| ||||||    
T  5730978 actaaaactgtcatttctgtacgtttctggagttaaaaatagggaggtaggactaaaacagcaaaaaacatatagtttaaggacgattttgtttgattta 5730879  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5730878 aaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 5730820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 9796887 - 9796729
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  9796887 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaacatatagtttatggatgattttgttcgattta 9796788  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| ||| |||||||||||||||||  ||||||||||||||||||||    
T  9796787 aaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9796729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 42035933 - 42035775
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||| | |||||||||| ||| ||||||||||||||||    
T  42035933 actaaaactgtcatttttgtgcgtttatggagttagaaatagggagataggactaaaattgcaaaatatatatagtttatggacgattttgttcgattta 42035834  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || ||  ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  42035833 aaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 42035775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 599693 - 599535
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||||||| || ||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  599693 actaaaactgtcatttgtgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaacatataatttagggatgattttgttcgattta 599594  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  599593 aaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 599535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 28254811 - 28254969
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||  |||||||||| ||| ||||||||||||||||    
T  28254811 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaattatatagtttagggacgattttgttcgattta 28254910  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  28254911 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 28254969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 15255993 - 15255856
Alignment:
Q  22 catttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcg 121  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||||| || || ||||| |||||    
T  15255993 catttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcg 15255894  T
Q  122 tgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  15255893 tgagttggtcaaaatgcaaggaccaaaagtgtaattaa 15255856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 18049978 - 18050136
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaa 102  Q
    ||||| ||| |||| ||||| ||| |||||||| ||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||||    
T  18049978 taaaactgttatttctgtgcgtttctggagttgaaaatagggagataggattaaaacagcaaaaaacatatagtttagggacgattttgttcgatttaaa 18050077  T
Q  103 aaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    | || || ||||| |||||||||||||||||||||  |||||||||| |||||||||||    
T  18050078 agaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaaac 18050136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 35427197 - 35427355
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||| ||| ||||| ||||||||| ||||| |||| ||| ||||||||||| ||||    
T  35427197 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagatgggactaaaactgcaaaaaatatataatttagggacgattttgttcggttta 35427296  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || ||  ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  35427297 aaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 35427355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 159
Target Start/End: Complemental strand, 2208849 - 2208717
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaaaac-atatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagt 126  Q
    |||| ||| ||||||||||||| || |||||||| ||||||  |||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||    
T  2208849 tggaattgaaaatagggagatatgactaaaattgtaaaaaaatatatagtttaaggacgattttgttcgatttaaaaaagataggacaattttcgtgagt 2208750  T
Q  127 tggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||| |||||||||||||||    
T  2208749 tggtcaaaatggtaggatcaaaagtgtaattaa 2208717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 34799468 - 34799626
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| | |||||| ||||| ||| |||||||||||||||| |||||||| ||||| |||||||||||||||||||| |||  |||||||||||||||    
T  34799468 actaaaactatcatttatgtgcgtttatggagttggaaataggaagataggactaaaactgcaaaaaacatatagtttagggacaattttgttcgattta 34799567  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||| | ||||||||||||  ||||||||||||||||||||    
T  34799568 aaagaggtaggaccaatttcgttaattggtcaaaatgaaaggaccaaaagtgtaattaa 34799626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 41260646 - 41260804
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  41260646 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 41260745  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || || || |||||||||||| ||||||||  | |||||||||| |||||||    
T  41260746 aaagaggtatgatcaatttcgtgagttgatcaaaatgcaatgaccaaaagtataattaa 41260804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 16578256 - 16578111
Alignment:
Q  14 tttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgac 113  Q
    ||||| ||| ||| |||||||||||||||||||||||||  |||| ||||||||||||||| |||| ||| ||||||||||||||||||| || || |||    
T  16578256 tttttttgcgtttctggagttggaaatagggagataggaccaaaactgcaaaaaacatataatttagggacgattttgttcgatttaaaagaggtaggac 16578157  T
Q  114 cattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || |||||||||||||||||||||  || ||||||| |||||||||    
T  16578156 caatttcgtgagttggtcaaaatgcaagaaccaaaaatgtaattaa 16578111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 35694255 - 35694423
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaaca--------tatagtttaaggatgattttgt 92  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||||||| || |||||  |||||||| |        ||||||||||||| ||||||||    
T  35694255 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataagactaaaacagcaaaaaaaaaaaaaaaatatagtttaaggacgattttgt 35694354  T
Q  93 tcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||||||  || ||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  35694355 tcgatttaaaaaatgtaggaccatttttgtgagttagtcaaaatggaaggaccaaaagtgtaattaaac 35694423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 5731197 - 5731355
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||||||||| | ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  5731197 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatagaactaaaactgcaaaaaacatatagtttatggacgattttgttcgattta 5731296  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     ||||| ||  |||| |||| ||||||||||||||||  | ||| |||||| |||||||    
T  5731297 taaaaggtagaaccaatttcctgagttggtcaaaatgcaatgacaaaaagtataattaa 5731355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 7911001 - 7911159
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||| | |||| || ||||| ||||||||| |||||||||| ||| ||||||||||||||||    
T  7911001 actaaaactgtcatttctgtgcgtttatggagttgaaaatagagggatatgactaaaactgcaaaaaatatatagtttagggacgattttgttcgattta 7911100  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || ||  ||||||||||||||||||||||||||  ||||  ||||||||||||||    
T  7911101 aaagaggtagaaccattttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaa 7911159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 35694031 - 35693871
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaa--acatatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| || |||||  | |||||||||| ||| |||||| |||||||    
T  35694031 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgaaaaaaatatatatagtttatggacgattttattcgatt 35693932  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| || ||  | ||||||||| | ||||||||||||  |||| |||||||||||||||    
T  35693931 taaaagaggtagaatcattttcgtaaattggtcaaaatgcaaggatcaaaagtgtaattaa 35693871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 42036156 - 42036293
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||||||||||||| |||||||||||||| |   ||| || ||||| ||||||| ||||||||||||| ||| |||||||||||||||    
T  42036156 actaaaactgtcatttttgtgcatttctggagttggaaatatgagaatacgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 42036255  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatg 137  Q
    |||| || || || ||||||||| ||||||||||||||    
T  42036256 aaaagaggtaagatcattttcgtaagttggtcaaaatg 42036293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 6115495 - 6115654
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| | |||||| ||||| |||||||| | ||||| | ||||| ||||||||||||| ||| |||||||||||||||    
T  6115495 actaaaactgtcatttctgtgcgtttcttgagttgaaaataaggagatagaactaaaactacaaaaaaacatatagtttagggacgattttgttcgattt 6115594  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||||| ||||| ||||||||||||||   |||||||||||| |||||||    
T  6115595 aaaagaggtaggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaa 6115654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 35426974 - 35426892
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaagga 83  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35426974 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggagtaaaattgcaaaaaacatatagtttaagga 35426892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 7910778 - 7910619
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagata--ggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||| ||||||||| | ||||| ||||||  ||||||  ||| |||| | |||||||||||||| |||| ||| ||||||||||||||    
T  7910778 actaaaactgtcatttctgtgcatttcttgagttagaaataaagagatataggactaaact-gcaaaaaacatataatttagggacgattttgttcgatt 7910680  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| || ||  ||||||||||||||||| ||||||||  |||||||||| |||||||||    
T  7910679 taaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaa 7910619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 26252962 - 26252838
Alignment:
Q  9 tgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagat 108  Q
    |||||||| || || ||| ||||||||||||||||||||||||| ||||| |||| ||||||||||||||| ||| ||||||||||||||||||| ||||    
T  26252962 tgtcatttctgagcgtttctggagttggaaatagggagataggactaaaactgcacaaaacatatagtttagggacgattttgttcgatttaaaagagat 26252863  T
Q  109 acgaccattttcgtgagttggtcaa 133  Q
       |||| |||||||| || |||||    
T  26252862 gttaccaatttcgtgaattagtcaa 26252838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 35426893 - 35426843
Alignment:
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35426893 gaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaaac 35426843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 18674256 - 18674151
Alignment:
Q  54 taaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 153  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||||||  |  |  |||| |||||||| ||||||||| ||  |||||||| |||||    
T  18674256 taaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagtggaagaaccaatttcgtgaattggtcaaagtgcaaggaccaagagtgt 18674157  T
Q  154 aattaa 159  Q
    ||||||    
T  18674156 aattaa 18674151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 28877276 - 28877434
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattta 100  Q
    ||||||||||||||| | | | ||| |||||||  ||||||  || ||||| |||||  ||||||||||| |||||| | |||  ||||||||| ||||     
T  28877276 ctaaaattgtcatttatatacgtttctggagttaaaaataga-aggtaggactaaaacagcaaaaaacatgatagtt-agggacaattttgttcaatttg 28877373  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||| || ||  ||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  28877374 aaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaac 28877434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 18805322 - 18805164
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaa 101  Q
    |||||| |||||||| | ||  ||| |||||||| | ||||| || ||||| |||||  | |||||||||||||||   |||   |||||||||||||||    
T  18805322 ctaaaactgtcatttctctgtgtttctggagttgaagatagg-aggtaggactaaaacaggaaaaaacatatagttctgggacagttttgttcgatttaa 18805224  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaaca 162  Q
    || ||| |  |||||||||||||| | |||||||||   ||||||||||||||||||||||    
T  18805223 aagaga-agaaccattttcgtgagcttgtcaaaatgcagggaccaaaagtgtaattaaaca 18805164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 10047066 - 10047155
Alignment:
Q  46 gataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaa 135  Q
    ||||||||||||| |||||||| ||| ||||||||  ||  |||||||||||||||||| | | | ||| |||||||||||||| ||||||    
T  10047066 gataggattaaaactgcaaaaa-catgatagtttagagaccattttgttcgatttaaaagaaacaagactattttcgtgagttgatcaaaa 10047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 162
Target Start/End: Complemental strand, 2617853 - 2617745
Alignment:
Q  55 aaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 153  Q
    ||||||||||||||||| ||||| ||||||  | ||||||| |||| ||||||| | ||  | ||||||||   ||||||||||  ||||| |||| |||    
T  2617853 aaaattgcaaaaaacatgatagtataaggactactttgttcaatttgaaaaagacatgattaatttcgtgaaccggtcaaaatgcaaggacaaaaaatgt 2617754  T
Q  154 aattaaaca 162  Q
    |||||||||    
T  2617753 aattaaaca 2617745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 7e-64; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 25637583 - 25637742
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||  ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  25637583 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 25637682  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 160  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25637683 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 25637742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 7732872 - 7733030
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    |||| |||||| |||| ||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  7732872 actagaattgttatttctgtgcatttatggagttgaaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacgattttgttcgattta 7732971  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  7732972 aaaaagataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 7733030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 9181693 - 9181535
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||||||||||||||    
T  9181693 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaatatagtttaaggacgattttgttcgattta 9181594  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9181593 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9181535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 15712526 - 15712368
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| | ||||||||||||||||||||||| ||||| | ||||||| |||||||||||||| ||||||||||||||||    
T  15712526 actaaaactgtcatttatgtgcgtttctagagttggaaatagggagataggactaaaactacaaaaaatatatagtttaaggacgattttgttcgattta 15712427  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15712426 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 15712368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 5745800 - 5745641
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||| ||||||||||||||| || ||||| |||||||||||||||||||||| | ||||||||||||||||    
T  5745800 actaaaactgtcatttatgtgcgtttctggagtaggaaatagggagataagactaaaactgcaaaaaacatatagtttaagaaagattttgttcgattta 5745701  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 160  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5745700 aaaaagatatgaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaaa 5745641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 48247976 - 48248135
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  48247976 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagatgggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 48248075  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48248076 aaaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 48248135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 16081684 - 16081842
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  16081684 actaaaactgtcatttttgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggatgattttgttcgattta 16081783  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || || || |||||||||||||||||||||  ||||||||| ||||||||||    
T  16081784 aaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaggtgtaattaa 16081842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 26026703 - 26026863
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| | ||| ||||||||||||||||||||||||||  | ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  26026703 actaaaactgtcatttctatgcgtttttggagttggaaatagggagataaaactaaaactgcaaaaaacatatagtttaaggatggttttgttcgattta 26026802  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
     |||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  26026803 taaaagataggaccattttcgtgaatttgtcaaaatagtaggaccaaaagtgtaattaaac 26026863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 14311672 - 14311830
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    |||||||||||||||| ||||| ||| | |||||||||||||||||||| || ||||| ||||||||||||||||||||| || ||||||||||||||||    
T  14311672 actaaaattgtcatttctgtgcgtttctagagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaagacgattttgttcgattta 14311771  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| ||||||||| |||||||||||||| ||||| ||| ||||||||||||||    
T  14311772 aaaaagataggaccatttttgtgagttggtcaaattggtacgacaaaaagtgtaattaa 14311830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 16081460 - 16081302
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||  |||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  16081460 actaaaactgtcatttctgtgtgtttttggagttggaaataggtagataggactaaaactgcaaaaaacaaatagtttaaggacgattttgttcgattta 16081361  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||| | ||||||||||||||| | ||||||||||||||||||||    
T  16081360 aaaaagataggaccatttccatgagttggtcaaaatagaaggaccaaaagtgtaattaa 16081302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 786944 - 786785
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| ||||| || ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||  ||||||||||||||    
T  786944 actaaaactgtcacttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggaaaattttgttcgattt 786845  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||| || |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  786844 aaaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaa 786785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 27245601 - 27245747
Alignment:
Q  13 atttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacga 112  Q
    |||| ||||| ||| |||||||||||||||||||||| || ||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||    
T  27245601 atttctgtgcgtttctggagttggaaatagggagatatgactaaaattgcaaaatacatataatttaaggacgattttgttcgatttaaaaaagatagga 27245700  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||    
T  27245701 ccattttcgtgagttgatcaaaatggtaagaccaaaagtataattaa 27245747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 42 - 159
Target Start/End: Complemental strand, 16917833 - 16917716
Alignment:
Q  42 gggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtag 141  Q
    |||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16917833 gggagatatgactaaaactgcaaaaaacatatagtttaaggaggattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtag 16917734  T
Q  142 gaccaaaagtgtaattaa 159  Q
    ||||||||||||||||||    
T  16917733 gaccaaaagtgtaattaa 16917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 7732649 - 7732491
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  7732649 actaaaactgtcatttatgtgcgtttatggagttgaaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 7732550  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||| ||||||||  |||||||||| |||||||||    
T  7732549 aaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 7732491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 28687746 - 28687596
Alignment:
Q  9 tgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagat 108  Q
    |||||||| ||||| ||| |||||||||||||||| |||||||| || || ||||||||| |||||||||||||| |||||||||||||||| |||||||    
T  28687746 tgtcatttatgtgcgtttctggagttggaaataggaagataggactagaactgcaaaaaaaatatagtttaaggacgattttgttcgatttataaaagat 28687647  T
Q  109 acgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |  |||||||||||||||||||||||||| || ||||||||||||||||||    
T  28687646 agaaccattttcgtgagttggtcaaaatgatatgaccaaaagtgtaattaa 28687596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 11971499 - 11971337
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattg----caaaaaacatatagtttaaggatgattttgttcga 96  Q
    ||||||| |||||||| ||||  ||| | || |||||||||||||||||||| ||||| ||     ||||||||||||||||||||| ||||||||||||    
T  11971499 actaaaactgtcatttatgtgtgtttctagaattggaaatagggagataggactaaaactgtaaaaaaaaaacatatagtttaaggacgattttgttcga 11971400  T
Q  97 tttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  11971399 tttaaaaaagataggaccattttcgtgagtaggtcaaaatggtaggaccaaaagtataattaa 11971337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28687884 - 28688044
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  28687884 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaagtgcaaaaaacatatagtttagggacgattttgttcgattta 28687983  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaaca 162  Q
    ||| || || || || |||||||||||||||||||||  |||||||||| ||||||||||||    
T  28687984 aaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaa-tgtaattaaaca 28688044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 26048332 - 26048489
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||||||  |||||||| ||||||    
T  26048332 actaaaactgtcatttatgtgcatttttggagttggaaatagggagatatgactaaaactgcaaaa-acatatagtttaaggacaattttgtttgattta 26048430  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| ||||||||||||||||||| |  |||| |||||||||||||||    
T  26048431 aaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggaacaaaagtgtaattaa 26048489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 5334020 - 5333883
Alignment:
Q  22 catttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcg 121  Q
    ||||| |||||| |||||||||| |||| || ||||| |||||||||||||||||||| ||| ||||||||||||||||||| || ||||||||||||||    
T  5334020 catttctggagtaggaaatagggggatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtacgaccattttcg 5333921  T
Q  122 tgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||  |||| |||||||||||||||    
T  5333920 tgagttggtcaaaatgcaaggatcaaaagtgtaattaa 5333883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 39388651 - 39388811
Alignment:
Q  1 actaaaattgtcattttt-gtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||||| |||| |||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||  || ||||||||||||||    
T  39388651 actaaaactgtcattttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaaaacatatagtttagagacgattttgttcgatt 39388750  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| || || ||| | |||||||||||||||||||||  ||||||||||||||||||||    
T  39388751 taaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 39388811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 26026479 - 26026317
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| |||||||| ||||||||||||| || ||||| ||||||||| ||||||||||| ||| |||||||||||||||    
T  26026479 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataagactaaaactgcaaaaaaacatatagtttatggacgattttgttcgattt 26026380  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaaca 162  Q
    |||| || || ||||| ||||||||| ||||||||||   |||||||||||||||||||||||    
T  26026379 aaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaaaca 26026317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 25637357 - 25637200
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgatttaa 101  Q
    ||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| | ||||||| ||||||||||| ||| |||||||||||||||||    
T  25637357 taaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactacaaaaaaacatatagtttagggacgattttgttcgatttaa 25637258  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || || || ||||| |||| |||||||||||| |||  ||||||||||||||||||||    
T  25637257 aagaggtaggaccaatttcatgagttggtcaatatgcaaggaccaaaagtgtaattaa 25637200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 9181794 - 9181955
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa---aacatatagtttaaggatgattttgttcgat 97  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||| || ||||   ||||||||||||| ||| |||||||||||||    
T  9181794 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaaaaacatatagtttagggacgattttgttcgat 9181893  T
Q  98 ttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || || || || |||||||| ||||||||||||  |||| |||||||||||||||    
T  9181894 ttaaaagaggtatgatcaatttcgtgaattggtcaaaatgcaaggatcaaaagtgtaattaa 9181955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 24929688 - 24929851
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaaca-----tatagtttaaggatgattttgttcg 95  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||||| |     ||||||||| ||| ||||||||| |    
T  24929688 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaaaatatatatagtttagggacgattttgtttg 24929787  T
Q  96 atttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| || || ||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  24929788 atttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 24929851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 27245365 - 27245206
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| | |||||| ||||| ||| |||||||||||||| |||||||||| ||||| ||||||||| ||||| ||||  ||| |||||||||||||||    
T  27245365 actaaaactatcatttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaaaacatatggtttggggacgattttgttcgattt 27245266  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  27245265 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 27245206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 35161196 - 35161342
Alignment:
Q  11 tcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgatttaaaaaagata 109  Q
    |||||| ||||| ||| |||||||||||||||||||||| || ||||| ||||||| ||||||||||||| ||| ||||||||||||||||||| || ||    
T  35161196 tcatttatgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaaaagaggta 35161295  T
Q  110 cgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 156  Q
     ||||| || ||||||||||||||||||  |||||||||||||||||    
T  35161296 ggaccaattccgtgagttggtcaaaatgcaaggaccaaaagtgtaat 35161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 2758083 - 2758241
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| | ||| ||| ||||||| ||||||||| |||| || ||||  |||||||||||||||||||| ||| ||||||||||||||||    
T  2758083 actaaaactgtcatttatatgcgtttctggagttagaaatagggggatatgactaaacctgcaaaaaacatatagtttatggacgattttgttcgattta 2758182  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || ||  |||||||||||||||||  |||||||  ||||||||||||||||||||    
T  2758183 aaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaagtgtaattaa 2758241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 5746024 - 5746183
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgc--aaaaaacatatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||||||| || |||||||||  ||||||||||||||||| ||| | ||||||||||||    
T  5746024 actaaaactgtcatttatgtgcgtttatggagttggaaatagggagataagactaaaattgcaaaaaaaacatatagtttatggacggttttgttcgatt 5746123  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| ||  | || || ||||||||||| |||||||||  ||||||||||||||||||||    
T  5746124 taaaagaggca-gatcaatttcgtgagttagtcaaaatgcaaggaccaaaagtgtaattaa 5746183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 48247752 - 48247590
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaaca----tatagtttaaggatgattttgttcga 96  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||||||| |    |||| |||| ||| ||||||||| ||    
T  48247752 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaaaaatatatactttagggacgattttgtttga 48247653  T
Q  97 tttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||| || || ||||| |||||||||||| ||||||||  ||||||||||||||||||||    
T  48247652 tttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 48247590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 26048109 - 26047960
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaa-aaaacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||| |||||          ||| |||||||||||||||||||  ||||| ||||||||    
T  26048109 actaaaactgtcatttctgtgcgtttctggagttggaaatagggacatagg----------caacaaaacatatagtttaaggacaattttattcgattt 26048020  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| ||||||||||||||||||||| ||||||||| | |||||||||||||||    
T  26048019 aaaaaagatatgaccattttcgtgagttggtcgaaatggtagaatcaaaagtgtaattaa 26047960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 5334257 - 5334362
Alignment:
Q  54 taaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 153  Q
    ||||| ||||||||| |||||||||| ||| ||||||||||||||||||| || || ||| |||||||||||||||||||||||  ||||||||||||||    
T  5334257 taaaactgcaaaaaatatatagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaagtgt 5334356  T
Q  154 aattaa 159  Q
    ||||||    
T  5334357 aattaa 5334362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 9394117 - 9394272
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaa 101  Q
    |||||| |||||||| | ||  |||||| ||||||||||||| |||||||| ||||| ||||||||| |||||||||| ||| | ||||||||||||| |    
T  9394117 ctaaaactgtcatttctttgtgtttttgaagttggaaatagg-agataggactaaaactgcaaaaaatatatagtttagggacggttttgttcgatttga 9394215  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| || ||||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  9394216 aaaaggtaggaccatttttgtgagctggtcaaaatgcga-gaccaaaagtgtaattaa 9394272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 34595157 - 34595315
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| |||||||| ||||| || | ||| | ||||| |||||||| ||| |||||||| ||| |||||||||||||||    
T  34595157 actaaaactgtcatttctgtgcgtttctggagttgaaaataagggggtagcactaaaactgcaaaaa-catgatagtttagggacgattttgttcgattt 34595255  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| |   | |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  34595256 aaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 34595315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 11973787 - 11973947
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| || ||||||||||||| |||||| | ||||| |||||||| ||| || |||| ||| |||||||||| |||||    
T  11973787 actaaaactgtcatttctgtgcgtttctgaagttggaaataggaagatagaactaaaactgcaaaaaccatttaatttagggacgattttgttcaattta 11973886  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||| || ||  |||| ||||||  |||||||||||||  |||||||||| |||||||||||    
T  11973887 aaagaggtagaaccaatttcgtacgttggtcaaaatgcaaggaccaaaaatgtaattaaac 11973947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 787167 - 787331
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaa----aaacatatagtttaaggatgattttgttcga 96  Q
    ||||||| | |||||| ||||| ||| |||||||| ||||| | ||||| || ||||| | ||||    ||||| |||||||| ||| ||||||||||||    
T  787167 actaaaactatcatttatgtgcgtttctggagttgaaaatatgaagataagactaaaactacaaattaaaaacaaatagtttagggacgattttgttcga 787266  T
Q  97 tttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||||| || || ||||||||||||||||||||||||||   || |||||||||||||||||||    
T  787267 tttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaaac 787331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 14311477 - 14311318
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattg-caaaaaacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||  ||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||| ||| |||||| ||| ||||    
T  14311477 actaaaactgtcatttatgtgtgtttatggagttggaaatagggagataggattaaaactgtaaaaaaacatatagtttagggacgattttattcaattt 14311378  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || ||  |||| |||  ||||||||| ||||||  || ||||||| | |||||||    
T  14311377 aaaagaggtataaccaattttatgagttggttaaaatgcaagtaccaaaaatataattaa 14311318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 35160746 - 35160654
Alignment:
Q  71 tatagtttaaggatgattttgttcgatttaaaaaaga--tacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||| |||||| | ||||| ||||||||||||||| |  || ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35160746 tataatttaagaacgatttagttcgatttaaaaaaaaaatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaaataaac 35160654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 5184546 - 5184488
Alignment:
Q  10 gtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa 68  Q
    ||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||    
T  5184546 gtcatttctgtgcatttttggagttggaaatagggagataagactaaaattgtaaaaaa 5184488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 35579058 - 35578902
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattta 100  Q
    |||||| |||||||| | ||| ||| |||||||| |||||||  | ||||||||||| |||||||||||| |||||||| | | | |||||||||||||     
T  35579058 ctaaaaatgtcatttctctgcgtttctggagttgaaaataggatg-taggattaaaactgcaaaaaacatgatagtttatg-acggttttgttcgatttg 35578961  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||  |  | ||||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  35578960 aaagtggcaggaccatttttgtgagctggtcaaaatgcaatgaccaaaagtgtaattaa 35578902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 49064172 - 49064037
Alignment:
Q  23 atttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcg 121  Q
    |||| |||||||| ||||||| || ||||| ||||| |||||||| ||| |||||||| ||| |||||||||| |||| ||| ||  |  ||||||||||    
T  49064172 atttctggagttgaaaatagg-agttaggactaaaagtgcaaaaa-catgatagtttatggaagattttgttctatttgaaagaggcaataccattttcg 49064075  T
Q  122 tgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| ||||||||||   ||||||||||||||||||||    
T  49064074 tgagctggtcaaaatacgaggaccaaaagtgtaattaa 49064037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 40669689 - 40669753
Alignment:
Q  97 tttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||  || || ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  40669689 tttaaaaaaagtatgatcattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaaac 40669753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 159
Target Start/End: Complemental strand, 39136776 - 39136689
Alignment:
Q  72 atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| ||| ||||||||||||||| ||| ||  |  |||||||||||||| |||||||||||  |||| |||||||||||||||    
T  39136776 atagtttagggacgattttgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatgcaaggatcaaaagtgtaattaa 39136689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 39136991 - 39137076
Alignment:
Q  74 agtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| ||| ||||||||||||||||||| ||  | |||||||||||||||  |||||||||   |||| |||||||||||||||    
T  39136991 agtttatggacgattttgttcgatttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaa 39137076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 159
Target Start/End: Complemental strand, 9393869 - 9393739
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagt 126  Q
    |||||||| ||||||| || ||||| |||||  ||||||||||| |||||||| ||| | ||||||||||||| ||| ||  | ||| |||||||||||     
T  9393869 tggagttgaaaatagg-aggtaggactaaaacagcaaaaaacatgatagttta-ggacggttttgttcgatttgaaagaggcaagacaattttcgtgagc 9393772  T
Q  127 tggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || ||||||||  |||| |||||||||||||||    
T  9393771 tgatcaaaatgcgaggatcaaaagtgtaattaa 9393739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 33880970 - 33881133
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa--cat-atagtttaaggatga--ttttgttcg 95  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||| |||| || ||||| |||||||||  ||| |||||||| ||| ||  |||||||||    
T  33880970 actaaaactgtcatttatgtgcgtttctggagttgaaaataggg-gataagactaaaactgcaaaaaaaacatgatagtttatggacgagattttgttcg 33881068  T
Q  96 atttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 160  Q
    ||| |||| | | |  |||||||||||||  | |||||||||  |||| |||||||| |||||||    
T  33881069 attgaaaacatacagaaccattttcgtgaactagtcaaaatgcgaggatcaaaagtgcaattaaa 33881133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 34594714 - 34594586
Alignment:
Q  30 gagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttg 128  Q
    |||||| |||||||| | ||||| ||||| |||||||| ||| |||||||| ||||||||||||| |||| |||| |     ||  |||||||||||||     
T  34594714 gagttgaaaataggggg-taggactaaaactgcaaaaa-catgatagtttagggatgattttgtttgattgaaaagatgcgagataattttcgtgagtta 34594617  T
Q  129 gtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||  ||||||||||||||||||||    
T  34594616 gtcaaaatgcgaggaccaaaagtgtaattaa 34594586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 159
Target Start/End: Complemental strand, 4477821 - 4477705
Alignment:
Q  43 ggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtag 141  Q
    |||| ||||| ||||| |||||||| ||| |||||||| ||| |||||| ||| |||||||| ||    |||||||||||||| ||||||||||||  ||    
T  4477821 ggaggtaggactaaaactgcaaaaa-catgatagtttagggacgattttattcaatttaaaagaggcgggaccattttcgtgaattggtcaaaatgtaag 4477723  T
Q  142 gaccaaaagtgtaattaa 159  Q
    || ||| |||||||||||    
T  4477722 gatcaatagtgtaattaa 4477705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 35160936 - 35160892
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaaaacata 72  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||    
T  35160936 tggagttgaaaatagggagataggactaaaattacaaaaaacata 35160892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 45815441 - 45815347
Alignment:
Q  63 aaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||| ||| | ||||||||||||| ||| ||  | ||||||||||   || |||||||||||  ||||||||||||||||||||    
T  45815441 aaaaaacatgatagtttagggacggttttgttcgatttgaaagaggcatgaccattttc---agctggtcaaaatgcaaggaccaaaagtgtaattaa 45815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 5184479 - 5184429
Alignment:
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||| ||||||||||||||||||||   |||||||||| |||||||||||    
T  5184479 gaccaatttcgtgagttggtcaaaatccaaggaccaaaaatgtaattaaac 5184429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 21420089 - 21420053
Alignment:
Q  195 ttcacgtgtattacaatgtcaatttcaacaattaacc 231  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  21420089 ttcacgtatattacaaggtcaatttcaacaattaacc 21420053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 35579294 - 35579428
Alignment:
Q  24 tttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgt 122  Q
    ||||| |||||| ||||||| || || || ||||| |||||||||||| |||||||| ||| | ||||||| ||||| ||| ||  |  | |||||||||    
T  35579294 tttttagagttgaaaatagg-aggtatgactaaaactgcaaaaaacatgatagttta-ggacggttttgtttgatttgaaagaggcataatcattttcgt 35579391  T
Q  123 gagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || ||||||||  |||| |||||||||||||||    
T  35579392 gagctgatcaaaatgcgaggatcaaaagtgtaattaa 35579428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 44832838 - 44832874
Alignment:
Q  198 acgtgtattacaatgtcaatttcaacaattaacctta 234  Q
    |||| |||||||||||||||||||| |||||||||||    
T  44832838 acgtatattacaatgtcaatttcaataattaacctta 44832874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 7e-64; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 3 - 257
Target Start/End: Original strand, 8419008 - 8419257
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaa 102  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| |||||||||| |||||||    
T  8419008 taaaattgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaa-atatagtttaaggacgattttgttcaatttaaa 8419106  T
Q  103 aaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaaca---nnnnnnnnnnnnnncatgattatttttaagcattcac 199  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||                 |||||||||||||||||||||||    
T  8419107 aaagataggaccatattcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcatttttttttttatttttcatgattatttttaagcattcac 8419206  T
Q  200 gtgtattacaatgtcaatttcaacaattaaccttagttttttcttgatcctcatgtgt 257  Q
    |||||       |||||||||||||||||||||| |||||||||||||||||||||||    
T  8419207 gtgta-------gtcaatttcaacaattaaccttggttttttcttgatcctcatgtgt 8419257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 28290029 - 28290187
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  28290029 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 28290128  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28290129 aaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 28290187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 15029694 - 15029852
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||| ||||||||||||| | | ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  15029694 actaaaactgtcatttatgtgcgtttctggagtttgaaatagggagatcgaactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 15029793  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15029794 aaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaa 15029852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 18149873 - 18149736
Alignment:
Q  22 catttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcg 121  Q
    ||||| |||||||||||||||||| |||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  18149873 catttatggagttggaaatagggaaataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggaccattttcg 18149774  T
Q  122 tgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  18149773 tgagttggtccaaatggtaggatcaaaagtgtaattaa 18149736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 19291518 - 19291359
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| |||||||||||||| ||||||| || ||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  19291518 actaaaactgtcatttctgtgcgtttatggagttggaaataaggagataagactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 19291419  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| ||||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  19291418 aaaaaagataggaccatttttgtgagttgttcaaaatagtaggaccaaaagtgtaattaa 19291359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 21371081 - 21371239
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  21371081 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttagggacgattttgtttgattta 21371180  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||  ||||||||||||||||  |||| |||||||||||||||    
T  21371181 aaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaa 21371239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 38900797 - 38900648
Alignment:
Q  9 tgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagat 108  Q
    |||||||| ||| | ||| ||||||||||||||||||||||||| ||||| ||||||||||||||| |||| ||| ||||||||||||||||||| || |    
T  38900797 tgtcatttatgtacgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatataatttagggacgattttgttcgatttaaaagaggt 38900698  T
Q  109 acgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 158  Q
    | || ||||||||||||||||||||||||  |||||||||||||||||||    
T  38900697 aggatcattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 28289845 - 28289687
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| || |||||||||||| |||| ||| ||||||||||||||||    
T  28289845 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaacatataatttagggacgattttgttcgattta 28289746  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||| | |||||||||||||||||||||  |||| |||||||||||||||    
T  28289745 aaagaggtatgactaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaa 28289687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 15115480 - 15115635
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||||| ||||||||||||||| |||| || ||||| ||||||||   ||||||||||||| ||||||||||||||||    
T  15115480 actaaaactgtcatttatgtgcgttttttgagttggaaatagggcgatatgactaaaactgcaaaaa---tatagtttaaggacgattttgttcgattta 15115576  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || |||||||||||||||||||||||||||  |||| |||||||||||||||    
T  15115577 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaa 15115635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 18150108 - 18150267
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    |||||||  ||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||||||||||||||||||    
T  18150108 actaaaacggtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttagggatgattttgttcgattt 18150207  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||||| ||||||||||| ||||||||   |||| || ||||||||||||    
T  18150208 aaaagaggtaggaccaatttcgtgagtttgtcaaaatacaaggatcacaagtgtaattaa 18150267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 38901027 - 38901183
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||  ||||||||| |||||||  | ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38901027 actaaaactgtcatttatgtgcgtttctgg--ttggaaataaggagatataactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 38901124  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| | || |||||||||||||  || |||||||||| ||||||||||||||||||||    
T  38901125 aaaagggtaggaccattttcgtgctttagtcaaaatggaaggaccaaaagtgtaattaa 38901183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 4967154 - 4967314
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa--aacatatagtttaaggatgattttgttcgatt 98  Q
    ||||||| | |||||| ||||| ||| | ||||| |||||||||| |||||| ||||| |||||||  ||||||||||||| ||| ||||||||||||||    
T  4967154 actaaaactatcatttatgtgcgtttctagagttagaaatagggatataggactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 4967253  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| || || ||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  4967254 taaaagaggtaagaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 4967314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 4966973 - 4966818
Alignment:
Q  4 aaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaa 103  Q
    |||| |||||||| ||||||||| | ||||||||||||||| |||| || ||||| ||| |||||||||||||||| ||| |||||||||||||||||||    
T  4966973 aaaactgtcatttctgtgcatttctagagttggaaataggg-gatatgactaaaactgctaaaaacatatagtttagggacgattttgttcgatttaaaa 4966875  T
Q  104 aagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 160  Q
     ||  |  || |||||||||||||||||||||||  |||||||||||||||||||||    
T  4966874 gaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 4966818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 39083521 - 39083362
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatata--gtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||| ||||  ||| |||||||||||||| ||||||| || ||||| ||||||||| |||||  ||||||| |  |||||||||||||    
T  39083521 actaaaactgtcatttctgtgtgtttctggagttggaaatatggagatatgactaaaactgcaaaaaatatatatagtttaagaacaattttgttcgatt 39083422  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  39083421 taaaaaaaataggaccattttcgtgagttggtcaaaatgataggatc-aaagtgtaattaa 39083362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 21370842 - 21370687
Alignment:
Q  14 tttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacata--------tagtttaaggatgattttgttcgatttaaaaaa 105  Q
    ||||| ||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||        |||||||| || |||||||||||||||||||||    
T  21370842 tttttttgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaaaataaaaaataatagtttaaagacgattttgttcgatttaaaaaa 21370743  T
Q  106 gatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||  ||||||||||| ||||||||||||| ||||||| |||| | |||||||||    
T  21370742 gatataaccattttcgtcagttggtcaaaatagtaggacaaaaaatataattaaac 21370687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 32697608 - 32697769
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa---aacatatagtttaaggatgattttgttcgat 97  Q
    |||||| ||||||||| ||||  ||| ||||||||||||||||||| ||  | ||||| |||||||   ||||||||||||| ||| |||| ||||||||    
T  32697608 actaaatttgtcatttctgtgtgtttctggagttggaaatagggaggtatcactaaaactgcaaaataaaacatatagtttagggacgattctgttcgat 32697707  T
Q  98 ttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || || ||||| |||||||||||||||||||||  | ||||||||||||||||||    
T  32697708 ttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaa 32697769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 14340792 - 14340954
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaaca---tatagtttaaggatgattttgttcgat 97  Q
    ||||||| |||||||| | | | |||||||||||||||||| |||||||||| ||||| | ||||||| |   ||||||||| ||| |||||||||||||    
T  14340792 actaaaactgtcatttctctacgtttttggagttggaaataaggagataggactaaaactacaaaaaaaaatatatagtttatggacgattttgttcgat 14340891  T
Q  98 ttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 160  Q
    |||||| |  || ||||| |||||||||||||||||||||  || ||||||| ||||||||||    
T  14340892 ttaaaagatgtatgaccaatttcgtgagttggtcaaaatgcaagtaccaaaaatgtaattaaa 14340954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 14340475 - 14340400
Alignment:
Q  85 gattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 160  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  14340475 gattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaaa 14340400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 10721945 - 10721789
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattta 100  Q
    |||||| |||||||| | | | ||| |||||||| ||||||| || ||||| ||||| |||||||||||| |||||||| ||| |||||||||||||||     
T  10721945 ctaaaactgtcatttctctacgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacgattttgttcgatttg 10721848  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| ||| | ||||||||||||||| |||||||||||  |||||||||| |||||||||    
T  10721847 aaagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaa 10721789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 5161744 - 5161620
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| | ||| |||||| ||||||||||||| ||||| || ||||| ||||||||| |||||| ||||| ||  ||||||||||||||    
T  5161744 actaaaactgtcatttctatgcgtttttgaagttggaaataggaagataagactaaaactgcaaaaaaacatataatttaaagacaattttgttcgattt 5161645  T
Q  100 aaaaaagatacgaccattttcgtga 124  Q
    |||||||||| ||| ||||||||||    
T  5161644 aaaaaagatatgacaattttcgtga 5161620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 22651506 - 22651348
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattt 99  Q
    ||||||| || ||||||||||| ||| |||||||| ||||| |||| ||||| ||||| |||||||| ||| |||||||||||||| ||||||| |||||    
T  22651506 actaaaactgccatttttgtgcgtttctggagttgaaaataaggaggtaggactaaaactgcaaaaa-catgatagtttaaggatggttttgtttgattt 22651408  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| ||  | |||||||| |||||| ||||||||||   || ||||||| |||||||||    
T  22651407 aaaagaggcatgaccatttccgtgagctggtcaaaatacgagaaccaaaaatgtaattaa 22651348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 5161974 - 5162112
Alignment:
Q  22 catttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttc 120  Q
    ||||| || ||||| |||| ||||||||||| ||||||||||||| |||||||| |||| ||| ||||||||||||||||||| || || ||| | | ||    
T  5161974 catttctgaagttgtaaattgggagataggactaaaattgcaaaaaaacatataatttagggacgattttgttcgatttaaaagaggtatgactaatctc 5162073  T
Q  121 gtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     ||||||||||||||||  ||||  |||| |||||||||    
T  5162074 atgagttggtcaaaatgcaaggataaaaaatgtaattaa 5162112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 27307220 - 27307064
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattta 100  Q
    |||||| |||||||| | ||| ||| |||||||| ||||||| || || || ||||| |||||||||||| |||||||| |||||||||||||| ||||     
T  27307220 ctaaaactgtcatttctatgcgtttctggagttgaaaatagg-aggtaagactaaaactgcaaaaaacatgatagttta-ggatgattttgttcaatttg 27307123  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| | | | |||||||||| | ||||||||||||||  || |||||||||||||||||    
T  27307122 aaagaaacatgaccattttcataagttggtcaaaatgcgagaaccaaaagtgtaattaa 27307064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 16752741 - 16752585
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaa 101  Q
    |||||| | |||||| | ||| ||| |||||||| ||||||| || || ||  |||| |||||||||||||||||||| ||| ||||||||||||||| |    
T  16752741 ctaaaactatcatttctttgcgtttatggagttgaaaatagg-aggtatgacaaaaactgcaaaaaacatatagtttatggacgattttgttcgatttga 16752643  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || |   | || |||||||||||| |||||||||||   |||||||||||||||||||    
T  16752642 aagaagcatgatcattttcgtgagctggtcaaaatgcagggaccaaaagtgtaattaa 16752585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 20266320 - 20266460
Alignment:
Q  21 gcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccatttt 119  Q
    |||||||||||| || |||||||| | ||||| ||||| | ||| || ||| |||||||| ||| ||||||||||||||| ||| ||| | |||||||||    
T  20266320 gcatttttggaggtgaaaataggggg-taggactaaaactacaacaaccatgatagtttagggacgattttgttcgatttgaaagagacatgaccatttt 20266418  T
Q  120 cgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||| || ||||||||||   ||||||||||||| ||||||||    
T  20266419 cgtaagctggtcaaaatacgaggaccaaaagtgcaattaaac 20266460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 22651767 - 22651854
Alignment:
Q  72 atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| ||| ||||||||||||||| ||||||  |  |||||||||||||| |||||||||||  ||||| ||||||||||||||    
T  22651767 atagtttatggacgattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaa 22651854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 27307444 - 27307603
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa---aacatatagtttaaggatgattttgttcgatt 98  Q
    |||||| |||||||| | ||||||| |||||||| ||||||| || ||||| ||||| | |||||   ||||||||||||| ||| | ||||||||||||    
T  27307444 ctaaaaatgtcatttctctgcatttctggagttgaaaatagg-aggtaggactaaaactacaaaaaaaaacatatagtttatggacggttttgttcgatt 27307542  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    | ||| ||  |  |||||||||||||  |||||||||||   ||||||||||| |||||||    
T  27307543 tgaaagagggagaaccattttcgtgaactggtcaaaatgcggggaccaaaagtctaattaa 27307603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 28495003 - 28494847
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattta 100  Q
    |||||||||||| || | ||| ||| |||||||| ||||||| || ||||| ||||| |||||||||||| |||||||| |||   |||||||||||||     
T  28495003 ctaaaattgtcacttctctgcgtttctggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacagttttgttcgatttg 28494906  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| ||  |  ||||||||| |||  |||||||||||  ||||||||||||||||||||    
T  28494905 aaagaggcagaaccattttcctgaactggtcaaaatgtaaggaccaaaagtgtaattaa 28494847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 17260676 - 17260763
Alignment:
Q  72 atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| ||||| ||||||||||||| ||| || ||  | ||||||||||| ||||||||||||  ||||||||||||| ||||||    
T  17260676 atagtttagggatggttttgttcgatttgaaagaggtagaatcattttcgtgaattggtcaaaatgcgaggaccaaaagtgcaattaa 17260763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 159
Target Start/End: Original strand, 41834473 - 41834602
Alignment:
Q  30 gagttggaaatagggagataggattaaaattgcaaaaaa-cat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagtt 127  Q
    |||||| ||||||| || ||||| ||||| ||||||||| ||| |||||||| ||| | ||||||||||| | ||| ||  | ||||||||||||||| |    
T  41834473 gagttgaaaatagg-aggtaggactaaaactgcaaaaaaacatgatagttta-ggacggttttgttcgatctgaaagaggcaggaccattttcgtgagct 41834570  T
Q  128 ggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||  ||||||||||||||||||||    
T  41834571 ggtcaaaatgcgaggaccaaaagtgtaattaa 41834602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 13557106 - 13557017
Alignment:
Q  48 taggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatg 137  Q
    ||||| ||||| |||||||||||| |||||||||| | ||||||||| ||||| ||| ||  | ||||||||||||||| |||||||||||    
T  13557106 taggactaaaactgcaaaaaacatgatagtttaag-acgattttgtttgatttgaaagaggcatgaccattttcgtgagctggtcaaaatg 13557017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 16752955 - 16753113
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa--cat-atagtttaaggatgattttgttcgatt 98  Q
    |||||| || ||||||| ||| ||| |||||||| ||||||| || ||||  ||||| |||||||||  ||| ||| |||| ||||| ||| ||||||||    
T  16752955 ctaaaactgccatttttctgcgtttctggagttgaaaatagg-agttaggtctaaaactgcaaaaaaaacatgataattta-ggatggtttcgttcgatt 16753052  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    | ||| ||  |  ||||||||||||||||||||||||||  | |||||||| |||||||||    
T  16753053 tgaaagaggcagaaccattttcgtgagttggtcaaaatgcgatgaccaaaaatgtaattaa 16753113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 32305977 - 32305843
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattta 100  Q
    |||||| |||||||| | ||  ||| |||||||| ||||| | || ||||| ||||| |||||||| ||| |||||||| ||| ||||||||||||||||    
T  32305977 ctaaaactgtcatttctctgtgtttctggagttgaaaataag-aggtaggactaaaactgcaaaaa-catgatagtttagggacgattttgttcgattta 32305880  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatg 137  Q
    ||| || ||  || ||||||||||| || ||||||||    
T  32305879 aaagaggtagaacaattttcgtgagctgatcaaaatg 32305843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 28495301 - 28495374
Alignment:
Q  86 attttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||| ||| ||  | ||||||||||||||| ||||||||||     ||||||||||||||||||    
T  28495301 attttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatatggagaccaaaagtgtaattaa 28495374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 38008336 - 38008494
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| | |||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38008336 actaaaactatcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 38008435  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38008436 aaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 38008494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 20127898 - 20127739
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  20127898 actaaaattgtcatttttgtgcgtttctggggttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 20127799  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20127798 aaaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaa 20127739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 11539799 - 11539640
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  11539799 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 11539700  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11539699 aaaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 11539640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 4356141 - 4356299
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  4356141 actaaaactgtcatttctgtgcgtttctggagttggaaatagggaaatagaattaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 4356240  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  4356241 aaaaagatatgaccattatcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 4356299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 4809264 - 4809422
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||||||||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||| |||||    
T  4809264 actaaaactgtcatttttgtgcttttttgtagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgactttgttcaattta 4809363  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4809364 aaaaacataggaccattttcgtgagttagtcaaaatggtaggaccaaaagtgtaattaa 4809422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13315658 - 13315494
Alignment:
Q  1 actaaaattgtcatttttgtgcatttt-tggagttggaaatagggagataggattaaaattgcaaaaaa---catatagtttaaggatgattttgttcga 96  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||||||||| ||||| |||||||||   ||||||||||||||| ||||||||||||    
T  13315658 actaaaactgtcatttctgtgcattttctggagttggaaatagggagataggactaaaactgcaaaaaaaaacatatagtttaaggacgattttgttcga 13315559  T
Q  97 tttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  13315558 tttaaaaaagatatgaccattttcatgagttggtcaaaatggtaggacaaaaagtgtaattaaac 13315494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 33920996 - 33921155
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| | ||||||||||||||||||||||| ||||| ||||||||| ||| |||||||| || |||||||||||||||    
T  33920996 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaaacatttagtttaaagacgattttgttcgattt 33921095  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33921096 aaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 33921155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 63118 - 62960
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| | ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||     
T  63118 actaaaactgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttt 63019  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  63018 aaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaa 62960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 20128122 - 20128280
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  20128122 actaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacatatagtttaaggacgattttgtttgattta 20128221  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||||| ||||||  ||||||||||||||||||||    
T  20128222 aaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaa 20128280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 43160397 - 43160554
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgatttaa 101  Q
    ||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||| |||||||||||    
T  43160397 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgatttagttcgatttaa 43160496  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  43160497 aaaagataggaccattttcgtgagtttgtcaaaatggtaggacctaaagtgtaattaa 43160554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 6949613 - 6949454
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||| ||||| |||||||||||||||    
T  6949613 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacatatagttaaaggacgattttgttcgattt 6949514  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  6949513 aaaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaa 6949454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 42192401 - 42192243
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  42192401 actaaaactgtcatttatgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 42192302  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  42192301 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaa 42192243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 16953098 - 16952938
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa--catatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||| ||||| ||| | |||||||||||||||||||| || |||||  ||||||||  ||||||||||||||| ||||||||||||||    
T  16953098 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaaggacgattttgttcgatt 16952999  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  16952998 taaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaa 16952938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 17061069 - 17060909
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa--catatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||| ||||| ||| | |||||||||||||||||||| || |||||  ||||||||  ||||||||||||||| ||||||||||||||    
T  17061069 actaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaaccgcaaaaaaaacatatagtttaaggacgattttgttcgatt 17060970  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  17060969 taaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaa 17060909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 4355916 - 4355758
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  4355916 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 4355817  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||| ||||||||||  ||||||||||||||||||||    
T  4355816 aaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaa 4355758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 16175734 - 16175892
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  16175734 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 16175833  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 158  Q
    |||| || || ||||| |||||||||||||| ||||||  |||||||||||||||||||    
T  16175834 aaaagaggtatgaccaatttcgtgagttggtaaaaatgtaaggaccaaaagtgtaatta 16175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 43216094 - 43216252
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    |||||||||||||||| ||||||||| ||||||||||||||| ||||||||| ||||| ||||||||| |||||||||| ||| ||||||||||||||||    
T  43216094 actaaaattgtcatttctgtgcatttctggagttggaaatagagagataggactaaaactgcaaaaaatatatagtttagggacgattttgttcgattta 43216193  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| ||||||||||||||||||| |  ||||| ||||||||||||||    
T  43216194 aaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaa 43216252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 44219805 - 44219647
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||| |||||||||||| ||||| ||||||||||||||| ||||||||  |||||||||||||||    
T  44219805 actaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaacatataatttaaggacaattttgttcgattta 44219706  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || || |||||| |||||||| ||||||||| ||||||||||||||||||||    
T  44219705 aaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaa 44219647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 15551071 - 15551220
Alignment:
Q  13 atttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgatttaaaaaagatacg 111  Q
    |||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||  ||||||| ||||||||||||||||||||| ||| |    
T  15551071 atttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacatataacttaaggacgattttgttcgatttaaaaaatatatg 15551170  T
Q  112 accattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  15551171 accatttttgtgagttggtcaaaatggtagggccaaaagtgtaattaaac 15551220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 38008110 - 38007953
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgatttaa 101  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||||||| ||||||||||| ||| |||||||||||||||||    
T  38008110 taaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggacgattttgttcgatttaa 38008011  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || || || ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  38008010 aagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 38007953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 11540023 - 11540181
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||| ||| || ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  11540023 actaaaactgtcatttctgtgcgtttctggagttggaaatagggatatatgactaaaactgcaaaaaacatatagtttatggacgattttgttcgattta 11540122  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || |||||||||||||||||||||||||||  | |||||||||| |||||||    
T  11540123 aaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaagtataattaa 11540181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 16953319 - 16953477
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||| |||   ||||||||||||||    
T  16953319 actaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacatatactttagggacatttttgttcgattta 16953418  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||| ||||||||||||||||  ||||||||||||||||||||    
T  16953419 aaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaa 16953477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 42192627 - 42192786
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||| |||| || ||||| ||||||||| ||| ||||||| ||| |||||||||||||||    
T  42192627 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaaacatctagtttagggacgattttgttcgattt 42192726  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  42192727 aaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 42192786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 5560159 - 5560054
Alignment:
Q  54 taaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 153  Q
    ||||| ||||||||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5560159 taaaactgcaaaaaatatatagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 5560060  T
Q  154 aattaa 159  Q
    ||||||    
T  5560059 aattaa 5560054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 44220028 - 44220188
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaataggg--agataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatt 98  Q
    ||||||||| |||||||||| | ||| |||||||||||||||||  ||||| || ||||| | |||||||||||||||||| ||| ||||||||| ||||    
T  44220028 actaaaattatcatttttgtacgtttctggagttggaaatagggggagatatgactaaaactacaaaaaacatatagtttagggacgattttgtttgatt 44220127  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| || |||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  44220128 taaaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaa 44220188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 13399807 - 13399962
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaa 102  Q
    ||||| |||||||| | ||| ||| |||||||||||||||||||||| || ||||| ||||||||| ||||||||||||||  |||||||||||||||||    
T  13399807 taaaactgtcatttctatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaatatatagtttaaggacaattttgttcgatttaaa 13399906  T
Q  103 aaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    | | ||| |||||||||||||||||||||||||||||||||| |||| || ||||||    
T  13399907 agaaata-gaccattttcgtgagttggtcaaaatggtaggactaaaattgcaattaa 13399962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 33920773 - 33920615
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| | ||| ||| |||||||| |||||||||||||||| ||||| |||||||| ||||||||||| ||| ||||||||||||||||    
T  33920773 actaaaactgtcatttctatgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaatcatatagtttagggacgattttgttcgattta 33920674  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || || || |||||||||||||||||||||  |||||||||| |||||||||    
T  33920673 aaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 33920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 649679 - 649530
Alignment:
Q  10 gtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagata 109  Q
    ||||||| ||||| ||| |||||||||||||||||||| || | ||||| |||||||||||||||||||| ||| ||||||||||||||||||| || ||    
T  649679 gtcatttatgtgcgtttctggagttggaaatagggagacagaactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggta 649580  T
Q  110 cgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     ||||| |||||| |||||||||| |||  ||||||||||||||||||||    
T  649579 ggaccaatttcgtaagttggtcaagatgcaaggaccaaaagtgtaattaa 649530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 15550835 - 15550674
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| |||||||| ||||||||| |||||| ||||| ||||||||| ||||||||||| ||| |||||||||||||||    
T  15550835 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 15550736  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||| || || ||||| |||||||||||||||| ||||  |||| |||||||||||||||||    
T  15550735 aaaagaggtaggaccaatttcgtgagttggtcagaatgcaaggatcaaaagtgtaattaaac 15550674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 4809040 - 4808882
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||| |||||||| ||||| | |||||||||||||||||| ||| ||||||||||||||||    
T  4809040 actaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactacaaaaaacatatagtttatggacgattttgttcgattta 4808941  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || || || |||||||||||||||||||||  || || |||| |||||||||    
T  4808940 aaagaggtaggatcaatttcgtgagttggtcaaaatgcaagaactaaaaatgtaattaa 4808882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 159
Target Start/End: Original strand, 32418560 - 32418689
Alignment:
Q  30 gagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttgg 129  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||||| || ||  | || |||||||| ||||    
T  32418560 gagttggaaatagggagataagattaaaactgcaaaaaatatatagtttaaggacgattttgttcgatttaaaagaggtagaatcaatttcgtgaattgg 32418659  T
Q  130 tcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| ||||||||||||| |||||||    
T  32418660 tcaaaatgataggaccaaaagtataattaa 32418689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 32418318 - 32418162
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||||| ||||||| || ||||| ||||||||| |||||||||| ||| ||||||||||||||      
T  32418318 actaaaaatgtcatttctgtgcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaatatatagtttagggacgattttgttcgatt-- 32418221  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||||||||||||||||||  ||||||| ||||||||||||    
T  32418220 aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaa 32418162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 43160171 - 43160012
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaaca-tatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||||||||||| ||||| |||||||||   ||||||||| ||| |||||||||||||||    
T  43160171 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaaatgtatagtttagggacgattttgttcgattt 43160072  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||||| |||||||||||| ||||||||  |||||||||| |||||||||    
T  43160071 aaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 43160012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 13399583 - 13399454
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| |||||||||| |||||    
T  13399583 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttccattta 13399484  T
Q  101 aaaaagatacgaccattttcgtgagttggt 130  Q
    ||| || || ||||| |||||||| |||||    
T  13399483 aaagaggtatgaccaatttcgtgaattggt 13399454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 63343 - 63509
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa------aacatatagtttaaggatgattttgttc 94  Q
    ||||||| |||||||| ||||| ||| | |||||||||||||| |||||||| ||||| |||||||      ||||||||||||| ||| |||||||||     
T  63343 actaaaactgtcatttatgtgcgtttctagagttggaaataggaagataggactaaaactgcaaaaaaaaaaaacatatagtttagggacgattttgttt 63442  T
Q  95 gatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||||||| ||||| ||||||||||||||||||||||||||   |||||||||| | |||||||||    
T  63443 gatttaaaagagataagaccattttcgtgagttggtcaaaatacaaggaccaaaaatataattaaac 63509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 24140064 - 24140217
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||| |||| | ||||| ||||||     ||||||||| ||| ||||||||| ||||||    
T  24140064 actaaaaatgtcatttctgtgcgtttctggagttggaaatagggatatagaactaaaactgcaaa-----tatagtttatggacgattttgtttgattta 24140158  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || ||||||||||||||||||||||| |||  |||| |||||||||||||||    
T  24140159 aaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaa 24140217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 9330209 - 9330340
Alignment:
Q  31 agttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttgg 129  Q
    ||||| ||||||| |||||||| ||||| ||||||| ||||||||||||  ||| ||||||||||||||||||| || || ||| | |||||||||||||    
T  9330209 agttgaaaataggtagataggactaaaactgcaaaaaaacatatagtttggggacgattttgttcgatttaaaagaggtatgacaaatttcgtgagttgg 9330308  T
Q  130 tcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||||||  ||||||||||||||||||||||    
T  9330309 tcaaaatgcaaggaccaaaagtgtaattaaac 9330340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 6949848 - 6949987
Alignment:
Q  22 catttttggagttggaaatagggagataggattaaaattgcaaaaaaca--tatagtttaaggatgattttgttcgatttaaaaaagatacgaccatttt 119  Q
    ||||| ||||||| |||||| |||||||||| ||||| ||||||||| |  ||||||||| ||| |||||||||| |||||||| |  || ||||| |||    
T  6949848 catttctggagtttgaaatatggagataggactaaaactgcaaaaaaaaaatatagtttagggacgattttgttctatttaaaagatgtaggaccaattt 6949947  T
Q  120 cgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  6949948 cgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 6949987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 649801 - 649880
Alignment:
Q  80 aggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  649801 aggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 649880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 31797166 - 31797320
Alignment:
Q  4 aaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaa 103  Q
    |||| |||||||| | ||| ||| | |||||| ||||||| || ||||| ||||| |||||||||||||||||||| ||| | ||||||||||||| |||    
T  31797166 aaaactgtcatttctctgcgtttctagagttgaaaatagg-aggtaggactaaaactgcaaaaaacatatagtttagggacggttttgttcgatttgaaa 31797264  T
Q  104 aagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     ||  | ||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  31797265 gaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaa 31797320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5560935 - 5561023
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattt 89  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| |||||    
T  5560935 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattt 5561023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 25336047 - 25336143
Alignment:
Q  63 aaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| ||||| |||| ||| ||||||||||||||||||| |  || ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  25336047 aaaaaatatataatttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 25336143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 28143416 - 28143572
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattta 100  Q
    |||||| |||||||| | ||| ||| |||||||| |||||||  | ||||| ||||| |||||||| ||| |||||||| ||| |||||||||||||||     
T  28143416 ctaaaactgtcatttctctgcgtttctggagttgaaaataggacg-taggactaaaactgcaaaaa-catgatagtttagggacgattttgttcgatttg 28143513  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| ||  | ||||||||||||||| |||||||||||  ||||||||||||| ||||||    
T  28143514 aaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaa 28143572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 9329974 - 9329913
Alignment:
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  9329974 aaaaaagataggaccatttttgtgagttggtcaaaattgtaggaccaaaagtgtaattaaac 9329913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 20495307 - 20495194
Alignment:
Q  49 aggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaa 147  Q
    ||||| |||| ||||||||| || |||||||| ||| ||||||||| ||||||||| ||  | || ||||||||||||||||||||||||  || |||||    
T  20495307 aggatcaaaagtgcaaaaaatatgatagtttagggacgattttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaatgcgagaaccaa 20495208  T
Q  148 aagtgtaattaaac 161  Q
    ||||| ||||||||    
T  20495207 aagtgaaattaaac 20495194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 14942248 - 14942389
Alignment:
Q  20 tgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa--cat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccat 116  Q
    ||||||| |||||||| |||||||  | ||||| ||||| |||||||||  ||| ||| |||| |||  |||||||||||||| ||| ||| | ||||||    
T  14942248 tgcatttctggagttgaaaataggatg-taggactaaaactgcaaaaaaaacatgataatttatggacaattttgttcgatttgaaagagacaagaccat 14942346  T
Q  117 tttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||||||  | ||||||||||||||||||    
T  14942347 tttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 14942389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 9329892 - 9329831
Alignment:
Q  101 aaaaagatacgaccattttcgtgagttgg-tcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||  |||||||||||||||| | |||||||| |||||||||||||||||||||||    
T  9329892 aaaaagatataaccattttcgtgagttagatcaaaatgataggaccaaaagtgtaattaaac 9329831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 5035975 - 5035903
Alignment:
Q  51 gattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgt 122  Q
    |||||||| ||||||||| || |||||||| ||| | ||||||||||||||||||||| | ||||||||||||    
T  5035975 gattaaaactgcaaaaaatatgatagtttagggacggttttgttcgatttaaaaaagacaggaccattttcgt 5035903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 3824179 - 3824253
Alignment:
Q  87 ttttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||||||||||| |  | ||||| |||||||||||||| ||||||  | |||||||||| |||||||||    
T  3824179 ttttgttcgatttaaaaagggcatgaccaatttcgtgagttggttaaaatgcgatgaccaaaagtataattaaac 3824253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 22445801 - 22445640
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa---catatagtttaaggatgattttgttcgat 97  Q
    ||||||| |||||||| ||||  ||| || ||||| |||||||||||||| | ||||| || ||||||   ||| || |||||||| | |||||||||||    
T  22445801 actaaaactgtcatttatgtgtgtttctgaagttgaaaatagggagatagtactaaaactgtaaaaaaaaacat-taatttaaggacggttttgttcgat 22445703  T
Q  98 ttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||| || | || ||||| |||  | ||||| ||||||||  || |||||||||||||||||||    
T  22445702 ttaataatggtatgaccaattttataagttgatcaaaatgcaag-accaaaagtgtaattaaac 22445640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 2190536 - 2190612
Alignment:
Q  76 tttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtg 152  Q
    |||| ||| ||||||||||||||| ||||||  | ||||| ||||||||| |||||||||||  | |||||||||||    
T  2190536 tttagggacgattttgttcgatttgaaaaaggcaggaccaatttcgtgagctggtcaaaatgcgatgaccaaaagtg 2190612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 3823029 - 3822923
Alignment:
Q  55 aaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 153  Q
    ||||||||||||||||| ||||| || |||    |||||||| |||||||| |  | || || |||| ||||||||| ||||||  ||||||||||||||    
T  3823029 aaaattgcaaaaaacatgatagtatagggagtgctttgttcggtttaaaaagggcaggatcaatttcatgagttggttaaaatgcgaggaccaaaagtgt 3822930  T
Q  154 aattaaa 160  Q
    |||||||    
T  3822929 aattaaa 3822923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43215870 - 43215805
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa 66  Q
    ||||||| |||||||| | | | |||||||||||| ||||||||||||| || ||||| |||||||    
T  43215870 actaaaactgtcatttctattcgtttttggagttgaaaatagggagatatgactaaaactgcaaaa 43215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 3e-57; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 21938724 - 21938564
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  21938724 actaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttatggacgattttgttcgattta 21938625  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||||||| || ||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  21938624 aaaaagataagatcattttcgtgagttgatcaaaatggtaagaccaaaagtgtaattaaac 21938564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 37505229 - 37505070
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||| |||||||||||||| ||||||||| |||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  37505229 actaaaactgtcatttctgttcatttttggagttgaaaatagggaaataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 37505130  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37505129 aaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 37505070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 34555765 - 34555925
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa--aacatatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||||||| || ||||| |||||||  ||||||||||||||||| ||||||||||||||    
T  34555765 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaacatatagtttaaggacgattttgttcgatt 34555864  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34555865 taaaaaagataggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaa 34555925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 9992316 - 9992157
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||  ||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||    
T  9992316 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggaccattttgttcgattta 9992217  T
Q  101 aaaaagatacgaccattttcgtgagttggtc-aaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  9992216 aaaaagataggaccatttccgtgagttggtcaaaaatggtaggaccaaaagtgtaattaa 9992157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 44954611 - 44954769
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||    
T  44954611 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttatggatgattttgtttgattta 44954710  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || || ||||||| ||||||||||||||||  ||||||||||||||||||||    
T  44954711 aaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaa 44954769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 16299067 - 16299224
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    |||||||||||||||| ||||| ||| |||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| |||||||||| | |||    
T  16299067 actaaaattgtcatttctgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttc-aatta 16299165  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| ||| ||||||||||| |||||| ||||||||||||||| |||||| |||||||    
T  16299166 aaaaaaataggaccattttcgcgagttgatcaaaatggtaggacaaaaagtataattaa 16299224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 10278935 - 10279090
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||  ||| |||||||||| ||| |||||||||| ||||| ||   ||||||||||||||||||| ||||||||||||||||    
T  10278935 actaaaactgtcatttctgtgtgtttctggagttggatatatggagataggactaaaactg---aaaacatatagtttaaggacgattttgttcgattta 10279031  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  10279032 aaaaagataggaccattttcgtgagttggtcaaaacggtaggatcaaaagtgtaattaa 10279090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 30786933 - 30786774
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    |||||||  ||||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  30786933 actaaaaccgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 30786834  T
Q  101 aaaaagatacgacc-attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || |||| |||||||||||||||||||||||  || |||||||||||||||||    
T  30786833 aaagaggtaggaccaattttcgtgagttggtcaaaatgcaagaaccaaaagtgtaattaa 30786774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 4080182 - 4080026
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||||||||| ||| | |||||||||||||||||||| || ||||| || ||||||||||||||||| ||| ||||||||||||||||    
T  4080182 actaaaactgtcatttttgtgcgtttctagagttggaaatagggagatatgactaaaactgtaaaaaacatatagtttagggacgattttgttcgattta 4080083  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 157  Q
    ||| || ||||| || ||||||||||||||||| |||  ||||||||||||||||||    
T  4080082 aaataggtacgatcaatttcgtgagttggtcaagatgcaaggaccaaaagtgtaatt 4080026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 9992542 - 9992698
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaa 102  Q
    ||||| |||||||| |  || ||| |||||||| |||||||||||||||| ||| | |||||||||||||||||||||| | ||||||||||||||||||    
T  9992542 taaaactgtcatttctacgcgtttctggagttgaaaatagggagataggactaatactgcaaaaaacatatagtttaagcacgattttgttcgatttaaa 9992641  T
Q  103 aaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||| |||||||||| |||||| |||||||||  ||||||||||||||||||||    
T  9992642 aaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaa 9992698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 10278710 - 10278551
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    |||||||||||||||| ||||| ||| |||||||| |||| ||||||||||| ||||| ||||||||| ||||||||||| ||| |||||||||||||||    
T  10278710 actaaaattgtcatttatgtgcgtttctggagttgcaaatggggagataggactaaaactgcaaaaaaacatatagtttagggacgattttgttcgattt 10278611  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || || || |||||||||||||||||||||  ||||||||||||||||||||    
T  10278610 aaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 10278551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 50305169 - 50305330
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaaca---tatagtttaaggatgattttgttcgattt 99  Q
    ||||| |||||||| ||||  ||| |||||||| ||||||||||||| || ||||| ||||||||| |   ||||||||||||| |||||||||||||||    
T  50305169 taaaactgtcatttatgtgtgtttatggagttgaaaatagggagatatgactaaaactgcaaaaaaaaatatatagtttaaggacgattttgttcgattt 50305268  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  50305269 aaaaaagataggaccattttcatgagttggttaaaatggtagaaccaaaagtgtaattaaac 50305330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 1837666 - 1837508
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||| ||||||||||||| || ||||| |||||||||||||||||||| |||  |||||||||||||||    
T  1837666 actaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatagtttagggacaattttgttcgattta 1837567  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| ||||| || || |||||||||||| ||||||||  ||||||||||||||||||||    
T  1837566 aaagagatatgatcaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaa 1837508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 52335895 - 52336053
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||||||| || ||||| ||||||||| |||||||||| ||| ||||||||||||||||    
T  52335895 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaatatagtttagggacgattttgttcgattta 52335994  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||| |||||||||||||||| ||| |||||||| ||||||||    
T  52335995 aaagaggtaggaccaatttcatgagttggtcaaaatgatagaaccaaaagagtaattaa 52336053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 17641749 - 17641913
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-----atagtttaaggatgattttgttcg 95  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| |      |||||||| ||| |||||||||||    
T  17641749 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaataaaaatagtttagggacgattttgttcg 17641848  T
Q  96 atttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 160  Q
    |||||||| || || |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  17641849 atttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaaa 17641913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 37421323 - 37421161
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa--catatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||| ||| || ||||| |||||||||  ||||||||||| ||| ||||||||||||||    
T  37421323 actaaaactgtcatttctgtgcgtttttggagttggaaatagggaaatatgactaaaactgcaaaaaaaacatatagtttagggacgattttgttcgatt 37421224  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||| || || ||||| |||||||| ||||||||||||  | ||||||||||||||||||||    
T  37421223 taaaagaggtaagaccaatttcgtgaattggtcaaaatgcaaagaccaaaagtgtaattaaac 37421161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 2868072 - 2867914
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||||||||||| || ||||||| ||| || ||||| ||||||||||||||||||||| ||  |||||||||||||||    
T  2868072 actaaaactgtcatttatgtgcgtttttggagttagagatagggaaatatgactaaaactgcaaaaaacatatagtttaacgacaattttgttcgattta 2867973  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| ||||| || ||||||||||||||||||||||||  | |||||||| |||||||||    
T  2867972 aaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgtaattaa 2867914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 2868093 - 2868251
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| ||||| || ||||| ||| ||||||||||||||||| |||| || ||||| ||||||||||||||||| || ||| ||||||||||||||||    
T  2868093 actaaaactgtcacttatgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtgtagggacgattttgttcgattta 2868192  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||||||||||| |||||||||||||  |||| |||||||||||||||    
T  2868193 aaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaagtgtaattaa 2868251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 44582218 - 44582060
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    |||||||||||||||| ||||| ||| |||||||||||| |  ||||||||| ||||| ||||||||||||||| ||||  || ||||||||||||||||    
T  44582218 actaaaattgtcatttatgtgcgtttatggagttggaaacaaagagataggactaaaactgcaaaaaacatataatttagagacgattttgttcgattta 44582119  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| |||||| ||||||||||||||  ||||||||||||||||||||    
T  44582118 aaagaggtaggaccaatttcgttagttggtcaaaatgtaaggaccaaaagtgtaattaa 44582060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 44954387 - 44954229
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| |||||||||||| || |||||| || ||||| ||||||||||||||| ||||| || ||||||||| ||||||    
T  44954387 actaaaactgtcatttctgtgcgtttctggagttggaaacagagagatacgactaaaactgcaaaaaacatataatttaaagacgattttgttggattta 44954288  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| || ||||||||||||||||||||||||||||  |||| |||| |||||||||    
T  44954287 aaaaaggtatgaccattttcgtgagttggtcaaaatgggtggacaaaaaatgtaattaa 44954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 8230026 - 8230186
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||| |||| || ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  8230026 actaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 8230125  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||| || ||  ||||||||||||| | ||||||||||  || ||||||| |||||||||||    
T  8230126 aaagaggtataaccattttcgtgaataggtcaaaatgcgagaaccaaaaatgtaattaaac 8230186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 44582442 - 44582602
Alignment:
Q  1 actaaaattgtcatttttgtgcattttt-ggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||| ||||| ||||| |||| || ||||||||||| | || ||||| ||||||| |||||||||||||| || ||||||||||||||    
T  44582442 actaaaactgtcatttctgtgcgttttttggagctgaaaatagggagacaagactaaaactgcaaaaaaacatatagtttaaagacgattttgttcgatt 44582541  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    | |||| |||| |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  44582542 tgaaaatgatatgaccattttcgtgagttgatcaaaatggtagaaccaaaagtgtaattaa 44582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 29439327 - 29439468
Alignment:
Q  22 catttttggagttggaaatagggagataggattaaaattgcaaaa--aacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccatttt 119  Q
    ||||| ||||||| |||||||| |||||||| ||||  |||||||  ||||||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  29439327 catttctggagtttgaaatagg-agataggactaaatctgcaaaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagataggatcatttt 29439425  T
Q  120 cgtgagttggtcaaaatggtaggaccaaaagtgtaattaaaca 162  Q
    ||||||||| |||||||||| |||||||||||| |||||||||    
T  29439426 cgtgagttgatcaaaatggtgggaccaaaagtgcaattaaaca 29439468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 37505453 - 37505610
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||| ||| |||||||||||||||| ||| ||||||||| | ||||    
T  37505453 actaaaactgtcatttttgtgcgtttttggagttgaaaatagggagataggactaaaactgc-aaaaacatatagtttatggacgattttgtttgtttta 37505551  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| ||||| || || ||||||||||||||||||||   |||||||||| | |||||||    
T  37505552 aaagagatatgatcaatttcgtgagttggtcaaaataaaaggaccaaaaatataattaa 37505610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 16298814 - 16298685
Alignment:
Q  30 gagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttgg 129  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||||| || || ||||| |||||||||||||    
T  16298814 gagttggaaataggtagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgg 16298715  T
Q  130 tcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||  ||| |||||| |||||||||    
T  16298714 tcaaaatgcaagggccaaaaatgtaattaa 16298685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 29439092 - 29438933
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| ||| |||||||||  ||||| || ||| |||||| ||||||||| ||||| ||||||||| ||| ||||||| ||| |||||||||||||||    
T  29439092 actaaaactgttatttttgtgtgttttttgaattgaaaatagagagataggactaaaactgcaaaaaaacatttagtttagggacgattttgttcgattt 29438993  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || || ||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  29438992 aaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 29438933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 443936 - 444094
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| || || ||| |||| |||||||||||||||||||| ||||| |||||||||||||||||||| | | ||||||||||||||||    
T  443936 actaaaactgtcatttatgcgcgtttatggaattggaaatagggagataggactaaaactgcaaaaaacatatagtttaggaacgattttgttcgattta 444035  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||| | |||||||||||||||||||||  | || ||||||| |||||||    
T  444036 aaagaggtatgacaaatttcgtgagttggtcaaaatgcaaagatcaaaagtataattaa 444094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 23340344 - 23340186
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| || || ||| |||||||||||||| ||||||| || ||||| ||||||||| |||||||||| |   ||||||||||||||||    
T  23340344 actaaaactgtcatttctgagcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaatatatagtttatgagcgattttgttcgattta 23340245  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| ||||| ||||| |||||||||||||||||||||  | || |||||||||||||||    
T  23340244 aaagagataggaccaatttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaa 23340186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 60 - 161
Target Start/End: Original strand, 37421388 - 37421490
Alignment:
Q  60 tgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaa-gatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 158  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  37421388 tgcaaaaatcatatagtttaaggacgattttgttcgatttaaaaaaagataggaccattttcgtgagttggtcaaaatggtatgactaaaagtgtaatta 37421487  T
Q  159 aac 161  Q
    |||    
T  37421488 aac 37421490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 34555542 - 34555382
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa--catatagtttaaggatgattttgttcgatt 98  Q
    ||||||| | |||||| ||||| ||| ||||||||||||||||||||||||| ||||| || ||||||  ||||||||||| ||| ||||||||||||||    
T  34555542 actaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaaacatatagtttagggacgattttgttcgatt 34555443  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| || ||  |||| ||||| ||||| |||||||||  ||||||||||||||||||||    
T  34555442 taaaagaggtagcaccaatttcgcgagttagtcaaaatgcaaggaccaaaagtgtaattaa 34555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 159
Target Start/End: Original strand, 30787245 - 30787341
Alignment:
Q  63 aaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||| || ||||||||||| |||||||||||||||    
T  30787245 aaaaaacatatagtttaaggacgattttgttcgattttaaaaagatatgaccattttcgtgagttgatctaaatggtaggatcaaaagtgtaattaa 30787341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 161
Target Start/End: Complemental strand, 39485184 - 39485066
Alignment:
Q  43 ggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtagg 142  Q
    |||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||| ||| || || ||||||||||||||| | |||||||||  |||    
T  39485184 ggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttgaaagaggtaggaccattttcgtgagctagtcaaaatgcgagg 39485085  T
Q  143 accaaaagtgtaattaaac 161  Q
    |||||||||||||||||||    
T  39485084 accaaaagtgtaattaaac 39485066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 17641526 - 17641403
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||| | ||||| | |||||||| ||||||||||| |  |||||||||||||||    
T  17641526 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaactaaaactacaaaaaacgtatagtttaagaacaattttgttcgattta 17641427  T
Q  101 aaaaagatacgaccattttcgtga 124  Q
    |||||| || ||||||||||||||    
T  17641426 aaaaaggtatgaccattttcgtga 17641403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 45048314 - 45048157
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaa 101  Q
    |||||| ||| |||| | ||| ||| |||||||| ||||| | || ||||| ||||| |||||||||||||||||||| ||| |||||||||| ||||||    
T  45048314 ctaaaactgttatttctatgcgtttctggagttgaaaatatg-aggtaggactaaaactgcaaaaaacatatagtttatggacgattttgttcaatttaa 45048216  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 160  Q
    || || ||  ||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  45048215 aagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaaa 45048157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 6224860 - 6224697
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaa--acatatagtttaaggatgattttgttcgatt 98  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||| |||||| || ||||| || |||||  | ||||| |||||||| ||||||||||||||    
T  6224860 actaaaactgtcatttatgtgcgtttctggagttggaaatagagagataagactaaaactgtaaaaaatatatataatttaaggacgattttgttcgatt 6224761  T
Q  99 taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaaca 162  Q
    |||||||   |  ||||||||  |||||||||||||||| ||||| ||||| ||||||||||||    
T  6224760 taaaaaaacaagaaccatttttatgagttggtcaaaatgataggatcaaaaatgtaattaaaca 6224697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 8229801 - 8229640
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgc---aaaaaacatatagtttaaggatgattttgttcgat 97  Q
    ||||||| |||||||| ||||| ||| ||||||| ||||||||||||||||| ||||| |||   |||||||||||||||||  || |||||| ||||||    
T  8229801 actaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaaaaacatatagtttagagacgattttattcgat 8229702  T
Q  98 ttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| |  ||  | ||||||||||||||| ||||||||  |||| |||||||||||||||    
T  8229701 ttaaaagatgtagaatcattttcgtgagttgatcaaaatgtgaggatcaaaagtgtaattaa 8229640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 23526811 - 23526665
Alignment:
Q  9 tgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagat 108  Q
    |||||||| ||||| |||||||||||| |||||||| |   ||| ||||| |||||||||   ||||| || ||||||||||||||||||||||| ||      
T  23526811 tgtcatttctgtgcgtttttggagttgaaaatagggggcagggactaaaactgcaaaaaaatgatagtctagggatgattttgttcgatttaaaagaggc 23526712  T
Q  109 acgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 155  Q
    | ||||||||||||||| |||||||||||  ||||||||||||||||    
T  23526711 aggaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaa 23526665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 50304532 - 50304442
Alignment:
Q  69 catatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||  || ||||||||||||||||||| || || |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  50304532 catatagtttagagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 50304442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 44802557 - 44802714
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattta 100  Q
    ||||||||||||||||| ||  ||| |||||||| ||||||| || ||| | ||||| |||||||||||| |||||||| ||| ||||||||||  |||     
T  44802557 ctaaaattgtcatttttctgtgtttctggagttgaaaatagg-aggtagaactaaaactgcaaaaaacatgatagtttagggacgattttgttccgtttg 44802655  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| ||  | ||||| ||||||||| |||||||||||  ||||||||||||||||||||    
T  44802656 aaagaggcatgaccactttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 44802714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 1744488 - 1744331
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgc-aaaaaacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||||||| || ||||| ||| |||||| |||||||||| ||| |||||| || || |     
T  1744488 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaatatatagtttagggacgattttatttgact- 1744390  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     |||||| || || ||||| |||||||| ||||||||   | ||||||||||||||||||    
T  1744389 -aaaaaggtaggatcatttacgtgagtttgtcaaaatacgaagaccaaaagtgtaattaa 1744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 29021041 - 29020906
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattt 99  Q
    ||||||| || ||||| ||||| ||||||||| || |||||||||| ||  | |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  29021041 actaaaactgacatttatgtgcgtttttggaggtgaaaatagggag-taacactaaaattgcaaaaaacatgataatttaaggatgattttgttcgattt 29020943  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaat 136  Q
    |||| ||| | |||||||||  |||| || |||||||    
T  29020942 aaaagagacatgaccatttttatgagctgatcaaaat 29020906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 45048548 - 45048680
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagt 126  Q
    |||||||| ||||||| || ||||| ||||| |||||||||||| |||||||| ||| | ||||||||||||  ||| || || ||||||||||||||      
T  45048548 tggagttgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagttta-ggacggttttgttcgattggaaagaggtatgaccattttcgtgaac 45048645  T
Q  127 tggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||||  ||||||||||||||||||||||    
T  45048646 tggtcaaaatgcgaggaccaaaagtgtaattaaac 45048680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 159
Target Start/End: Original strand, 50926653 - 50926784
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagtt 127  Q
    |||||||| |||||||| |  |||| ||||| |||||||||   |||||||| ||| | ||||||||||||| ||| |||   ||||||||||||||| |    
T  50926653 tggagttgaaaatagggggtaaggactaaaactgcaaaaaaatgatagtttagggacggttttgttcgatttgaaagagacgggaccattttcgtgagct 50926752  T
Q  128 ggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||  | ||||||||||||||||||    
T  50926753 ggtcaaaatgcgatgaccaaaagtgtaattaa 50926784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 9833537 - 9833670
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacata-tagtttaaggatgattttgttcgattt 99  Q
    ||||||| ||| |||| ||||| ||| |||||||| |||||||| | ||||| ||||| ||||||||||||| || |||| ||| |||||||||||||||    
T  9833537 actaaaaatgttatttctgtgcgtttctggagttgaaaataggggg-taggactaaaactgcaaaaaacataatattttagggacgattttgttcgattt 9833635  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaa 134  Q
     ||| ||  | ||| ||||||||||||||||||||    
T  9833636 gaaagaggcatgactattttcgtgagttggtcaaa 9833670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 17088577 - 17088682
Alignment:
Q  54 taaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgt 153  Q
    ||||| ||||||||| |||||||||| ||| | ||||||| ||||| ||| ||  | ||||||||||||||| || ||||||||  ||||||||||||||    
T  17088577 taaaactgcaaaaaatatatagtttagggacggttttgtttgatttgaaagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgt 17088676  T
Q  154 aattaa 159  Q
    ||||||    
T  17088677 aattaa 17088682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 25274863 - 25274760
Alignment:
Q  55 aaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgta 154  Q
    |||| |||||||||||| ||||||| | | | ||||||||||||| ||| ||  | ||||||||||||||| |||||||||||  ||||||||||||| |    
T  25274863 aaaaatgcaaaaaacatgtagtttaggaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgca 25274764  T
Q  155 atta 158  Q
    ||||    
T  25274763 atta 25274760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 159
Target Start/End: Complemental strand, 50926320 - 50926233
Alignment:
Q  72 atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| ||| ||||||||||||||| ||| || || ||  ||||||||||| |||||||||||| |||||||||| |||||||||    
T  50926320 atagtttagggacgattttgttcgatttgaaagaggtatgattattttcgtgagctggtcaaaatgggaggaccaaaactgtaattaa 50926233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 29021252 - 29021408
Alignment:
Q  4 aaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat--atagtttaaggatgattttgttcgatttaa 101  Q
    |||| |||||||| ||||| ||| |||||||| |||||||| | || || ||||| ||||||||||    ||| |||| ||| ||||||||||||||| |    
T  29021252 aaaactgtcatttatgtgcgtttctggagttgaaaataggggg-taagactaaaactgcaaaaaaccgtgataatttagggacgattttgttcgatttga 29021350  T
Q  102 aaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || ||  | || |||||||||||| |||||||||||  ||||||||||||| ||||||    
T  29021351 aagaggcatgaacattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaa 29021408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 23526936 - 23527073
Alignment:
Q  22 catttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcg 121  Q
    |||||||||||||| |||||||| |   ||| ||||| |||||||||   ||||||||  || | ||||||||||||||||||||  | ||||||||||     
T  23526936 catttttggagttgaaaatagggggcacggactaaaactgcaaaaaaatgatagtttagagacggttttgttcgatttaaaaaaggcatgaccattttca 23527035  T
Q  122 tgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || ||||||||  |||| ||||||| |||||||    
T  23527036 tgagctgatcaaaatgtgaggatcaaaagtataattaa 23527073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 44291401 - 44291304
Alignment:
Q  63 aaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||| ||| |||||||||| |||| ||| ||  |  |||||||||||||| |||||||||||  ||||||||||||| ||||||    
T  44291401 aaaaaacatgatagtttatggacgattttgttcaatttgaaagaggcataaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaa 44291304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 50419464 - 50419391
Alignment:
Q  88 tttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||||| ||||||| | ||||||||| ||||||||||  |||||  ||||||||||||| ||||||||    
T  50419464 tttgttcgatttgaaaaagacatgaccatttttgtgagttggtttaaatgcgaggaccaaaagtgcaattaaac 50419391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 44291723 - 44291856
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagt 126  Q
    |||||||| |||||||| | ||||| ||||| |||||||||||| ||||||    || |||||| |||||||||||| ||| | |||||||||| ||||     
T  44291723 tggagttgaaaataggggg-taggactaaaactgcaaaaaacatgatagttaggtgacgattttattcgatttaaaagagacatgaccattttcatgagc 44291821  T
Q  127 tggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||||||||   ||||| |||| || ||||||||    
T  44291822 tggtcaaaatacaaggactaaaaatgcaattaaac 44291856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 50304941 - 50304876
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa 68  Q
    |||||||| ||||||||||  ||| ||||||| |||||||||||||| || ||||| |||||||||    
T  50304941 taaaattgccatttttgtgtgtttatggagtttgaaatagggagatatgactaaaactgcaaaaaa 50304876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 17088310 - 17088149
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-----cat-atagtttaaggatgattttgttcg 95  Q
    |||||| || ||||| | ||||||| || ||||| ||||||| || ||||| |||||||||||||||     ||| |||||||| ||| | |||||||||    
T  17088310 ctaaaactgccatttctctgcatttctgaagttgaaaatagg-aggtaggactaaaattgcaaaaaaaaaaacatgatagttta-ggacggttttgttcg 17088213  T
Q  96 atttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| ||| ||  |  |||||||||||||| |||||||||||  | |||||| |||||||||||    
T  17088212 atttgaaagaggcaaaaccattttcgtgagctggtcaaaatgcgatgaccaacagtgtaattaa 17088149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 39843497 - 39843564
Alignment:
Q  89 ttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 156  Q
    ||||||||||| ||||||  | ||||| ||||||||||||||| |||||  |||||| ||||||||||    
T  39843497 ttgttcgatttgaaaaaggcaggaccaatttcgtgagttggtctaaatgcgaggaccgaaagtgtaat 39843564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 36229417 - 36229486
Alignment:
Q  54 taaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgt 122  Q
    ||||| |||||||||||| ||||||||||||| | ||||||| |||||| | ||| | ||||||||||||    
T  36229417 taaaactgcaaaaaacatgatagtttaaggatcagtttgttcaatttaatagagacaagaccattttcgt 36229486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 50419731 - 50419803
Alignment:
Q  87 ttttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| |||| ||||||  | ||||| ||||||||||||||| |||||  | ||||||||||| ||||||    
T  50419731 ttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaa 50419803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 1e-56; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 24640578 - 24640729
Alignment:
Q  9 tgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagat 108  Q
    |||||||| ||||| |||| ||||||||||||||||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24640578 tgtcatttctgtgcgttttcggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattttgttcgatttaaaaaagat 24640677  T
Q  109 acgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaa 160  Q
    | |||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  24640678 aggaccattttcgtgagttgatcaaaatggtaggaccaaaagtataattaaa 24640729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 25472397 - 25472556
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||| ||||| ||| ||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  25472397 actaaaactgtcatttctgtgcgtttctggagctggaaatagggagataggactaaaactgcaaaaaaacatatagtttaaggacgattttgttcgattt 25472496  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25472497 aaaaaagataagaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 25472556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 5114629 - 5114471
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||  ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||    
T  5114629 actaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcgattta 5114530  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||||    
T  5114529 aaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaa 5114471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 31574110 - 31574268
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    |||||||||||||||| ||||| ||| |||||||| ||||||||||||| || ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  31574110 actaaaattgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacatatagtttagggacgattttgttcgattta 31574209  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||| | |||||||||||||||||||||  ||||||||||||||||||||    
T  31574210 aaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 31574268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 5120856 - 5121012
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaa 102  Q
    ||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  5120856 taaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttagggacgattttgttcgatttaaa 5120955  T
Q  103 aaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    | || || ||  | |||||||||||||||||||||  ||||||||||||||||||||    
T  5120956 agaggtaggaataatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 5121012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 31073527 - 31073685
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||  |||||||||||||||    
T  31073527 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcacaaaacatatagtttagggacaattttgttcgattta 31073626  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || ||||| ||||||||| |||||||||||  ||||||||||||||||||||    
T  31073627 aaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaa 31073685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 30251084 - 30251235
Alignment:
Q  9 tgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaa-acatatagtttaaggatgattttgttcgatttaaaaaaga 107  Q
    |||||||| ||||| ||| |||||||||||||||||||||| || ||||| | |||||| ||| |||||||||||| |||||||||||||||||||||||    
T  30251084 tgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactacaaaaatacaaatagtttaaggacgattttgttcgatttaaaaaaga 30251183  T
Q  108 tacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    || ||| ||||| |||||||||||||||| |||||| |||||||||||||||    
T  30251184 tatgacaatttttgtgagttggtcaaaatagtaggatcaaaagtgtaattaa 30251235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 31573886 - 31573723
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa----catatagtttaaggatgattttgttcga 96  Q
    ||||||| |||||||| | ||| ||| ||||||||||||||||||||||||| ||||| |||||||||    ||||||||||||| | ||||||||||||    
T  31573886 actaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaaaacatatagtttaagaacgattttgttcga 31573787  T
Q  97 tttaaaaaaga-tacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| | || ||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  31573786 tttaaaaaaaaataggactattttcgtgagttggtcaaaatggtaggaccaaaagtataattaa 31573723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 25469010 - 25468850
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaa--aaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||| |||||||| ||||| ||| |||| ||  |||||||||||||||| ||||| |||||  ||||||||||||||| ||| ||||||||||||||||    
T  25469010 taaaactgtcatttctgtgcgtttctggaatttaaaatagggagataggactaaaactgcaagaaaaacatatagtttagggacgattttgttcgattta 25468911  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||| ||||| ||||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  25468910 aaagagatatgaccaatttcgtgagttggtcaaaatgtaaggaccaaaagtgtaattaaac 25468850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 29891465 - 29891627
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatt-- 98  Q
    ||||||| | |||||| ||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||| |||      
T  29891465 actaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacatatagtttaaggacgattttgttcaattta 29891564  T
Q  99 --taaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
      |||| || | | ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  29891565 aataaataaaaaaggaccattttcacgagttggtcaaaatggtaggaccaaaagtgtaattaa 29891627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 29891241 - 29891083
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgattta 100  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| | ||||||||| ||||    
T  29891241 actaaaactgtcatttatgtgcgtttctggagttggaaatagggagatagaattaaaattgtaaaaaacatatagtttagggacgcttttgttcggttta 29891142  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| || || || || |||||| |||| |||||||||  |||| |||||||||||||||    
T  29891141 aaagaggtatgatcaatttcgtaagttagtcaaaatgtaaggaacaaaagtgtaattaa 29891083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 28636435 - 28636295
Alignment:
Q  18 tgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccatt 117  Q
    ||||||||| |||||||||||||||||||||| || ||||| |||||||| ||||||||||| | | ||||||||||||||||||| |  || ||||| |    
T  28636435 tgtgcatttatggagttggaaatagggagatatgactaaaactgcaaaaa-catatagtttaggaacgattttgttcgatttaaaagaagtaagaccaat 28636337  T
Q  118 ttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||||||||||||||   | |||||||| |||||||||    
T  28636336 ttcgtgagttggtcaaaatacaatgaccaaaaatgtaattaa 28636295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 159
Target Start/End: Complemental strand, 31073284 - 31073146
Alignment:
Q  28 tggagttggaaatagggagataggattaaaattgcaaaaaaca-tatagtttaaggat------gattttgttcgatttaaaaaagatacgaccattttc 120  Q
    |||||||||||||||| ||||| || ||||| ||||||||| | |||||||||||||       ||||||||||||||||||||||||| ||||||||||    
T  31073284 tggagttggaaataggaagatatgactaaaactgcaaaaaataatatagtttaaggacttaaacgattttgttcgatttaaaaaagataggaccattttc 31073185  T
Q  121 gtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     || ||||||||||||   ||||||||||||||||||||    
T  31073184 atgtgttggtcaaaattaaaggaccaaaagtgtaattaa 31073146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28636581 - 28636669
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattt 89  Q
    ||||||| |||||||| ||||| ||| |||||||||||||||||||||| || ||||| |||||||||||||||||||||||| |||||    
T  28636581 actaaaactgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactgcaaaaaacatatagtttaaggacgattt 28636669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 35163572 - 35163730
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa--catatagtttaaggatgattttgttcgattt 99  Q
    |||||| |||||||| | ||  |||||||||||| ||||||| || ||||| ||||| |||||||||  ||||||||||| ||| ||||||||| |||||    
T  35163572 ctaaaactgtcatttctctgtgtttttggagttgaaaatagg-aggtaggactaaaactgcaaaaaaaacatatagtttagggacgattttgtttgattt 35163670  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
     ||| ||  |  |||||||||||||| |||||||||||   |||||||||||||||||||    
T  35163671 gaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaa 35163730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 48 - 159
Target Start/End: Original strand, 32836428 - 32836539
Alignment:
Q  48 taggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaa 147  Q
    ||||| ||||| ||||||||||||| |||||||| | | ||||||||||||| ||| ||  | ||||||||||||||| |||||||||||  ||||| ||    
T  32836428 taggactaaaactgcaaaaaacatacagtttaagaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggactaa 32836527  T
Q  148 aagtgtaattaa 159  Q
    ||||||||||||    
T  32836528 aagtgtaattaa 32836539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 161
Target Start/End: Complemental strand, 35163303 - 35163185
Alignment:
Q  43 ggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtag 141  Q
    |||| ||||| ||||| |||||||||||| |||||||| ||| | ||||||||||||| ||| ||| | ||||||||| ||||| |||||||||||  ||    
T  35163303 ggaggtaggactaaaactgcaaaaaacatgatagttta-ggacggttttgttcgatttgaaagagacaagaccatttttgtgagctggtcaaaatgcgag 35163205  T
Q  142 gaccaaaagtgtaattaaac 161  Q
    ||| ||||||||||||||||    
T  35163204 gactaaaagtgtaattaaac 35163185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 33095858 - 33095717
Alignment:
Q  18 tgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccat 116  Q
    ||||| ||||||||| || ||||||| || ||||| ||||| |||||||||||| |||||||| ||| | ||||||||||||| ||| || |  ||||||    
T  33095858 tgtgcgtttttggaggtgaaaatagg-aggtaggactaaaactgcaaaaaacatgatagtttagggacggttttgttcgatttgaaagaggtgagaccat 33095760  T
Q  117 tttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| ||| || | ||||||  ||||||||||||| ||||||    
T  33095759 tttcgcgagctgataaaaatgcgaggaccaaaagtgcaattaa 33095717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 33096009 - 33096154
Alignment:
Q  18 tgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaagga----tgattttgttcgatttaaaaaagatacga 112  Q
    ||||| ||||||||| || |||||||| | ||||| |||||||||||||||||| ||||||||||||    || ||||||||||||| ||| ||| | ||    
T  33096009 tgtgcgtttttggaggtgaaaataggggg-taggactaaaattgcaaaaaacatgatagtttaaggacagttggttttgttcgatttgaaagagacatga 33096107  T
Q  113 ccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| |||| |||| ||||||  | || |||||||| ||||||    
T  33096108 ccattttcatgagctggtaaaaatgcgaagaacaaaagtgcaattaa 33096154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 31242878 - 31242807
Alignment:
Q  90 tgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||||||||||||  | || ||||||||||||||||||||||||  |||  |||||||||||||||||    
T  31242878 tgttcgatttaaaaaaggcaggatcattttcgtgagttggtcaaaatgcgagggtcaaaagtgtaattaaac 31242807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 22534219 - 22534267
Alignment:
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  22534219 gaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaa 22534267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 835538 - 835397
Alignment:
Q  17 ttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccat 116  Q
    |||||| ||||||||| || |||||||| | ||||| ||||  |||||||||   |||||||| |||   ||||||||||||| ||| ||  | ||||||    
T  835538 ttgtgcgtttttggaggtgaaaataggggg-taggactaaagctgcaaaaaaatgatagtttagggacagttttgttcgatttgaaagaggcaagaccat 835440  T
Q  117 tttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||||||| || | ||||||  ||||||||||||| ||||||    
T  835439 tttcgtgagctgctaaaaatgtgaggaccaaaagtgcaattaa 835397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30250852 - 30250774
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagttta 79  Q
    ||||||| |||||||| ||||| ||| || |||||||||||||||||  ||| ||||  |||||||||| |||||||||    
T  30250852 actaaaactgtcatttctgtgcgtttctgtagttggaaatagggagaatggactaaagctgcaaaaaacttatagttta 30250774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 30250772 - 30250724
Alignment:
Q  111 gaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  30250772 gaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaa 30250724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 18297662 - 18297732
Alignment:
Q  89 ttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||| |||||||||||| | ||||| |||||||||||||| |||||   | ||| ||||||||||||||    
T  18297662 ttgttcaatttaaaaaagagatgaccaatttcgtgagttggttaaaattcgaagactaaaagtgtaattaa 18297732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 32836082 - 32836008
Alignment:
Q  87 ttttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    ||||||||||||| ||| ||  | |||| |||| ||||| |||||||||||  |||| |||||||||||||||||    
T  32836082 ttttgttcgatttgaaagaggcaggaccgtttttgtgagctggtcaaaatgcaaggatcaaaagtgtaattaaac 32836008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 231
Target Start/End: Complemental strand, 34638693 - 34638665
Alignment:
Q  203 tattacaatgtcaatttcaacaattaacc 231  Q
    |||||||||||||||||||||||||||||    
T  34638693 tattacaatgtcaatttcaacaattaacc 34638665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 4 - 159
Target Start/End: Original strand, 46655 - 46811
Alignment:
Q  4 aaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaa-aacatatagtttaaggatgattttgttcgatttaaa 102  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||| | ||||| | ||||| |||||||||||||| || ||||||||||||||||||    
T  46655 aaaattgtcatttatgtgcgtttttggagttggaaatagggtgatagaactaaaactacaaaaaaacatatagtttaaagacgattttgttcgatttaaa 46754  T
Q  103 aaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    | | ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46755 atatataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 46811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 46428 - 46269
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaa-catatagtttaaggatgattttgttcgattt 99  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||| || ||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  46428 actaaaactgtcatttttgtgcatttatggaattggaaatagggagatatgactaaaactgcaaaaaaacatatagtttagggatgattttgttcgattt 46329  T
Q  100 aaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||| || ||  ||||||||||| ||||||||||||||  ||||||||||||| ||||||    
T  46328 aaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaagtgcaattaa 46269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 6551 - 6395
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaa 102  Q
    ||||| |||||||| ||||| ||| || ||||||||||||| |||||||| ||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  6551 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaacatataatttaaggacgattttgttcgatttaaa 6452  T
Q  103 aaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||  ||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  6451 aaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaa 6395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 6776 - 6941
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagatagg----attaaaattgcaaaaaa-catatagtttaaggatgattttgttcg 95  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||||||||||    | ||||| ||||||||| ||| ||||||| | | |||||||||||    
T  6776 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttaggtacgattttgttcg 6875  T
Q  96 atttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||| |  || ||||| |||||| | ||||||||||||  ||||||||||| ||||||||||    
T  6876 atttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaaac 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 6569 - 6413
Alignment:
Q  3 taaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaa 102  Q
    ||||| |||||||| ||||| ||| || ||||||||||||| |||||||| ||||| ||||||||||||||| |||||||| ||||||||||||||||||    
T  6569 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaacatataatttaaggacgattttgttcgatttaaa 6470  T
Q  103 aaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||  ||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  6469 aaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaa 6413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 6794 - 6959
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagatagg----attaaaattgcaaaaaa-catatagtttaaggatgattttgttcg 95  Q
    ||||||| |||||||| ||||| ||| |||||||| |||||||||||||||    | ||||| ||||||||| ||| ||||||| | | |||||||||||    
T  6794 actaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatgtagtttaggtacgattttgttcg 6893  T
Q  96 atttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||| |  || ||||| |||||| | ||||||||||||  ||||||||||| ||||||||||    
T  6894 atttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaaac 6959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 78478 - 78400
Alignment:
Q  1 actaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacatatagttta 79  Q
    |||||||||||||||| | ||||||| ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  78478 actaaaattgtcatttctatgcatttctggagttggaaatagagagataggactaaaactgcaaaaaacatatagttta 78400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 205754 - 205910
Alignment:
Q  2 ctaaaattgtcatttttgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgattta 100  Q
    |||||| || ||||| | ||| |||||||||||| |||||||  | ||||| ||||| |||||||| ||| |||||||| ||| | |||||||||||||     
T  205754 ctaaaactgccatttctctgcgtttttggagttgaaaataggacg-taggactaaaactgcaaaaa-catgatagtttagggacggttttgttcgatttg 205851  T
Q  101 aaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    ||| ||  | |||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  205852 aaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaa 205910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 210793 - 210880
Alignment:
Q  72 atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 159  Q
    |||||||| ||| | ||||||||||||| ||| ||  | |||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  210793 atagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaa 210880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 205027 - 204929
Alignment:
Q  64 aaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaaac 161  Q
    |||||||| |||||||| |||  |||||||| ||||| ||| ||  | ||||||  ||||||| ||||||||||   ||||||||||||||||||||||    
T  205027 aaaaacatgatagtttagggacaattttgtttgatttgaaagaggaaggaccatagtcgtgagctggtcaaaatacaaggaccaaaagtgtaattaaac 204929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 504 - 608
Alignment:
Q  55 aaaattgcaaaaaacatatagtttaaggatgattttgttcgatttaaaaaagatacgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgta 154  Q
    |||| ||||||||||||||||||||  ||   ||||||||||||| ||| ||  | ||||||||||||||| | |||||||||  |||| ||||||||||    
T  504 aaaactgcaaaaaacatatagtttagagactgttttgttcgatttgaaagaggcaagaccattttcgtgagctcgtcaaaatgcgaggatcaaaagtgta 603  T
Q  155 attaa 159  Q
    |||||    
T  604 attaa 608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 159283 - 159408
Alignment:
Q  18 tgtgcatttttggagttggaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggatgattttgttcgatttaaaaaagatacgaccat 116  Q
    ||||| ||||||||| || |||||||| | || || ||||| ||||||||| || |||||||| | | ||||||||||||||| ||| ||| | ||||||    
T  159283 tgtgcgtttttggaggtgaaaataggggg-tatgactaaaactgcaaaaaatatgatagtttatgaacgattttgttcgatttgaaagagacatgaccat 159381  T
Q  117 tttcgtgagttggtcaaaatggtagga 143  Q
    |||||||||  ||| ||||||| ||||    
T  159382 tttcgtgagccggtaaaaatggaagga 159408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University